RchiOBHm_Chr6g0282121

Acyl-activating enzyme

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
45487610 .. 45488087
478 bp
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UTR
Exon/CDS
Intron
PRQ25307

Sequence Viewer

Length: 204 bp
ATGACCTCTGGAGCTTCGCTGCCCGTAGTGGTAACGTCTCGAATTGAATCGCTAGGATTCCCATGGCTCACCGGGTACGGGTTGATGGAAACGGCGGGGGTGGTGGTGTCGTGCGCGTGGAAGCCCGGGTGGAATAAGTTGCCAGCGACGGAAAGGGCGAGGTTGAAGTTGAGGCAGGGAGTTGGTGGATCTGGATACGAGTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

67

Amino Acids

7.13

Weight (kDa)

9.51

Isoelectric Point (pI)

45.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 116
AciI CCGC 1 cut(s) 95
AclWI GGATC 1 cut(s) 196
AfaI GTAC 1 cut(s) 77
AfiI CCNNNNNNNGG 1 cut(s) 78
AgsI TTSAA 2 cut(s) 47, 166
AluBI AGCT 1 cut(s) 14
AluI AGCT 1 cut(s) 14
Alw26I GTCTC 1 cut(s) 42
AlwI GGATC 1 cut(s) 196
Ama87I CYCGRG 1 cut(s) 125
ApeKI GCWGC 1 cut(s) 19
AspLEI GCGC 1 cut(s) 116
AsuC2I CCSGG 3 cut(s) 73, 126, 127
AsuHPI GGTGA 1 cut(s) 61
AvaI CYCGRG 1 cut(s) 125
BbvI GCAGC 1 cut(s) 6
BccI CCATC 1 cut(s) 79
BceAI ACGGC 1 cut(s) 108
BciVI GTATCC 1 cut(s) 188
BcnI CCSGG 3 cut(s) 73, 126, 127
BcoDI GTCTC 1 cut(s) 42
BfaI CTAG 1 cut(s) 53
BfuI GTATCC 1 cut(s) 188
BisI GCNGC 1 cut(s) 20
BlsI GCNGC 1 cut(s) 21
Bme1390I CCNGG 3 cut(s) 73, 126, 127
BmeT110I CYCGRG 1 cut(s) 125
BmrFI CCNGG 3 cut(s) 73, 126, 127
BpmI CTGGAG 1 cut(s) 30
BpuMI CCSGG 3 cut(s) 73, 126, 127
BsaJI CCNNGG 2 cut(s) 62, 125
Bsc4I CCNNNNNNNGG 1 cut(s) 78
BseDI CCNNGG 2 cut(s) 62, 125
BseLI CCNNNNNNNGG 1 cut(s) 78
BseXI GCAGC 1 cut(s) 6
Bsh1236I CGCG 1 cut(s) 116
BsiHKCI CYCGRG 1 cut(s) 125
BsiSI CCGG 2 cut(s) 72, 126
BslI CCNNNNNNNGG 1 cut(s) 78
BsmAI GTCTC 1 cut(s) 42
BsmBI CGTCTC 1 cut(s) 42
BsoBI CYCGRG 1 cut(s) 125
Bsp143I GATC 1 cut(s) 188
Bsp19I CCATGG 1 cut(s) 62
BspACI CCGC 1 cut(s) 95
BspFNI CGCG 1 cut(s) 116
BspPI GGATC 1 cut(s) 196
BssECI CCNNGG 2 cut(s) 62, 125
BssMI GATC 1 cut(s) 188
BssT1I CCWWGG 1 cut(s) 62
BstC8I GCNNGC 1 cut(s) 144
BstDSI CCRYGG 1 cut(s) 62
BstFNI CGCG 1 cut(s) 116
BstHHI GCGC 1 cut(s) 116
BstKTI GATC 1 cut(s) 191
BstMAI GTCTC 1 cut(s) 42
BstMBI GATC 1 cut(s) 188
BstSCI CCNGG 3 cut(s) 71, 124, 125
BstUI CGCG 1 cut(s) 116
BstV1I GCAGC 1 cut(s) 6
BstX2I RGATCY 1 cut(s) 188
BstYI RGATCY 1 cut(s) 188
BsuI GTATCC 1 cut(s) 188
BtgI CCRYGG 1 cut(s) 62
Cac8I GCNNGC 1 cut(s) 144
CfoI GCGC 1 cut(s) 116
Cfr9I CCCGGG 1 cut(s) 125
Csp6I GTAC 1 cut(s) 76
CviAII CATG 1 cut(s) 63
CviJI RGCY 3 cut(s) 14, 67, 124
CviKI_1 RGCY 3 cut(s) 14, 67, 124
CviQI GTAC 1 cut(s) 76
DpnI GATC 1 cut(s) 190
DpnII GATC 1 cut(s) 188
Eco130I CCWWGG 1 cut(s) 62
Eco88I CYCGRG 1 cut(s) 125
EcoT14I CCWWGG 1 cut(s) 62
ErhI CCWWGG 1 cut(s) 62
Esp3I CGTCTC 1 cut(s) 42
FaeI CATG 1 cut(s) 66
FaiI YATR 1 cut(s) 64
FatI CATG 1 cut(s) 62
FauI CCCGC 1 cut(s) 88
Fnu4HI GCNGC 1 cut(s) 20
Fsp4HI GCNGC 1 cut(s) 20
FspBI CTAG 1 cut(s) 53
GlaI GCGC 1 cut(s) 115
GluI GCNGC 1 cut(s) 20
GsuI CTGGAG 1 cut(s) 30
HapII CCGG 2 cut(s) 72, 126
HhaI GCGC 1 cut(s) 116
Hin1II CATG 1 cut(s) 66
Hin6I GCGC 1 cut(s) 114
HinP1I GCGC 1 cut(s) 114
HinfI GANTC 2 cut(s) 47, 57
HpaII CCGG 2 cut(s) 72, 126
HphI GGTGA 1 cut(s) 61
Hpy188III TCNNGA 3 cut(s) 9, 39, 192
Hpy99I CGWCG 1 cut(s) 151
HpyCH4IV ACGT 1 cut(s) 35
HpySE526I ACGT 1 cut(s) 35
Hsp92II CATG 1 cut(s) 66
HspAI GCGC 1 cut(s) 114
Kzo9I GATC 1 cut(s) 188
LmnI GCTCC 1 cut(s) 11
LpnPI CCDG 5 cut(s) 85, 139, 156, 161, 177
Lsp1109I GCAGC 1 cut(s) 6
MaeI CTAG 1 cut(s) 53
MaeII ACGT 1 cut(s) 35
MaeIII GTNAC 1 cut(s) 31
MalI GATC 1 cut(s) 190
MboI GATC 1 cut(s) 188
MflI RGATCY 1 cut(s) 188
MluCI AATT 1 cut(s) 42
MnlI CCTC 3 cut(s) 16, 153, 165
MspI CCGG 2 cut(s) 72, 126
MspR9I CCNGG 3 cut(s) 73, 126, 127
MvnI CGCG 1 cut(s) 116
NciI CCSGG 3 cut(s) 73, 126, 127
NcoI CCATGG 1 cut(s) 62
NdeII GATC 1 cut(s) 188
NlaIII CATG 1 cut(s) 66
PcsI WCGNNNNNNNCGW 1 cut(s) 155
PfeI GAWTC 2 cut(s) 47, 57
PkrI GCNGC 1 cut(s) 21
PsuI RGATCY 1 cut(s) 188
RsaI GTAC 1 cut(s) 77
RsaNI GTAC 1 cut(s) 76
SatI GCNGC 1 cut(s) 20
Sau3AI GATC 1 cut(s) 188
ScrFI CCNGG 3 cut(s) 73, 126, 127
SetI ASST 4 cut(s) 8, 16, 38, 164
SmaI CCCGGG 1 cut(s) 127
Sse9I AATT 1 cut(s) 42
SsiI CCGC 1 cut(s) 95
SspMI CTAG 1 cut(s) 53
StyD4I CCNGG 3 cut(s) 71, 124, 125
StyI CCWWGG 1 cut(s) 62
TaiI ACGT 1 cut(s) 38
TaqI TCGA 1 cut(s) 40
TasI AATT 1 cut(s) 42
TfiI GAWTC 2 cut(s) 47, 57
TseI GCWGC 1 cut(s) 19
TspGWI ACGGA 1 cut(s) 164
TspMI CCCGGG 1 cut(s) 125
XmaI CCCGGG 1 cut(s) 125
XspI CTAG 1 cut(s) 53
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.