Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005679.1

Orthogroup ID

OG0002854

Physical Location & Seq

Genomic Coordinates Forward (+)

12369 .. 15014

Gene Structure 2646 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005679.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

atggaagttaagaaaatgctagggcttctcttagggatcttcttcctcgatgggctgttcctcctctccgcggcttctaacgtccaccactacagctttatactgaaggagacgaactttacaagactatgtttcgaaaagccgatgctcactgtaaatgagcagttcccaggaccaactattcatgttcgcaaaggagatactgcttttgttaatgttcacaatgatggcaaatatggtatcaccattcactggcatggagtgaagcaaccaaataatccatggtcagatggtccagaaaacatcactcagtgcccgattcagcctggaaaaaacttcacttatgaggtcatattttcagatgaagaaggcaccctatggtggcatgcgcatagtgactggtcacgtgctacagtccatggtcacatcgttatcttacctgagataggaaagacttatccatttcccgaaccttacgctgagcaaacaatttttcttgcatcgtggttcaatactgatgtgaaggaactaattgataacgccacactaattggaggtgacccagacccatcggatggatttacgatcaacggctggccaggagctttatacaattgctccaatgaaaccatatccacttttggagttgaatacggcaagacctatctttttcgtctagtgaacggtgtgatgaacgaagaaatgttctttggaattgccggacacaacttcaccgtggtagctcaagacgcagcatacatcaagcccatagtaacaagctacataatgattactcccggccaaaccatggacattctactaacagcagaccagtctccaagttcctactacattgcagccaacccattctttgactcaaacgctccattcgacaataccaccaccacagctattctccagtacacaaacgcaaccgccccatcgtctattccttttccttcacttccctcgacgaccgacaaagaatctgcagataacttcacaagcaagataaaggctttggcaagcgaggaacatccgattagtgtgcctcaaaatattaccaaaagaatcttcatcacagtttccgtgaatcagctaccttgtgatcttgttaatggcacttgtgggggtcctaatggtaataggctggctgctagcttgaacaatatcagtttctctacccccactactgatatactgcaacaatactacagcatgttgaatgatactagctttgacaccgattttcctagtcaaccagctgtgttattcaacttcacaggggatgatgcagacgattatatactgccagaagtagggacgaaggcgaaattggttgagtacggggcatcggttgaaattgtgtaccaagggactaatattgggaatgcagaaaaccatccgatgcatttgcatggttatagcttctatgtcgtcggcgcagcttatggcaattggaatgagaccacttctccagacacttacaacttgatagatccaccggaagtcaacaccatcggagttcctaagaatggatggacttccattcgattcgttgctaacaatcctggagtgtggtttatgcattgtcatttggaacgtcatgctagttggggcatgaacacagtacttattgtgaagaatggacccaccaatgataccaagatccgacgaccccctccaaacttaccaatctgtgtctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

568

Amino Acids

62.9

Weight (kDa)

5.0

Isoelectric Point (pI)

34.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002854)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20010 FvH4_1g20010 FvH4_1g20010 FvH4_1g20010 FvH4_1g20010 FvH4_2g12570 FvH4_2g12570 FvH4_2g12590
rosa_chinensis	RchiOBHm_Chr2g0111951 RchiOBHm_Chr6g0273101 RchiOBHm_Chr6g0273121 RchiOBHm_Chr6g0273151
rosa_laevigata	RLG00000013635 RLG00000013637 RLG00000013641 RLG00000013642 RLG00000013643 RLG00000017941
rosa_multiflora	Rmu_sc0000239.1_g000097 Rmu_sc0000239.1_g000109 Rmu_sc0000239.1_g000114 Rmu_sc0005679.1_g000003
rosa_roxburghii	Rroxscaffold_2G00131960 Rroxscaffold_7G00195580 Rroxscaffold_7G00195630 Rroxscaffold_7G00195660
rosa_rugosa	Rorug02G0177500 Rorug06G0073000 Rorug06G0073100
rosa_samantha	Rh2CG233900 Rh2DG237500 Rh6BG191800 Rh6BG192000 Rh6CG191000 Rh6DG182600
rosa_wichuraiana	Rw2G017790 Rw6G016320 Rw6G016330 Rw6G016380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	390
AccB1I	GGYRCC	1 cut(s)	371
AccB7I	CCANNNNNTGG	3 cut(s)	252, 575, 808
AccII	CGCG	1 cut(s)	71
AciI	CCGC	3 cut(s)	69, 71, 936
AclWI	GGATC	3 cut(s)	44, 1493, 1663
AcoI	YGGCCR	2 cut(s)	596, 799
AcuI	CTGAAG	1 cut(s)	125
AcvI	CACGTG	1 cut(s)	407
AdeI	CACNNNGTG	1 cut(s)	312
AfaI	GTAC	4 cut(s)	923, 1346, 1370, 1632
AfiI	CCNNNNNNNGG	8 cut(s)	70, 252, 381, 446, 575, 808, 1319, 1535
AgsI	TTSAA	6 cut(s)	511, 650, 1165, 1225, 1276, 1361
AjnI	CCWGG	4 cut(s)	169, 325, 598, 1570
AjuI	GAANNNNNNNTTGG	6 cut(s)	693, 725, 1058, 1090, 1319, 1351
Alw26I	GTCTC	3 cut(s)	104, 840, 1460
AlwI	GGATC	3 cut(s)	44, 1493, 1663
AoxI	GGCC	2 cut(s)	596, 799
ApeKI	GCWGC	4 cut(s)	752, 857, 1154, 1445
AspLEI	GCGC	2 cut(s)	391, 1445
AspS9I	GGNCC	4 cut(s)	173, 293, 1133, 1649
AsuC2I	CCSGG	1 cut(s)	798
AsuHPI	GGTGA	3 cut(s)	235, 569, 724
AsuII	TTCGAA	1 cut(s)	135
AsuNHI	GCTAGC	1 cut(s)	1157
AvaII	GGWCC	4 cut(s)	173, 293, 1133, 1649
BaeGI	GKGCMC	1 cut(s)	317
BalI	TGGCCA	1 cut(s)	598
BanI	GGYRCC	1 cut(s)	371
BbrPI	CACGTG	1 cut(s)	407
BbvI	GCAGC	4 cut(s)	764, 869, 1141, 1457
BccI	CCATC	9 cut(s)	44, 221, 284, 569, 577, 949, 1410, 1526, 1533
BceAI	ACGGC	2 cut(s)	607, 670
BcgI	CGANNNNNNTGC	4 cut(s)	1030, 1064, 1396, 1430
BciT130I	CCWGG	4 cut(s)	171, 327, 600, 1572
BcnI	CCSGG	1 cut(s)	798
BcoDI	GTCTC	3 cut(s)	104, 840, 1460
BfaI	CTAG	7 cut(s)	20, 677, 1158, 1233, 1254, 1611, 1705
BfmI	CTRYAG	4 cut(s)	91, 411, 990, 1213
BisI	GCNGC	5 cut(s)	72, 753, 858, 1155, 1446
BlpI	GCTNAGC	1 cut(s)	480
BlsI	GCNGC	5 cut(s)	73, 754, 859, 1156, 1447
BmcAI	AGTACT	1 cut(s)	1632
Bme1390I	CCNGG	5 cut(s)	171, 327, 600, 798, 1572
Bme18I	GGWCC	4 cut(s)	173, 293, 1133, 1649
BmgT120I	GGNCC	4 cut(s)	173, 293, 1133, 1649
BmiI	GGNNCC	3 cut(s)	373, 1134, 1651
BmrFI	CCNGG	5 cut(s)	171, 327, 600, 798, 1572
BmsI	GCATC	5 cut(s)	135, 509, 1282, 1361, 1398
BmtI	GCTAGC	1 cut(s)	1161
BpmI	CTGGAG	3 cut(s)	902, 1461, 1593
Bpu1102I	GCTNAGC	1 cut(s)	480
Bpu14I	TTCGAA	1 cut(s)	135
BpuEI	CTTGAG	1 cut(s)	729
BpuMI	CCSGG	1 cut(s)	798
BsaAI	YACGTR	1 cut(s)	407
BsaI	GGTCTC	1 cut(s)	1460
BsaJI	CCNNGG	7 cut(s)	69, 169, 281, 418, 735, 807, 1372
BsaWI	WCCGGW	1 cut(s)	1504
BsaXI	ACNNNNNCTCC	4 cut(s)	602, 632, 1459, 1489
Bsc4I	CCNNNNNNNGG	8 cut(s)	70, 252, 381, 446, 575, 808, 1319, 1535
Bse1I	ACTGG	4 cut(s)	257, 404, 832, 919
Bse3DI	GCAATG	1 cut(s)	852
BseBI	CCWGG	4 cut(s)	171, 327, 600, 1572
BseDI	CCNNGG	7 cut(s)	69, 169, 281, 418, 735, 807, 1372
BseGI	GGATG	5 cut(s)	580, 1036, 1294, 1402, 1544
BseLI	CCNNNNNNNGG	8 cut(s)	70, 252, 381, 446, 575, 808, 1319, 1535
BseMI	GCAATG	1 cut(s)	852
BseMII	CTCAG	3 cut(s)	323, 432, 471
BseNI	ACTGG	4 cut(s)	257, 404, 832, 919
BseRI	GAGGAG	1 cut(s)	53
BseSI	GKGCMC	1 cut(s)	317
BseXI	GCAGC	4 cut(s)	764, 869, 1141, 1457
Bsh1236I	CGCG	1 cut(s)	71
Bsh1285I	CGRYCG	1 cut(s)	978
BshFI	GGCC	2 cut(s)	598, 801
BshNI	GGYRCC	1 cut(s)	371
BsiEI	CGRYCG	1 cut(s)	978
BsiSI	CCGG	3 cut(s)	720, 798, 1505
BslFI	GGGAC	2 cut(s)	1336, 1390
BslI	CCNNNNNNNGG	8 cut(s)	70, 252, 381, 446, 575, 808, 1319, 1535
BsmAI	GTCTC	3 cut(s)	104, 840, 1460
BsmBI	CGTCTC	1 cut(s)	104
BsmFI	GGGAC	2 cut(s)	1336, 1390
BsmI	GAATGC	1 cut(s)	1396
BsnI	GGCC	2 cut(s)	598, 801
Bso31I	GGTCTC	1 cut(s)	1460
Bsp119I	TTCGAA	1 cut(s)	135
Bsp1286I	GDGCHC	1 cut(s)	317
Bsp143I	GATC	5 cut(s)	36, 585, 1108, 1498, 1668
Bsp1720I	GCTNAGC	1 cut(s)	480
Bsp19I	CCATGG	3 cut(s)	281, 418, 807
BspACI	CCGC	3 cut(s)	69, 71, 936
BspANI	GGCC	2 cut(s)	598, 801
BspCNI	CTCAG	3 cut(s)	322, 433, 472
BspFNI	CGCG	1 cut(s)	71
BspLI	GGNNCC	3 cut(s)	373, 1134, 1651
BspMAI	CTGCAG	1 cut(s)	994
BspOI	GCTAGC	1 cut(s)	1161
BspPI	GGATC	3 cut(s)	44, 1493, 1663
BspT104I	TTCGAA	1 cut(s)	135
BspT107I	GGYRCC	1 cut(s)	371
BspTNI	GGTCTC	1 cut(s)	1460
BsrDI	GCAATG	1 cut(s)	852
BsrI	ACTGG	4 cut(s)	257, 404, 832, 919
BssECI	CCNNGG	7 cut(s)	69, 169, 281, 418, 735, 807, 1372
BssMI	GATC	5 cut(s)	36, 585, 1108, 1498, 1668
BssT1I	CCWWGG	4 cut(s)	281, 418, 807, 1372
Bst2UI	CCWGG	4 cut(s)	171, 327, 600, 1572
Bst4CI	ACNGT	6 cut(s)	154, 415, 686, 736, 1084, 1630
BstBAI	YACGTR	1 cut(s)	407
BstBI	TTCGAA	1 cut(s)	135
BstC8I	GCNNGC	5 cut(s)	387, 596, 1027, 1152, 1159
BstDEI	CTNAG	5 cut(s)	31, 309, 441, 480, 1530
BstDSI	CCRYGG	5 cut(s)	69, 281, 418, 735, 807
BstEII	GGTNACC	1 cut(s)	557
BstENI	CCTNNNNNAGG	1 cut(s)	444
BstF5I	GGATG	5 cut(s)	580, 1036, 1294, 1402, 1544
BstFNI	CGCG	1 cut(s)	71
BstHHI	GCGC	2 cut(s)	391, 1445
BstKTI	GATC	5 cut(s)	39, 588, 1111, 1501, 1671
BstMAI	GTCTC	3 cut(s)	104, 840, 1460
BstMBI	GATC	5 cut(s)	36, 585, 1108, 1498, 1668
BstMCI	CGRYCG	1 cut(s)	978
BstMWI	GCNNNNNNNGC	1 cut(s)	749
BstNI	CCWGG	4 cut(s)	171, 327, 600, 1572
BstNSI	RCATGY	2 cut(s)	389, 1222
BstPI	GGTNACC	1 cut(s)	557
BstSCI	CCNGG	5 cut(s)	169, 325, 598, 796, 1570
BstSFI	CTRYAG	4 cut(s)	91, 411, 990, 1213
BstSLI	GKGCMC	1 cut(s)	317
BstUI	CGCG	1 cut(s)	71
BstV1I	GCAGC	4 cut(s)	764, 869, 1141, 1457
BstX2I	RGATCY	3 cut(s)	36, 1498, 1668
BstYI	RGATCY	3 cut(s)	36, 1498, 1668
BsuRI	GGCC	2 cut(s)	598, 801
BtgI	CCRYGG	5 cut(s)	69, 281, 418, 735, 807
BtsCI	GGATG	5 cut(s)	580, 1036, 1294, 1402, 1544
BtsIMutI	CAGTG	3 cut(s)	150, 250, 317
Cac8I	GCNNGC	5 cut(s)	387, 596, 1027, 1152, 1159
CfoI	GCGC	2 cut(s)	391, 1445
Cfr13I	GGNCC	4 cut(s)	173, 293, 1133, 1649
Cfr42I	CCGCGG	1 cut(s)	72
CseI	GACGC	1 cut(s)	758
Csp6I	GTAC	4 cut(s)	922, 1345, 1369, 1631
CspCI	CAANNNNNGTGG	2 cut(s)	532, 567
CviQI	GTAC	4 cut(s)	922, 1345, 1369, 1631
DdeI	CTNAG	5 cut(s)	31, 309, 441, 480, 1530
DpnI	GATC	5 cut(s)	38, 587, 1110, 1500, 1670
DpnII	GATC	5 cut(s)	36, 585, 1108, 1498, 1668
DraIII	CACNNNGTG	1 cut(s)	312
EaeI	YGGCCR	2 cut(s)	596, 799
Eco130I	CCWWGG	4 cut(s)	281, 418, 807, 1372
Eco31I	GGTCTC	1 cut(s)	1460
Eco47I	GGWCC	4 cut(s)	173, 293, 1133, 1649
Eco57I	CTGAAG	1 cut(s)	125
Eco72I	CACGTG	1 cut(s)	407
Eco91I	GGTNACC	1 cut(s)	557
EcoNI	CCTNNNNNAGG	1 cut(s)	444
EcoO109I	RGGNCCY	1 cut(s)	1133
EcoO65I	GGTNACC	1 cut(s)	557
EcoRII	CCWGG	4 cut(s)	169, 325, 598, 1570
EcoT14I	CCWWGG	4 cut(s)	281, 418, 807, 1372
EcoT22I	ATGCAT	2 cut(s)	1413, 1590
ErhI	CCWWGG	4 cut(s)	281, 418, 807, 1372
Esp3I	CGTCTC	1 cut(s)	104
FaqI	GGGAC	2 cut(s)	1336, 1390
Fnu4HI	GCNGC	5 cut(s)	72, 753, 858, 1155, 1446
FokI	GGATG	5 cut(s)	587, 1023, 1301, 1389, 1551
Fsp4HI	GCNGC	5 cut(s)	72, 753, 858, 1155, 1446
FspAI	RTGCGCAY	1 cut(s)	390
FspBI	CTAG	7 cut(s)	20, 677, 1158, 1233, 1254, 1611, 1705
FspI	TGCGCA	1 cut(s)	390
GlaI	GCGC	2 cut(s)	390, 1444
GluI	GCNGC	5 cut(s)	72, 753, 858, 1155, 1446
GsuI	CTGGAG	3 cut(s)	902, 1461, 1593
HaeIII	GGCC	2 cut(s)	598, 801
HapII	CCGG	3 cut(s)	720, 798, 1505
HgaI	GACGC	1 cut(s)	758
HhaI	GCGC	2 cut(s)	391, 1445
Hin6I	GCGC	2 cut(s)	389, 1443
HinP1I	GCGC	2 cut(s)	389, 1443
HincII	GTYRAC	2 cut(s)	1259, 1513
HindII	GTYRAC	2 cut(s)	1259, 1513
HinfI	GANTC	6 cut(s)	319, 875, 986, 1071, 1093, 1554
HpaII	CCGG	3 cut(s)	720, 798, 1505
HphI	GGTGA	3 cut(s)	235, 569, 724
Hpy166II	GTNNAC	7 cut(s)	85, 220, 682, 924, 1259, 1369, 1513
Hpy188I	TCNGA	7 cut(s)	289, 361, 574, 1041, 1407, 1523, 1673
Hpy188III	TCNNGA	4 cut(s)	296, 467, 746, 1478
Hpy8I	GTNNAC	7 cut(s)	85, 220, 682, 924, 1259, 1369, 1513
Hpy99I	CGWCG	3 cut(s)	976, 1442, 1677
HpyAV	CCTTC	5 cut(s)	100, 362, 517, 969, 1321
HpyCH4III	ACNGT	6 cut(s)	154, 415, 686, 736, 1084, 1630
HpyCH4IV	ACGT	3 cut(s)	81, 406, 1603
HpyCH4V	TGCA	9 cut(s)	500, 857, 992, 1204, 1295, 1394, 1411, 1417, 1588
HpyF10VI	GCNNNNNNNGC	1 cut(s)	749
HpyF3I	CTNAG	5 cut(s)	31, 309, 441, 480, 1530
HpySE526I	ACGT	3 cut(s)	81, 406, 1603
HspAI	GCGC	2 cut(s)	389, 1443
KspI	CCGCGG	1 cut(s)	72
Kzo9I	GATC	5 cut(s)	36, 585, 1108, 1498, 1668
LmnI	GCTCC	3 cut(s)	602, 623, 889
Lsp1109I	GCAGC	4 cut(s)	764, 869, 1141, 1457
LweI	GCATC	5 cut(s)	135, 509, 1282, 1361, 1398
MaeI	CTAG	7 cut(s)	20, 677, 1158, 1233, 1254, 1611, 1705
MaeII	ACGT	3 cut(s)	81, 406, 1603
MaeIII	GTNAC	5 cut(s)	395, 402, 422, 557, 772
MalI	GATC	5 cut(s)	38, 587, 1110, 1500, 1670
MboI	GATC	5 cut(s)	36, 585, 1108, 1498, 1668
MboII	GAAGA	6 cut(s)	31, 34, 377, 710, 1066, 1654
MfeI	CAATTG	2 cut(s)	613, 1456
MflI	RGATCY	3 cut(s)	36, 1498, 1668
MhlI	GDGCHC	1 cut(s)	317
MlsI	TGGCCA	1 cut(s)	598
MluCI	AATT	8 cut(s)	489, 531, 549, 613, 714, 1334, 1362, 1456
MluNI	TGGCCA	1 cut(s)	598
MlyI	GAGTC	1 cut(s)	869
MmeI	TCCRAC	1 cut(s)	1696
MnlI	CCTC	9 cut(s)	56, 71, 74, 340, 548, 979, 1024, 1062, 1692
Mox20I	TGGCCA	1 cut(s)	598
Mph1103I	ATGCAT	2 cut(s)	1413, 1590
MscI	TGGCCA	1 cut(s)	598
MseI	TTAA	3 cut(s)	9, 213, 1116
MslI	CAYNNNNRTG	3 cut(s)	225, 255, 1416
Msp20I	TGGCCA	1 cut(s)	598
MspA1I	CMGCKG	2 cut(s)	71, 1265
MspI	CCGG	3 cut(s)	720, 798, 1505
MspR9I	CCNGG	5 cut(s)	171, 327, 600, 798, 1572
MunI	CAATTG	2 cut(s)	613, 1456
Mva1269I	GAATGC	1 cut(s)	1396
MvaI	CCWGG	4 cut(s)	171, 327, 600, 1572
MvnI	CGCG	1 cut(s)	71
MwoI	GCNNNNNNNGC	1 cut(s)	749
NciI	CCSGG	1 cut(s)	798
NcoI	CCATGG	3 cut(s)	281, 418, 807
NdeII	GATC	5 cut(s)	36, 585, 1108, 1498, 1668
NheI	GCTAGC	1 cut(s)	1157
NlaIV	GGNNCC	3 cut(s)	373, 1134, 1651
NmuCI	GTSAC	4 cut(s)	395, 402, 422, 557
NsbI	TGCGCA	1 cut(s)	390
NsiI	ATGCAT	2 cut(s)	1413, 1590
NspI	RCATGY	2 cut(s)	389, 1222
NspV	TTCGAA	1 cut(s)	135
PaeI	GCATGC	1 cut(s)	389
PcsI	WCGNNNNNNNCGW	1 cut(s)	888
PctI	GAATGC	1 cut(s)	1396
PfeI	GAWTC	5 cut(s)	319, 986, 1071, 1093, 1554
PflMI	CCANNNNNTGG	3 cut(s)	252, 575, 808
PfoI	TCCNGGA	1 cut(s)	1570
PkrI	GCNGC	5 cut(s)	73, 754, 859, 1156, 1447
PleI	GAGTC	1 cut(s)	869
PmaCI	CACGTG	1 cut(s)	407
PmlI	CACGTG	1 cut(s)	407
PpsI	GAGTC	1 cut(s)	869
Ppu21I	YACGTR	1 cut(s)	407
PpuMI	RGGWCCY	1 cut(s)	1133
Psp5II	RGGWCCY	1 cut(s)	1133
Psp6I	CCWGG	4 cut(s)	169, 325, 598, 1570
PspCI	CACGTG	1 cut(s)	407
PspEI	GGTNACC	1 cut(s)	557
PspGI	CCWGG	4 cut(s)	169, 325, 598, 1570
PspN4I	GGNNCC	3 cut(s)	373, 1134, 1651
PspPI	GGNCC	4 cut(s)	173, 293, 1133, 1649
PspPPI	RGGWCCY	1 cut(s)	1133
PstI	CTGCAG	1 cut(s)	994
PsuI	RGATCY	3 cut(s)	36, 1498, 1668
PvuII	CAGCTG	1 cut(s)	1265
RsaI	GTAC	4 cut(s)	923, 1346, 1370, 1632
RsaNI	GTAC	4 cut(s)	922, 1345, 1369, 1631
RseI	CAYNNNNRTG	3 cut(s)	225, 255, 1416
SacII	CCGCGG	1 cut(s)	72
SaqAI	TTAA	3 cut(s)	9, 213, 1116
SatI	GCNGC	5 cut(s)	72, 753, 858, 1155, 1446
Sau3AI	GATC	5 cut(s)	36, 585, 1108, 1498, 1668
Sau96I	GGNCC	4 cut(s)	173, 293, 1133, 1649
ScaI	AGTACT	1 cut(s)	1632
SchI	GAGTC	1 cut(s)	869
ScrFI	CCNGG	5 cut(s)	171, 327, 600, 798, 1572
SduI	GDGCHC	1 cut(s)	317
SfaNI	GCATC	5 cut(s)	135, 509, 1282, 1361, 1398
SfcI	CTRYAG	4 cut(s)	91, 411, 990, 1213
Sfr303I	CCGCGG	1 cut(s)	72
SfuI	TTCGAA	1 cut(s)	135
SgrBI	CCGCGG	1 cut(s)	72
SinI	GGWCC	4 cut(s)	173, 293, 1133, 1649
SmiMI	CAYNNNNRTG	3 cut(s)	225, 255, 1416
SmlI	CTYRAG	1 cut(s)	744
SmoI	CTYRAG	1 cut(s)	744
SphI	GCATGC	1 cut(s)	389
Sse9I	AATT	8 cut(s)	489, 531, 549, 613, 714, 1334, 1362, 1456
SsiI	CCGC	3 cut(s)	69, 71, 936
SspI	AATATT	2 cut(s)	1060, 1384
SspMI	CTAG	7 cut(s)	20, 677, 1158, 1233, 1254, 1611, 1705
StyD4I	CCNGG	5 cut(s)	169, 325, 598, 796, 1570
StyI	CCWWGG	4 cut(s)	281, 418, 807, 1372
TaaI	ACNGT	6 cut(s)	154, 415, 686, 736, 1084, 1630
TaiI	ACGT	3 cut(s)	84, 409, 1606
TaqI	TCGA	5 cut(s)	48, 135, 891, 971, 1552
TaqII	GACCGA	1 cut(s)	992
TasI	AATT	8 cut(s)	489, 531, 549, 613, 714, 1334, 1362, 1456
TatI	WGTACW	2 cut(s)	921, 1630
TauI	GCSGC	1 cut(s)	74
TfiI	GAWTC	5 cut(s)	319, 986, 1071, 1093, 1554
Tru1I	TTAA	3 cut(s)	9, 213, 1116
Tru9I	TTAA	3 cut(s)	9, 213, 1116
TscAI	CASTG	3 cut(s)	157, 257, 317
TseFI	GTSAC	4 cut(s)	395, 402, 422, 557
TseI	GCWGC	4 cut(s)	752, 857, 1154, 1445
Tsp45I	GTSAC	4 cut(s)	395, 402, 422, 557
TspDTI	ATGAA	6 cut(s)	173, 378, 639, 707, 1066, 1637
TspGWI	ACGGA	1 cut(s)	1078
TspRI	CASTG	3 cut(s)	157, 257, 317
Van91I	CCANNNNNTGG	3 cut(s)	252, 575, 808
VpaK11BI	GGWCC	4 cut(s)	173, 293, 1133, 1649
XagI	CCTNNNNNAGG	1 cut(s)	444
XceI	RCATGY	2 cut(s)	389, 1222
XcmI	CCANNNNNNNNNTGG	1 cut(s)	279
XspI	CTAG	7 cut(s)	20, 677, 1158, 1233, 1254, 1611, 1705
ZrmI	AGTACT	1 cut(s)	1632
Zsp2I	ATGCAT	2 cut(s)	1413, 1590

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.