Rroxscaffold_3G00243840

Fanconi anemia group J protein homolog

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Forward (+)
36297266 .. 36307555
10290 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00243840.1

Sequence Viewer

Length: 3804 bp
ATGGCGTGTGCAACTCCGGGAGCAAACCCTAAAAGCTCATCGAAAAGCTCGTACCGCATCGGAGGCATCGATGTGGAGTTCCCGTACCAGCCGTACGCGGCGCAGATGGCGTTCATGAGCAGAGTCGTCTCCACTCTCGATCGAGCTGTCAGGGACGACCACTGCCACGCCTTGCTCGAGTCTCCCACCGGAACCGGCAAATCCCTCTCTCTTCTCTGCTCCATCCTCGCCTGGCAGCAGAGCTTCAAGGCCAAGAATATGTACGCCAATCTCTCCCATTCCAAGCCCAACCCCAAGGCCATGACCGATCCCATCGCCCACGGCGGCGGCTTTGTTCCAGAAGAGGAGCACTCCAGTGCTCAGCCATCGGAAAAGCCAGGGCCGTCTCAATCTGAAAATCGGAAGAAAAAGGCAGCTCCTACCATATACTATGCATCGAGGACACATTCACAACTTTCTCAAGTCATCCGTGAATATCGGAAAACTTCCTATCGGGTGCCTATGGCAGTGCTGGCCTCTAGGAAGCATTACTGCACAAATGCACAAGTACATGGGAGAGAGAATATTGACGAAGAATGTAAGCTTCTTTTGAAGGATCGAGTGGTTGGATGCGTAGAATTTAAAAATGTACACAAAGTCAAAGGACATCCATCTCTTCAGAAAGGAGGCTGCCACGAGGCCTACGATATTGAGGATCTCGTGAAAGTTGGAAAAGTTGTCAAAGGTTGTTCATATTATGCCGCTCGTTCTATGTCAGACGATGCAGAACTGGTTTTTTGTCCATATAACTACATCATTAATCCAGTCATTAGGGGAGCCATGGAAGTAGATATTCAGGGGTCCATTGTAGTTCTGGATGAAGCCCACAATATAGAGGATGTTGCTCGCGATGCTGGTAGTGTAGATATTGATGAAGAAGTTTTGAACAAATTGCAGATGGAACTAGAGCAGCTTTGCCCACTGGATGTTTTGGTTTACCAACCTCTATATGAAATGATACAGGACCTCTTAAGTTGGATTGAGCGAAGGAAAGATAAGTTAGAAAAGCGTGAATTTCAGCACTTTGTGTCTTGTTGGACTGGTGACAAGGCTTTGAGAGAGCTTCAGGAAGCTAATATATCACAGCAGTGCTTCCCAGTCTTACTTGAATGTGCCACAAAGGCAATCAAAGCTGCTACAGATAAAGAATCAGAGGTAGCCCATTTAAGTGGCATGGCTGTTGTGACATTGGAAGGATTGTTCTCTTCGCTTACTTACTTCTTCTCAAGAAATGGGTCTCATATGGTCGATTATCAGCTTGCTTTACAGAGATATGTTAAAAGAGACGTTGGAACTTTTGGTGATTGGACACATACATTCAGTTTGTGGTGCTTGAATCCTGCTGTTGTGTTTCAAGATATTGCCAATCTTTCCTTGTCAGTCATTTTAACATCGGGGACTTTGTCACCAATGAATTCCTTTTCATCTGAGCTTGGCCTTCAGTTTGGAAGTACTCTGGAAGCTCCCCATGTAATTGATGTTGAATCACAGGTTTGGCCCGCTATTATTTCTACTGGACCAGGTAATGTGCCATTGAATGCAAGTTATAAGACAGCAGATGAATATGCCTTCCAGGATGCACTTGGAAAATCCTTAGAGGAAATTTTCAAAAGTGTGCCGGGTGGGTGTCTTGTGTTCTTCCCAAGTTACAAGCTAATGGGGAAGTTATGCAAGCGTTGGCGTGAAACAGGACAATGGTCTCTGCTAAACGAAAGAAAGGCCCTTTTTATTGAGCCCGGTGGAGACCAGGAGGAATTTGAGTTTGTACTGAAGGGTTATTATGATTCAATTCGTCGGGGCAGTAAGCCTGCTTTTGGGAGAAATAAAGGTGCTAACAAGAAATTAAGACAAAGTAGCTTCACTGCAGTCCAGTGTGCACAAAAGAATAACACTGATGGAGCTGCTTTACTGGCTGTGTGCCGAGGAAAGGTTTCAGAAGGAATTGACTTCACAGATGACAATGCTCGGGCTGTGATAATTGTGGGAATTCCATTTCCCAACATGAATGACATTAAGATTTCCTTAAAGAAGAAATACAATGATGCATATAAGTCATCCAAGGGCTTTCTGAGTGGAAATGAATGGTACTGTCACCAAGCCTTCCGAGCTTTAAACCAAGCTGCAGGACGTTGTATTCGACATAGATTTGATTATGGAGCTGTCATCTTATTAGATGAACGTTATCAGGTAGGAAGAAATACAGCATATGTGTCAAAGTGGCTAAAGAAATCCATTAGACAGTATGAAAGCTTTGACACGTCAATAGAGGAATTAAAATCCTTTTTCAACAACGTCAAGGAAAGGGTTAGCAAGAATGTGGTCAATATGGCACAGAGTTCTGACACTAGAGAGAAAATCATACTTTCTATGGATCACAGTAAAGGGTTTACAAGACTGAAAGATCAGAATTTGAATAAATCTGATCCTCAGGGACAGACAAAAACTTATGTAGGCAAGCACGATTCTCTACTGACATCTCAAGATGATCTTGATGTATCGTCACGAATGGATGTATATGCTGACAATAGCAAGGATTTTATCAATATCAAATCTACTCCTCAGAAAGATACAAGGTACCTTAAGCCATCTTTGTCCATGTCATTCTCTGATGCAGATCCAGACATTTCAGTTGTCAATGAAACCCCTTGTATGGATGGCATCTTTTCCACATGCAGTCCAGGATCAATTAATAAGGATGAGAAGTGCTGTTCGACTTCAACTACAATTGAGTCCTCTTCTTTCTTTTTGGACCAATTCTCATTCCAATCGACATCCTTAATCAATTGCAGCAAGGCTTCTCCAAAGGGCCAGTGTTCTGTAGCCGCTACTCCTGAAAAGAATGCAACTTTGAACTCTTACAGCTCAATGACAGAAACAGAATCATCTTTGAATTTGAGTGTTAATTCTCATATCCAGAAAAGGAGAAAGTCCATGTATCAATCCTTGGTTAACTCCAGTCAGGGACAGTCTGGTGATGCTCCTGATTCTGAAACTCCTGATTGTCCTGGTTCTGTAAAAGAGACAATGACCAGTAGAGATGCCATTCGCAAAATTGAATTTAGTGAATCTAATTATTCAGAGCACTACTGTAAGTCCATAGTTCATCATCTTCCCCCGAGTAGTTGTGGCACTTCTTCTGTGTCAGTTGGTTCTGTCATGGACAAGAGACTAGAAATCTGTTGCTCACTCTGCAAAAGCCCATTGGGCCTTCCTGAGAATAATCTACATGTTACATGCTCAATAACTTCATCATCGAAACTTTACTTGGAATCTCTTCATAATGAAATATTGAAGTCTCAAACTGGGAATACATCAGCAGGCATACGTGTTCTCATAACTGACATTTCATCAGTTGATTATCGAGTCTGCCATGAAATTTCTGAAGGCACTCCTGGACAGGGTGTATGGTGTGAAAAAGATGGGTTTGTTTTTGGTACCATCTTGTGCCCCTTTTGCCGTCACCACAAGAGTGGCCATGATAATTTCCTTGGCGTACAGGTCATGGCAACTAATGCATCAAATGTTCATTTACTCAACAAGATCATGTTTTACTTAGATCAGTTGGAAATTACAAATTTTGAGGCATATTCTGACAAGGCTACAAAAGACAAAGATTTCTTGCCTGTTAATGGTTCCAACGTCGACAAAGTTGCCATTCTCAATCCCTTTGATAAATTCTCGTACTCTCCAGTACAGCAGGACCAAGGAGGATGGAGGACTACAAAATCAAAGCTTAAACTACCCAAAAGGCCCTCACGTTCCTGA

Protein Analysis

1267

Amino Acids

140.95

Weight (kDa)

7.45

Isoelectric Point (pI)

45.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD_2 PF06733 144 - 307 3e-44 DEAD_2
Helicase_C_2 PF13307 546 - 756 1.4e-51 Helicase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1587
Acc65I GGTACC 2 cut(s) 2613, 3473
AccB1I GGYRCC 3 cut(s) 496, 2613, 3473
AccBSI CCGCTC 1 cut(s) 743
AccI GTMKAC 1 cut(s) 3681
AccII CGCG 2 cut(s) 98, 888
AciI CCGC 7 cut(s) 55, 98, 324, 327, 741, 1539, 2862
AclI AACGTT 1 cut(s) 2218
AclWI GGATC 7 cut(s) 302, 603, 702, 2418, 2456, 2648, 2728
AcoI YGGCCR 1 cut(s) 3511
AcuI CTGAAG 5 cut(s) 641, 1088, 1463, 1829, 3441
AdeI CACNNNGTG 1 cut(s) 1066
AfiI CCNNNNNNNGG 5 cut(s) 1853, 1966, 2689, 3437, 3668
AflII CTTAAG 2 cut(s) 1009, 2618
AflIII ACRYGT 3 cut(s) 2295, 3265, 3364
AjiI CACGTC 1 cut(s) 2298
AjnI CCWGG 8 cut(s) 230, 376, 1558, 1611, 1785, 2716, 3043, 3430
AjuI GAANNNNNNNTTGG 2 cut(s) 3287, 3319
AleI CACNNNNGTG 3 cut(s) 354, 1126, 3507
AloI GAACNNNNNNTCC 2 cut(s) 1223, 1255
Alw21I GWGCWC 4 cut(s) 351, 361, 1918, 3123
Alw44I GTGCAC 1 cut(s) 1914
AlwI GGATC 7 cut(s) 302, 603, 702, 2418, 2456, 2648, 2728
Ama87I CYCGRG 3 cut(s) 176, 2004, 3154
ApaLI GTGCAC 1 cut(s) 1914
ApeKI GCWGC 8 cut(s) 235, 413, 669, 949, 1172, 1940, 2159, 2826
ArsI GACNNNNNNTTYG 2 cut(s) 2157, 2189
AseI ATTAAT 2 cut(s) 798, 2727
Asp700I GAANNNNTTC 2 cut(s) 1969, 3312
Asp718I GGTACC 2 cut(s) 2613, 3473
AspLEI GCGC 1 cut(s) 103
AsuC2I CCSGG 3 cut(s) 18, 1659, 1776
AsuHPI GGTGA 6 cut(s) 1094, 1352, 1437, 2123, 3023, 3491
AvaI CYCGRG 3 cut(s) 176, 2004, 3154
AvaII GGWCC 5 cut(s) 840, 1003, 1556, 2788, 3739
AxyI CCTNAGG 1 cut(s) 2466
BaeGI GKGCMC 2 cut(s) 1918, 3488
BalI TGGCCA 1 cut(s) 3513
BanI GGYRCC 3 cut(s) 496, 2613, 3473
BanII GRGCYC 1 cut(s) 1776
BauI CACGAG 2 cut(s) 674, 698
Bbv12I GWGCWC 4 cut(s) 351, 361, 1918, 3123
BbvI GCAGC 8 cut(s) 247, 425, 656, 961, 1159, 1927, 2146, 2838
BceAI ACGGC 4 cut(s) 76, 337, 367, 3480
BcgI CGANNNNNNTGC 2 cut(s) 3671, 3705
BciT130I CCWGG 8 cut(s) 232, 378, 1560, 1613, 1787, 2718, 3045, 3432
BcnI CCSGG 3 cut(s) 18, 1659, 1776
BfaI CTAG 4 cut(s) 519, 944, 2385, 3209
BfmI CTRYAG 4 cut(s) 1176, 1902, 2160, 2856
BfrI CTTAAG 2 cut(s) 1009, 2618
BglI GCCNNNNNGGC 2 cut(s) 1160, 3243
BlpI GCTNAGC 1 cut(s) 360
BmcAI AGTACT 1 cut(s) 1492
Bme18I GGWCC 5 cut(s) 840, 1003, 1556, 2788, 3739
BmeT110I CYCGRG 3 cut(s) 176, 2004, 3154
BmgBI CACGTC 1 cut(s) 2298
BmiI GGNNCC 7 cut(s) 193, 498, 817, 841, 2615, 3475, 3673
BmrI ACTGGG 2 cut(s) 1130, 3351
BmuI ACTGGG 2 cut(s) 1130, 3351
BoxI GACNNNNGTC 1 cut(s) 1735
BplI GAGNNNNNCTC 2 cut(s) 335, 367
BpmI CTGGAG 3 cut(s) 337, 2977, 3711
Bpu1102I GCTNAGC 1 cut(s) 360
BpuEI CTTGAG 3 cut(s) 444, 1249, 2502
BpuMI CCSGG 3 cut(s) 18, 1659, 1776
Bsa29I ATCGAT 1 cut(s) 69
BsaAI YACGTR 1 cut(s) 3365
BsaBI GATNNNNATC 1 cut(s) 2652
BsaI GGTCTC 3 cut(s) 1281, 1743, 1776
BsaJI CCNNGG 9 cut(s) 294, 319, 377, 819, 1960, 2097, 2982, 3526, 3742
BsaWI WCCGGW 1 cut(s) 188
BsaXI ACNNNNNCTCC 2 cut(s) 68, 98
Bsc4I CCNNNNNNNGG 5 cut(s) 1853, 1966, 2689, 3437, 3668
Bse118I RCCGGY 1 cut(s) 194
Bse21I CCTNAGG 1 cut(s) 2466
Bse8I GATNNNNATC 1 cut(s) 2652
BseBI CCWGG 8 cut(s) 232, 378, 1560, 1613, 1787, 2718, 3045, 3432
BseCI ATCGAT 1 cut(s) 69
BseDI CCNNGG 9 cut(s) 294, 319, 377, 819, 1960, 2097, 2982, 3526, 3742
BseJI GATNNNNATC 1 cut(s) 2652
BseLI CCNNNNNNNGG 5 cut(s) 1853, 1966, 2689, 3437, 3668
BseMII CTCAG 6 cut(s) 374, 1458, 2099, 2480, 2612, 3243
BseRI GAGGAG 2 cut(s) 359, 2586
BseSI GKGCMC 2 cut(s) 1918, 3488
BseXI GCAGC 8 cut(s) 247, 425, 656, 961, 1159, 1927, 2146, 2838
BsgI GTGCAG 1 cut(s) 517
Bsh1236I CGCG 2 cut(s) 98, 888
Bsh1285I CGRYCG 1 cut(s) 142
BshNI GGYRCC 3 cut(s) 496, 2613, 3473
BshVI ATCGAT 1 cut(s) 69
BsiEI CGRYCG 1 cut(s) 142
BsiHKAI GWGCWC 4 cut(s) 351, 361, 1918, 3123
BsiHKCI CYCGRG 3 cut(s) 176, 2004, 3154
BsiSI CCGG 5 cut(s) 17, 189, 195, 1658, 1776
BsiWI CGTACG 1 cut(s) 93
BslFI GGGAC 4 cut(s) 167, 1450, 2484, 3015
BslI CCNNNNNNNGG 5 cut(s) 1853, 1966, 2689, 3437, 3668
BsmBI CGTCTC 3 cut(s) 133, 390, 1317
BsmFI GGGAC 4 cut(s) 167, 1450, 2484, 3015
BsmI GAATGC 2 cut(s) 1582, 2884
Bso31I GGTCTC 3 cut(s) 1281, 1743, 1776
BsoBI CYCGRG 3 cut(s) 176, 2004, 3154
Bsp1286I GDGCHC 6 cut(s) 351, 361, 1776, 1918, 3123, 3488
Bsp1407I TGTACA 1 cut(s) 628
Bsp1720I GCTNAGC 1 cut(s) 360
Bsp19I CCATGG 1 cut(s) 819
Bsp68I TCGCGA 1 cut(s) 888
BspACI CCGC 7 cut(s) 55, 98, 324, 327, 741, 1539, 2862
BspCNI CTCAG 6 cut(s) 373, 1459, 2100, 2479, 2611, 3244
BspDI ATCGAT 1 cut(s) 69
BspFNI CGCG 2 cut(s) 98, 888
BspHI TCATGA 1 cut(s) 114
BspLI GGNNCC 7 cut(s) 193, 498, 817, 841, 2615, 3475, 3673
BspMAI CTGCAG 2 cut(s) 1906, 2164
BspPI GGATC 7 cut(s) 302, 603, 702, 2418, 2456, 2648, 2728
BspT107I GGYRCC 3 cut(s) 496, 2613, 3473
BspTI CTTAAG 2 cut(s) 1009, 2618
BspTNI GGTCTC 3 cut(s) 1281, 1743, 1776
BsrBI CCGCTC 1 cut(s) 743
BsrFI RCCGGY 1 cut(s) 194
BsrGI TGTACA 1 cut(s) 628
BssAI RCCGGY 1 cut(s) 194
BssECI CCNNGG 9 cut(s) 294, 319, 377, 819, 1960, 2097, 2982, 3526, 3742
BssSI CACGAG 2 cut(s) 674, 698
BssT1I CCWWGG 6 cut(s) 294, 819, 2097, 2982, 3526, 3742
Bst2BI CACGAG 2 cut(s) 674, 698
Bst2UI CCWGG 8 cut(s) 232, 378, 1560, 1613, 1787, 2718, 3045, 3432
Bst4CI ACNGT 5 cut(s) 2129, 2280, 2417, 3006, 3128
Bst6I CTCTTC 6 cut(s) 216, 336, 660, 1249, 2779, 3318
BstAFI CTTAAG 2 cut(s) 1009, 2618
BstAPI GCANNNNNTGC 1 cut(s) 3551
BstAUI TGTACA 1 cut(s) 628
BstBAI YACGTR 1 cut(s) 3365
BstC8I GCNNGC 8 cut(s) 513, 886, 1299, 1539, 1712, 1848, 2495, 3358
BstDEI CTNAG 8 cut(s) 360, 1467, 1633, 2108, 2466, 2598, 3252, 3592
BstDSI CCRYGG 2 cut(s) 319, 819
BstFNI CGCG 2 cut(s) 98, 888
BstHHI GCGC 1 cut(s) 103
BstMCI CGRYCG 1 cut(s) 142
BstNI CCWGG 8 cut(s) 232, 378, 1560, 1613, 1787, 2718, 3045, 3432
BstNSI RCATGY 3 cut(s) 2712, 3269, 3276
BstPAI GACNNNNGTC 1 cut(s) 1735
BstSFI CTRYAG 4 cut(s) 1176, 1902, 2160, 2856
BstSLI GKGCMC 2 cut(s) 1918, 3488
BstUI CGCG 2 cut(s) 98, 888
BstV1I GCAGC 8 cut(s) 247, 425, 656, 961, 1159, 1927, 2146, 2838
BstX2I RGATCY 2 cut(s) 694, 2653
BstXI CCANNNNNNTGG 2 cut(s) 1208, 3509
BstYI RGATCY 2 cut(s) 694, 2653
Bsu15I ATCGAT 1 cut(s) 69
Bsu36I CCTNAGG 1 cut(s) 2466
BsuTUI ATCGAT 1 cut(s) 69
BtgI CCRYGG 2 cut(s) 319, 819
BtgZI GCGATG 2 cut(s) 298, 903
BtrI CACGTC 1 cut(s) 2298
BtsI GCAGTG 4 cut(s) 160, 513, 1133, 1899
BtsIMutI CAGTG 9 cut(s) 160, 361, 513, 959, 1133, 1899, 1916, 1929, 2855
BtuMI TCGCGA 1 cut(s) 888
Cac8I GCNNGC 8 cut(s) 513, 886, 1299, 1539, 1712, 1848, 2495, 3358
CciI TCATGA 1 cut(s) 114
CfoI GCGC 1 cut(s) 103
Cfr10I RCCGGY 1 cut(s) 194
ClaI ATCGAT 1 cut(s) 69
CsiI ACCWGGT 1 cut(s) 1558
DdeI CTNAG 8 cut(s) 360, 1467, 1633, 2108, 2466, 2598, 3252, 3592
DraI TTTAAA 2 cut(s) 622, 2151
DraIII CACNNNGTG 1 cut(s) 1066
EaeI YGGCCR 1 cut(s) 3511
Eam1104I CTCTTC 6 cut(s) 216, 336, 660, 1249, 2779, 3318
EarI CTCTTC 6 cut(s) 216, 336, 660, 1249, 2779, 3318
Eco130I CCWWGG 6 cut(s) 294, 819, 2097, 2982, 3526, 3742
Eco147I AGGCCT 1 cut(s) 680
Eco24I GRGCYC 1 cut(s) 1776
Eco31I GGTCTC 3 cut(s) 1281, 1743, 1776
Eco47I GGWCC 5 cut(s) 840, 1003, 1556, 2788, 3739
Eco57I CTGAAG 5 cut(s) 641, 1088, 1463, 1829, 3441
Eco81I CCTNAGG 1 cut(s) 2466
Eco88I CYCGRG 3 cut(s) 176, 2004, 3154
EcoO109I RGGNCCY 3 cut(s) 1003, 1759, 3789
EcoRI GAATTC 2 cut(s) 1453, 2025
EcoRII CCWGG 8 cut(s) 230, 376, 1558, 1611, 1785, 2716, 3043, 3430
EcoT14I CCWWGG 6 cut(s) 294, 819, 2097, 2982, 3526, 3742
EcoT22I ATGCAT 3 cut(s) 436, 2086, 3556
EcoT38I GRGCYC 1 cut(s) 1776
ErhI CCWWGG 6 cut(s) 294, 819, 2097, 2982, 3526, 3742
Esp3I CGTCTC 3 cut(s) 133, 390, 1317
FalI AAGNNNNNCTT 4 cut(s) 2045, 2077, 2511, 2543
FaqI GGGAC 4 cut(s) 167, 1450, 2484, 3015
FauI CCCGC 1 cut(s) 1546
FauNDI CATATG 2 cut(s) 1281, 2245
FblI GTMKAC 1 cut(s) 3681
FriOI GRGCYC 1 cut(s) 1776
FspBI CTAG 4 cut(s) 519, 944, 2385, 3209
GlaI GCGC 1 cut(s) 102
GsuI CTGGAG 3 cut(s) 337, 2977, 3711
HapII CCGG 5 cut(s) 17, 189, 195, 1658, 1776
HhaI GCGC 1 cut(s) 103
Hin6I GCGC 1 cut(s) 101
HinP1I GCGC 1 cut(s) 101
HincII GTYRAC 2 cut(s) 2989, 3682
HindII GTYRAC 2 cut(s) 2989, 3682
HindIII AAGCTT 3 cut(s) 581, 2287, 3770
HpaI GTTAAC 1 cut(s) 2989
HpaII CCGG 5 cut(s) 17, 189, 195, 1658, 1776
HphI GGTGA 6 cut(s) 1094, 1352, 1437, 2123, 3023, 3491
Hpy166II GTNNAC 6 cut(s) 631, 976, 1916, 2427, 2989, 3682
Hpy8I GTNNAC 6 cut(s) 631, 976, 1916, 2427, 2989, 3682
Hpy99I CGWCG 2 cut(s) 1836, 3683
HpyCH4III ACNGT 5 cut(s) 2129, 2280, 2417, 3006, 3128
HpyCH4IV ACGT 8 cut(s) 1326, 2167, 2218, 2297, 2331, 3364, 3678, 3796
HpyF3I CTNAG 8 cut(s) 360, 1467, 1633, 2108, 2466, 2598, 3252, 3592
HpySE526I ACGT 8 cut(s) 1326, 2167, 2218, 2297, 2331, 3364, 3678, 3796
HspAI GCGC 1 cut(s) 101
KpnI GGTACC 2 cut(s) 2617, 3477
KspAI GTTAAC 1 cut(s) 2989
LmnI GCTCC 9 cut(s) 20, 224, 346, 421, 815, 1507, 1937, 2195, 3022
Lsp1109I GCAGC 8 cut(s) 247, 425, 656, 961, 1159, 1927, 2146, 2838
MabI ACCWGGT 1 cut(s) 1558
MaeI CTAG 4 cut(s) 519, 944, 2385, 3209
MaeII ACGT 8 cut(s) 1326, 2167, 2218, 2297, 2331, 3364, 3678, 3796
MaeIII GTNAC 8 cut(s) 1082, 1222, 1443, 1685, 2129, 2538, 3268, 3497
MbiI CCGCTC 1 cut(s) 743
MfeI CAATTG 2 cut(s) 2763, 2821
MflI RGATCY 2 cut(s) 694, 2653
MhlI GDGCHC 6 cut(s) 351, 361, 1776, 1918, 3123, 3488
MlsI TGGCCA 1 cut(s) 3513
MluNI TGGCCA 1 cut(s) 3513
MlyI GAGTC 4 cut(s) 132, 188, 2777, 3411
MmeI TCCRAC 7 cut(s) 586, 688, 995, 1055, 1309, 3582, 3699
Mox20I TGGCCA 1 cut(s) 3513
Mph1103I ATGCAT 3 cut(s) 436, 2086, 3556
MroXI GAANNNNTTC 2 cut(s) 1969, 3312
MscI TGGCCA 1 cut(s) 3513
MslI CAYNNNNRTG 5 cut(s) 71, 354, 1126, 1206, 3507
Msp20I TGGCCA 1 cut(s) 3513
MspCI CTTAAG 2 cut(s) 1009, 2618
MspI CCGG 5 cut(s) 17, 189, 195, 1658, 1776
MunI CAATTG 2 cut(s) 2763, 2821
Mva1269I GAATGC 2 cut(s) 1582, 2884
MvaI CCWGG 8 cut(s) 232, 378, 1560, 1613, 1787, 2718, 3045, 3432
MvnI CGCG 2 cut(s) 98, 888
NciI CCSGG 3 cut(s) 18, 1659, 1776
NcoI CCATGG 1 cut(s) 819
NdeI CATATG 2 cut(s) 1281, 2245
NlaIV GGNNCC 7 cut(s) 193, 498, 817, 841, 2615, 3475, 3673
NmeAIII GCCGAG 1 cut(s) 1985
NmuCI GTSAC 6 cut(s) 1082, 1222, 1443, 2129, 2538, 3497
NruI TCGCGA 1 cut(s) 888
NsiI ATGCAT 3 cut(s) 436, 2086, 3556
NspI RCATGY 3 cut(s) 2712, 3269, 3276
OliI CACNNNNGTG 3 cut(s) 354, 1126, 3507
PaeR7I CTCGAG 1 cut(s) 176
PagI TCATGA 1 cut(s) 114
PceI AGGCCT 1 cut(s) 680
PciI ACATGT 1 cut(s) 3265
PcsI WCGNNNNNNNCGW 5 cut(s) 47, 66, 174, 681, 2173
PctI GAATGC 2 cut(s) 1582, 2884
PdmI GAANNNNTTC 2 cut(s) 1969, 3312
PfeI GAWTC 9 cut(s) 1187, 1375, 1523, 1823, 2501, 2918, 3023, 3104, 3308
Pfl23II CGTACG 1 cut(s) 93
PflFI GACNNNGTC 1 cut(s) 1441
PfoI TCCNGGA 4 cut(s) 16, 1611, 2716, 3430
Ple19I CGATCG 1 cut(s) 142
PleI GAGTC 4 cut(s) 131, 187, 2776, 3410
PpsI GAGTC 4 cut(s) 131, 187, 2776, 3410
Ppu21I YACGTR 1 cut(s) 3365
PpuMI RGGWCCY 1 cut(s) 1003
PscI ACATGT 1 cut(s) 3265
PshAI GACNNNNGTC 1 cut(s) 1735
PshBI ATTAAT 2 cut(s) 798, 2727
PsiI TTATAA 1 cut(s) 1587
Psp1406I AACGTT 1 cut(s) 2218
Psp5II RGGWCCY 1 cut(s) 1003
Psp6I CCWGG 8 cut(s) 230, 376, 1558, 1611, 1785, 2716, 3043, 3430
PspGI CCWGG 8 cut(s) 230, 376, 1558, 1611, 1785, 2716, 3043, 3430
PspLI CGTACG 1 cut(s) 93
PspN4I GGNNCC 7 cut(s) 193, 498, 817, 841, 2615, 3475, 3673
PspPPI RGGWCCY 1 cut(s) 1003
PspXI VCTCGAGB 1 cut(s) 176
PstI CTGCAG 2 cut(s) 1906, 2164
PsuI RGATCY 2 cut(s) 694, 2653
PsyI GACNNNGTC 1 cut(s) 1441
PvuI CGATCG 1 cut(s) 142
RruI TCGCGA 1 cut(s) 888
RseI CAYNNNNRTG 5 cut(s) 71, 354, 1126, 1206, 3507
SalI GTCGAC 1 cut(s) 3680
ScaI AGTACT 1 cut(s) 1492
SchI GAGTC 4 cut(s) 132, 188, 2777, 3411
SduI GDGCHC 6 cut(s) 351, 361, 1776, 1918, 3123, 3488
SexAI ACCWGGT 1 cut(s) 1558
SfcI CTRYAG 4 cut(s) 1176, 1902, 2160, 2856
Sfr274I CTCGAG 1 cut(s) 176
SinI GGWCC 5 cut(s) 840, 1003, 1556, 2788, 3739
SlaI CTCGAG 1 cut(s) 176
SmiMI CAYNNNNRTG 5 cut(s) 71, 354, 1126, 1206, 3507
SmlI CTYRAG 6 cut(s) 176, 459, 1009, 1264, 2517, 2618
SmoI CTYRAG 6 cut(s) 176, 459, 1009, 1264, 2517, 2618
SseBI AGGCCT 1 cut(s) 680
SsiI CCGC 7 cut(s) 55, 98, 324, 327, 741, 1539, 2862
SspI AATATT 2 cut(s) 565, 3327
SspMI CTAG 4 cut(s) 519, 944, 2385, 3209
StuI AGGCCT 1 cut(s) 680
StyI CCWWGG 6 cut(s) 294, 819, 2097, 2982, 3526, 3742
TaaI ACNGT 5 cut(s) 2129, 2280, 2417, 3006, 3128
TaiI ACGT 8 cut(s) 1329, 2170, 2221, 2300, 2334, 3367, 3681, 3799
TaqII GACCGA 1 cut(s) 320
TatI WGTACW 5 cut(s) 547, 628, 1490, 1804, 3730
TauI GCSGC 5 cut(s) 101, 327, 330, 743, 2864
TfiI GAWTC 9 cut(s) 1187, 1375, 1523, 1823, 2501, 2918, 3023, 3104, 3308
TscAI CASTG 9 cut(s) 167, 361, 513, 966, 1133, 1906, 1916, 1936, 2855
TseFI GTSAC 6 cut(s) 1082, 1222, 1443, 2129, 2538, 3497
TseI GCWGC 8 cut(s) 235, 413, 669, 949, 1172, 1940, 2159, 2826
Tsp45I GTSAC 6 cut(s) 1082, 1222, 1443, 2129, 2538, 3497
TspGWI ACGGA 1 cut(s) 458
TspRI CASTG 9 cut(s) 167, 361, 513, 966, 1133, 1906, 1916, 1936, 2855
Tth111I GACNNNGTC 1 cut(s) 1441
Vha464I CTTAAG 2 cut(s) 1009, 2618
VneI GTGCAC 1 cut(s) 1914
VpaK11BI GGWCC 5 cut(s) 840, 1003, 1556, 2788, 3739
VspI ATTAAT 2 cut(s) 798, 2727
XceI RCATGY 3 cut(s) 2712, 3269, 3276
XcmI CCANNNNNNNNNTGG 2 cut(s) 850, 1619
XhoI CTCGAG 1 cut(s) 176
XmiI GTMKAC 1 cut(s) 3681
XmnI GAANNNNTTC 2 cut(s) 1969, 3312
XspI CTAG 4 cut(s) 519, 944, 2385, 3209
ZrmI AGTACT 1 cut(s) 1492
Zsp2I ATGCAT 3 cut(s) 436, 2086, 3556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.