Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0002854

Physical Location & Seq

Genomic Coordinates Reverse (-)

34839018 .. 34845645

Gene Structure 6628 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013642

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGGGTTGCCGCATACTCGTCCTCCTCCTGGGAACTTTCTTCCTTGATGGGCTTCTCCTCTCCGTGGCTGCTAACGTCCACCACTACAGCTTTATTCTGAAGGAGACCAACTTTACAAGACTTTGTTTCACAAAGCCGATGCTCACTGTAAATGAGTCGTTCCCAGGGCCAACCATTCATGTTCGCAAAGGGGATAGAGCTTTTGTTAATGTCCACAACAATGGCAAATATGGTGTCACCATTCACTGGCATGGAGTGAAGCAACCGCATAATCCATGGTCAGATGGTCCAGAAAATATCACTCAGTGTCCTATTCAACCAGGAAAGAATTTCACTTATGAGGTCATATTCTCAGATGAAGAAGGCACGCTATGGTGGCACGCACATAGCGACTGGTCACGTGCCACAGTTCACGGCCACATTGTTATTTTACCTGAGAGAGGAAAAACCTATCCATTTTCCGAACCTTATGCCGAGCAAACAATTTTTCTTGGATCATGGTTCGATACAGACGTAAAGGAACTAATTGATGACGCCACGGCAACCGGAAGTGACCCAGAGGCGTCCACTGGATTCACCATCAATGGTTGGCCAGGAGCTTTATACAATTGCTCCAATGAAACGATATACACTCTTGGGGTTGAATACGGCAAAACCTATCTTCTTCGTCTAGTGAGTGGTGTTATGAACGAAGAAATGTTCTTTGGAATTGCCGGGCACAACTTCACGGTGGTGACACAAGACGCATCATACTTAAAGCCAATAGTCACAAGCTACATAATGATAGCTCCAGGCCAAACCATGGATATTCTACTAACGGCAGACCAGACCCCAAGTTACTATTACATTGCTGCCAGCCCATTTTTCGACTCAAACGCTCCCTTCGACAACACCACCACCACGGCCATCCTCCGGTACACGAACGTAACTTCCGCCCCATCAACTATTCCCATGCCTTCACTTCCCTTTGTAACAGACAAAGAAGCTGTAGACAACTTCACAGCTCAGTTAAGGGCGTTGGCAAGCAAGGAACATCCTATCAGTGTGCCAAAAAATTTTACGGAAAGAATCATAATCTCAGTCTCTGTGAATCAACTACCTTGTGAGGCTAATGTCACCTGCGGGGGTCCGAACGGTAACAGGCTGGCTGCTAGCCTGAGCAATATCAGCTTCTCTACCCCCACTACTGACATACTGCAAGCATACTATAGGAACTTAAATGATACCTACGAAGACGATTTTCCAAATCAACCGCCGGTGTATTTCAACTTTTCTGGAGTTGATACAGAACTGTATCTATTGCCGGAGGTAGGGACAAAGGTGAAGATGATCGAGTACGGGGCATCAATTGAAATTGTGTACCAAGGGACTAATGTCGGGAATGCAGAAAACCATCCAATGCATCTACATGGTTACAGCTTCTATGTTGTTGGGTCTGCTTACGGCAACTGGAATGAGACCACTTCTCCGGCCACTTACAACTTGGTCGATCCACCGGAAGTTAACACTGTTGGAGTTCCGAAGAATGGATGGACTGCCATCCGATTCGTTGCTAACAATCCCGGAGTGTGGTTTATGCATTGTCATTTAGAACGCCACAGTAGCTGGGGTATGAATTCGGCTTATCCATCGCAATCAACATCAGCAGAACCTTGTGAGTGCCCACAAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

558

Amino Acids

61.83

Weight (kDa)

5.16

Isoelectric Point (pI)

34.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	34 - 146	1.4e-39	Multicopper oxidase
Cu-oxidase	PF00394	160 - 308	9.5e-40	Multicopper oxidase
Cu-oxidase_2	PF07731	414 - 542	2.2e-37	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002854)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20010 FvH4_1g20010 FvH4_1g20010 FvH4_1g20010 FvH4_1g20010 FvH4_2g12570 FvH4_2g12570 FvH4_2g12590
rosa_chinensis	RchiOBHm_Chr2g0111951 RchiOBHm_Chr6g0273101 RchiOBHm_Chr6g0273121 RchiOBHm_Chr6g0273151
rosa_laevigata	RLG00000013635 RLG00000013637 RLG00000013641 RLG00000013642 RLG00000013643 RLG00000017941
rosa_multiflora	Rmu_sc0000239.1_g000097 Rmu_sc0000239.1_g000109 Rmu_sc0000239.1_g000114 Rmu_sc0005679.1_g000003
rosa_roxburghii	Rroxscaffold_2G00131960 Rroxscaffold_7G00195580 Rroxscaffold_7G00195630 Rroxscaffold_7G00195660
rosa_rugosa	Rorug02G0177500 Rorug06G0073000 Rorug06G0073100
rosa_samantha	Rh2CG233900 Rh2DG237500 Rh6BG191800 Rh6BG192000 Rh6CG191000 Rh6DG182600
rosa_wichuraiana	Rw2G017790 Rw6G016320 Rw6G016330 Rw6G016380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1127
Acc36I	ACCTGC	1 cut(s)	1127
AccB7I	CCANNNNNTGG	2 cut(s)	246, 802
AccI	GTMKAC	1 cut(s)	990
AciI	CCGC	5 cut(s)	10, 266, 933, 1122, 1253
AclWI	GGATC	2 cut(s)	502, 1484
AcoI	YGGCCR	4 cut(s)	415, 590, 903, 1470
AcsI	RAATTY	3 cut(s)	328, 1054, 1615
AcuI	CTGAAG	1 cut(s)	119
AcvI	CACGTG	1 cut(s)	401
AcyI	GRCGYC	2 cut(s)	534, 563
AdeI	CACNNNGTG	1 cut(s)	306
AfaI	GTAC	3 cut(s)	917, 1337, 1361
AfiI	CCNNNNNNNGG	9 cut(s)	28, 64, 246, 440, 802, 912, 1310, 1526, 1569
AgsI	TTSAA	4 cut(s)	317, 644, 1267, 1352
AjnI	CCWGG	5 cut(s)	27, 163, 319, 592, 790
AjuI	GAANNNNNNNTTGG	2 cut(s)	687, 719
AleI	CACNNNNGTG	1 cut(s)	731
AloI	GAACNNNNNNTCC	2 cut(s)	914, 946
Alw26I	GTCTC	3 cut(s)	98, 1087, 1451
AlwI	GGATC	2 cut(s)	502, 1484
AlwNI	CAGNNNCTG	2 cut(s)	1085, 1605
AoxI	GGCC	6 cut(s)	167, 415, 590, 793, 903, 1470
ApeKI	GCWGC	3 cut(s)	68, 851, 1148
ApoI	RAATTY	3 cut(s)	328, 1054, 1615
ArsI	GACNNNNNNTTYG	2 cut(s)	219, 251
AspS9I	GGNCC	3 cut(s)	167, 287, 1127
AsuC2I	CCSGG	2 cut(s)	715, 1563
AsuHPI	GGTGA	5 cut(s)	229, 568, 745, 1108, 1333
AsuNHI	GCTAGC	1 cut(s)	1151
AvaII	GGWCC	2 cut(s)	287, 1127
BaeGI	GKGCMC	2 cut(s)	720, 1664
BaeI	ACNNNNGTAYC	2 cut(s)	498, 531
BalI	TGGCCA	1 cut(s)	592
BbrPI	CACGTG	1 cut(s)	401
BbsI	GAAGAC	1 cut(s)	1239
BbvI	GCAGC	3 cut(s)	55, 838, 1135
BccI	CCATC	9 cut(s)	41, 278, 587, 914, 946, 1401, 1524, 1547, 1636
BceAI	ACGGC	6 cut(s)	430, 555, 664, 834, 918, 1459
BcgI	CGANNNNNNTGC	2 cut(s)	452, 486
BciT130I	CCWGG	5 cut(s)	29, 165, 321, 594, 792
BcnI	CCSGG	2 cut(s)	715, 1563
BcoDI	GTCTC	3 cut(s)	98, 1087, 1451
BfaI	CTAG	2 cut(s)	671, 1152
BfmI	CTRYAG	3 cut(s)	85, 987, 1207
BfuAI	ACCTGC	1 cut(s)	1127
BisI	GCNGC	4 cut(s)	10, 69, 852, 1149
BlsI	GCNGC	4 cut(s)	11, 70, 853, 1150
Bme1390I	CCNGG	7 cut(s)	29, 165, 321, 594, 715, 792, 1563
Bme18I	GGWCC	2 cut(s)	287, 1127
BmgT120I	GGNCC	3 cut(s)	167, 287, 1127
BmiI	GGNNCC	1 cut(s)	1128
BmrFI	CCNGG	7 cut(s)	29, 165, 321, 594, 715, 792, 1563
BmsI	GCATC	4 cut(s)	129, 755, 1352, 1411
BmtI	GCTAGC	1 cut(s)	1155
BoxI	GACNNNNGTC	1 cut(s)	1373
BpiI	GAAGAC	1 cut(s)	1239
BpmI	CTGGAG	2 cut(s)	774, 1296
Bpu10I	CCTNAGC	1 cut(s)	1157
BpuMI	CCSGG	2 cut(s)	715, 1563
BsaAI	YACGTR	1 cut(s)	401
BsaHI	GRCGYC	2 cut(s)	534, 563
BsaI	GGTCTC	2 cut(s)	98, 1451
BsaJI	CCNNGG	9 cut(s)	28, 63, 163, 164, 275, 537, 801, 900, 1363
BsaWI	WCCGGW	3 cut(s)	545, 912, 1495
BsaXI	ACNNNNNCTCC	6 cut(s)	6, 36, 596, 626, 1450, 1480
Bsc4I	CCNNNNNNNGG	9 cut(s)	28, 64, 246, 440, 802, 912, 1310, 1526, 1569
Bse118I	RCCGGY	1 cut(s)	1255
Bse1I	ACTGG	4 cut(s)	251, 398, 574, 1454
Bse3DI	GCAATG	1 cut(s)	846
BseBI	CCWGG	5 cut(s)	29, 165, 321, 594, 792
BseDI	CCNNGG	9 cut(s)	28, 63, 163, 164, 275, 537, 801, 900, 1363
BseGI	GGATG	5 cut(s)	906, 1033, 1393, 1535, 1539
BseLI	CCNNNNNNNGG	9 cut(s)	28, 64, 246, 440, 802, 912, 1310, 1526, 1569
BseMI	GCAATG	1 cut(s)	846
BseMII	CTCAG	6 cut(s)	317, 366, 426, 1019, 1092, 1148
BseNI	ACTGG	4 cut(s)	251, 398, 574, 1454
BseRI	GAGGAG	2 cut(s)	14, 47
BseSI	GKGCMC	2 cut(s)	720, 1664
BseXI	GCAGC	3 cut(s)	55, 838, 1135
BseYI	CCCAGC	1 cut(s)	1605
BshFI	GGCC	6 cut(s)	169, 417, 592, 795, 905, 1472
BsiSI	CCGG	8 cut(s)	546, 714, 913, 1256, 1304, 1469, 1496, 1563
BslFI	GGGAC	2 cut(s)	1327, 1381
BslI	CCNNNNNNNGG	9 cut(s)	28, 64, 246, 440, 802, 912, 1310, 1526, 1569
BsmAI	GTCTC	3 cut(s)	98, 1087, 1451
BsmFI	GGGAC	2 cut(s)	1327, 1381
BsmI	GAATGC	1 cut(s)	1387
BsnI	GGCC	6 cut(s)	169, 417, 592, 795, 905, 1472
Bso31I	GGTCTC	2 cut(s)	98, 1451
Bsp1286I	GDGCHC	2 cut(s)	720, 1664
Bsp143I	GATC	3 cut(s)	494, 1329, 1489
Bsp19I	CCATGG	2 cut(s)	275, 801
BspACI	CCGC	5 cut(s)	10, 266, 933, 1122, 1253
BspANI	GGCC	6 cut(s)	169, 417, 592, 795, 905, 1472
BspCNI	CTCAG	6 cut(s)	316, 365, 427, 1018, 1091, 1149
BspLI	GGNNCC	1 cut(s)	1128
BspMI	ACCTGC	1 cut(s)	1127
BspOI	GCTAGC	1 cut(s)	1155
BspPI	GGATC	2 cut(s)	502, 1484
BspTNI	GGTCTC	2 cut(s)	98, 1451
BsrDI	GCAATG	1 cut(s)	846
BsrFI	RCCGGY	1 cut(s)	1255
BsrI	ACTGG	4 cut(s)	251, 398, 574, 1454
BssAI	RCCGGY	1 cut(s)	1255
BssECI	CCNNGG	9 cut(s)	28, 63, 163, 164, 275, 537, 801, 900, 1363
BssMI	GATC	3 cut(s)	494, 1329, 1489
BssNI	GRCGYC	2 cut(s)	534, 563
BssT1I	CCWWGG	3 cut(s)	275, 801, 1363
Bst2UI	CCWGG	5 cut(s)	29, 165, 321, 594, 792
Bst4CI	ACNGT	7 cut(s)	148, 409, 730, 1136, 1293, 1510, 1601
BstACI	GRCGYC	2 cut(s)	534, 563
BstBAI	YACGTR	1 cut(s)	401
BstC8I	GCNNGC	7 cut(s)	368, 381, 856, 1024, 1146, 1153, 1200
BstDEI	CTNAG	6 cut(s)	303, 352, 435, 1005, 1078, 1157
BstDSI	CCRYGG	5 cut(s)	63, 275, 537, 801, 900
BstENI	CCTNNNNNAGG	1 cut(s)	438
BstF5I	GGATG	5 cut(s)	906, 1033, 1393, 1535, 1539
BstKTI	GATC	3 cut(s)	497, 1332, 1492
BstMAI	GTCTC	3 cut(s)	98, 1087, 1451
BstMBI	GATC	3 cut(s)	494, 1329, 1489
BstMWI	GCNNNNNNNGC	3 cut(s)	376, 1167, 1602
BstNI	CCWGG	5 cut(s)	29, 165, 321, 594, 792
BstPAI	GACNNNNGTC	1 cut(s)	1373
BstSCI	CCNGG	7 cut(s)	27, 163, 319, 592, 713, 790, 1561
BstSFI	CTRYAG	3 cut(s)	85, 987, 1207
BstSLI	GKGCMC	2 cut(s)	720, 1664
BstV1I	GCAGC	3 cut(s)	55, 838, 1135
BstV2I	GAAGAC	1 cut(s)	1239
BstXI	CCANNNNNNTGG	1 cut(s)	221
BsuRI	GGCC	6 cut(s)	169, 417, 592, 795, 905, 1472
BtgI	CCRYGG	5 cut(s)	63, 275, 537, 801, 900
BtgZI	GCGATG	1 cut(s)	1614
BtsCI	GGATG	5 cut(s)	906, 1033, 1393, 1535, 1539
BtsIMutI	CAGTG	6 cut(s)	144, 244, 311, 567, 1048, 1506
BveI	ACCTGC	1 cut(s)	1127
Cac8I	GCNNGC	7 cut(s)	368, 381, 856, 1024, 1146, 1153, 1200
CaiI	CAGNNNCTG	2 cut(s)	1085, 1605
Cfr10I	RCCGGY	1 cut(s)	1255
Cfr13I	GGNCC	3 cut(s)	167, 287, 1127
CseI	GACGC	3 cut(s)	542, 552, 752
Csp6I	GTAC	3 cut(s)	916, 1336, 1360
CviAII	CATG	7 cut(s)	179, 251, 276, 498, 802, 952, 1409
CviQI	GTAC	3 cut(s)	916, 1336, 1360
DdeI	CTNAG	6 cut(s)	303, 352, 435, 1005, 1078, 1157
DpnI	GATC	3 cut(s)	496, 1331, 1491
DpnII	GATC	3 cut(s)	494, 1329, 1489
DraIII	CACNNNGTG	1 cut(s)	306
EaeI	YGGCCR	4 cut(s)	415, 590, 903, 1470
EciI	GGCGGA	1 cut(s)	922
Eco130I	CCWWGG	3 cut(s)	275, 801, 1363
Eco31I	GGTCTC	2 cut(s)	98, 1451
Eco47I	GGWCC	2 cut(s)	287, 1127
Eco57I	CTGAAG	1 cut(s)	119
Eco72I	CACGTG	1 cut(s)	401
EcoNI	CCTNNNNNAGG	1 cut(s)	438
EcoRI	GAATTC	1 cut(s)	1615
EcoRII	CCWGG	5 cut(s)	27, 163, 319, 592, 790
EcoT14I	CCWWGG	3 cut(s)	275, 801, 1363
EcoT22I	ATGCAT	2 cut(s)	1404, 1581
ErhI	CCWWGG	3 cut(s)	275, 801, 1363
FaeI	CATG	7 cut(s)	182, 254, 279, 501, 805, 955, 1412
FaqI	GGGAC	2 cut(s)	1327, 1381
FatI	CATG	7 cut(s)	178, 250, 275, 497, 801, 951, 1408
FauI	CCCGC	1 cut(s)	1115
FblI	GTMKAC	1 cut(s)	990
Fnu4HI	GCNGC	4 cut(s)	10, 69, 852, 1149
FokI	GGATG	5 cut(s)	893, 1020, 1380, 1526, 1542
Fsp4HI	GCNGC	4 cut(s)	10, 69, 852, 1149
FspBI	CTAG	2 cut(s)	671, 1152
GluI	GCNGC	4 cut(s)	10, 69, 852, 1149
GsaI	CCCAGC	1 cut(s)	1609
GsuI	CTGGAG	2 cut(s)	774, 1296
HaeIII	GGCC	6 cut(s)	169, 417, 592, 795, 905, 1472
HapII	CCGG	8 cut(s)	546, 714, 913, 1256, 1304, 1469, 1496, 1563
HgaI	GACGC	3 cut(s)	542, 552, 752
Hin1I	GRCGYC	2 cut(s)	534, 563
Hin1II	CATG	7 cut(s)	182, 254, 279, 501, 805, 955, 1412
HincII	GTYRAC	1 cut(s)	1504
HindII	GTYRAC	1 cut(s)	1504
HinfI	GANTC	6 cut(s)	155, 573, 869, 1068, 1090, 1545
HpaI	GTTAAC	1 cut(s)	1504
HpaII	CCGG	8 cut(s)	546, 714, 913, 1256, 1304, 1469, 1496, 1563
HphI	GGTGA	5 cut(s)	229, 568, 745, 1108, 1333
Hpy166II	GTNNAC	8 cut(s)	79, 214, 412, 567, 918, 991, 1360, 1504
Hpy188I	TCNGA	7 cut(s)	99, 283, 355, 463, 1131, 1521, 1544
Hpy188III	TCNNGA	3 cut(s)	290, 1275, 1378
Hpy8I	GTNNAC	8 cut(s)	79, 214, 412, 567, 918, 991, 1360, 1504
HpyAV	CCTTC	4 cut(s)	94, 356, 892, 966
HpyCH4III	ACNGT	7 cut(s)	148, 409, 730, 1136, 1293, 1510, 1601
HpyCH4IV	ACGT	4 cut(s)	75, 400, 513, 924
HpyCH4V	TGCA	4 cut(s)	1198, 1385, 1402, 1579
HpyF10VI	GCNNNNNNNGC	3 cut(s)	376, 1167, 1602
HpyF3I	CTNAG	6 cut(s)	303, 352, 435, 1005, 1078, 1157
HpySE526I	ACGT	4 cut(s)	75, 400, 513, 924
Hsp92I	GRCGYC	2 cut(s)	534, 563
Hsp92II	CATG	7 cut(s)	182, 254, 279, 501, 805, 955, 1412
KspAI	GTTAAC	1 cut(s)	1504
Kzo9I	GATC	3 cut(s)	494, 1329, 1489
LmnI	GCTCC	4 cut(s)	596, 617, 793, 883
Lsp1109I	GCAGC	3 cut(s)	55, 838, 1135
LweI	GCATC	4 cut(s)	129, 755, 1352, 1411
MaeI	CTAG	2 cut(s)	671, 1152
MaeII	ACGT	4 cut(s)	75, 400, 513, 924
MalI	GATC	3 cut(s)	496, 1331, 1491
MboI	GATC	3 cut(s)	494, 1329, 1489
MboII	GAAGA	8 cut(s)	31, 371, 653, 656, 704, 1244, 1336, 1534
MfeI	CAATTG	2 cut(s)	607, 1347
MhlI	GDGCHC	2 cut(s)	720, 1664
MlsI	TGGCCA	1 cut(s)	592
MluCI	AATT	9 cut(s)	328, 483, 525, 607, 708, 1054, 1347, 1353, 1615
MluNI	TGGCCA	1 cut(s)	592
MlyI	GAGTC	2 cut(s)	164, 863
MmeI	TCCRAC	1 cut(s)	1492
MnlI	CCTC	9 cut(s)	32, 35, 68, 334, 434, 553, 920, 1099, 1300
Mox20I	TGGCCA	1 cut(s)	592
Mph1103I	ATGCAT	2 cut(s)	1404, 1581
MscI	TGGCCA	1 cut(s)	592
MseI	TTAA	5 cut(s)	207, 755, 1010, 1217, 1503
MslI	CAYNNNNRTG	4 cut(s)	219, 249, 731, 1407
Msp20I	TGGCCA	1 cut(s)	592
MspI	CCGG	8 cut(s)	546, 714, 913, 1256, 1304, 1469, 1496, 1563
MspR9I	CCNGG	7 cut(s)	29, 165, 321, 594, 715, 792, 1563
MunI	CAATTG	2 cut(s)	607, 1347
Mva1269I	GAATGC	1 cut(s)	1387
MvaI	CCWGG	5 cut(s)	29, 165, 321, 594, 792
MwoI	GCNNNNNNNGC	3 cut(s)	376, 1167, 1602
NciI	CCSGG	2 cut(s)	715, 1563
NcoI	CCATGG	2 cut(s)	275, 801
NdeII	GATC	3 cut(s)	494, 1329, 1489
NheI	GCTAGC	1 cut(s)	1151
NlaIII	CATG	7 cut(s)	182, 254, 279, 501, 805, 955, 1412
NlaIV	GGNNCC	1 cut(s)	1128
NmeAIII	GCCGAG	1 cut(s)	499
NmuCI	GTSAC	6 cut(s)	235, 396, 551, 733, 766, 1114
NsiI	ATGCAT	2 cut(s)	1404, 1581
OliI	CACNNNNGTG	1 cut(s)	731
PaqCI	CACCTGC	1 cut(s)	1127
PasI	CCCWGGG	1 cut(s)	164
PcsI	WCGNNNNNNNCGW	3 cut(s)	387, 510, 882
PctI	GAATGC	1 cut(s)	1387
PfeI	GAWTC	4 cut(s)	573, 1068, 1090, 1545
PflMI	CCANNNNNTGG	2 cut(s)	246, 802
PfoI	TCCNGGA	1 cut(s)	1561
PkrI	GCNGC	4 cut(s)	11, 70, 853, 1150
PleI	GAGTC	2 cut(s)	163, 863
PmaCI	CACGTG	1 cut(s)	401
PmlI	CACGTG	1 cut(s)	401
PpsI	GAGTC	2 cut(s)	163, 863
Ppu21I	YACGTR	1 cut(s)	401
PshAI	GACNNNNGTC	1 cut(s)	1373
Psp6I	CCWGG	5 cut(s)	27, 163, 319, 592, 790
PspCI	CACGTG	1 cut(s)	401
PspFI	CCCAGC	1 cut(s)	1605
PspGI	CCWGG	5 cut(s)	27, 163, 319, 592, 790
PspN4I	GGNNCC	1 cut(s)	1128
PspPI	GGNCC	3 cut(s)	167, 287, 1127
PstNI	CAGNNNCTG	2 cut(s)	1085, 1605
RsaI	GTAC	3 cut(s)	917, 1337, 1361
RsaNI	GTAC	3 cut(s)	916, 1336, 1360
RseI	CAYNNNNRTG	4 cut(s)	219, 249, 731, 1407
SaqAI	TTAA	5 cut(s)	207, 755, 1010, 1217, 1503
SatI	GCNGC	4 cut(s)	10, 69, 852, 1149
Sau3AI	GATC	3 cut(s)	494, 1329, 1489
Sau96I	GGNCC	3 cut(s)	167, 287, 1127
SchI	GAGTC	2 cut(s)	164, 863
ScrFI	CCNGG	7 cut(s)	29, 165, 321, 594, 715, 792, 1563
SduI	GDGCHC	2 cut(s)	720, 1664
SfaNI	GCATC	4 cut(s)	129, 755, 1352, 1411
SfcI	CTRYAG	3 cut(s)	85, 987, 1207
SgrAI	CRCCGGYG	1 cut(s)	1255
SinI	GGWCC	2 cut(s)	287, 1127
SmiMI	CAYNNNNRTG	4 cut(s)	219, 249, 731, 1407
Sse9I	AATT	9 cut(s)	328, 483, 525, 607, 708, 1054, 1347, 1353, 1615
SsiI	CCGC	5 cut(s)	10, 266, 933, 1122, 1253
SspMI	CTAG	2 cut(s)	671, 1152
StyD4I	CCNGG	7 cut(s)	27, 163, 319, 592, 713, 790, 1561
StyI	CCWWGG	3 cut(s)	275, 801, 1363
TaaI	ACNGT	7 cut(s)	148, 409, 730, 1136, 1293, 1510, 1601
TaiI	ACGT	4 cut(s)	78, 403, 516, 927
TaqI	TCGA	5 cut(s)	504, 867, 885, 1332, 1488
TasI	AATT	9 cut(s)	328, 483, 525, 607, 708, 1054, 1347, 1353, 1615
TauI	GCSGC	1 cut(s)	12
TfiI	GAWTC	4 cut(s)	573, 1068, 1090, 1545
Tru1I	TTAA	5 cut(s)	207, 755, 1010, 1217, 1503
Tru9I	TTAA	5 cut(s)	207, 755, 1010, 1217, 1503
TscAI	CASTG	6 cut(s)	151, 251, 311, 574, 1048, 1513
TseFI	GTSAC	6 cut(s)	235, 396, 551, 733, 766, 1114
TseI	GCWGC	3 cut(s)	68, 851, 1148
Tsp45I	GTSAC	6 cut(s)	235, 396, 551, 733, 766, 1114
TspDTI	ATGAA	5 cut(s)	167, 372, 633, 701, 1628
TspGWI	ACGGA	2 cut(s)	52, 1076
TspRI	CASTG	6 cut(s)	151, 251, 311, 574, 1048, 1513
Van91I	CCANNNNNTGG	2 cut(s)	246, 802
VpaK11BI	GGWCC	2 cut(s)	287, 1127
XagI	CCTNNNNNAGG	1 cut(s)	438
XapI	RAATTY	3 cut(s)	328, 1054, 1615
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1480
XmiI	GTMKAC	1 cut(s)	990
XspI	CTAG	2 cut(s)	671, 1152
Zsp2I	ATGCAT	2 cut(s)	1404, 1581

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.