Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002854

Physical Location & Seq

Genomic Coordinates Forward (+)

33741055 .. 33744072

Gene Structure 3018 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ24500

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGGGTTTGAGGAAAATGGGTTCCATGCTAGGGCTCTTAGGGATCTTTCTCCTGGATGGGCTACTCCTGTCCATGGCTTATAACGTTCATCGCTATAGCTTTATTCTGAAGGAGACCAATTTCACGAGACTATGTACCACAAAGCCAATGCTGACTGTAAATGGGCAGTTCCCAGGTCCAACCATCACTGTTCGCAAAGGAGATAGAGCTTTTGTTAATGTCCACAACAATGGCAAATATGGTGTCACCATTCACTGGCATGGAGTAAAGCAGCCACAAAACCCATGGTCAGATGGTCCAGAAAACATTACGCAATGTCCTATTCAGCCAGGAAAAAACTTTACCTATGAAGTCATATTTTCAGATGAAGAAGGAACTCTATGGTGGCATGCACATAGTGACTGGTCACGTGCCACCGTTCATGGCCCTATTGTTATTTTACCCGAGAGAGGAAAATCTTATCCATTTCCTAAGCCTTATGCAGAGAAAACCATTGTGCTTGCTTCATGGTTCAATACTGACGTGAAGGAACTAATCGATGACGCCATGGCAATCGGAGGAGACCCAGATCCGTCCGATGCTTTCACCATCAATGGCTGGCCAGGAGCTTTATATAACTGTTCCAATGAAACTATATCTCGTCTGCCAGTTGTGTTCGGAATGACCTACCTGCTTCGCCTAGTCAGTGCCGTCATGAACGAAGAAATGTTTATCGCAATTGCCGGACACAACTTCACAGTGGTGGCTCAAGATGGTGCATACATCAAGCCCATACCGACCAGCTACATAATGATAACTCCCGGCCAAACCATGGATATTTTACTAACAGCGAACCAGCCACCCAGCTACTACTACATGGCTGCTAGGCCATTTTTCGAATCGGGAGCTCCCTTTGACAACACCACAACTACAGCCATTCTCCAATACACAAACGTAATTGCTGCCCCGACTAATATTTCCATGCCAACACTTCCGATTCAAACAGACCACGACTCTGCAGATAACTTCACAAGCAAGATAAAGGCCTTGGCAAGCAGGGACCATCCAATTAGTGTACCGAAAAATGTTACCAAACAAGTCCTCATCACAGTTTCTGTGAATCAGCTACCTTGTGAACTTGGTGCTGGCTTATGTGGTGGTCCAAATGGTAATAGGATTTCTGCCAGCTTGAACAATATCAGTTTTGATACCCCAACCACTGATATACTGCAAGCATACTACAGGAGTTTACCTAATGTCTTCGACAGTGATTTCCCGGATCAACCGCCACTTTTCTTTAACTTCTCAGGGGTTAATTCATCAACTTATTTGTTACCAGAAGTCGGGACAAAGGTGTTATTGATCGAGTACGGGGCATCAGTTGAAATTGTGTTCCAAGGGACTAATGTCGGAAATCCAGAAAACCATCCAATGCATCTGCATGGTTACAGCTTCTATGTTGTTGGATCAGCTTATGGAAACTGGAATGAGACCACTTCTCCGGCCACTTACAACTTGATCGATCCACCAGCGGTCAACACTGTCGGAGTTCCTAAGAATGGATGGACTGCCATTCGCTTTGTTGCCGATAATCCTGGAGTATGGTTTATGCATTGTCATTTGGAACGTCATGCCAGTTGGGGAATGGACACAGTACTCATTGTGAAGAATGGATCGAGCAAGAGAGGAACCAGTATTCGCCGACCGCCTAGAAACTTGCCAATTTGTGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

570

Amino Acids

62.82

Weight (kDa)

6.24

Isoelectric Point (pI)

34.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	37 - 149	1.8e-41	Multicopper oxidase
Cu-oxidase	PF00394	163 - 311	6.5e-37	Multicopper oxidase
Cu-oxidase_2	PF07731	419 - 551	2.9e-39	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002854)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20010 FvH4_1g20010 FvH4_1g20010 FvH4_1g20010 FvH4_1g20010 FvH4_2g12570 FvH4_2g12570 FvH4_2g12590
rosa_chinensis	RchiOBHm_Chr2g0111951 RchiOBHm_Chr6g0273101 RchiOBHm_Chr6g0273121 RchiOBHm_Chr6g0273151
rosa_laevigata	RLG00000013635 RLG00000013637 RLG00000013641 RLG00000013642 RLG00000013643 RLG00000017941
rosa_multiflora	Rmu_sc0000239.1_g000097 Rmu_sc0000239.1_g000109 Rmu_sc0000239.1_g000114 Rmu_sc0005679.1_g000003
rosa_roxburghii	Rroxscaffold_2G00131960 Rroxscaffold_7G00195580 Rroxscaffold_7G00195630 Rroxscaffold_7G00195660
rosa_rugosa	Rorug02G0177500 Rorug06G0073000 Rorug06G0073100
rosa_samantha	Rh2CG233900 Rh2DG237500 Rh6BG191800 Rh6BG192000 Rh6CG191000 Rh6DG182600
rosa_wichuraiana	Rw2G017790 Rw6G016320 Rw6G016330 Rw6G016380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	81
Acc36I	ACCTGC	1 cut(s)	678
AccB7I	CCANNNNNTGG	3 cut(s)	255, 811, 1706
AciI	CCGC	3 cut(s)	1265, 1511, 1685
AclI	AACGTT	1 cut(s)	84
AclWI	GGATC	6 cut(s)	50, 563, 1266, 1453, 1496, 1660
AcoI	YGGCCR	3 cut(s)	599, 802, 1482
AcuI	CTGAAG	1 cut(s)	128
AcvI	CACGTG	1 cut(s)	410
AcyI	GRCGYC	1 cut(s)	543
AdeI	CACNNNGTG	1 cut(s)	398
AfaI	GTAC	4 cut(s)	136, 1056, 1349, 1635
AfiI	CCNNNNNNNGG	8 cut(s)	30, 73, 255, 449, 811, 1322, 1538, 1706
AgsI	TTSAA	4 cut(s)	514, 980, 1171, 1364
AjiI	CACGTC	1 cut(s)	523
AjnI	CCWGG	5 cut(s)	51, 172, 328, 601, 1573
AleI	CACNNNNGTG	1 cut(s)	740
AloI	GAACNNNNNNTCC	1 cut(s)	36
Alw21I	GWGCWC	1 cut(s)	889
Alw26I	GTCTC	4 cut(s)	107, 121, 555, 1463
AlwI	GGATC	6 cut(s)	50, 563, 1266, 1453, 1496, 1660
AlwNI	CAGNNNCTG	1 cut(s)	1094
Ama87I	CYCGRG	1 cut(s)	443
AoxI	GGCC	6 cut(s)	424, 599, 802, 866, 1023, 1482
ApeKI	GCWGC	3 cut(s)	271, 860, 941
ArsI	GACNNNNNNTTYG	2 cut(s)	228, 260
AspS9I	GGNCC	5 cut(s)	176, 296, 425, 1039, 1139
AsuC2I	CCSGG	2 cut(s)	801, 1256
AsuHPI	GGTGA	2 cut(s)	238, 577
AsuII	TTCGAA	1 cut(s)	876
AvaI	CYCGRG	1 cut(s)	443
AvaII	GGWCC	4 cut(s)	176, 296, 1039, 1139
BalI	TGGCCA	1 cut(s)	601
BanII	GRGCYC	2 cut(s)	36, 889
BauI	CACGAG	1 cut(s)	124
BbrPI	CACGTG	1 cut(s)	410
BbsI	GAAGAC	1 cut(s)	1231
Bbv12I	GWGCWC	1 cut(s)	889
BbvI	GCAGC	3 cut(s)	283, 847, 928
BccI	CCATC	8 cut(s)	50, 191, 287, 596, 746, 1050, 1413, 1536
BceAI	ACGGC	1 cut(s)	674
BciT130I	CCWGG	5 cut(s)	53, 174, 330, 603, 1575
BcnI	CCSGG	2 cut(s)	801, 1256
BcoDI	GTCTC	4 cut(s)	107, 121, 555, 1463
BfaI	CTAG	4 cut(s)	29, 680, 864, 1689
BfmI	CTRYAG	4 cut(s)	94, 909, 996, 1219
BfuAI	ACCTGC	1 cut(s)	678
BisI	GCNGC	3 cut(s)	272, 861, 942
BlsI	GCNGC	3 cut(s)	273, 862, 943
BmcAI	AGTACT	1 cut(s)	1635
Bme1390I	CCNGG	7 cut(s)	53, 174, 330, 603, 801, 1256, 1575
Bme18I	GGWCC	4 cut(s)	176, 296, 1039, 1139
BmeT110I	CYCGRG	1 cut(s)	443
BmgBI	CACGTC	1 cut(s)	523
BmgT120I	GGNCC	5 cut(s)	176, 296, 425, 1039, 1139
BmiI	GGNNCC	3 cut(s)	22, 1040, 1669
BmrFI	CCNGG	7 cut(s)	53, 174, 330, 603, 801, 1256, 1575
BmsI	GCATC	3 cut(s)	568, 1364, 1423
BoxI	GACNNNNGTC	1 cut(s)	1385
BpiI	GAAGAC	1 cut(s)	1231
BpmI	CTGGAG	1 cut(s)	1596
Bpu10I	CCTNAGC	1 cut(s)	471
Bpu14I	TTCGAA	1 cut(s)	876
BpuEI	CTTGAG	1 cut(s)	732
BpuMI	CCSGG	2 cut(s)	801, 1256
Bsa29I	ATCGAT	2 cut(s)	537, 1500
BsaAI	YACGTR	1 cut(s)	410
BsaHI	GRCGYC	1 cut(s)	543
BsaI	GGTCTC	3 cut(s)	107, 555, 1463
BsaJI	CCNNGG	7 cut(s)	72, 172, 284, 546, 810, 1026, 1375
BsaXI	ACNNNNNCTCC	2 cut(s)	1462, 1492
Bsc4I	CCNNNNNNNGG	8 cut(s)	30, 73, 255, 449, 811, 1322, 1538, 1706
Bse1I	ACTGG	6 cut(s)	260, 407, 647, 1466, 1614, 1671
Bse3DI	GCAATG	1 cut(s)	320
BseBI	CCWGG	5 cut(s)	53, 174, 330, 603, 1575
BseCI	ATCGAT	2 cut(s)	537, 1500
BseDI	CCNNGG	7 cut(s)	72, 172, 284, 546, 810, 1026, 1375
BseGI	GGATG	4 cut(s)	61, 1042, 1405, 1547
BseLI	CCNNNNNNNGG	8 cut(s)	30, 73, 255, 449, 811, 1322, 1538, 1706
BseMI	GCAATG	1 cut(s)	320
BseMII	CTCAG	1 cut(s)	1299
BseNI	ACTGG	6 cut(s)	260, 407, 647, 1466, 1614, 1671
BseRI	GAGGAG	1 cut(s)	573
BseXI	GCAGC	3 cut(s)	283, 847, 928
BseYI	CCCAGC	1 cut(s)	842
Bsh1285I	CGRYCG	1 cut(s)	1685
BshFI	GGCC	6 cut(s)	426, 601, 804, 868, 1025, 1484
BshVI	ATCGAT	2 cut(s)	537, 1500
BsiEI	CGRYCG	1 cut(s)	1685
BsiHKAI	GWGCWC	1 cut(s)	889
BsiHKCI	CYCGRG	1 cut(s)	443
BsiSI	CCGG	4 cut(s)	723, 801, 1256, 1481
BslFI	GGGAC	3 cut(s)	1052, 1339, 1393
BslI	CCNNNNNNNGG	8 cut(s)	30, 73, 255, 449, 811, 1322, 1538, 1706
BsmAI	GTCTC	4 cut(s)	107, 121, 555, 1463
BsmFI	GGGAC	3 cut(s)	1052, 1339, 1393
BsnI	GGCC	6 cut(s)	426, 601, 804, 868, 1025, 1484
Bso31I	GGTCTC	3 cut(s)	107, 555, 1463
BsoBI	CYCGRG	1 cut(s)	443
Bsp119I	TTCGAA	1 cut(s)	876
Bsp1286I	GDGCHC	2 cut(s)	36, 889
Bsp143I	GATC	8 cut(s)	42, 568, 1258, 1341, 1445, 1497, 1501, 1652
Bsp19I	CCATGG	4 cut(s)	72, 284, 546, 810
BspACI	CCGC	3 cut(s)	1265, 1511, 1685
BspANI	GGCC	6 cut(s)	426, 601, 804, 868, 1025, 1484
BspCNI	CTCAG	1 cut(s)	1298
BspDI	ATCGAT	2 cut(s)	537, 1500
BspHI	TCATGA	1 cut(s)	693
BspLI	GGNNCC	3 cut(s)	22, 1040, 1669
BspMAI	CTGCAG	1 cut(s)	1000
BspMI	ACCTGC	1 cut(s)	678
BspPI	GGATC	6 cut(s)	50, 563, 1266, 1453, 1496, 1660
BspT104I	TTCGAA	1 cut(s)	876
BspTNI	GGTCTC	3 cut(s)	107, 555, 1463
BsrDI	GCAATG	1 cut(s)	320
BsrI	ACTGG	6 cut(s)	260, 407, 647, 1466, 1614, 1671
BssECI	CCNNGG	7 cut(s)	72, 172, 284, 546, 810, 1026, 1375
BssMI	GATC	8 cut(s)	42, 568, 1258, 1341, 1445, 1497, 1501, 1652
BssNI	GRCGYC	1 cut(s)	543
BssSI	CACGAG	1 cut(s)	124
BssT1I	CCWWGG	6 cut(s)	72, 284, 546, 810, 1026, 1375
Bst2BI	CACGAG	1 cut(s)	124
Bst2UI	CCWGG	5 cut(s)	53, 174, 330, 603, 1575
Bst4CI	ACNGT	9 cut(s)	157, 190, 418, 620, 739, 1090, 1247, 1522, 1633
BstACI	GRCGYC	1 cut(s)	543
BstBAI	YACGTR	1 cut(s)	410
BstBI	TTCGAA	1 cut(s)	876
BstC8I	GCNNGC	7 cut(s)	390, 501, 599, 1033, 1126, 1165, 1212
BstDEI	CTNAG	4 cut(s)	37, 471, 1285, 1533
BstDSI	CCRYGG	4 cut(s)	72, 284, 546, 810
BstF5I	GGATG	4 cut(s)	61, 1042, 1405, 1547
BstKTI	GATC	8 cut(s)	45, 571, 1261, 1344, 1448, 1500, 1504, 1655
BstMAI	GTCTC	4 cut(s)	107, 121, 555, 1463
BstMBI	GATC	8 cut(s)	42, 568, 1258, 1341, 1445, 1497, 1501, 1652
BstMCI	CGRYCG	1 cut(s)	1685
BstNI	CCWGG	5 cut(s)	53, 174, 330, 603, 1575
BstNSI	RCATGY	1 cut(s)	392
BstPAI	GACNNNNGTC	1 cut(s)	1385
BstSCI	CCNGG	7 cut(s)	51, 172, 328, 601, 799, 1254, 1573
BstSFI	CTRYAG	4 cut(s)	94, 909, 996, 1219
BstV1I	GCAGC	3 cut(s)	283, 847, 928
BstV2I	GAAGAC	1 cut(s)	1231
BstX2I	RGATCY	2 cut(s)	42, 568
BstXI	CCANNNNNNTGG	1 cut(s)	230
BstYI	RGATCY	2 cut(s)	42, 568
Bsu15I	ATCGAT	2 cut(s)	537, 1500
BsuRI	GGCC	6 cut(s)	426, 601, 804, 868, 1025, 1484
BsuTUI	ATCGAT	2 cut(s)	537, 1500
BtgI	CCRYGG	4 cut(s)	72, 284, 546, 810
BtgZI	GCGATG	1 cut(s)	74
BtrI	CACGTC	1 cut(s)	523
BtsCI	GGATG	4 cut(s)	61, 1042, 1405, 1547
BtsIMutI	CAGTG	7 cut(s)	186, 253, 691, 744, 1197, 1252, 1518
BveI	ACCTGC	1 cut(s)	678
Cac8I	GCNNGC	7 cut(s)	390, 501, 599, 1033, 1126, 1165, 1212
CaiI	CAGNNNCTG	1 cut(s)	1094
CciI	TCATGA	1 cut(s)	693
Cfr13I	GGNCC	5 cut(s)	176, 296, 425, 1039, 1139
ClaI	ATCGAT	2 cut(s)	537, 1500
CseI	GACGC	1 cut(s)	551
Csp6I	GTAC	4 cut(s)	135, 1055, 1348, 1634
CviQI	GTAC	4 cut(s)	135, 1055, 1348, 1634
DdeI	CTNAG	4 cut(s)	37, 471, 1285, 1533
DpnI	GATC	8 cut(s)	44, 570, 1260, 1343, 1447, 1499, 1503, 1654
DpnII	GATC	8 cut(s)	42, 568, 1258, 1341, 1445, 1497, 1501, 1652
DraIII	CACNNNGTG	1 cut(s)	398
EaeI	YGGCCR	3 cut(s)	599, 802, 1482
Ecl136II	GAGCTC	1 cut(s)	887
Eco130I	CCWWGG	6 cut(s)	72, 284, 546, 810, 1026, 1375
Eco147I	AGGCCT	1 cut(s)	1025
Eco24I	GRGCYC	2 cut(s)	36, 889
Eco31I	GGTCTC	3 cut(s)	107, 555, 1463
Eco47I	GGWCC	4 cut(s)	176, 296, 1039, 1139
Eco53kI	GAGCTC	1 cut(s)	887
Eco57I	CTGAAG	1 cut(s)	128
Eco72I	CACGTG	1 cut(s)	410
Eco88I	CYCGRG	1 cut(s)	443
EcoICRI	GAGCTC	1 cut(s)	887
EcoRII	CCWGG	5 cut(s)	51, 172, 328, 601, 1573
EcoT14I	CCWWGG	6 cut(s)	72, 284, 546, 810, 1026, 1375
EcoT22I	ATGCAT	2 cut(s)	1416, 1593
EcoT38I	GRGCYC	2 cut(s)	36, 889
ErhI	CCWWGG	6 cut(s)	72, 284, 546, 810, 1026, 1375
FaqI	GGGAC	3 cut(s)	1052, 1339, 1393
Fnu4HI	GCNGC	3 cut(s)	272, 861, 942
FokI	GGATG	4 cut(s)	68, 1029, 1392, 1554
FriOI	GRGCYC	2 cut(s)	36, 889
Fsp4HI	GCNGC	3 cut(s)	272, 861, 942
FspBI	CTAG	4 cut(s)	29, 680, 864, 1689
GluI	GCNGC	3 cut(s)	272, 861, 942
GsaI	CCCAGC	1 cut(s)	846
GsuI	CTGGAG	1 cut(s)	1596
HaeIII	GGCC	6 cut(s)	426, 601, 804, 868, 1025, 1484
HapII	CCGG	4 cut(s)	723, 801, 1256, 1481
HgaI	GACGC	1 cut(s)	551
Hin1I	GRCGYC	1 cut(s)	543
HincII	GTYRAC	1 cut(s)	1516
HindII	GTYRAC	1 cut(s)	1516
HinfI	GANTC	4 cut(s)	878, 976, 992, 1099
HpaII	CCGG	4 cut(s)	723, 801, 1256, 1481
HphI	GGTGA	2 cut(s)	238, 577
Hpy166II	GTNNAC	5 cut(s)	223, 1055, 1115, 1229, 1516
Hpy188I	TCNGA	9 cut(s)	108, 292, 364, 557, 577, 659, 975, 1391, 1526
Hpy188III	TCNNGA	7 cut(s)	124, 299, 694, 749, 882, 1324, 1397
Hpy8I	GTNNAC	5 cut(s)	223, 1055, 1115, 1229, 1516
HpyAV	CCTTC	3 cut(s)	103, 365, 520
HpyCH4III	ACNGT	9 cut(s)	157, 190, 418, 620, 739, 1090, 1247, 1522, 1633
HpyCH4IV	ACGT	5 cut(s)	84, 409, 522, 933, 1606
HpyCH4V	TGCA	8 cut(s)	392, 482, 758, 998, 1210, 1414, 1420, 1591
HpyF3I	CTNAG	4 cut(s)	37, 471, 1285, 1533
HpySE526I	ACGT	5 cut(s)	84, 409, 522, 933, 1606
Hsp92I	GRCGYC	1 cut(s)	543
Kzo9I	GATC	8 cut(s)	42, 568, 1258, 1341, 1445, 1497, 1501, 1652
LmnI	GCTCC	3 cut(s)	605, 884, 892
Lsp1109I	GCAGC	3 cut(s)	283, 847, 928
LweI	GCATC	3 cut(s)	568, 1364, 1423
MaeI	CTAG	4 cut(s)	29, 680, 864, 1689
MaeII	ACGT	5 cut(s)	84, 409, 522, 933, 1606
MaeIII	GTNAC	6 cut(s)	244, 398, 405, 1066, 1311, 1424
MalI	GATC	8 cut(s)	44, 570, 1260, 1343, 1447, 1499, 1503, 1654
MboI	GATC	8 cut(s)	42, 568, 1258, 1341, 1445, 1497, 1501, 1652
MboII	GAAGA	4 cut(s)	380, 713, 1231, 1657
MfeI	CAATTG	1 cut(s)	717
MflI	RGATCY	2 cut(s)	42, 568
MhlI	GDGCHC	2 cut(s)	36, 889
MlsI	TGGCCA	1 cut(s)	601
MluCI	AATT	7 cut(s)	118, 717, 936, 1047, 1294, 1365, 1701
MluNI	TGGCCA	1 cut(s)	601
MlyI	GAGTC	1 cut(s)	986
MmeI	TCCRAC	4 cut(s)	203, 1369, 1423, 1504
MnlI	CCTC	5 cut(s)	3, 443, 551, 1091, 1658
Mox20I	TGGCCA	1 cut(s)	601
Mph1103I	ATGCAT	2 cut(s)	1416, 1593
MscI	TGGCCA	1 cut(s)	601
MseI	TTAA	4 cut(s)	216, 1278, 1293, 1711
MslI	CAYNNNNRTG	4 cut(s)	228, 258, 740, 1419
Msp20I	TGGCCA	1 cut(s)	601
MspA1I	CMGCKG	1 cut(s)	1511
MspI	CCGG	4 cut(s)	723, 801, 1256, 1481
MspR9I	CCNGG	7 cut(s)	53, 174, 330, 603, 801, 1256, 1575
MunI	CAATTG	1 cut(s)	717
MvaI	CCWGG	5 cut(s)	53, 174, 330, 603, 1575
NciI	CCSGG	2 cut(s)	801, 1256
NcoI	CCATGG	4 cut(s)	72, 284, 546, 810
NdeII	GATC	8 cut(s)	42, 568, 1258, 1341, 1445, 1497, 1501, 1652
NlaIV	GGNNCC	3 cut(s)	22, 1040, 1669
NmuCI	GTSAC	3 cut(s)	244, 398, 405
NsiI	ATGCAT	2 cut(s)	1416, 1593
NspI	RCATGY	1 cut(s)	392
NspV	TTCGAA	1 cut(s)	876
OliI	CACNNNNGTG	1 cut(s)	740
PaeI	GCATGC	1 cut(s)	392
PagI	TCATGA	1 cut(s)	693
PceI	AGGCCT	1 cut(s)	1025
PfeI	GAWTC	3 cut(s)	878, 976, 1099
PflMI	CCANNNNNTGG	3 cut(s)	255, 811, 1706
PfoI	TCCNGGA	3 cut(s)	51, 1254, 1573
PkrI	GCNGC	3 cut(s)	273, 862, 943
PleI	GAGTC	1 cut(s)	986
PmaCI	CACGTG	1 cut(s)	410
PmlI	CACGTG	1 cut(s)	410
PpsI	GAGTC	1 cut(s)	986
Ppu21I	YACGTR	1 cut(s)	410
PshAI	GACNNNNGTC	1 cut(s)	1385
PsiI	TTATAA	1 cut(s)	81
Psp124BI	GAGCTC	1 cut(s)	889
Psp1406I	AACGTT	1 cut(s)	84
Psp6I	CCWGG	5 cut(s)	51, 172, 328, 601, 1573
PspCI	CACGTG	1 cut(s)	410
PspFI	CCCAGC	1 cut(s)	842
PspGI	CCWGG	5 cut(s)	51, 172, 328, 601, 1573
PspN4I	GGNNCC	3 cut(s)	22, 1040, 1669
PspPI	GGNCC	5 cut(s)	176, 296, 425, 1039, 1139
PstI	CTGCAG	1 cut(s)	1000
PstNI	CAGNNNCTG	1 cut(s)	1094
PsuI	RGATCY	2 cut(s)	42, 568
RsaI	GTAC	4 cut(s)	136, 1056, 1349, 1635
RsaNI	GTAC	4 cut(s)	135, 1055, 1348, 1634
RseI	CAYNNNNRTG	4 cut(s)	228, 258, 740, 1419
SacI	GAGCTC	1 cut(s)	889
SaqAI	TTAA	4 cut(s)	216, 1278, 1293, 1711
SatI	GCNGC	3 cut(s)	272, 861, 942
Sau3AI	GATC	8 cut(s)	42, 568, 1258, 1341, 1445, 1497, 1501, 1652
Sau96I	GGNCC	5 cut(s)	176, 296, 425, 1039, 1139
ScaI	AGTACT	1 cut(s)	1635
SchI	GAGTC	1 cut(s)	986
ScrFI	CCNGG	7 cut(s)	53, 174, 330, 603, 801, 1256, 1575
SduI	GDGCHC	2 cut(s)	36, 889
SfaNI	GCATC	3 cut(s)	568, 1364, 1423
SfcI	CTRYAG	4 cut(s)	94, 909, 996, 1219
SfuI	TTCGAA	1 cut(s)	876
SinI	GGWCC	4 cut(s)	176, 296, 1039, 1139
SmiMI	CAYNNNNRTG	4 cut(s)	228, 258, 740, 1419
SmlI	CTYRAG	1 cut(s)	747
SmoI	CTYRAG	1 cut(s)	747
SphI	GCATGC	1 cut(s)	392
Sse9I	AATT	7 cut(s)	118, 717, 936, 1047, 1294, 1365, 1701
SseBI	AGGCCT	1 cut(s)	1025
SsiI	CCGC	3 cut(s)	1265, 1511, 1685
SspI	AATATT	1 cut(s)	955
SspMI	CTAG	4 cut(s)	29, 680, 864, 1689
SstI	GAGCTC	1 cut(s)	889
StuI	AGGCCT	1 cut(s)	1025
StyD4I	CCNGG	7 cut(s)	51, 172, 328, 601, 799, 1254, 1573
StyI	CCWWGG	6 cut(s)	72, 284, 546, 810, 1026, 1375
TaaI	ACNGT	9 cut(s)	157, 190, 418, 620, 739, 1090, 1247, 1522, 1633
TaiI	ACGT	5 cut(s)	87, 412, 525, 936, 1609
TaqI	TCGA	6 cut(s)	537, 876, 1242, 1344, 1500, 1655
TasI	AATT	7 cut(s)	118, 717, 936, 1047, 1294, 1365, 1701
TatI	WGTACW	1 cut(s)	1633
TfiI	GAWTC	3 cut(s)	878, 976, 1099
Tru1I	TTAA	4 cut(s)	216, 1278, 1293, 1711
Tru9I	TTAA	4 cut(s)	216, 1278, 1293, 1711
TscAI	CASTG	7 cut(s)	193, 260, 691, 744, 1204, 1252, 1525
TseFI	GTSAC	3 cut(s)	244, 398, 405
TseI	GCWGC	3 cut(s)	271, 860, 941
Tsp45I	GTSAC	3 cut(s)	244, 398, 405
TspDTI	ATGAA	8 cut(s)	77, 363, 381, 410, 495, 642, 710, 1287
TspGWI	ACGGA	1 cut(s)	561
TspRI	CASTG	7 cut(s)	193, 260, 691, 744, 1204, 1252, 1525
Van91I	CCANNNNNTGG	3 cut(s)	255, 811, 1706
VpaK11BI	GGWCC	4 cut(s)	176, 296, 1039, 1139
XceI	RCATGY	1 cut(s)	392
XcmI	CCANNNNNNNNNTGG	2 cut(s)	282, 1621
XspI	CTAG	4 cut(s)	29, 680, 864, 1689
ZrmI	AGTACT	1 cut(s)	1635
Zsp2I	ATGCAT	2 cut(s)	1416, 1593

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.