centromere protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0067941 RchiOBHm_Chr6g0290021 |
| rosa_roxburghii | Rroxscaffold_1G00066430 Rroxscaffold_5G00372550 Rroxscaffold_7G00210250 |
| rosa_samantha | Rh1BG185400 Rh2BG542200 Rh3BG259500 Rh5BG099000 Rh7BG442500 Rh7BG455400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 268 |
| AciI | CCGC | 1 cut(s) | 45 |
| AcsI | RAATTY | 1 cut(s) | 98 |
| AcyI | GRCGYC | 1 cut(s) | 269 |
| AgsI | TTSAA | 3 cut(s) | 15, 97, 256 |
| AluBI | AGCT | 1 cut(s) | 289 |
| AluI | AGCT | 1 cut(s) | 289 |
| AoxI | GGCC | 1 cut(s) | 90 |
| ApeKI | GCWGC | 2 cut(s) | 32, 289 |
| ApoI | RAATTY | 1 cut(s) | 98 |
| AspLEI | GCGC | 1 cut(s) | 271 |
| AsuC2I | CCSGG | 1 cut(s) | 240 |
| AsuHPI | GGTGA | 2 cut(s) | 167, 210 |
| BanI | GGYRCC | 1 cut(s) | 268 |
| BbvI | GCAGC | 2 cut(s) | 44, 276 |
| BccI | CCATC | 1 cut(s) | 306 |
| BcnI | CCSGG | 1 cut(s) | 240 |
| BfaI | CTAG | 1 cut(s) | 20 |
| BfoI | RGCGCY | 1 cut(s) | 272 |
| BisI | GCNGC | 3 cut(s) | 33, 46, 290 |
| BlsI | GCNGC | 3 cut(s) | 34, 47, 291 |
| Bme1390I | CCNGG | 1 cut(s) | 240 |
| BmiI | GGNNCC | 2 cut(s) | 63, 270 |
| BmrFI | CCNGG | 1 cut(s) | 240 |
| BmsI | GCATC | 1 cut(s) | 301 |
| BpuMI | CCSGG | 1 cut(s) | 240 |
| BsaHI | GRCGYC | 1 cut(s) | 269 |
| BsaJI | CCNNGG | 1 cut(s) | 66 |
| BseDI | CCNNGG | 1 cut(s) | 66 |
| BseGI | GGATG | 1 cut(s) | 317 |
| BseMII | CTCAG | 1 cut(s) | 96 |
| BseXI | GCAGC | 2 cut(s) | 44, 276 |
| BshFI | GGCC | 1 cut(s) | 92 |
| BshNI | GGYRCC | 1 cut(s) | 268 |
| BsiSI | CCGG | 1 cut(s) | 239 |
| BsnI | GGCC | 1 cut(s) | 92 |
| BspACI | CCGC | 1 cut(s) | 45 |
| BspANI | GGCC | 1 cut(s) | 92 |
| BspCNI | CTCAG | 1 cut(s) | 97 |
| BspLI | GGNNCC | 2 cut(s) | 63, 270 |
| BspT107I | GGYRCC | 1 cut(s) | 268 |
| BssECI | CCNNGG | 1 cut(s) | 66 |
| BssNI | GRCGYC | 1 cut(s) | 269 |
| Bst6I | CTCTTC | 2 cut(s) | 32, 145 |
| BstACI | GRCGYC | 1 cut(s) | 269 |
| BstC8I | GCNNGC | 1 cut(s) | 76 |
| BstDEI | CTNAG | 1 cut(s) | 105 |
| BstDSI | CCRYGG | 1 cut(s) | 66 |
| BstF5I | GGATG | 1 cut(s) | 317 |
| BstH2I | RGCGCY | 1 cut(s) | 272 |
| BstHHI | GCGC | 1 cut(s) | 271 |
| BstSCI | CCNGG | 1 cut(s) | 238 |
| BstV1I | GCAGC | 2 cut(s) | 44, 276 |
| BsuRI | GGCC | 1 cut(s) | 92 |
| BtgI | CCRYGG | 1 cut(s) | 66 |
| BtsCI | GGATG | 1 cut(s) | 317 |
| Cac8I | GCNNGC | 1 cut(s) | 76 |
| CfoI | GCGC | 1 cut(s) | 271 |
| CviAII | CATG | 1 cut(s) | 49 |
| CviJI | RGCY | 5 cut(s) | 74, 92, 289, 299, 305 |
| CviKI_1 | RGCY | 5 cut(s) | 74, 92, 289, 299, 305 |
| DdeI | CTNAG | 1 cut(s) | 105 |
| DinI | GGCGCC | 1 cut(s) | 270 |
| Eam1104I | CTCTTC | 2 cut(s) | 32, 145 |
| EarI | CTCTTC | 2 cut(s) | 32, 145 |
| EgeI | GGCGCC | 1 cut(s) | 270 |
| EheI | GGCGCC | 1 cut(s) | 270 |
| FaeI | CATG | 1 cut(s) | 52 |
| FaiI | YATR | 4 cut(s) | 50, 56, 120, 210 |
| FatI | CATG | 1 cut(s) | 48 |
| Fnu4HI | GCNGC | 3 cut(s) | 33, 46, 290 |
| Fsp4HI | GCNGC | 3 cut(s) | 33, 46, 290 |
| FspBI | CTAG | 1 cut(s) | 20 |
| GlaI | GCGC | 1 cut(s) | 270 |
| GluI | GCNGC | 3 cut(s) | 33, 46, 290 |
| HaeII | RGCGCY | 1 cut(s) | 272 |
| HaeIII | GGCC | 1 cut(s) | 92 |
| HapII | CCGG | 1 cut(s) | 239 |
| HhaI | GCGC | 1 cut(s) | 271 |
| Hin1I | GRCGYC | 1 cut(s) | 269 |
| Hin1II | CATG | 1 cut(s) | 52 |
| Hin6I | GCGC | 1 cut(s) | 269 |
| HinP1I | GCGC | 1 cut(s) | 269 |
| HinfI | GANTC | 1 cut(s) | 225 |
| HpaII | CCGG | 1 cut(s) | 239 |
| HphI | GGTGA | 2 cut(s) | 167, 210 |
| Hpy188I | TCNGA | 2 cut(s) | 61, 85 |
| HpyAV | CCTTC | 3 cut(s) | 103, 138, 142 |
| HpyCH4V | TGCA | 3 cut(s) | 78, 188, 292 |
| HpyF3I | CTNAG | 1 cut(s) | 105 |
| Hsp92I | GRCGYC | 1 cut(s) | 269 |
| Hsp92II | CATG | 1 cut(s) | 52 |
| HspAI | GCGC | 1 cut(s) | 269 |
| KasI | GGCGCC | 1 cut(s) | 268 |
| LpnPI | CCDG | 4 cut(s) | 252, 263, 281, 287 |
| Lsp1109I | GCAGC | 2 cut(s) | 44, 276 |
| LweI | GCATC | 1 cut(s) | 301 |
| MaeI | CTAG | 1 cut(s) | 20 |
| MboII | GAAGA | 2 cut(s) | 49, 162 |
| MluCI | AATT | 3 cut(s) | 15, 98, 112 |
| Mly113I | GGCGCC | 1 cut(s) | 269 |
| MlyI | GAGTC | 1 cut(s) | 234 |
| MnlI | CCTC | 2 cut(s) | 100, 146 |
| MspA1I | CMGCKG | 1 cut(s) | 289 |
| MspI | CCGG | 1 cut(s) | 239 |
| MspR9I | CCNGG | 1 cut(s) | 240 |
| NarI | GGCGCC | 1 cut(s) | 269 |
| NciI | CCSGG | 1 cut(s) | 240 |
| NlaIII | CATG | 1 cut(s) | 52 |
| NlaIV | GGNNCC | 2 cut(s) | 63, 270 |
| PkrI | GCNGC | 3 cut(s) | 34, 47, 291 |
| PleI | GAGTC | 1 cut(s) | 233 |
| PluTI | GGCGCC | 1 cut(s) | 272 |
| PpsI | GAGTC | 1 cut(s) | 233 |
| PspN4I | GGNNCC | 2 cut(s) | 63, 270 |
| PvuII | CAGCTG | 1 cut(s) | 289 |
| SatI | GCNGC | 3 cut(s) | 33, 46, 290 |
| SchI | GAGTC | 1 cut(s) | 234 |
| ScrFI | CCNGG | 1 cut(s) | 240 |
| SetI | ASST | 4 cut(s) | 130, 157, 168, 291 |
| SfaNI | GCATC | 1 cut(s) | 301 |
| SfoI | GGCGCC | 1 cut(s) | 270 |
| Sse9I | AATT | 3 cut(s) | 15, 98, 112 |
| SsiI | CCGC | 1 cut(s) | 45 |
| SspDI | GGCGCC | 1 cut(s) | 268 |
| SspMI | CTAG | 1 cut(s) | 20 |
| StyD4I | CCNGG | 1 cut(s) | 238 |
| TaqI | TCGA | 2 cut(s) | 142, 171 |
| TasI | AATT | 3 cut(s) | 15, 98, 112 |
| TauI | GCSGC | 1 cut(s) | 48 |
| TseI | GCWGC | 2 cut(s) | 32, 289 |
| TspDTI | ATGAA | 2 cut(s) | 107, 197 |
| XapI | RAATTY | 1 cut(s) | 98 |
| XspI | CTAG | 1 cut(s) | 20 |