The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0067941 RchiOBHm_Chr6g0290021 |
| rosa_roxburghii | Rroxscaffold_1G00066430 Rroxscaffold_5G00372550 Rroxscaffold_7G00210250 |
| rosa_samantha | Rh1BG185400 Rh2BG542200 Rh3BG259500 Rh5BG099000 Rh7BG442500 Rh7BG455400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 218 |
| AcsI | RAATTY | 1 cut(s) | 50 |
| AfaI | GTAC | 1 cut(s) | 398 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 329 |
| AgsI | TTSAA | 2 cut(s) | 49, 292 |
| Alw26I | GTCTC | 3 cut(s) | 65, 68, 211 |
| AoxI | GGCC | 1 cut(s) | 42 |
| ApeKI | GCWGC | 1 cut(s) | 215 |
| ApoI | RAATTY | 1 cut(s) | 50 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 130 |
| BbvI | GCAGC | 1 cut(s) | 227 |
| BcoDI | GTCTC | 3 cut(s) | 65, 68, 211 |
| BfaI | CTAG | 2 cut(s) | 174, 224 |
| BfmI | CTRYAG | 1 cut(s) | 213 |
| BisI | GCNGC | 1 cut(s) | 216 |
| BlsI | GCNGC | 1 cut(s) | 217 |
| BmiI | GGNNCC | 1 cut(s) | 15 |
| BmsI | GCATC | 2 cut(s) | 263, 295 |
| BpuEI | CTTGAG | 1 cut(s) | 131 |
| BsaI | GGTCTC | 1 cut(s) | 65 |
| BsaJI | CCNNGG | 1 cut(s) | 18 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 329 |
| Bse1I | ACTGG | 1 cut(s) | 61 |
| Bse3DI | GCAATG | 1 cut(s) | 98 |
| BseDI | CCNNGG | 1 cut(s) | 18 |
| BseGI | GGATG | 1 cut(s) | 310 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 329 |
| BseMI | GCAATG | 1 cut(s) | 98 |
| BseNI | ACTGG | 1 cut(s) | 61 |
| BseXI | GCAGC | 1 cut(s) | 227 |
| BsgI | GTGCAG | 1 cut(s) | 354 |
| BshFI | GGCC | 1 cut(s) | 44 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 329 |
| BsmAI | GTCTC | 3 cut(s) | 65, 68, 211 |
| BsmI | GAATGC | 1 cut(s) | 101 |
| BsnI | GGCC | 1 cut(s) | 44 |
| Bso31I | GGTCTC | 1 cut(s) | 65 |
| BspACI | CCGC | 1 cut(s) | 218 |
| BspANI | GGCC | 1 cut(s) | 44 |
| BspLI | GGNNCC | 1 cut(s) | 15 |
| BspMAI | CTGCAG | 1 cut(s) | 217 |
| BspTNI | GGTCTC | 1 cut(s) | 65 |
| BsrDI | GCAATG | 1 cut(s) | 98 |
| BsrI | ACTGG | 1 cut(s) | 61 |
| BssECI | CCNNGG | 1 cut(s) | 18 |
| BstC8I | GCNNGC | 3 cut(s) | 28, 247, 262 |
| BstDSI | CCRYGG | 1 cut(s) | 18 |
| BstF5I | GGATG | 1 cut(s) | 310 |
| BstMAI | GTCTC | 3 cut(s) | 65, 68, 211 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 224, 251, 281 |
| BstSFI | CTRYAG | 1 cut(s) | 213 |
| BstV1I | GCAGC | 1 cut(s) | 227 |
| BsuRI | GGCC | 1 cut(s) | 44 |
| BtgI | CCRYGG | 1 cut(s) | 18 |
| BtgZI | GCGATG | 1 cut(s) | 299 |
| BtsCI | GGATG | 1 cut(s) | 310 |
| BtsI | GCAGTG | 2 cut(s) | 210, 249 |
| BtsIMutI | CAGTG | 2 cut(s) | 210, 249 |
| Cac8I | GCNNGC | 3 cut(s) | 28, 247, 262 |
| Csp6I | GTAC | 1 cut(s) | 397 |
| CviAII | CATG | 3 cut(s) | 78, 301, 329 |
| CviJI | RGCY | 4 cut(s) | 26, 44, 152, 295 |
| CviKI_1 | RGCY | 4 cut(s) | 26, 44, 152, 295 |
| CviQI | GTAC | 1 cut(s) | 397 |
| Eco31I | GGTCTC | 1 cut(s) | 65 |
| Eco32I | GATATC | 1 cut(s) | 9 |
| EcoRV | GATATC | 1 cut(s) | 9 |
| FaeI | CATG | 3 cut(s) | 81, 304, 332 |
| FaiI | YATR | 8 cut(s) | 79, 162, 201, 268, 270, 302, 326, 330 |
| FatI | CATG | 3 cut(s) | 77, 300, 328 |
| Fnu4HI | GCNGC | 1 cut(s) | 216 |
| FokI | GGATG | 1 cut(s) | 317 |
| Fsp4HI | GCNGC | 1 cut(s) | 216 |
| FspBI | CTAG | 2 cut(s) | 174, 224 |
| GluI | GCNGC | 1 cut(s) | 216 |
| HaeIII | GGCC | 1 cut(s) | 44 |
| Hin1II | CATG | 3 cut(s) | 81, 304, 332 |
| HinfI | GANTC | 2 cut(s) | 126, 185 |
| Hpy188I | TCNGA | 2 cut(s) | 13, 37 |
| Hpy188III | TCNNGA | 1 cut(s) | 341 |
| HpyAV | CCTTC | 1 cut(s) | 55 |
| HpyCH4V | TGCA | 5 cut(s) | 30, 115, 215, 254, 371 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 224, 251, 281 |
| Hsp92II | CATG | 3 cut(s) | 81, 304, 332 |
| LmnI | GCTCC | 2 cut(s) | 81, 343 |
| LpnPI | CCDG | 8 cut(s) | 42, 231, 294, 309, 336, 341, 354, 381 |
| Lsp1109I | GCAGC | 1 cut(s) | 227 |
| LweI | GCATC | 2 cut(s) | 263, 295 |
| MaeI | CTAG | 2 cut(s) | 174, 224 |
| MaeIII | GTNAC | 1 cut(s) | 166 |
| MluCI | AATT | 3 cut(s) | 50, 110, 378 |
| MlyI | GAGTC | 1 cut(s) | 194 |
| MmeI | TCCRAC | 2 cut(s) | 60, 117 |
| MnlI | CCTC | 1 cut(s) | 274 |
| MroXI | GAANNNNTTC | 1 cut(s) | 130 |
| MseI | TTAA | 1 cut(s) | 409 |
| MslI | CAYNNNNRTG | 1 cut(s) | 259 |
| MspA1I | CMGCKG | 1 cut(s) | 218 |
| Mva1269I | GAATGC | 1 cut(s) | 101 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 224, 251, 281 |
| NlaIII | CATG | 3 cut(s) | 81, 304, 332 |
| NlaIV | GGNNCC | 1 cut(s) | 15 |
| NmuCI | GTSAC | 1 cut(s) | 166 |
| PctI | GAATGC | 1 cut(s) | 101 |
| PdmI | GAANNNNTTC | 1 cut(s) | 130 |
| PfeI | GAWTC | 1 cut(s) | 126 |
| PkrI | GCNGC | 1 cut(s) | 217 |
| PleI | GAGTC | 1 cut(s) | 193 |
| PpsI | GAGTC | 1 cut(s) | 193 |
| PspN4I | GGNNCC | 1 cut(s) | 15 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 115, 147 |
| PstI | CTGCAG | 1 cut(s) | 217 |
| RsaI | GTAC | 1 cut(s) | 398 |
| RsaNI | GTAC | 1 cut(s) | 397 |
| RseI | CAYNNNNRTG | 1 cut(s) | 259 |
| SaqAI | TTAA | 1 cut(s) | 409 |
| SatI | GCNGC | 1 cut(s) | 216 |
| SchI | GAGTC | 1 cut(s) | 194 |
| SetI | ASST | 2 cut(s) | 325, 360 |
| SfaNI | GCATC | 2 cut(s) | 263, 295 |
| SfcI | CTRYAG | 1 cut(s) | 213 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 259 |
| SmlI | CTYRAG | 1 cut(s) | 146 |
| SmoI | CTYRAG | 1 cut(s) | 146 |
| Sse9I | AATT | 3 cut(s) | 50, 110, 378 |
| SsiI | CCGC | 1 cut(s) | 218 |
| SspMI | CTAG | 2 cut(s) | 174, 224 |
| TaqI | TCGA | 1 cut(s) | 155 |
| TasI | AATT | 3 cut(s) | 50, 110, 378 |
| TatI | WGTACW | 1 cut(s) | 396 |
| TfiI | GAWTC | 1 cut(s) | 126 |
| Tru1I | TTAA | 1 cut(s) | 409 |
| Tru9I | TTAA | 1 cut(s) | 409 |
| TscAI | CASTG | 2 cut(s) | 217, 256 |
| TseFI | GTSAC | 1 cut(s) | 166 |
| TseI | GCWGC | 1 cut(s) | 215 |
| Tsp45I | GTSAC | 1 cut(s) | 166 |
| TspRI | CASTG | 2 cut(s) | 217, 256 |
| XapI | RAATTY | 1 cut(s) | 50 |
| XmnI | GAANNNNTTC | 1 cut(s) | 130 |
| XspI | CTAG | 2 cut(s) | 174, 224 |