Exosome complex exonuclease RRP46
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G46210 AT3G46210 AT3G46210 AT3G46210 AT3G46210 AT3G46210 AT3G46210 |
| fragaria_vesca | FvH4_2g35660 FvH4_2g35660 FvH4_2g35660 |
| malus_domestica | MD01G1039900.v1.1 MD15G1311800.v1.1 |
| prunus_persica | Prupe.1G449000_v2.0.a1 Prupe.1G449000_v2.0.a1 |
| pyrus_communis | pycom01g06770 pycom15g27540 |
| rosa_chinensis | RchiOBHm_Chr6g0305271 RchiOBHm_Chr6g0306141 |
| rosa_laevigata | RLG00000010820 |
| rosa_multiflora | Rmu_sc0003594.1_g000013 Rmu_ssc0000276.1_g000007 |
| rosa_roxburghii | Rroxscaffold_7G00162010 |
| rosa_rugosa | Rorug06G0347100 |
| rosa_samantha | Rh6AG459600 Rh6BG441400 Rh6DG460300 |
| rosa_wichuraiana | Rw6G039290 Rw6G040060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 312 |
| AciI | CCGC | 1 cut(s) | 122 |
| AclI | AACGTT | 1 cut(s) | 66 |
| AfaI | GTAC | 2 cut(s) | 28, 58 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 122, 123, 151, 185 |
| AgsI | TTSAA | 1 cut(s) | 229 |
| AjnI | CCWGG | 1 cut(s) | 189 |
| AluBI | AGCT | 1 cut(s) | 80 |
| AluI | AGCT | 1 cut(s) | 80 |
| Alw21I | GWGCWC | 1 cut(s) | 82 |
| Alw26I | GTCTC | 1 cut(s) | 37 |
| AoxI | GGCC | 2 cut(s) | 51, 187 |
| AspS9I | GGNCC | 2 cut(s) | 113, 234 |
| AvaII | GGWCC | 2 cut(s) | 113, 234 |
| BanII | GRGCYC | 1 cut(s) | 82 |
| Bbv12I | GWGCWC | 1 cut(s) | 82 |
| BccI | CCATC | 1 cut(s) | 14 |
| BciT130I | CCWGG | 1 cut(s) | 191 |
| BcoDI | GTCTC | 1 cut(s) | 37 |
| Bme1390I | CCNGG | 1 cut(s) | 191 |
| Bme18I | GGWCC | 2 cut(s) | 113, 234 |
| BmgT120I | GGNCC | 2 cut(s) | 113, 234 |
| BmiI | GGNNCC | 1 cut(s) | 115 |
| BmrFI | CCNGG | 1 cut(s) | 191 |
| BmsI | GCATC | 1 cut(s) | 255 |
| BsaI | GGTCTC | 1 cut(s) | 37 |
| BsaJI | CCNNGG | 2 cut(s) | 190, 282 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 122, 123, 151, 185 |
| Bse1I | ACTGG | 3 cut(s) | 37, 54, 93 |
| BseBI | CCWGG | 1 cut(s) | 191 |
| BseDI | CCNNGG | 2 cut(s) | 190, 282 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 122, 123, 151, 185 |
| BseNI | ACTGG | 3 cut(s) | 37, 54, 93 |
| BsgI | GTGCAG | 1 cut(s) | 320 |
| BshFI | GGCC | 2 cut(s) | 53, 189 |
| BsiHKAI | GWGCWC | 1 cut(s) | 82 |
| BslFI | GGGAC | 1 cut(s) | 139 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 122, 123, 151, 185 |
| BsmAI | GTCTC | 1 cut(s) | 37 |
| BsmFI | GGGAC | 1 cut(s) | 139 |
| BsnI | GGCC | 2 cut(s) | 53, 189 |
| Bso31I | GGTCTC | 1 cut(s) | 37 |
| Bsp1286I | GDGCHC | 1 cut(s) | 82 |
| BspACI | CCGC | 1 cut(s) | 122 |
| BspANI | GGCC | 2 cut(s) | 53, 189 |
| BspLI | GGNNCC | 1 cut(s) | 115 |
| BspTNI | GGTCTC | 1 cut(s) | 37 |
| BsrI | ACTGG | 3 cut(s) | 37, 54, 93 |
| BssECI | CCNNGG | 2 cut(s) | 190, 282 |
| Bst2UI | CCWGG | 1 cut(s) | 191 |
| BstC8I | GCNNGC | 1 cut(s) | 157 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 183 |
| BstMAI | GTCTC | 1 cut(s) | 37 |
| BstNI | CCWGG | 1 cut(s) | 191 |
| BstSCI | CCNGG | 1 cut(s) | 189 |
| BsuRI | GGCC | 2 cut(s) | 53, 189 |
| BtsI | GCAGTG | 1 cut(s) | 308 |
| BtsIMutI | CAGTG | 2 cut(s) | 47, 308 |
| Cac8I | GCNNGC | 1 cut(s) | 157 |
| Cfr13I | GGNCC | 2 cut(s) | 113, 234 |
| Csp6I | GTAC | 2 cut(s) | 27, 57 |
| CviAII | CATG | 1 cut(s) | 83 |
| CviJI | RGCY | 6 cut(s) | 53, 80, 87, 155, 178, 189 |
| CviKI_1 | RGCY | 6 cut(s) | 53, 80, 87, 155, 178, 189 |
| CviQI | GTAC | 2 cut(s) | 27, 57 |
| Ecl136II | GAGCTC | 1 cut(s) | 80 |
| Eco24I | GRGCYC | 1 cut(s) | 82 |
| Eco31I | GGTCTC | 1 cut(s) | 37 |
| Eco47I | GGWCC | 2 cut(s) | 113, 234 |
| Eco53kI | GAGCTC | 1 cut(s) | 80 |
| EcoICRI | GAGCTC | 1 cut(s) | 80 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 183 |
| EcoO109I | RGGNCCY | 1 cut(s) | 234 |
| EcoRII | CCWGG | 1 cut(s) | 189 |
| EcoT38I | GRGCYC | 1 cut(s) | 82 |
| FaeI | CATG | 1 cut(s) | 86 |
| FaiI | YATR | 6 cut(s) | 84, 111, 216, 252, 254, 312 |
| FaqI | GGGAC | 1 cut(s) | 139 |
| FatI | CATG | 1 cut(s) | 82 |
| FauI | CCCGC | 1 cut(s) | 115 |
| FriOI | GRGCYC | 1 cut(s) | 82 |
| HaeIII | GGCC | 2 cut(s) | 53, 189 |
| Hin1II | CATG | 1 cut(s) | 86 |
| HinfI | GANTC | 1 cut(s) | 259 |
| Hpy166II | GTNNAC | 1 cut(s) | 29 |
| Hpy8I | GTNNAC | 1 cut(s) | 29 |
| HpyCH4IV | ACGT | 1 cut(s) | 66 |
| HpyCH4V | TGCA | 4 cut(s) | 159, 241, 301, 317 |
| HpySE526I | ACGT | 1 cut(s) | 66 |
| Hsp92II | CATG | 1 cut(s) | 86 |
| LpnPI | CCDG | 9 cut(s) | 35, 50, 67, 106, 159, 171, 176, 203, 281 |
| LweI | GCATC | 1 cut(s) | 255 |
| MaeII | ACGT | 1 cut(s) | 66 |
| MboII | GAAGA | 1 cut(s) | 145 |
| MhlI | GDGCHC | 1 cut(s) | 82 |
| MluCI | AATT | 1 cut(s) | 6 |
| MlyI | GAGTC | 1 cut(s) | 253 |
| MnlI | CCTC | 2 cut(s) | 157, 292 |
| MspR9I | CCNGG | 1 cut(s) | 191 |
| MvaI | CCWGG | 1 cut(s) | 191 |
| NlaIII | CATG | 1 cut(s) | 86 |
| NlaIV | GGNNCC | 1 cut(s) | 115 |
| PleI | GAGTC | 1 cut(s) | 253 |
| PpsI | GAGTC | 1 cut(s) | 253 |
| PpuMI | RGGWCCY | 1 cut(s) | 234 |
| PsiI | TTATAA | 1 cut(s) | 312 |
| Psp124BI | GAGCTC | 1 cut(s) | 82 |
| Psp1406I | AACGTT | 1 cut(s) | 66 |
| Psp5II | RGGWCCY | 1 cut(s) | 234 |
| Psp6I | CCWGG | 1 cut(s) | 189 |
| PspGI | CCWGG | 1 cut(s) | 189 |
| PspN4I | GGNNCC | 1 cut(s) | 115 |
| PspPI | GGNCC | 2 cut(s) | 113, 234 |
| PspPPI | RGGWCCY | 1 cut(s) | 234 |
| RsaI | GTAC | 2 cut(s) | 28, 58 |
| RsaNI | GTAC | 2 cut(s) | 27, 57 |
| SacI | GAGCTC | 1 cut(s) | 82 |
| Sau96I | GGNCC | 2 cut(s) | 113, 234 |
| SchI | GAGTC | 1 cut(s) | 253 |
| ScrFI | CCNGG | 1 cut(s) | 191 |
| SduI | GDGCHC | 1 cut(s) | 82 |
| SetI | ASST | 6 cut(s) | 69, 82, 168, 239, 284, 300 |
| SfaNI | GCATC | 1 cut(s) | 255 |
| SinI | GGWCC | 2 cut(s) | 113, 234 |
| Sse9I | AATT | 1 cut(s) | 6 |
| SsiI | CCGC | 1 cut(s) | 122 |
| SstI | GAGCTC | 1 cut(s) | 82 |
| StyD4I | CCNGG | 1 cut(s) | 189 |
| TaiI | ACGT | 1 cut(s) | 69 |
| TasI | AATT | 1 cut(s) | 6 |
| TatI | WGTACW | 1 cut(s) | 56 |
| TscAI | CASTG | 2 cut(s) | 54, 308 |
| TspDTI | ATGAA | 1 cut(s) | 153 |
| TspRI | CASTG | 2 cut(s) | 54, 308 |
| VpaK11BI | GGWCC | 2 cut(s) | 113, 234 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 183 |