Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0009201

Physical Location & Seq

Genomic Coordinates Forward (+)

31255718 .. 31257845

Gene Structure 2128 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG181900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGGACTTCCATAACCATTTCAACACCACCAACAGGGCGGAAGCGGAGCGGTGGCTGAGCACCGCCGTGAAGCTACTGACGACACGTGACCTGCACGGGACCAAGAGCTTCGCGATCCGTGCCCGAGAGTCCGACCCGAGGCTGGGCGCCACCGACCAACTAATCGCCGTGGCCGACACGCTCCTCGCCGGAGAGTCACGGATCAACAACCAGCCCGACTGGTACGCGATTCTTCAACTGGCCCACCGCACTCACAGCCTTGAGCTCGTGGCGACTCAGTACCGTCGTCTCGCCCTTCTCCTCAACCCTCAGGCCAATCGGTTTCCTTACGCCGATCAGGCCTTCCGTCTTGTCTCCGAGGCCTGGACCGTGCTCTCAAACCCCTCCAAGAAGGCCCTCTACGACCACGACTTGAATATCTACTCCCGGTTCGACTCGCCTCCGCCCTCCTCCGGGTCAACTCAGTTGTTTGAAAGGCAGTTCTTGCAAATGCATGCACCACCGCCGCCGCTGCAACCACCGCAACAACCATTTCAACAGAGGCTGCAGCCACTTCAGCGGCCGCAGCAGCTGCAGGCTCAACCGTTTCCGCACCAATTACAACCGCAACCACTTGAGCAGAGACCACAACCGCCGCAACCGCCACCTCAGACACAAGAAAAGCGACAGCCGCCACCACCGCCGCCGCCGCCGCCGCAAAATCAACAATCACCACAGAAGCAGCAGCAGCAGCAGAATAAGCCAGTGAGAAAAAGCCCAAGGAAGAAGGACGGAAGAGTTGCCGGTGAGGGAGAAACGCCGAATCCTAACAATGTGGCTAACAATGTGACTGAGTTTGAATCAGAGTCAGCTGCCCCTCTCCCATCTGAGTCGCTTAGTACAACTCAGGTGCAAGCGGAGTCTGATTCCGGGAATTTCTGGACGGCATGCCCCTACTGTTATCACCTCTTTGAGTACTCGAGAGTTTATGAGGAGTGTATGCTTCGGTGTCAAAACTGTAAGAGGGCTTTCCATGCGGTGGTGATATCGACACCGCCTGTGATGGACAATGGGGAAGCAAATTTCTGCTGCTGGGCCTATTTCCCAATGGGGTTATCTGGGAGTGTTAAAGATACAGGAGGGTCATCTAACTGGACTCCCTTTTCAACTATGTTTGCTTGCCCTTTACCGGGTACTAAGAAGAAAGTTGGGAGACCTAAGAACGCTGCTGTGGGGTCAAGGGTTTACTACGATGATGATGACGCCTTTCTTGACATTTCCGATCCCAGTGAGGAATCCGATGATGAGTGGCAGAAGGATAAGAGGAGGAAGAAGAGAGCAGGAAGACCAAAAGGAAAAGCTTCCACTTCTAGAACCCCTGCAAGAGCTTCGGAGAGATTGAGGAAGGGGACTCAAAATGTTGGTGGGCAGGGCATGGTGAGTAATGGTGGGACACTGGGTGCTGTGTCTGCATCCAATGGGGAATCCAGTAAGAAGACAAGTGCTAGTGCAAGAAAGCGAGGTGCTGCTGCGTTGGGGAAATTGGATTTGAATGTGGAGTTTAGTAATAATGAGGTAGAGGAGCATGCTGCTCAGACAATGAGTGATGGGAACGGGACAGCAAATGGGGAGGAGGATAATATTGAAGGGATTGAGTTCTTCGAAGGTCTTGATGAGTTCTTAAGCAGTCTGCCCATACTCAATGTTGTTGGCAATGACAAGGTAAAGGCTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ

Protein Analysis

571

Amino Acids

63.35

Weight (kDa)

8.02

Isoelectric Point (pI)

58.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	73 - 135	4.4e-12	DnaJ domain
Zn_ribbon_20	PF23551	306 - 340	2.3e-07	Zinc beta-ribbon domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009201)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09540 AT5G64360 AT5G64360 AT5G64360 AT5G64360 AT5G64360 AT5G64360 AT5G64360
malus_domestica	MD10G1054200.v1.1
prunus_persica	Prupe.8G069000_v2.0.a1
pyrus_communis	pycom05g03930 pycom10g04110
rosa_chinensis	RchiOBHm_Chr6g0271111
rosa_laevigata	RLG00000013746
rosa_multiflora	Rmu_sc0005953.1_g000011
rosa_roxburghii	Rroxscaffold_7G00197300
rosa_rugosa	Rorug06G0058400
rosa_samantha	Rh6AG178300 Rh6BG181900 Rh6CG177400 Rh6DG169500
rosa_wichuraiana	Rw6G015230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	99
AccB1I	GGYRCC	1 cut(s)	146
AccB7I	CCANNNNNTGG	1 cut(s)	1018
AccBSI	CCGCTC	1 cut(s)	49
AccII	CGCG	2 cut(s)	113, 227
AclWI	GGATC	3 cut(s)	109, 209, 1256
AcoI	YGGCCR	2 cut(s)	171, 560
AcsI	RAATTY	2 cut(s)	913, 1060
AcuI	CTGAAG	1 cut(s)	539
AcvI	CACGTG	1 cut(s)	86
AcyI	GRCGYC	2 cut(s)	147, 1242
AdeI	CACNNNGTG	1 cut(s)	1439
AfaI	GTAC	5 cut(s)	224, 281, 880, 956, 1174
AflII	CTTAAG	1 cut(s)	1660
AflIII	ACRYGT	1 cut(s)	83
AgsI	TTSAA	9 cut(s)	22, 236, 415, 473, 536, 839, 1146, 1531, 1625
AjnI	CCWGG	1 cut(s)	362
AleI	CACNNNNGTG	1 cut(s)	65
AluBI	AGCT	7 cut(s)	73, 108, 265, 571, 851, 1340, 1367
AluI	AGCT	7 cut(s)	73, 108, 265, 571, 851, 1340, 1367
Alw21I	GWGCWC	3 cut(s)	62, 267, 375
Alw26I	GTCTC	4 cut(s)	293, 358, 616, 1186
AlwI	GGATC	3 cut(s)	109, 209, 1256
AlwNI	CAGNNNCTG	2 cut(s)	544, 571
Ama87I	CYCGRG	3 cut(s)	123, 136, 958
AoxI	GGCC	8 cut(s)	171, 240, 312, 339, 360, 393, 560, 1074
ApoI	RAATTY	2 cut(s)	913, 1060
Asp700I	GAANNNNTTC	1 cut(s)	1339
AspLEI	GCGC	1 cut(s)	149
AspS9I	GGNCC	5 cut(s)	99, 241, 366, 394, 1074
AsuC2I	CCSGG	4 cut(s)	427, 454, 910, 1170
AsuHPI	GGTGA	5 cut(s)	702, 797, 935, 1033, 1429
AsuII	TTCGAA	1 cut(s)	1641
AvaI	CYCGRG	3 cut(s)	123, 136, 958
AvaII	GGWCC	2 cut(s)	99, 366
AxyI	CCTNAGG	1 cut(s)	309
BaeGI	GKGCMC	1 cut(s)	124
BanI	GGYRCC	1 cut(s)	146
BanII	GRGCYC	1 cut(s)	267
BarI	GAAGNNNNNNTAC	2 cut(s)	383, 415
BauI	CACGAG	1 cut(s)	266
BbrPI	CACGTG	1 cut(s)	86
BbsI	GAAGAC	2 cut(s)	1330, 1481
Bbv12I	GWGCWC	3 cut(s)	62, 267, 375
BccI	CCATC	3 cut(s)	871, 1036, 1580
BceAI	ACGGC	3 cut(s)	50, 152, 939
BcgI	CGANNNNNNTGC	2 cut(s)	1350, 1384
BciT130I	CCWGG	1 cut(s)	364
BcnI	CCSGG	4 cut(s)	427, 454, 910, 1170
BcoDI	GTCTC	4 cut(s)	293, 358, 616, 1186
BfaI	CTAG	2 cut(s)	1350, 1485
BfmI	CTRYAG	2 cut(s)	545, 572
BfoI	RGCGCY	1 cut(s)	150
BfrI	CTTAAG	1 cut(s)	1660
BfuAI	ACCTGC	1 cut(s)	99
BglI	GCCNNNNNGGC	1 cut(s)	338
BlpI	GCTNAGC	1 cut(s)	56
BmcAI	AGTACT	1 cut(s)	956
Bme1390I	CCNGG	5 cut(s)	364, 427, 454, 910, 1170
Bme18I	GGWCC	2 cut(s)	99, 366
BmeT110I	CYCGRG	3 cut(s)	123, 136, 958
BmgT120I	GGNCC	5 cut(s)	99, 241, 366, 394, 1074
BmiI	GGNNCC	2 cut(s)	100, 148
BmrFI	CCNGG	5 cut(s)	364, 427, 454, 910, 1170
BmrI	ACTGGG	2 cut(s)	1260, 1445
BmsI	GCATC	1 cut(s)	1460
BmuI	ACTGGG	2 cut(s)	1260, 1445
BpiI	GAAGAC	2 cut(s)	1330, 1481
Bpu1102I	GCTNAGC	1 cut(s)	56
Bpu14I	TTCGAA	1 cut(s)	1641
BpuEI	CTTGAG	2 cut(s)	281, 635
BpuMI	CCSGG	4 cut(s)	427, 454, 910, 1170
BsaAI	YACGTR	1 cut(s)	86
BsaHI	GRCGYC	2 cut(s)	147, 1242
BsaI	GGTCTC	2 cut(s)	616, 1186
BsaJI	CCNNGG	4 cut(s)	137, 168, 357, 758
Bse118I	RCCGGY	1 cut(s)	782
Bse1I	ACTGG	7 cut(s)	224, 243, 743, 1136, 1266, 1440, 1467
Bse21I	CCTNAGG	1 cut(s)	309
Bse3DI	GCAATG	1 cut(s)	1699
BseBI	CCWGG	1 cut(s)	364
BseDI	CCNNGG	4 cut(s)	137, 168, 357, 758
BseGI	GGATG	1 cut(s)	1451
BseMI	GCAATG	1 cut(s)	1699
BseMII	CTCAG	9 cut(s)	47, 290, 323, 476, 662, 822, 858, 899, 1586
BseNI	ACTGG	7 cut(s)	224, 243, 743, 1136, 1266, 1440, 1467
BseRI	GAGGAG	7 cut(s)	173, 290, 439, 986, 1318, 1574, 1625
BseSI	GKGCMC	1 cut(s)	124
BseX3I	CGGCCG	1 cut(s)	560
BseYI	CCCAGC	2 cut(s)	142, 1071
BsgI	GTGCAG	1 cut(s)	77
Bsh1236I	CGCG	2 cut(s)	113, 227
Bsh1285I	CGRYCG	1 cut(s)	563
BshFI	GGCC	8 cut(s)	173, 242, 314, 341, 362, 395, 562, 1076
BshNI	GGYRCC	1 cut(s)	146
BsiEI	CGRYCG	1 cut(s)	563
BsiHKAI	GWGCWC	3 cut(s)	62, 267, 375
BsiHKCI	CYCGRG	3 cut(s)	123, 136, 958
BsiSI	CCGG	6 cut(s)	189, 427, 453, 783, 909, 1169
BslFI	GGGAC	4 cut(s)	112, 1402, 1444, 1609
BsmAI	GTCTC	4 cut(s)	293, 358, 616, 1186
BsmBI	CGTCTC	1 cut(s)	293
BsmFI	GGGAC	4 cut(s)	112, 1402, 1444, 1609
BsnI	GGCC	8 cut(s)	173, 242, 314, 341, 362, 395, 562, 1076
Bso31I	GGTCTC	2 cut(s)	616, 1186
BsoBI	CYCGRG	3 cut(s)	123, 136, 958
Bsp119I	TTCGAA	1 cut(s)	1641
Bsp1286I	GDGCHC	4 cut(s)	62, 124, 267, 375
Bsp143I	GATC	4 cut(s)	114, 201, 334, 1261
Bsp1720I	GCTNAGC	1 cut(s)	56
Bsp68I	TCGCGA	1 cut(s)	113
BspANI	GGCC	8 cut(s)	173, 242, 314, 341, 362, 395, 562, 1076
BspCNI	CTCAG	9 cut(s)	48, 289, 322, 475, 661, 823, 859, 898, 1585
BspFNI	CGCG	2 cut(s)	113, 227
BspLI	GGNNCC	2 cut(s)	100, 148
BspMAI	CTGCAG	2 cut(s)	549, 576
BspMI	ACCTGC	1 cut(s)	99
BspPI	GGATC	3 cut(s)	109, 209, 1256
BspT104I	TTCGAA	1 cut(s)	1641
BspT107I	GGYRCC	1 cut(s)	146
BspTI	CTTAAG	1 cut(s)	1660
BspTNI	GGTCTC	2 cut(s)	616, 1186
BsrBI	CCGCTC	1 cut(s)	49
BsrDI	GCAATG	1 cut(s)	1699
BsrFI	RCCGGY	1 cut(s)	782
BsrI	ACTGG	7 cut(s)	224, 243, 743, 1136, 1266, 1440, 1467
BssAI	RCCGGY	1 cut(s)	782
BssECI	CCNNGG	4 cut(s)	137, 168, 357, 758
BssMI	GATC	4 cut(s)	114, 201, 334, 1261
BssNI	GRCGYC	2 cut(s)	147, 1242
BssSI	CACGAG	1 cut(s)	266
BssT1I	CCWWGG	1 cut(s)	758
Bst2BI	CACGAG	1 cut(s)	266
Bst2UI	CCWGG	1 cut(s)	364
Bst4CI	ACNGT	5 cut(s)	284, 370, 585, 938, 998
Bst6I	CTCTTC	2 cut(s)	769, 1307
BstACI	GRCGYC	2 cut(s)	147, 1242
BstAFI	CTTAAG	1 cut(s)	1660
BstAPI	GCANNNNNTGC	2 cut(s)	484, 571
BstBAI	YACGTR	1 cut(s)	86
BstBI	TTCGAA	1 cut(s)	1641
BstC8I	GCNNGC	6 cut(s)	495, 576, 894, 928, 1159, 1566
BstDSI	CCRYGG	1 cut(s)	168
BstF5I	GGATG	1 cut(s)	1451
BstFNI	CGCG	2 cut(s)	113, 227
BstH2I	RGCGCY	1 cut(s)	150
BstHHI	GCGC	1 cut(s)	149
BstKTI	GATC	4 cut(s)	117, 204, 337, 1264
BstMAI	GTCTC	4 cut(s)	293, 358, 616, 1186
BstMBI	GATC	4 cut(s)	114, 201, 334, 1261
BstMCI	CGRYCG	1 cut(s)	563
BstNI	CCWGG	1 cut(s)	364
BstNSI	RCATGY	3 cut(s)	497, 930, 1568
BstSCI	CCNGG	5 cut(s)	362, 425, 452, 908, 1168
BstSFI	CTRYAG	2 cut(s)	545, 572
BstSLI	GKGCMC	1 cut(s)	124
BstUI	CGCG	2 cut(s)	113, 227
BstV2I	GAAGAC	2 cut(s)	1330, 1481
BstZI	CGGCCG	1 cut(s)	560
Bsu36I	CCTNAGG	1 cut(s)	309
BsuRI	GGCC	8 cut(s)	173, 242, 314, 341, 362, 395, 562, 1076
BtgI	CCRYGG	1 cut(s)	168
BtsCI	GGATG	1 cut(s)	1451
BtsIMutI	CAGTG	3 cut(s)	750, 1273, 1433
BtuMI	TCGCGA	1 cut(s)	113
BveI	ACCTGC	1 cut(s)	99
Cac8I	GCNNGC	6 cut(s)	495, 576, 894, 928, 1159, 1566
CaiI	CAGNNNCTG	2 cut(s)	544, 571
CciNI	GCGGCCGC	1 cut(s)	560
CfoI	GCGC	1 cut(s)	149
Cfr10I	RCCGGY	1 cut(s)	782
Cfr13I	GGNCC	5 cut(s)	99, 241, 366, 394, 1074
CseI	GACGC	1 cut(s)	1250
Csp6I	GTAC	5 cut(s)	223, 280, 879, 955, 1173
CviAII	CATG	5 cut(s)	494, 927, 1013, 1414, 1565
CviQI	GTAC	5 cut(s)	223, 280, 879, 955, 1173
DinI	GGCGCC	1 cut(s)	148
DpnI	GATC	4 cut(s)	116, 203, 336, 1263
DpnII	GATC	4 cut(s)	114, 201, 334, 1261
DraIII	CACNNNGTG	1 cut(s)	1439
EaeI	YGGCCR	2 cut(s)	171, 560
EagI	CGGCCG	1 cut(s)	560
Eam1104I	CTCTTC	2 cut(s)	769, 1307
EarI	CTCTTC	2 cut(s)	769, 1307
EciI	GGCGGA	2 cut(s)	53, 432
Ecl136II	GAGCTC	1 cut(s)	265
EclXI	CGGCCG	1 cut(s)	560
Eco130I	CCWWGG	1 cut(s)	758
Eco147I	AGGCCT	2 cut(s)	341, 362
Eco24I	GRGCYC	1 cut(s)	267
Eco31I	GGTCTC	2 cut(s)	616, 1186
Eco32I	GATATC	1 cut(s)	1026
Eco47I	GGWCC	2 cut(s)	99, 366
Eco52I	CGGCCG	1 cut(s)	560
Eco53kI	GAGCTC	1 cut(s)	265
Eco57I	CTGAAG	1 cut(s)	539
Eco72I	CACGTG	1 cut(s)	86
Eco81I	CCTNAGG	1 cut(s)	309
Eco88I	CYCGRG	3 cut(s)	123, 136, 958
EcoICRI	GAGCTC	1 cut(s)	265
EcoO109I	RGGNCCY	1 cut(s)	394
EcoRII	CCWGG	1 cut(s)	362
EcoRV	GATATC	1 cut(s)	1026
EcoT14I	CCWWGG	1 cut(s)	758
EcoT22I	ATGCAT	1 cut(s)	495
EcoT38I	GRGCYC	1 cut(s)	267
EgeI	GGCGCC	1 cut(s)	148
EheI	GGCGCC	1 cut(s)	148
ErhI	CCWWGG	1 cut(s)	758
Esp3I	CGTCTC	1 cut(s)	293
FaeI	CATG	5 cut(s)	497, 930, 1016, 1417, 1568
FaqI	GGGAC	4 cut(s)	112, 1402, 1444, 1609
FatI	CATG	5 cut(s)	493, 926, 1012, 1413, 1564
FokI	GGATG	1 cut(s)	1438
FriOI	GRGCYC	1 cut(s)	267
FspBI	CTAG	2 cut(s)	1350, 1485
GlaI	GCGC	1 cut(s)	148
GsaI	CCCAGC	2 cut(s)	146, 1075
HaeII	RGCGCY	1 cut(s)	150
HaeIII	GGCC	8 cut(s)	173, 242, 314, 341, 362, 395, 562, 1076
HapII	CCGG	6 cut(s)	189, 427, 453, 783, 909, 1169
HgaI	GACGC	1 cut(s)	1250
HhaI	GCGC	1 cut(s)	149
Hin1I	GRCGYC	2 cut(s)	147, 1242
Hin1II	CATG	5 cut(s)	497, 930, 1016, 1417, 1568
Hin6I	GCGC	1 cut(s)	147
HinP1I	GCGC	1 cut(s)	147
HincII	GTYRAC	1 cut(s)	459
HindII	GTYRAC	1 cut(s)	459
HindIII	AAGCTT	1 cut(s)	1338
HpaII	CCGG	6 cut(s)	189, 427, 453, 783, 909, 1169
HphI	GGTGA	5 cut(s)	702, 797, 935, 1033, 1429
Hpy166II	GTNNAC	2 cut(s)	459, 1225
Hpy188III	TCNNGA	6 cut(s)	112, 919, 960, 1250, 1350, 1649
Hpy8I	GTNNAC	2 cut(s)	459, 1225
Hpy99I	CGWCG	1 cut(s)	288
HpyAV	CCTTC	8 cut(s)	305, 352, 385, 760, 1288, 1378, 1619, 1637
HpyCH4III	ACNGT	5 cut(s)	284, 370, 585, 938, 998
HpyCH4IV	ACGT	1 cut(s)	85
HpySE526I	ACGT	1 cut(s)	85
Hsp92I	GRCGYC	2 cut(s)	147, 1242
Hsp92II	CATG	5 cut(s)	497, 930, 1016, 1417, 1568
HspAI	GCGC	1 cut(s)	147
KasI	GGCGCC	1 cut(s)	146
Kzo9I	GATC	4 cut(s)	114, 201, 334, 1261
LmnI	GCTCC	3 cut(s)	46, 186, 1561
LweI	GCATC	1 cut(s)	1460
MaeI	CTAG	2 cut(s)	1350, 1485
MaeII	ACGT	1 cut(s)	85
MaeIII	GTNAC	3 cut(s)	86, 195, 826
MalI	GATC	4 cut(s)	116, 203, 336, 1263
MbiI	CCGCTC	1 cut(s)	49
MboI	GATC	4 cut(s)	114, 201, 334, 1261
MboII	GAAGA	9 cut(s)	224, 775, 786, 1192, 1321, 1324, 1335, 1486, 1630
MhlI	GDGCHC	4 cut(s)	62, 124, 267, 375
MluCI	AATT	5 cut(s)	596, 913, 1060, 1520, 1711
Mly113I	GGCGCC	1 cut(s)	147
MlyI	GAGTC	9 cut(s)	137, 203, 268, 428, 854, 878, 908, 1129, 1384
MmeI	TCCRAC	1 cut(s)	156
Mph1103I	ATGCAT	1 cut(s)	495
MroXI	GAANNNNTTC	1 cut(s)	1339
MseI	TTAA	2 cut(s)	1107, 1661
MslI	CAYNNNNRTG	1 cut(s)	65
MspA1I	CMGCKG	4 cut(s)	511, 559, 571, 851
MspCI	CTTAAG	1 cut(s)	1660
MspI	CCGG	6 cut(s)	189, 427, 453, 783, 909, 1169
MspR9I	CCNGG	5 cut(s)	364, 427, 454, 910, 1170
MvaI	CCWGG	1 cut(s)	364
MvnI	CGCG	2 cut(s)	113, 227
NarI	GGCGCC	1 cut(s)	147
NciI	CCSGG	4 cut(s)	427, 454, 910, 1170
NdeII	GATC	4 cut(s)	114, 201, 334, 1261
NlaIII	CATG	5 cut(s)	497, 930, 1016, 1417, 1568
NlaIV	GGNNCC	2 cut(s)	100, 148
NmuCI	GTSAC	3 cut(s)	86, 195, 826
NotI	GCGGCCGC	1 cut(s)	560
NruI	TCGCGA	1 cut(s)	113
NsiI	ATGCAT	1 cut(s)	495
NspI	RCATGY	3 cut(s)	497, 930, 1568
NspV	TTCGAA	1 cut(s)	1641
OliI	CACNNNNGTG	1 cut(s)	65
PaeI	GCATGC	3 cut(s)	497, 930, 1568
PaeR7I	CTCGAG	1 cut(s)	958
PceI	AGGCCT	2 cut(s)	341, 362
PcsI	WCGNNNNNNNCGW	1 cut(s)	171
PdmI	GAANNNNTTC	1 cut(s)	1339
PfeI	GAWTC	6 cut(s)	229, 802, 839, 905, 1274, 1463
PflMI	CCANNNNNTGG	1 cut(s)	1018
PfoI	TCCNGGA	1 cut(s)	908
PleI	GAGTC	9 cut(s)	136, 202, 268, 428, 853, 877, 907, 1129, 1384
PluTI	GGCGCC	1 cut(s)	150
PmaCI	CACGTG	1 cut(s)	86
PmlI	CACGTG	1 cut(s)	86
PpsI	GAGTC	9 cut(s)	136, 202, 268, 428, 853, 877, 907, 1129, 1384
Ppu21I	YACGTR	1 cut(s)	86
Psp124BI	GAGCTC	1 cut(s)	267
Psp6I	CCWGG	1 cut(s)	362
PspCI	CACGTG	1 cut(s)	86
PspFI	CCCAGC	2 cut(s)	142, 1071
PspGI	CCWGG	1 cut(s)	362
PspN4I	GGNNCC	2 cut(s)	100, 148
PspPI	GGNCC	5 cut(s)	99, 241, 366, 394, 1074
PstI	CTGCAG	2 cut(s)	549, 576
PstNI	CAGNNNCTG	2 cut(s)	544, 571
PvuII	CAGCTG	2 cut(s)	571, 851
RruI	TCGCGA	1 cut(s)	113
RsaI	GTAC	5 cut(s)	224, 281, 880, 956, 1174
RsaNI	GTAC	5 cut(s)	223, 280, 879, 955, 1173
RseI	CAYNNNNRTG	1 cut(s)	65
SacI	GAGCTC	1 cut(s)	267
SaqAI	TTAA	2 cut(s)	1107, 1661
Sau3AI	GATC	4 cut(s)	114, 201, 334, 1261
Sau96I	GGNCC	5 cut(s)	99, 241, 366, 394, 1074
ScaI	AGTACT	1 cut(s)	956
SchI	GAGTC	9 cut(s)	137, 203, 268, 428, 854, 878, 908, 1129, 1384
ScrFI	CCNGG	5 cut(s)	364, 427, 454, 910, 1170
SduI	GDGCHC	4 cut(s)	62, 124, 267, 375
SfaNI	GCATC	1 cut(s)	1460
SfcI	CTRYAG	2 cut(s)	545, 572
SfoI	GGCGCC	1 cut(s)	148
Sfr274I	CTCGAG	1 cut(s)	958
SfuI	TTCGAA	1 cut(s)	1641
SinI	GGWCC	2 cut(s)	99, 366
SlaI	CTCGAG	1 cut(s)	958
SmiMI	CAYNNNNRTG	1 cut(s)	65
SmlI	CTYRAG	4 cut(s)	260, 614, 958, 1660
SmoI	CTYRAG	4 cut(s)	260, 614, 958, 1660
SphI	GCATGC	3 cut(s)	497, 930, 1568
Sse9I	AATT	5 cut(s)	596, 913, 1060, 1520, 1711
SseBI	AGGCCT	2 cut(s)	341, 362
SspDI	GGCGCC	1 cut(s)	146
SspI	AATATT	1 cut(s)	1621
SspMI	CTAG	2 cut(s)	1350, 1485
SstI	GAGCTC	1 cut(s)	267
StuI	AGGCCT	2 cut(s)	341, 362
StyD4I	CCNGG	5 cut(s)	362, 425, 452, 908, 1168
StyI	CCWWGG	1 cut(s)	758
TaaI	ACNGT	5 cut(s)	284, 370, 585, 938, 998
TaiI	ACGT	1 cut(s)	88
TaqI	TCGA	4 cut(s)	432, 959, 1028, 1641
TasI	AATT	5 cut(s)	596, 913, 1060, 1520, 1711
TatI	WGTACW	2 cut(s)	878, 954
TfiI	GAWTC	6 cut(s)	229, 802, 839, 905, 1274, 1463
Tru1I	TTAA	2 cut(s)	1107, 1661
Tru9I	TTAA	2 cut(s)	1107, 1661
TscAI	CASTG	3 cut(s)	750, 1273, 1440
TseFI	GTSAC	3 cut(s)	86, 195, 826
Tsp45I	GTSAC	3 cut(s)	86, 195, 826
TspGWI	ACGGA	4 cut(s)	107, 214, 335, 786
TspRI	CASTG	3 cut(s)	750, 1273, 1440
Van91I	CCANNNNNTGG	1 cut(s)	1018
Vha464I	CTTAAG	1 cut(s)	1660
VpaK11BI	GGWCC	2 cut(s)	99, 366
XapI	RAATTY	2 cut(s)	913, 1060
XbaI	TCTAGA	1 cut(s)	1349
XceI	RCATGY	3 cut(s)	497, 930, 1568
XhoI	CTCGAG	1 cut(s)	958
XmnI	GAANNNNTTC	1 cut(s)	1339
XspI	CTAG	2 cut(s)	1350, 1485
ZrmI	AGTACT	1 cut(s)	956
Zsp2I	ATGCAT	1 cut(s)	495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.