The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0067941 RchiOBHm_Chr6g0290021 |
| rosa_roxburghii | Rroxscaffold_1G00066430 Rroxscaffold_5G00372550 Rroxscaffold_7G00210250 |
| rosa_samantha | Rh1BG185400 Rh2BG542200 Rh3BG259500 Rh5BG099000 Rh7BG442500 Rh7BG455400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AflIII | ACRYGT | 2 cut(s) | 32, 241 |
| AgsI | TTSAA | 2 cut(s) | 157, 248 |
| AluBI | AGCT | 1 cut(s) | 315 |
| AluI | AGCT | 1 cut(s) | 315 |
| Alw21I | GWGCWC | 1 cut(s) | 317 |
| BanII | GRGCYC | 1 cut(s) | 317 |
| Bbv12I | GWGCWC | 1 cut(s) | 317 |
| BfaI | CTAG | 1 cut(s) | 89 |
| BmsI | GCATC | 2 cut(s) | 128, 178 |
| BpmI | CTGGAG | 1 cut(s) | 27 |
| BsiHKAI | GWGCWC | 1 cut(s) | 317 |
| Bsp1286I | GDGCHC | 1 cut(s) | 317 |
| Bsp143I | GATC | 1 cut(s) | 208 |
| BssMI | GATC | 1 cut(s) | 208 |
| Bst4CI | ACNGT | 1 cut(s) | 53 |
| BstC8I | GCNNGC | 2 cut(s) | 112, 127 |
| BstDEI | CTNAG | 1 cut(s) | 222 |
| BstKTI | GATC | 1 cut(s) | 211 |
| BstMBI | GATC | 1 cut(s) | 208 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 116, 146, 166 |
| BstNSI | RCATGY | 3 cut(s) | 36, 169, 245 |
| BtgZI | GCGATG | 1 cut(s) | 164 |
| BtsI | GCAGTG | 1 cut(s) | 114 |
| BtsIMutI | CAGTG | 2 cut(s) | 114, 200 |
| Cac8I | GCNNGC | 2 cut(s) | 112, 127 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 18, 53 |
| CviAII | CATG | 3 cut(s) | 33, 166, 242 |
| CviJI | RGCY | 3 cut(s) | 5, 160, 315 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 160, 315 |
| DdeI | CTNAG | 1 cut(s) | 222 |
| DpnI | GATC | 1 cut(s) | 210 |
| DpnII | GATC | 1 cut(s) | 208 |
| Ecl136II | GAGCTC | 1 cut(s) | 315 |
| Eco24I | GRGCYC | 1 cut(s) | 317 |
| Eco53kI | GAGCTC | 1 cut(s) | 315 |
| EcoICRI | GAGCTC | 1 cut(s) | 315 |
| EcoT22I | ATGCAT | 1 cut(s) | 171 |
| EcoT38I | GRGCYC | 1 cut(s) | 317 |
| FaeI | CATG | 3 cut(s) | 36, 169, 245 |
| FatI | CATG | 3 cut(s) | 32, 165, 241 |
| FriOI | GRGCYC | 1 cut(s) | 317 |
| FspBI | CTAG | 1 cut(s) | 89 |
| GsuI | CTGGAG | 1 cut(s) | 27 |
| Hin1II | CATG | 3 cut(s) | 36, 169, 245 |
| HinfI | GANTC | 2 cut(s) | 216, 226 |
| Hpy188III | TCNNGA | 2 cut(s) | 83, 248 |
| HpyAV | CCTTC | 1 cut(s) | 37 |
| HpyCH4III | ACNGT | 1 cut(s) | 53 |
| HpyCH4V | TGCA | 2 cut(s) | 119, 169 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 116, 146, 166 |
| HpyF3I | CTNAG | 1 cut(s) | 222 |
| Hsp92II | CATG | 3 cut(s) | 36, 169, 245 |
| Kzo9I | GATC | 1 cut(s) | 208 |
| LpnPI | CCDG | 4 cut(s) | 96, 169, 174, 197 |
| LweI | GCATC | 2 cut(s) | 128, 178 |
| MaeI | CTAG | 1 cut(s) | 89 |
| MaeIII | GTNAC | 3 cut(s) | 190, 217, 258 |
| MalI | GATC | 1 cut(s) | 210 |
| MboI | GATC | 1 cut(s) | 208 |
| MboII | GAAGA | 1 cut(s) | 164 |
| MhlI | GDGCHC | 1 cut(s) | 317 |
| MluCI | AATT | 2 cut(s) | 21, 274 |
| MlyI | GAGTC | 2 cut(s) | 220, 225 |
| MnlI | CCTC | 1 cut(s) | 139 |
| Mph1103I | ATGCAT | 1 cut(s) | 171 |
| MslI | CAYNNNNRTG | 1 cut(s) | 124 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 116, 146, 166 |
| NdeII | GATC | 1 cut(s) | 208 |
| NlaIII | CATG | 3 cut(s) | 36, 169, 245 |
| NmuCI | GTSAC | 3 cut(s) | 190, 217, 258 |
| NsiI | ATGCAT | 1 cut(s) | 171 |
| NspI | RCATGY | 3 cut(s) | 36, 169, 245 |
| PciI | ACATGT | 2 cut(s) | 32, 241 |
| PleI | GAGTC | 2 cut(s) | 220, 224 |
| PpsI | GAGTC | 2 cut(s) | 220, 224 |
| PscI | ACATGT | 2 cut(s) | 32, 241 |
| Psp124BI | GAGCTC | 1 cut(s) | 317 |
| RseI | CAYNNNNRTG | 1 cut(s) | 124 |
| SacI | GAGCTC | 1 cut(s) | 317 |
| Sau3AI | GATC | 1 cut(s) | 208 |
| SchI | GAGTC | 2 cut(s) | 220, 225 |
| SduI | GDGCHC | 1 cut(s) | 317 |
| SetI | ASST | 2 cut(s) | 283, 317 |
| SfaNI | GCATC | 2 cut(s) | 128, 178 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 124 |
| Sse9I | AATT | 2 cut(s) | 21, 274 |
| SspMI | CTAG | 1 cut(s) | 89 |
| SstI | GAGCTC | 1 cut(s) | 317 |
| TaaI | ACNGT | 1 cut(s) | 53 |
| TasI | AATT | 2 cut(s) | 21, 274 |
| TscAI | CASTG | 2 cut(s) | 121, 207 |
| TseFI | GTSAC | 3 cut(s) | 190, 217, 258 |
| Tsp45I | GTSAC | 3 cut(s) | 190, 217, 258 |
| TspRI | CASTG | 2 cut(s) | 121, 207 |
| XceI | RCATGY | 3 cut(s) | 36, 169, 245 |
| XspI | CTAG | 1 cut(s) | 89 |
| Zsp2I | ATGCAT | 1 cut(s) | 171 |