RchiOBHm_Chr7g0186991

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
6795848 .. 6796068
221 bp
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UTR
Exon/CDS
Intron
PRQ16691

Sequence Viewer

Length: 138 bp
ATGGTGAACCTGTTGAGTATTTGCTACGGGTGGTTTGGAGCTTCCGGTGGCAGGTTCGGTAGGTTTCCGGCCTGTTCTGGTTGTTCTGCCACCGGTTATGGACTCCTGGTGTGGAGGGCTTCATGGTGTGAGGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

45

Amino Acids

4.8

Weight (kDa)

8.5

Isoelectric Point (pI)

24.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 42
AfiI CCNNNNNNNGG 1 cut(s) 51
AgeI ACCGGT 1 cut(s) 92
AjnI CCWGG 1 cut(s) 105
AluBI AGCT 1 cut(s) 41
AluI AGCT 1 cut(s) 41
AoxI GGCC 1 cut(s) 69
AsiGI ACCGGT 1 cut(s) 92
AsuHPI GGTGA 1 cut(s) 16
BciT130I CCWGG 1 cut(s) 107
BfuAI ACCTGC 1 cut(s) 42
Bme1390I CCNGG 1 cut(s) 107
BmrFI CCNGG 1 cut(s) 107
BsaWI WCCGGW 2 cut(s) 44, 92
Bsc4I CCNNNNNNNGG 1 cut(s) 51
Bse118I RCCGGY 1 cut(s) 92
BseBI CCWGG 1 cut(s) 107
BseLI CCNNNNNNNGG 1 cut(s) 51
BshFI GGCC 1 cut(s) 71
BshTI ACCGGT 1 cut(s) 92
BsiSI CCGG 3 cut(s) 45, 68, 93
BslI CCNNNNNNNGG 1 cut(s) 51
BsnI GGCC 1 cut(s) 71
BspANI GGCC 1 cut(s) 71
BspMI ACCTGC 1 cut(s) 42
BsrFI RCCGGY 1 cut(s) 92
BssAI RCCGGY 1 cut(s) 92
Bst2UI CCWGG 1 cut(s) 107
BstNI CCWGG 1 cut(s) 107
BstSCI CCNGG 1 cut(s) 105
BsuRI GGCC 1 cut(s) 71
BveI ACCTGC 1 cut(s) 42
Cfr10I RCCGGY 1 cut(s) 92
CspAI ACCGGT 1 cut(s) 92
CviAII CATG 1 cut(s) 123
CviJI RGCY 3 cut(s) 41, 71, 119
CviKI_1 RGCY 3 cut(s) 41, 71, 119
EcoRII CCWGG 1 cut(s) 105
FaeI CATG 1 cut(s) 126
FaiI YATR 2 cut(s) 99, 124
FatI CATG 1 cut(s) 122
HaeIII GGCC 1 cut(s) 71
HapII CCGG 3 cut(s) 45, 68, 93
Hin1II CATG 1 cut(s) 126
HinfI GANTC 1 cut(s) 102
HpaII CCGG 3 cut(s) 45, 68, 93
HphI GGTGA 1 cut(s) 16
Hpy166II GTNNAC 1 cut(s) 7
Hpy8I GTNNAC 1 cut(s) 7
Hsp92II CATG 1 cut(s) 126
LmnI GCTCC 1 cut(s) 38
LpnPI CCDG 9 cut(s) 23, 37, 58, 63, 81, 85, 92, 106, 119
MlyI GAGTC 1 cut(s) 96
MnlI CCTC 2 cut(s) 108, 124
MspI CCGG 3 cut(s) 45, 68, 93
MspR9I CCNGG 1 cut(s) 107
MvaI CCWGG 1 cut(s) 107
NlaIII CATG 1 cut(s) 126
PinAI ACCGGT 1 cut(s) 92
PleI GAGTC 1 cut(s) 96
PpsI GAGTC 1 cut(s) 96
Psp6I CCWGG 1 cut(s) 105
PspGI CCWGG 1 cut(s) 105
SchI GAGTC 1 cut(s) 96
ScrFI CCNGG 1 cut(s) 107
SetI ASST 4 cut(s) 12, 43, 56, 65
StyD4I CCNGG 1 cut(s) 105
TspDTI ATGAA 1 cut(s) 111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.