centromere protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0067941 RchiOBHm_Chr6g0290021 |
| rosa_roxburghii | Rroxscaffold_1G00066430 Rroxscaffold_5G00372550 Rroxscaffold_7G00210250 |
| rosa_samantha | Rh1BG185400 Rh2BG542200 Rh3BG259500 Rh5BG099000 Rh7BG442500 Rh7BG455400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 220 |
| AciI | CCGC | 1 cut(s) | 111 |
| AcsI | RAATTY | 1 cut(s) | 164 |
| AfaI | GTAC | 1 cut(s) | 12 |
| AgsI | TTSAA | 3 cut(s) | 81, 163, 246 |
| AluBI | AGCT | 1 cut(s) | 250 |
| AluI | AGCT | 1 cut(s) | 250 |
| Alw26I | GTCTC | 2 cut(s) | 179, 182 |
| AoxI | GGCC | 1 cut(s) | 156 |
| ApeKI | GCWGC | 1 cut(s) | 98 |
| ApoI | RAATTY | 1 cut(s) | 164 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 239, 271 |
| BbsI | GAAGAC | 1 cut(s) | 249 |
| BbvI | GCAGC | 1 cut(s) | 110 |
| BceAI | ACGGC | 1 cut(s) | 56 |
| BcoDI | GTCTC | 2 cut(s) | 179, 182 |
| BfaI | CTAG | 1 cut(s) | 86 |
| BfuAI | ACCTGC | 1 cut(s) | 220 |
| BisI | GCNGC | 2 cut(s) | 99, 112 |
| BlsI | GCNGC | 2 cut(s) | 100, 113 |
| BpiI | GAAGAC | 1 cut(s) | 249 |
| BsaI | GGTCTC | 1 cut(s) | 179 |
| BsaJI | CCNNGG | 1 cut(s) | 132 |
| Bse1I | ACTGG | 1 cut(s) | 175 |
| Bse3DI | GCAATG | 1 cut(s) | 212 |
| BseDI | CCNNGG | 1 cut(s) | 132 |
| BseMI | GCAATG | 1 cut(s) | 212 |
| BseMII | CTCAG | 1 cut(s) | 86 |
| BseNI | ACTGG | 1 cut(s) | 175 |
| BseXI | GCAGC | 1 cut(s) | 110 |
| BshFI | GGCC | 1 cut(s) | 158 |
| BsmAI | GTCTC | 2 cut(s) | 179, 182 |
| BsmI | GAATGC | 1 cut(s) | 215 |
| BsnI | GGCC | 1 cut(s) | 158 |
| Bso31I | GGTCTC | 1 cut(s) | 179 |
| Bsp143I | GATC | 1 cut(s) | 267 |
| BspACI | CCGC | 1 cut(s) | 111 |
| BspANI | GGCC | 1 cut(s) | 158 |
| BspCNI | CTCAG | 1 cut(s) | 85 |
| BspMI | ACCTGC | 1 cut(s) | 220 |
| BspTNI | GGTCTC | 1 cut(s) | 179 |
| BsrDI | GCAATG | 1 cut(s) | 212 |
| BsrI | ACTGG | 1 cut(s) | 175 |
| BssECI | CCNNGG | 1 cut(s) | 132 |
| BssMI | GATC | 1 cut(s) | 267 |
| Bst6I | CTCTTC | 1 cut(s) | 98 |
| BstC8I | GCNNGC | 1 cut(s) | 142 |
| BstDEI | CTNAG | 1 cut(s) | 72 |
| BstDSI | CCRYGG | 1 cut(s) | 132 |
| BstEII | GGTNACC | 1 cut(s) | 232 |
| BstKTI | GATC | 1 cut(s) | 270 |
| BstMAI | GTCTC | 2 cut(s) | 179, 182 |
| BstMBI | GATC | 1 cut(s) | 267 |
| BstNSI | RCATGY | 1 cut(s) | 144 |
| BstPI | GGTNACC | 1 cut(s) | 232 |
| BstV1I | GCAGC | 1 cut(s) | 110 |
| BstV2I | GAAGAC | 1 cut(s) | 249 |
| BsuRI | GGCC | 1 cut(s) | 158 |
| BtgI | CCRYGG | 1 cut(s) | 132 |
| BveI | ACCTGC | 1 cut(s) | 220 |
| Cac8I | GCNNGC | 1 cut(s) | 142 |
| Csp6I | GTAC | 1 cut(s) | 11 |
| CviAII | CATG | 3 cut(s) | 115, 141, 192 |
| CviJI | RGCY | 3 cut(s) | 43, 158, 250 |
| CviKI_1 | RGCY | 3 cut(s) | 43, 158, 250 |
| CviQI | GTAC | 1 cut(s) | 11 |
| DdeI | CTNAG | 1 cut(s) | 72 |
| DpnI | GATC | 1 cut(s) | 269 |
| DpnII | GATC | 1 cut(s) | 267 |
| Eam1104I | CTCTTC | 1 cut(s) | 98 |
| EarI | CTCTTC | 1 cut(s) | 98 |
| Eco31I | GGTCTC | 1 cut(s) | 179 |
| Eco32I | GATATC | 1 cut(s) | 123 |
| Eco91I | GGTNACC | 1 cut(s) | 232 |
| EcoO65I | GGTNACC | 1 cut(s) | 232 |
| EcoRV | GATATC | 1 cut(s) | 123 |
| EcoT22I | ATGCAT | 1 cut(s) | 146 |
| FaeI | CATG | 3 cut(s) | 118, 144, 195 |
| FaiI | YATR | 3 cut(s) | 116, 142, 193 |
| FatI | CATG | 3 cut(s) | 114, 140, 191 |
| Fnu4HI | GCNGC | 2 cut(s) | 99, 112 |
| Fsp4HI | GCNGC | 2 cut(s) | 99, 112 |
| FspBI | CTAG | 1 cut(s) | 86 |
| GluI | GCNGC | 2 cut(s) | 99, 112 |
| HaeIII | GGCC | 1 cut(s) | 158 |
| Hin1II | CATG | 3 cut(s) | 118, 144, 195 |
| HindIII | AAGCTT | 1 cut(s) | 248 |
| HinfI | GANTC | 1 cut(s) | 128 |
| Hpy188I | TCNGA | 3 cut(s) | 127, 151, 262 |
| Hpy99I | CGWCG | 1 cut(s) | 42 |
| HpyAV | CCTTC | 1 cut(s) | 169 |
| HpyCH4V | TGCA | 2 cut(s) | 144, 229 |
| HpyF3I | CTNAG | 1 cut(s) | 72 |
| Hsp92II | CATG | 3 cut(s) | 118, 144, 195 |
| Kzo9I | GATC | 1 cut(s) | 267 |
| LmnI | GCTCC | 1 cut(s) | 195 |
| LpnPI | CCDG | 3 cut(s) | 44, 156, 215 |
| Lsp1109I | GCAGC | 1 cut(s) | 110 |
| MaeI | CTAG | 1 cut(s) | 86 |
| MaeIII | GTNAC | 1 cut(s) | 232 |
| MalI | GATC | 1 cut(s) | 269 |
| MboI | GATC | 1 cut(s) | 267 |
| MboII | GAAGA | 3 cut(s) | 12, 115, 249 |
| MluCI | AATT | 5 cut(s) | 33, 81, 164, 224, 284 |
| MlyI | GAGTC | 1 cut(s) | 122 |
| MmeI | TCCRAC | 1 cut(s) | 174 |
| Mph1103I | ATGCAT | 1 cut(s) | 146 |
| Mva1269I | GAATGC | 1 cut(s) | 215 |
| NdeII | GATC | 1 cut(s) | 267 |
| NlaIII | CATG | 3 cut(s) | 118, 144, 195 |
| NsiI | ATGCAT | 1 cut(s) | 146 |
| NspI | RCATGY | 1 cut(s) | 144 |
| PaeI | GCATGC | 1 cut(s) | 144 |
| PctI | GAATGC | 1 cut(s) | 215 |
| PkrI | GCNGC | 2 cut(s) | 100, 113 |
| PleI | GAGTC | 1 cut(s) | 122 |
| PpsI | GAGTC | 1 cut(s) | 122 |
| PspEI | GGTNACC | 1 cut(s) | 232 |
| RsaI | GTAC | 1 cut(s) | 12 |
| RsaNI | GTAC | 1 cut(s) | 11 |
| SatI | GCNGC | 2 cut(s) | 99, 112 |
| Sau3AI | GATC | 1 cut(s) | 267 |
| SchI | GAGTC | 1 cut(s) | 122 |
| SetI | ASST | 3 cut(s) | 12, 234, 252 |
| SphI | GCATGC | 1 cut(s) | 144 |
| Sse9I | AATT | 5 cut(s) | 33, 81, 164, 224, 284 |
| SsiI | CCGC | 1 cut(s) | 111 |
| SspMI | CTAG | 1 cut(s) | 86 |
| TaqI | TCGA | 1 cut(s) | 37 |
| TasI | AATT | 5 cut(s) | 33, 81, 164, 224, 284 |
| TauI | GCSGC | 1 cut(s) | 114 |
| TseI | GCWGC | 1 cut(s) | 98 |
| TspGWI | ACGGA | 1 cut(s) | 121 |
| XapI | RAATTY | 1 cut(s) | 164 |
| XceI | RCATGY | 1 cut(s) | 144 |
| XspI | CTAG | 1 cut(s) | 86 |
| Zsp2I | ATGCAT | 1 cut(s) | 146 |