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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G18850 |
| fragaria_vesca | FvH4_5g15370 FvH4_5g15370 |
| malus_domestica | MD14G1195800.v1.1 |
| prunus_persica | Prupe.5G187600_v2.0.a1 Prupe.5G187600_v2.0.a1 |
| pyrus_communis | pycom14g16260 |
| rosa_chinensis | RchiOBHm_Chr7g0180701 |
| rosa_laevigata | RLG00000005239 |
| rosa_multiflora | Rmu_sc0007457.1_g000025 Rmu_sc0023372.1_g000014 Rmu_sc0041667.1_g000001 Rmu_sc0041668.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00272640 |
| rosa_rugosa | Rorug06G0435000 |
| rosa_samantha | Rh7AG036700 Rh7BG036500 Rh7CG038200 Rh7DG036700 |
| rosa_wichuraiana | Rw7G003030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 353 |
| AccII | CGCG | 2 cut(s) | 686, 785 |
| AciI | CCGC | 5 cut(s) | 684, 686, 746, 783, 785 |
| AclWI | GGATC | 1 cut(s) | 583 |
| AcoI | YGGCCR | 3 cut(s) | 33, 519, 1143 |
| AcsI | RAATTY | 1 cut(s) | 484 |
| AcuI | CTGAAG | 1 cut(s) | 929 |
| AfaI | GTAC | 2 cut(s) | 386, 917 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 158, 528, 935 |
| AflII | CTTAAG | 1 cut(s) | 224 |
| AgsI | TTSAA | 6 cut(s) | 109, 601, 862, 973, 1001, 1165 |
| AleI | CACNNNNGTG | 1 cut(s) | 1022 |
| AluBI | AGCT | 6 cut(s) | 143, 190, 223, 235, 1154, 1169 |
| AluI | AGCT | 6 cut(s) | 143, 190, 223, 235, 1154, 1169 |
| Alw21I | GWGCWC | 1 cut(s) | 192 |
| AlwI | GGATC | 1 cut(s) | 583 |
| AoxI | GGCC | 5 cut(s) | 33, 519, 693, 937, 1143 |
| ApeKI | GCWGC | 3 cut(s) | 143, 743, 1134 |
| ApoI | RAATTY | 1 cut(s) | 484 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1005 |
| AspS9I | GGNCC | 1 cut(s) | 938 |
| AsuHPI | GGTGA | 5 cut(s) | 292, 601, 661, 844, 889 |
| AsuII | TTCGAA | 1 cut(s) | 482 |
| AsuNHI | GCTAGC | 1 cut(s) | 635 |
| AxyI | CCTNAGG | 1 cut(s) | 930 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 827, 860 |
| BalI | TGGCCA | 2 cut(s) | 521, 1145 |
| BanII | GRGCYC | 2 cut(s) | 192, 460 |
| Bbv12I | GWGCWC | 1 cut(s) | 192 |
| BbvI | GCAGC | 3 cut(s) | 130, 730, 1121 |
| BccI | CCATC | 5 cut(s) | 67, 143, 341, 764, 868 |
| BfaI | CTAG | 2 cut(s) | 339, 636 |
| BfrI | CTTAAG | 1 cut(s) | 224 |
| BisI | GCNGC | 4 cut(s) | 144, 684, 744, 1135 |
| BlsI | GCNGC | 4 cut(s) | 145, 685, 745, 1136 |
| BmgT120I | GGNCC | 1 cut(s) | 938 |
| BmiI | GGNNCC | 3 cut(s) | 940, 990, 1108 |
| BmrI | ACTGGG | 2 cut(s) | 239, 1029 |
| BmsI | GCATC | 4 cut(s) | 409, 616, 962, 1069 |
| BmtI | GCTAGC | 1 cut(s) | 639 |
| BmuI | ACTGGG | 2 cut(s) | 239, 1029 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 913, 945, 1028, 1060 |
| Bpu14I | TTCGAA | 1 cut(s) | 482 |
| BpuEI | CTTGAG | 1 cut(s) | 314 |
| BsaJI | CCNNGG | 4 cut(s) | 24, 684, 783, 1116 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 158, 528, 935 |
| Bse1I | ACTGG | 3 cut(s) | 245, 696, 1024 |
| Bse21I | CCTNAGG | 1 cut(s) | 930 |
| Bse3DI | GCAATG | 1 cut(s) | 5 |
| BseDI | CCNNGG | 4 cut(s) | 24, 684, 783, 1116 |
| BseGI | GGATG | 4 cut(s) | 403, 424, 1039, 1060 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 158, 528, 935 |
| BseMI | GCAATG | 1 cut(s) | 5 |
| BseMII | CTCAG | 2 cut(s) | 153, 944 |
| BseNI | ACTGG | 3 cut(s) | 245, 696, 1024 |
| BseRI | GAGGAG | 1 cut(s) | 541 |
| BseX3I | CGGCCG | 1 cut(s) | 33 |
| BseXI | GCAGC | 3 cut(s) | 130, 730, 1121 |
| Bsh1236I | CGCG | 2 cut(s) | 686, 785 |
| Bsh1285I | CGRYCG | 1 cut(s) | 36 |
| BshFI | GGCC | 5 cut(s) | 35, 521, 695, 939, 1145 |
| BsiEI | CGRYCG | 1 cut(s) | 36 |
| BsiHKAI | GWGCWC | 1 cut(s) | 192 |
| BslFI | GGGAC | 1 cut(s) | 25 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 158, 528, 935 |
| BsmFI | GGGAC | 1 cut(s) | 25 |
| BsnI | GGCC | 5 cut(s) | 35, 521, 695, 939, 1145 |
| Bsp119I | TTCGAA | 1 cut(s) | 482 |
| Bsp1286I | GDGCHC | 2 cut(s) | 192, 460 |
| Bsp143I | GATC | 3 cut(s) | 568, 575, 594 |
| BspACI | CCGC | 5 cut(s) | 684, 686, 746, 783, 785 |
| BspANI | GGCC | 5 cut(s) | 35, 521, 695, 939, 1145 |
| BspCNI | CTCAG | 2 cut(s) | 152, 943 |
| BspFNI | CGCG | 2 cut(s) | 686, 785 |
| BspLI | GGNNCC | 3 cut(s) | 940, 990, 1108 |
| BspOI | GCTAGC | 1 cut(s) | 639 |
| BspPI | GGATC | 1 cut(s) | 583 |
| BspT104I | TTCGAA | 1 cut(s) | 482 |
| BspTI | CTTAAG | 1 cut(s) | 224 |
| BsrDI | GCAATG | 1 cut(s) | 5 |
| BsrI | ACTGG | 3 cut(s) | 245, 696, 1024 |
| BssECI | CCNNGG | 4 cut(s) | 24, 684, 783, 1116 |
| BssMI | GATC | 3 cut(s) | 568, 575, 594 |
| BssNAI | GTATAC | 1 cut(s) | 354 |
| BssT1I | CCWWGG | 2 cut(s) | 24, 1116 |
| Bst1107I | GTATAC | 1 cut(s) | 354 |
| Bst4CI | ACNGT | 1 cut(s) | 840 |
| Bst6I | CTCTTC | 2 cut(s) | 784, 1071 |
| BstAFI | CTTAAG | 1 cut(s) | 224 |
| BstBI | TTCGAA | 1 cut(s) | 482 |
| BstC8I | GCNNGC | 2 cut(s) | 637, 937 |
| BstDEI | CTNAG | 4 cut(s) | 139, 611, 725, 930 |
| BstDSI | CCRYGG | 2 cut(s) | 684, 783 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 933 |
| BstF5I | GGATG | 4 cut(s) | 403, 424, 1039, 1060 |
| BstFNI | CGCG | 2 cut(s) | 686, 785 |
| BstKTI | GATC | 3 cut(s) | 571, 578, 597 |
| BstMBI | GATC | 3 cut(s) | 568, 575, 594 |
| BstMCI | CGRYCG | 1 cut(s) | 36 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 464, 680, 692, 740, 1151 |
| BstUI | CGCG | 2 cut(s) | 686, 785 |
| BstV1I | GCAGC | 3 cut(s) | 130, 730, 1121 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 50 |
| BstZ17I | GTATAC | 1 cut(s) | 354 |
| BstZI | CGGCCG | 1 cut(s) | 33 |
| Bsu36I | CCTNAGG | 1 cut(s) | 930 |
| BsuRI | GGCC | 5 cut(s) | 35, 521, 695, 939, 1145 |
| BtgI | CCRYGG | 2 cut(s) | 684, 783 |
| BtsCI | GGATG | 4 cut(s) | 403, 424, 1039, 1060 |
| BtsIMutI | CAGTG | 3 cut(s) | 220, 703, 1017 |
| Cac8I | GCNNGC | 2 cut(s) | 637, 937 |
| Cfr13I | GGNCC | 1 cut(s) | 938 |
| Cfr42I | CCGCGG | 2 cut(s) | 687, 786 |
| Csp6I | GTAC | 2 cut(s) | 385, 916 |
| CviAII | CATG | 2 cut(s) | 388, 730 |
| CviQI | GTAC | 2 cut(s) | 385, 916 |
| DdeI | CTNAG | 4 cut(s) | 139, 611, 725, 930 |
| DpnI | GATC | 3 cut(s) | 570, 577, 596 |
| DpnII | GATC | 3 cut(s) | 568, 575, 594 |
| EaeI | YGGCCR | 3 cut(s) | 33, 519, 1143 |
| EagI | CGGCCG | 1 cut(s) | 33 |
| Eam1104I | CTCTTC | 2 cut(s) | 784, 1071 |
| EarI | CTCTTC | 2 cut(s) | 784, 1071 |
| Ecl136II | GAGCTC | 1 cut(s) | 190 |
| EclXI | CGGCCG | 1 cut(s) | 33 |
| Eco130I | CCWWGG | 2 cut(s) | 24, 1116 |
| Eco24I | GRGCYC | 2 cut(s) | 192, 460 |
| Eco52I | CGGCCG | 1 cut(s) | 33 |
| Eco53kI | GAGCTC | 1 cut(s) | 190 |
| Eco57I | CTGAAG | 1 cut(s) | 929 |
| Eco81I | CCTNAGG | 1 cut(s) | 930 |
| EcoICRI | GAGCTC | 1 cut(s) | 190 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 933 |
| EcoO109I | RGGNCCY | 1 cut(s) | 938 |
| EcoRI | GAATTC | 1 cut(s) | 484 |
| EcoT14I | CCWWGG | 2 cut(s) | 24, 1116 |
| EcoT38I | GRGCYC | 2 cut(s) | 192, 460 |
| ErhI | CCWWGG | 2 cut(s) | 24, 1116 |
| FaeI | CATG | 2 cut(s) | 391, 733 |
| FaqI | GGGAC | 1 cut(s) | 25 |
| FatI | CATG | 2 cut(s) | 387, 729 |
| FauNDI | CATATG | 1 cut(s) | 766 |
| FblI | GTMKAC | 1 cut(s) | 353 |
| Fnu4HI | GCNGC | 4 cut(s) | 144, 684, 744, 1135 |
| FokI | GGATG | 4 cut(s) | 410, 431, 1046, 1047 |
| FriOI | GRGCYC | 2 cut(s) | 192, 460 |
| Fsp4HI | GCNGC | 4 cut(s) | 144, 684, 744, 1135 |
| FspBI | CTAG | 2 cut(s) | 339, 636 |
| GluI | GCNGC | 4 cut(s) | 144, 684, 744, 1135 |
| HaeIII | GGCC | 5 cut(s) | 35, 521, 695, 939, 1145 |
| Hin1II | CATG | 2 cut(s) | 391, 733 |
| HincII | GTYRAC | 1 cut(s) | 334 |
| HindII | GTYRAC | 1 cut(s) | 334 |
| HindIII | AAGCTT | 1 cut(s) | 221 |
| HinfI | GANTC | 6 cut(s) | 38, 89, 182, 283, 335, 706 |
| HphI | GGTGA | 5 cut(s) | 292, 601, 661, 844, 889 |
| Hpy166II | GTNNAC | 2 cut(s) | 334, 354 |
| Hpy188I | TCNGA | 7 cut(s) | 64, 187, 462, 568, 575, 583, 1011 |
| Hpy188III | TCNNGA | 5 cut(s) | 80, 293, 598, 1064, 1073 |
| Hpy8I | GTNNAC | 2 cut(s) | 334, 354 |
| Hpy99I | CGWCG | 1 cut(s) | 583 |
| HpyAV | CCTTC | 5 cut(s) | 367, 388, 649, 685, 967 |
| HpyCH4III | ACNGT | 1 cut(s) | 840 |
| HpyCH4V | TGCA | 5 cut(s) | 467, 799, 1017, 1049, 1060 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 464, 680, 692, 740, 1151 |
| HpyF3I | CTNAG | 4 cut(s) | 139, 611, 725, 930 |
| Hsp92II | CATG | 2 cut(s) | 391, 733 |
| KspI | CCGCGG | 2 cut(s) | 687, 786 |
| Kzo9I | GATC | 3 cut(s) | 568, 575, 594 |
| LmnI | GCTCC | 1 cut(s) | 15 |
| Lsp1109I | GCAGC | 3 cut(s) | 130, 730, 1121 |
| LweI | GCATC | 4 cut(s) | 409, 616, 962, 1069 |
| MaeI | CTAG | 2 cut(s) | 339, 636 |
| MaeIII | GTNAC | 1 cut(s) | 750 |
| MalI | GATC | 3 cut(s) | 570, 577, 596 |
| MboI | GATC | 3 cut(s) | 568, 575, 594 |
| MboII | GAAGA | 7 cut(s) | 241, 310, 730, 771, 922, 1013, 1088 |
| MhlI | GDGCHC | 2 cut(s) | 192, 460 |
| MlsI | TGGCCA | 2 cut(s) | 521, 1145 |
| MluCI | AATT | 6 cut(s) | 103, 287, 446, 484, 513, 1039 |
| MluNI | TGGCCA | 2 cut(s) | 521, 1145 |
| MlyI | GAGTC | 3 cut(s) | 47, 329, 715 |
| MmeI | TCCRAC | 2 cut(s) | 414, 561 |
| Mox20I | TGGCCA | 2 cut(s) | 521, 1145 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1005 |
| MscI | TGGCCA | 2 cut(s) | 521, 1145 |
| MseI | TTAA | 3 cut(s) | 225, 249, 1177 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1022 |
| Msp20I | TGGCCA | 2 cut(s) | 521, 1145 |
| MspA1I | CMGCKG | 3 cut(s) | 143, 686, 785 |
| MspCI | CTTAAG | 1 cut(s) | 224 |
| MvnI | CGCG | 2 cut(s) | 686, 785 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 464, 680, 692, 740, 1151 |
| NdeI | CATATG | 1 cut(s) | 766 |
| NdeII | GATC | 3 cut(s) | 568, 575, 594 |
| NheI | GCTAGC | 1 cut(s) | 635 |
| NlaIII | CATG | 2 cut(s) | 391, 733 |
| NlaIV | GGNNCC | 3 cut(s) | 940, 990, 1108 |
| NmeAIII | GCCGAG | 1 cut(s) | 61 |
| NspV | TTCGAA | 1 cut(s) | 482 |
| OliI | CACNNNNGTG | 1 cut(s) | 1022 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1005 |
| PfeI | GAWTC | 3 cut(s) | 89, 182, 283 |
| PkrI | GCNGC | 4 cut(s) | 145, 685, 745, 1136 |
| PleI | GAGTC | 3 cut(s) | 46, 329, 714 |
| PpsI | GAGTC | 3 cut(s) | 46, 329, 714 |
| Psp124BI | GAGCTC | 1 cut(s) | 192 |
| PspN4I | GGNNCC | 3 cut(s) | 940, 990, 1108 |
| PspPI | GGNCC | 1 cut(s) | 938 |
| PvuII | CAGCTG | 1 cut(s) | 143 |
| RsaI | GTAC | 2 cut(s) | 386, 917 |
| RsaNI | GTAC | 2 cut(s) | 385, 916 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1022 |
| SacI | GAGCTC | 1 cut(s) | 192 |
| SacII | CCGCGG | 2 cut(s) | 687, 786 |
| SaqAI | TTAA | 3 cut(s) | 225, 249, 1177 |
| SatI | GCNGC | 4 cut(s) | 144, 684, 744, 1135 |
| Sau3AI | GATC | 3 cut(s) | 568, 575, 594 |
| Sau96I | GGNCC | 1 cut(s) | 938 |
| SchI | GAGTC | 3 cut(s) | 47, 329, 715 |
| SduI | GDGCHC | 2 cut(s) | 192, 460 |
| SfaNI | GCATC | 4 cut(s) | 409, 616, 962, 1069 |
| Sfr303I | CCGCGG | 2 cut(s) | 687, 786 |
| SfuI | TTCGAA | 1 cut(s) | 482 |
| SgrBI | CCGCGG | 2 cut(s) | 687, 786 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1022 |
| SmlI | CTYRAG | 2 cut(s) | 224, 293 |
| SmoI | CTYRAG | 2 cut(s) | 224, 293 |
| Sse9I | AATT | 6 cut(s) | 103, 287, 446, 484, 513, 1039 |
| SsiI | CCGC | 5 cut(s) | 684, 686, 746, 783, 785 |
| SspMI | CTAG | 2 cut(s) | 339, 636 |
| SstI | GAGCTC | 1 cut(s) | 192 |
| StyI | CCWWGG | 2 cut(s) | 24, 1116 |
| TaaI | ACNGT | 1 cut(s) | 840 |
| TaqI | TCGA | 2 cut(s) | 120, 482 |
| TaqII | GACCGA | 1 cut(s) | 194 |
| TasI | AATT | 6 cut(s) | 103, 287, 446, 484, 513, 1039 |
| TatI | WGTACW | 1 cut(s) | 384 |
| TauI | GCSGC | 1 cut(s) | 686 |
| TfiI | GAWTC | 3 cut(s) | 89, 182, 283 |
| Tru1I | TTAA | 3 cut(s) | 225, 249, 1177 |
| Tru9I | TTAA | 3 cut(s) | 225, 249, 1177 |
| TscAI | CASTG | 3 cut(s) | 220, 703, 1024 |
| TseI | GCWGC | 3 cut(s) | 143, 743, 1134 |
| TspRI | CASTG | 3 cut(s) | 220, 703, 1024 |
| Vha464I | CTTAAG | 1 cut(s) | 224 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 933 |
| XapI | RAATTY | 1 cut(s) | 484 |
| XmiI | GTMKAC | 1 cut(s) | 353 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1005 |
| XspI | CTAG | 2 cut(s) | 339, 636 |