RchiOBHm_Chr7g0215861

Fanconi anemia group J protein homolog

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
33508816 .. 33519314
10499 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19312

Sequence Viewer

Length: 3930 bp
ATGACCCTAGCATTTTCCGCTCTTTTCTTTTTCTCATTCTTCCCCATACATAAGAGACTCTTCATTCTTCACTCTGCAGTTTTCTCAAGTTTCCCGCGGCACACAAAAAAAAGAAGAAAAGAAAAAATGGCGTGTGCAACTCCGGGAGCAAACCCTAAAAGCTCATCGAAAAGCTCGTACCGCATCGGAGGCATCGATGTGGAGTTCCCGTACCAGCCGTACGCGGCGCAGATGGCGTTCATGAGCAGAGTCGTCTCCACTCTCGATCGAGCTGTCAGGGACGACCACTGCCACGCCTTGCTCGAGTCTCCCACCGGAACCGGCAAATCGCTCTCTCTTCTCTGCTCCATCCTCGCCTGGCAGCAGAGCTTCAAGGCCAAGAATATGTACGCCAATCTCTCCCATTCCAAGCCCAACCCCAAGGCCATGACCGATCCCATCGCCCACGGCGGCGGCTTTGTTCCCGAAGAGGAGCACTCCAGTGCTCAGCCATCGGAAAAGCCAGGGCCGTCTCAATCTGAAAATAGGAAGAAAAAGGAAGCTCCTACCATATACTATGCATCGAGGACACATTCACAAATTTCTCAAGTCATCCGTGAATATCGGAAAACTTCCTACCGGGTGCCTATGGCAGTACTGGCCTCTAGGAAGCATTACTGCACAAATGCACAAGTACATGGGAGAGAGAATATTGACGAAGAATGTAAGCTTCTTTTGAAGGATCGAGTGGTTGGATGCGTAGAATTTAAAAACGTACACAAAGTCAAAGGACATCCATCTCTTCAGAAAGGAGGCTGCCACGAGGCCTACGATATTGAGGATCTCGTGAAAGTTGGAAAAGTTGTCAAAGGTTGTTCATATTATGCCGCTCGTTCTATGTCAGACGATGCAGAACTGGTTTTTTGTCCATATAACTACATCATTAATCCAGTCATTAGGGGAGCCATGGAAGTAGATATTCAGGGGTCCATTGTAGTTCTGGATGAAGCCCACAATATAGAGGATGTTGCTCGCGATGCTGGTAGTGTAGATATTGATGAAGAAGTTTTGAACAAATTGCAGATGGAACTAGAGCAGCTTTGCCCACTGGATGTTTTGGTTTACCAACCTCTGTATGAAATGATACAGGACCTCTTAAGTTGGATTGAGCGAAGGAAAGACAAGTTAGAAAAGCGCGAATTTCAGCACTTTGTGTCTTGTTGGACTGGTGACAAGGCTTTGAGAGAGCTTCAGGAAGCTAATATATCACAGCAGTGCTTCCCAGTCTTACTTGAATGTGCCACAAAGGCAATCAAAGCTGCTACAGATAAAGAATCAGAGGTAGCCCATTTAAGTGGCATGGCTGTTGTGACATTGGAAGGATTGTTCTCTTCACTTACTTACTTCTTCTCAAGAAATGGGTCTCATATGGTCGATTATCAGCTTGCTTTACAGAGATATGTTAAAAGAGATGTTGGAACTTTTGGCGATTGGACACATACATTCAGTTTGTGGTGCTTGAATCCTGCTGTTGTGTTTCAAGATATTGCCAATCTTTCCTTGTCAGTCATTTTAACATCGGGGACTTTGTCACCAATGAATTCCTTTTCATCTGAGCTTGGCCTTCAGTTTGGAAGTACTCTGGAAGCTCCCCATGTAATTGATGTTGAATCACAGGTTTGGCCCACTATTATTTCTACTGGCCCAGGTAATGTGCCATTGAATGCAAGTTATAAGACAGCAGATGAATATGCCTTCCAGGATGCACTTGGAAAATCCTTAGAGGAAATTTTCAAAAGTGTGCCGGCTGGGTGTCTTGTCTTCTTCCCAAGTTACAAGCTAATGGGGAAGTTATGCAAGCGTTGGCGTGAAACAGGACAATGGTCTCTGCTAAACGAAAGAAAGTCCCTTTTTATTGAGCCCGGTGGAGACCAGGAGGAATTTGAGTTTGTACTGAAGGGTTATTATGATTCAATTCGTGGGGGCAATAAGCCTGCTTTTGGGAGAAATAAAGGTGCTAACAAGAAATTAAGACAAAGTAGCTTCACTGCAGTCAAGTGTGCACAAAAGAATAACACTGATGGAGCTGCTTTACTGGCTGTGTGCCGAGGAAAGGTTTCAGAAGGAATCGACTTCACAGATGACAATGCTCGGGCTGTGATAATTGTGGGAATTCCATTTCCCAACATGAATGACATCAAGATTTCCTTAAAGAAGAAATACAATGATGCATATAAGTCATCCAAGGGCTTTCTGAGTGGAAATGAATGGTACTGTCACCAAGCCTTCCGAGCTTTAAATCAAGCTGCAGGACGTTGTATTCGACATAGGTTTGATTATGGAGCTGTCATCTTATTAGATGAACGTTATCAGGTAGGAAGAAATACAGCATATGTGTCAAAGTGGCTAAAGAAATCCATTAGACAGTATGAAAGCTTTGACACGTCAATAGAGGAATTAAAATCCTTTTTCAACAATGTCAAGGAAAGGGTAAGCAAGAATATGGTCAATGTGTCACAGAGTTCTGAGACTAGAGAGAAAATCATTCTTTCTATGGATCACAGTAAAGGGTTTACAAGACTGAAAGATCAGAATTTGAATAAATCTGATCCTCAGGGACAGACAAAAACTTATGTAGGCAAGCACGATTCTCTACTGACATCTCAAGATGATCTTGATGTATCATCACGAATGGATGTATATGCTGACAATAGCAAGGACTTTATCAATATCAGATCTACTCCTCAGAAAGATACAAGGTACCTTAAGCCATCTTTGTCCATGTCATTCTCTGATGCAGATCCAGACATCTCAGTTGTCAATGAAACCCCTTGTATGGATGGCATCTTTTCCACGTGCAGTCCAGGATCAATTACTAAGGATGAGAAGTGCTGTTTGACTTCGACTACAATTGAGTCCTCTTCTTTCTTTTTGGACCAATTCTCATTCCAATCAACATCATTAACCAATTGTAGCAAGGCTTCTCCAAAGGGCCAGTGTTCTGTAGCCGCTACTCCTGAAAAGAATGCAACTTTGAACTCTTACAGCTCAATGACAGAAACAGAATCATCTTTGGATTTGAGTGTTAATTCTCATATCCAGAAAAGGAGAAAGTCCATATATCAATCCTTGGTTAACTCCAGTCAGGGACAGTCTGGTGGTGCTCCTGATTCTGAAACTTCTGATTGTCCTGATTCCGTAAAAGAGACGATGACCAGTGGAGATGCCATTCGCAAAATTGAATTTAATGAATCTAATTATTCAGAGCACTATTGTAAGTCCATAGTTCATCATCTTCCCCCGAGTACTTGTGGCACTTCATCTGTGTCAGTTGGTTCTGTCATGGACAAGAGACTAGAAATCTGTTGCTCACTCTGCAAAAGCCCATTGGGCCTTCCTGAGAATAATCTACATGTTACATGCTCAATAACTTCATCATCGAAACTTTACTTGGAATCTCTTCATAACGAAATATTGAAATCTCAAACTGGGAATACATCAGCAGGCATACGTGTTCTCATAACTGACATTTCATCAGTTGATTATCGAGTCTGCCATGAAATTTCTGAAGGCACTCCTGGACAGGGTGTATGGTGTGAAAAAGATGGGTTTGTTTTCGGTACCATCTTGTGCCCCTTTTGCCGTCACCACAAGAGTAGCCACGATAATTTCCTTGGCGTACAGGTCATGGCAACTAATGCATCAAATGTTCATTTACTCAACAAGATCATGTTTTACTTAGATCAGTTGGAAATTACAAATTTTGAGGCATCTTCTGACAAGGCTACAAAAGACAAAGATTTCTTGCCTGTTAATGGTTCCAACGTCGACAAAGTTGCCATTCTCAATCCCTTTGATAAATTCTCGTACTCTCCAGTACAGCAGGACCAAGGAGGATGGAGGACTACAAAATCAAAGCTTAAACTACCCAAAAGACCCTCACGTTCCTGA

Protein Analysis

1309

Amino Acids

146.01

Weight (kDa)

8.06

Isoelectric Point (pI)

46.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD_2 PF06733 186 - 349 3.5e-44 DEAD_2
Helicase_C_2 PF13307 588 - 798 5.4e-51 Helicase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1713
Acc65I GGTACC 2 cut(s) 2739, 3599
AccB1I GGYRCC 3 cut(s) 622, 2739, 3599
AccBSI CCGCTC 2 cut(s) 20, 869
AccI GTMKAC 1 cut(s) 3807
AccII CGCG 4 cut(s) 97, 224, 1014, 1176
AciI CCGC 9 cut(s) 18, 95, 97, 181, 224, 450, 453, 867, 2988
AclI AACGTT 1 cut(s) 2344
AclWI GGATC 7 cut(s) 428, 729, 828, 2544, 2582, 2774, 2854
AcuI CTGAAG 5 cut(s) 767, 1214, 1589, 1955, 3567
AcvI CACGTG 1 cut(s) 2835
AdeI CACNNNGTG 1 cut(s) 1192
AfiI CCNNNNNNNGG 5 cut(s) 1979, 2092, 2815, 3563, 3794
AflII CTTAAG 2 cut(s) 1135, 2744
AflIII ACRYGT 3 cut(s) 2421, 3391, 3490
AjiI CACGTC 1 cut(s) 2424
AjnI CCWGG 7 cut(s) 356, 502, 1684, 1737, 1911, 2842, 3556
AjuI GAANNNNNNNTTGG 2 cut(s) 3413, 3445
AleI CACNNNNGTG 2 cut(s) 480, 1252
AloI GAACNNNNNNTCC 2 cut(s) 1349, 1381
Alw21I GWGCWC 5 cut(s) 477, 487, 2044, 3145, 3249
Alw44I GTGCAC 1 cut(s) 2040
AlwI GGATC 7 cut(s) 428, 729, 828, 2544, 2582, 2774, 2854
Ama87I CYCGRG 3 cut(s) 302, 2130, 3280
ApaLI GTGCAC 1 cut(s) 2040
ApeKI GCWGC 6 cut(s) 361, 795, 1075, 1298, 2066, 2285
ArsI GACNNNNNNTTYG 2 cut(s) 2283, 2315
AseI ATTAAT 1 cut(s) 924
Asp700I GAANNNNTTC 2 cut(s) 2095, 3438
Asp718I GGTACC 2 cut(s) 2739, 3599
AspLEI GCGC 2 cut(s) 229, 1176
AspS9I GGNCC 9 cut(s) 506, 966, 1129, 1662, 1682, 2914, 2971, 3370, 3865
AsuC2I CCSGG 3 cut(s) 144, 620, 1902
AsuHPI GGTGA 4 cut(s) 1220, 1563, 2249, 3617
AvaI CYCGRG 3 cut(s) 302, 2130, 3280
AvaII GGWCC 4 cut(s) 966, 1129, 2914, 3865
AxyI CCTNAGG 1 cut(s) 2592
BaeGI GKGCMC 2 cut(s) 2044, 3614
BanI GGYRCC 3 cut(s) 622, 2739, 3599
BanII GRGCYC 1 cut(s) 1902
BarI GAAGNNNNNNTAC 2 cut(s) 2944, 2976
BauI CACGAG 2 cut(s) 800, 824
BbrPI CACGTG 1 cut(s) 2835
BbsI GAAGAC 1 cut(s) 1792
Bbv12I GWGCWC 5 cut(s) 477, 487, 2044, 3145, 3249
BbvI GCAGC 6 cut(s) 373, 782, 1087, 1285, 2053, 2272
BceAI ACGGC 4 cut(s) 202, 463, 493, 3606
BcgI CGANNNNNNTGC 2 cut(s) 3797, 3831
BciT130I CCWGG 7 cut(s) 358, 504, 1686, 1739, 1913, 2844, 3558
BcnI CCSGG 3 cut(s) 144, 620, 1902
BfaI CTAG 5 cut(s) 8, 645, 1070, 2511, 3335
BfmI CTRYAG 5 cut(s) 75, 1302, 2028, 2286, 2982
BfrI CTTAAG 2 cut(s) 1135, 2744
BglI GCCNNNNNGGC 2 cut(s) 1286, 3369
BglII AGATCT 1 cut(s) 2714
BlpI GCTNAGC 1 cut(s) 486
BmcAI AGTACT 3 cut(s) 636, 1618, 3286
Bme18I GGWCC 4 cut(s) 966, 1129, 2914, 3865
BmeT110I CYCGRG 3 cut(s) 302, 2130, 3280
BmgBI CACGTC 1 cut(s) 2424
BmgT120I GGNCC 9 cut(s) 506, 966, 1129, 1662, 1682, 2914, 2971, 3370, 3865
BmiI GGNNCC 7 cut(s) 319, 624, 943, 967, 2741, 3601, 3799
BmrI ACTGGG 2 cut(s) 1256, 3477
BmuI ACTGGG 2 cut(s) 1256, 3477
BoxI GACNNNNGTC 1 cut(s) 1861
BpiI GAAGAC 1 cut(s) 1792
BplI GAGNNNNNCTC 2 cut(s) 461, 493
BpmI CTGGAG 3 cut(s) 463, 3103, 3837
Bpu1102I GCTNAGC 1 cut(s) 486
BpuEI CTTGAG 4 cut(s) 70, 570, 1375, 2628
BpuMI CCSGG 3 cut(s) 144, 620, 1902
Bsa29I ATCGAT 1 cut(s) 195
BsaAI YACGTR 2 cut(s) 2835, 3491
BsaBI GATNNNNATC 1 cut(s) 2778
BsaI GGTCTC 3 cut(s) 1407, 1869, 1902
BsaWI WCCGGW 1 cut(s) 314
BsaXI ACNNNNNCTCC 2 cut(s) 194, 224
Bsc4I CCNNNNNNNGG 5 cut(s) 1979, 2092, 2815, 3563, 3794
Bse118I RCCGGY 2 cut(s) 320, 1783
Bse21I CCTNAGG 1 cut(s) 2592
Bse8I GATNNNNATC 1 cut(s) 2778
BseBI CCWGG 7 cut(s) 358, 504, 1686, 1739, 1913, 2844, 3558
BseCI ATCGAT 1 cut(s) 195
BseJI GATNNNNATC 1 cut(s) 2778
BseLI CCNNNNNNNGG 5 cut(s) 1979, 2092, 2815, 3563, 3794
BseMII CTCAG 8 cut(s) 500, 1584, 2225, 2496, 2606, 2738, 2805, 3369
BseRI GAGGAG 2 cut(s) 485, 2712
BseSI GKGCMC 2 cut(s) 2044, 3614
BseXI GCAGC 6 cut(s) 373, 782, 1087, 1285, 2053, 2272
BseYI CCCAGC 1 cut(s) 1787
BsgI GTGCAG 2 cut(s) 643, 2857
Bsh1236I CGCG 4 cut(s) 97, 224, 1014, 1176
Bsh1285I CGRYCG 1 cut(s) 268
BshNI GGYRCC 3 cut(s) 622, 2739, 3599
BshVI ATCGAT 1 cut(s) 195
BsiEI CGRYCG 1 cut(s) 268
BsiHKAI GWGCWC 5 cut(s) 477, 487, 2044, 3145, 3249
BsiHKCI CYCGRG 3 cut(s) 302, 2130, 3280
BsiSI CCGG 6 cut(s) 143, 315, 321, 619, 1784, 1902
BsiWI CGTACG 1 cut(s) 219
BslFI GGGAC 5 cut(s) 293, 1576, 1870, 2610, 3141
BslI CCNNNNNNNGG 5 cut(s) 1979, 2092, 2815, 3563, 3794
BsmBI CGTCTC 3 cut(s) 259, 516, 3179
BsmFI GGGAC 5 cut(s) 293, 1576, 1870, 2610, 3141
BsmI GAATGC 2 cut(s) 1708, 3010
Bso31I GGTCTC 3 cut(s) 1407, 1869, 1902
BsoBI CYCGRG 3 cut(s) 302, 2130, 3280
Bsp1286I GDGCHC 7 cut(s) 477, 487, 1902, 2044, 3145, 3249, 3614
Bsp1720I GCTNAGC 1 cut(s) 486
Bsp19I CCATGG 1 cut(s) 945
Bsp68I TCGCGA 1 cut(s) 1014
BspACI CCGC 9 cut(s) 18, 95, 97, 181, 224, 450, 453, 867, 2988
BspCNI CTCAG 8 cut(s) 499, 1585, 2226, 2497, 2605, 2737, 2804, 3370
BspDI ATCGAT 1 cut(s) 195
BspFNI CGCG 4 cut(s) 97, 224, 1014, 1176
BspHI TCATGA 1 cut(s) 240
BspLI GGNNCC 7 cut(s) 319, 624, 943, 967, 2741, 3601, 3799
BspMAI CTGCAG 3 cut(s) 79, 2032, 2290
BspPI GGATC 7 cut(s) 428, 729, 828, 2544, 2582, 2774, 2854
BspT107I GGYRCC 3 cut(s) 622, 2739, 3599
BspTI CTTAAG 2 cut(s) 1135, 2744
BspTNI GGTCTC 3 cut(s) 1407, 1869, 1902
BsrBI CCGCTC 2 cut(s) 20, 869
BsrFI RCCGGY 2 cut(s) 320, 1783
BssAI RCCGGY 2 cut(s) 320, 1783
BssSI CACGAG 2 cut(s) 800, 824
BssT1I CCWWGG 6 cut(s) 420, 945, 2223, 3108, 3652, 3868
Bst2BI CACGAG 2 cut(s) 800, 824
Bst2UI CCWGG 7 cut(s) 358, 504, 1686, 1739, 1913, 2844, 3558
Bst4CI ACNGT 4 cut(s) 2255, 2406, 2543, 3132
Bst6I CTCTTC 7 cut(s) 65, 342, 462, 786, 1375, 2905, 3444
BstAFI CTTAAG 2 cut(s) 1135, 2744
BstAPI GCANNNNNTGC 1 cut(s) 3677
BstBAI YACGTR 2 cut(s) 2835, 3491
BstC8I GCNNGC 7 cut(s) 1012, 1425, 1785, 1838, 1974, 2621, 3484
BstDSI CCRYGG 3 cut(s) 95, 445, 945
BstFNI CGCG 4 cut(s) 97, 224, 1014, 1176
BstHHI GCGC 2 cut(s) 229, 1176
BstMCI CGRYCG 1 cut(s) 268
BstNI CCWGG 7 cut(s) 358, 504, 1686, 1739, 1913, 2844, 3558
BstNSI RCATGY 2 cut(s) 3395, 3402
BstPAI GACNNNNGTC 1 cut(s) 1861
BstSFI CTRYAG 5 cut(s) 75, 1302, 2028, 2286, 2982
BstSLI GKGCMC 2 cut(s) 2044, 3614
BstUI CGCG 4 cut(s) 97, 224, 1014, 1176
BstV1I GCAGC 6 cut(s) 373, 782, 1087, 1285, 2053, 2272
BstV2I GAAGAC 1 cut(s) 1792
BstX2I RGATCY 3 cut(s) 820, 2714, 2779
BstXI CCANNNNNNTGG 1 cut(s) 1334
BstYI RGATCY 3 cut(s) 820, 2714, 2779
Bsu15I ATCGAT 1 cut(s) 195
Bsu36I CCTNAGG 1 cut(s) 2592
BsuTUI ATCGAT 1 cut(s) 195
BtgI CCRYGG 3 cut(s) 95, 445, 945
BtgZI GCGATG 2 cut(s) 424, 1029
BtrI CACGTC 1 cut(s) 2424
BtsI GCAGTG 3 cut(s) 286, 1259, 2025
BtsIMutI CAGTG 8 cut(s) 286, 487, 1085, 1259, 2025, 2055, 2981, 3202
BtuMI TCGCGA 1 cut(s) 1014
Cac8I GCNNGC 7 cut(s) 1012, 1425, 1785, 1838, 1974, 2621, 3484
CciI TCATGA 1 cut(s) 240
CfoI GCGC 2 cut(s) 229, 1176
Cfr10I RCCGGY 2 cut(s) 320, 1783
Cfr13I GGNCC 9 cut(s) 506, 966, 1129, 1662, 1682, 2914, 2971, 3370, 3865
Cfr42I CCGCGG 1 cut(s) 98
ClaI ATCGAT 1 cut(s) 195
DraI TTTAAA 2 cut(s) 748, 2277
DraIII CACNNNGTG 1 cut(s) 1192
Eam1104I CTCTTC 7 cut(s) 65, 342, 462, 786, 1375, 2905, 3444
EarI CTCTTC 7 cut(s) 65, 342, 462, 786, 1375, 2905, 3444
Eco130I CCWWGG 6 cut(s) 420, 945, 2223, 3108, 3652, 3868
Eco147I AGGCCT 1 cut(s) 806
Eco24I GRGCYC 1 cut(s) 1902
Eco31I GGTCTC 3 cut(s) 1407, 1869, 1902
Eco47I GGWCC 4 cut(s) 966, 1129, 2914, 3865
Eco57I CTGAAG 5 cut(s) 767, 1214, 1589, 1955, 3567
Eco72I CACGTG 1 cut(s) 2835
Eco81I CCTNAGG 1 cut(s) 2592
Eco88I CYCGRG 3 cut(s) 302, 2130, 3280
EcoO109I RGGNCCY 1 cut(s) 1129
EcoRI GAATTC 2 cut(s) 1579, 2151
EcoRII CCWGG 7 cut(s) 356, 502, 1684, 1737, 1911, 2842, 3556
EcoT14I CCWWGG 6 cut(s) 420, 945, 2223, 3108, 3652, 3868
EcoT22I ATGCAT 3 cut(s) 562, 2212, 3682
EcoT38I GRGCYC 1 cut(s) 1902
ErhI CCWWGG 6 cut(s) 420, 945, 2223, 3108, 3652, 3868
Esp3I CGTCTC 3 cut(s) 259, 516, 3179
FalI AAGNNNNNCTT 6 cut(s) 44, 76, 2171, 2203, 2637, 2669
FaqI GGGAC 5 cut(s) 293, 1576, 1870, 2610, 3141
FauI CCCGC 1 cut(s) 102
FauNDI CATATG 2 cut(s) 1407, 2371
FblI GTMKAC 1 cut(s) 3807
FriOI GRGCYC 1 cut(s) 1902
FspBI CTAG 5 cut(s) 8, 645, 1070, 2511, 3335
GlaI GCGC 2 cut(s) 228, 1175
GsaI CCCAGC 1 cut(s) 1791
GsuI CTGGAG 3 cut(s) 463, 3103, 3837
HapII CCGG 6 cut(s) 143, 315, 321, 619, 1784, 1902
HhaI GCGC 2 cut(s) 229, 1176
Hin6I GCGC 2 cut(s) 227, 1174
HinP1I GCGC 2 cut(s) 227, 1174
HincII GTYRAC 2 cut(s) 3115, 3808
HindII GTYRAC 2 cut(s) 3115, 3808
HindIII AAGCTT 3 cut(s) 707, 2413, 3896
HpaI GTTAAC 1 cut(s) 3115
HpaII CCGG 6 cut(s) 143, 315, 321, 619, 1784, 1902
HphI GGTGA 4 cut(s) 1220, 1563, 2249, 3617
Hpy166II GTNNAC 6 cut(s) 757, 1102, 2042, 2553, 3115, 3808
Hpy8I GTNNAC 6 cut(s) 757, 1102, 2042, 2553, 3115, 3808
Hpy99I CGWCG 1 cut(s) 3809
HpyCH4III ACNGT 4 cut(s) 2255, 2406, 2543, 3132
HpyCH4IV ACGT 8 cut(s) 753, 2293, 2344, 2423, 2834, 3490, 3804, 3922
HpySE526I ACGT 8 cut(s) 753, 2293, 2344, 2423, 2834, 3490, 3804, 3922
HspAI GCGC 2 cut(s) 227, 1174
KpnI GGTACC 2 cut(s) 2743, 3603
KroI GCCGGC 1 cut(s) 1783
KroNI GCCGGC 1 cut(s) 1785
KspAI GTTAAC 1 cut(s) 3115
KspI CCGCGG 1 cut(s) 98
LmnI GCTCC 9 cut(s) 146, 350, 472, 547, 941, 1633, 2063, 2321, 3148
Lsp1109I GCAGC 6 cut(s) 373, 782, 1087, 1285, 2053, 2272
MaeI CTAG 5 cut(s) 8, 645, 1070, 2511, 3335
MaeII ACGT 8 cut(s) 753, 2293, 2344, 2423, 2834, 3490, 3804, 3922
MaeIII GTNAC 8 cut(s) 1208, 1348, 1569, 1811, 2255, 2493, 3394, 3623
MbiI CCGCTC 2 cut(s) 20, 869
MfeI CAATTG 2 cut(s) 2889, 2947
MflI RGATCY 3 cut(s) 820, 2714, 2779
MhlI GDGCHC 7 cut(s) 477, 487, 1902, 2044, 3145, 3249, 3614
MlyI GAGTC 5 cut(s) 51, 258, 314, 2903, 3537
MmeI TCCRAC 7 cut(s) 712, 814, 1121, 1181, 1435, 3708, 3825
Mph1103I ATGCAT 3 cut(s) 562, 2212, 3682
MroNI GCCGGC 1 cut(s) 1783
MroXI GAANNNNTTC 2 cut(s) 2095, 3438
MslI CAYNNNNRTG 4 cut(s) 197, 480, 1252, 1332
MspA1I CMGCKG 1 cut(s) 97
MspCI CTTAAG 2 cut(s) 1135, 2744
MspI CCGG 6 cut(s) 143, 315, 321, 619, 1784, 1902
MunI CAATTG 2 cut(s) 2889, 2947
Mva1269I GAATGC 2 cut(s) 1708, 3010
MvaI CCWGG 7 cut(s) 358, 504, 1686, 1739, 1913, 2844, 3558
MvnI CGCG 4 cut(s) 97, 224, 1014, 1176
NaeI GCCGGC 1 cut(s) 1785
NciI CCSGG 3 cut(s) 144, 620, 1902
NcoI CCATGG 1 cut(s) 945
NdeI CATATG 2 cut(s) 1407, 2371
NgoMIV GCCGGC 1 cut(s) 1783
NlaIV GGNNCC 7 cut(s) 319, 624, 943, 967, 2741, 3601, 3799
NmeAIII GCCGAG 1 cut(s) 2111
NmuCI GTSAC 6 cut(s) 1208, 1348, 1569, 2255, 2493, 3623
NruI TCGCGA 1 cut(s) 1014
NsiI ATGCAT 3 cut(s) 562, 2212, 3682
NspI RCATGY 2 cut(s) 3395, 3402
OliI CACNNNNGTG 2 cut(s) 480, 1252
PaeR7I CTCGAG 1 cut(s) 302
PagI TCATGA 1 cut(s) 240
PceI AGGCCT 1 cut(s) 806
PciI ACATGT 1 cut(s) 3391
PcsI WCGNNNNNNNCGW 5 cut(s) 173, 192, 300, 807, 2299
PctI GAATGC 2 cut(s) 1708, 3010
PdiI GCCGGC 1 cut(s) 1785
PdmI GAANNNNTTC 2 cut(s) 2095, 3438
Pfl23II CGTACG 1 cut(s) 219
PflFI GACNNNGTC 1 cut(s) 1567
PfoI TCCNGGA 4 cut(s) 142, 1737, 2842, 3556
Ple19I CGATCG 1 cut(s) 268
PleI GAGTC 5 cut(s) 51, 257, 313, 2902, 3536
PmaCI CACGTG 1 cut(s) 2835
PmlI CACGTG 1 cut(s) 2835
PpsI GAGTC 5 cut(s) 51, 257, 313, 2902, 3536
Ppu21I YACGTR 2 cut(s) 2835, 3491
PpuMI RGGWCCY 1 cut(s) 1129
PscI ACATGT 1 cut(s) 3391
PshAI GACNNNNGTC 1 cut(s) 1861
PshBI ATTAAT 1 cut(s) 924
PsiI TTATAA 1 cut(s) 1713
Psp1406I AACGTT 1 cut(s) 2344
Psp5II RGGWCCY 1 cut(s) 1129
Psp6I CCWGG 7 cut(s) 356, 502, 1684, 1737, 1911, 2842, 3556
PspCI CACGTG 1 cut(s) 2835
PspFI CCCAGC 1 cut(s) 1787
PspGI CCWGG 7 cut(s) 356, 502, 1684, 1737, 1911, 2842, 3556
PspLI CGTACG 1 cut(s) 219
PspN4I GGNNCC 7 cut(s) 319, 624, 943, 967, 2741, 3601, 3799
PspPI GGNCC 9 cut(s) 506, 966, 1129, 1662, 1682, 2914, 2971, 3370, 3865
PspPPI RGGWCCY 1 cut(s) 1129
PspXI VCTCGAGB 1 cut(s) 302
PstI CTGCAG 3 cut(s) 79, 2032, 2290
PsuI RGATCY 3 cut(s) 820, 2714, 2779
PsyI GACNNNGTC 1 cut(s) 1567
PvuI CGATCG 1 cut(s) 268
RruI TCGCGA 1 cut(s) 1014
RseI CAYNNNNRTG 4 cut(s) 197, 480, 1252, 1332
SacII CCGCGG 1 cut(s) 98
SalI GTCGAC 1 cut(s) 3806
Sau96I GGNCC 9 cut(s) 506, 966, 1129, 1662, 1682, 2914, 2971, 3370, 3865
ScaI AGTACT 3 cut(s) 636, 1618, 3286
SchI GAGTC 5 cut(s) 51, 258, 314, 2903, 3537
SduI GDGCHC 7 cut(s) 477, 487, 1902, 2044, 3145, 3249, 3614
SfcI CTRYAG 5 cut(s) 75, 1302, 2028, 2286, 2982
Sfr274I CTCGAG 1 cut(s) 302
Sfr303I CCGCGG 1 cut(s) 98
SgrBI CCGCGG 1 cut(s) 98
SinI GGWCC 4 cut(s) 966, 1129, 2914, 3865
SlaI CTCGAG 1 cut(s) 302
SmiMI CAYNNNNRTG 4 cut(s) 197, 480, 1252, 1332
SmlI CTYRAG 7 cut(s) 85, 302, 585, 1135, 1390, 2643, 2744
SmoI CTYRAG 7 cut(s) 85, 302, 585, 1135, 1390, 2643, 2744
SseBI AGGCCT 1 cut(s) 806
SsiI CCGC 9 cut(s) 18, 95, 97, 181, 224, 450, 453, 867, 2988
SspI AATATT 2 cut(s) 691, 3453
SspMI CTAG 5 cut(s) 8, 645, 1070, 2511, 3335
StuI AGGCCT 1 cut(s) 806
StyI CCWWGG 6 cut(s) 420, 945, 2223, 3108, 3652, 3868
TaaI ACNGT 4 cut(s) 2255, 2406, 2543, 3132
TaiI ACGT 8 cut(s) 756, 2296, 2347, 2426, 2837, 3493, 3807, 3925
TaqII GACCGA 1 cut(s) 446
TatI WGTACW 6 cut(s) 634, 673, 1616, 1930, 3284, 3856
TauI GCSGC 6 cut(s) 100, 227, 453, 456, 869, 2990
TscAI CASTG 8 cut(s) 293, 487, 1092, 1259, 2032, 2062, 2981, 3202
TseFI GTSAC 6 cut(s) 1208, 1348, 1569, 2255, 2493, 3623
TseI GCWGC 6 cut(s) 361, 795, 1075, 1298, 2066, 2285
Tsp45I GTSAC 6 cut(s) 1208, 1348, 1569, 2255, 2493, 3623
TspGWI ACGGA 2 cut(s) 584, 3166
TspRI CASTG 8 cut(s) 293, 487, 1092, 1259, 2032, 2062, 2981, 3202
Tth111I GACNNNGTC 1 cut(s) 1567
Vha464I CTTAAG 2 cut(s) 1135, 2744
VneI GTGCAC 1 cut(s) 2040
VpaK11BI GGWCC 4 cut(s) 966, 1129, 2914, 3865
VspI ATTAAT 1 cut(s) 924
XceI RCATGY 2 cut(s) 3395, 3402
XcmI CCANNNNNNNNNTGG 2 cut(s) 976, 1745
XhoI CTCGAG 1 cut(s) 302
XmiI GTMKAC 1 cut(s) 3807
XmnI GAANNNNTTC 2 cut(s) 2095, 3438
XspI CTAG 5 cut(s) 8, 645, 1070, 2511, 3335
ZrmI AGTACT 3 cut(s) 636, 1618, 3286
Zsp2I ATGCAT 3 cut(s) 562, 2212, 3682
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.