Rw7G024990

Fanconi anemia group J protein homolog

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
31227162 .. 31238220
11059 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G024990.1

Sequence Viewer

Length: 3843 bp
ATGAAAATGGCGTGTGCAACTCCGGGAGCAAACCCTAAAAGCTCATCGAAAAGCTCGTACCGCATCGGAGGCATCGATGTGGAGTTCCCGTACCAGCCGTACGCGGCCCAGATGGCGTTCATGAGCAGAGTCGTCTCCACTCTCGATCGAGCTGTCAGGGACGACCACTGCCACGCCTTGCTCGAGTCTCCCACCGGAACCGGCAAATCCCTCTCTCTTCTCTGCTCCATCCTCGCCTGGCAGCAGAGCTTCAAGGCCAAGAATATGTACGCCAATCTCTCCCATTCCAAGCCCAACCCCAAGGCCATGACCGATCCCATCGCCCACGGCGGCGGCTTTGTTCCCGAAGAGGAGCACTCCAGTGCTCAGCCATCGGAAAAGCCAGGGCCGTCTCAATCTGAAAATCGGAAGAAAAAGGCAGCTCCTACCATATACTATGCATCGAGGACACATTCACAAATTTCTCAAGTCATCCGTGAATATCGGAAAACTTCCTACCGGGTGCCTATGGCAGTGCTGGCTTCTAGGAAGCATTACTGCACAAATGCACAAGTACATGGGAGAGAGAATATTGACGAAGAATGTAAGCTTCTTTTGAAGGATCGAGTGGTTGGATGTGTAGAATTTAAAAACGTACACAAAGTCAAAGGACATCCATCTCTTCAGAAAGGAGGCTGCCATGAGGCCTACGATATTGAGGATCTCGTGAAAGTTGGAAAAGTTGTCAAAGGTTGTTCATATTATGCCGCTCGTTCTATGTCAGACGATGCAGAACTGGTTTTTTGTCCATATAACTACATCATTAATCCAGTCATTAGGGGAGCCATGGAAGTAGATATTCAGGGGTCCATTGTAGTTCTGGATGAAGCCCACAATATAGAGGATGTTGCTCGCGATGCTGGTAGTGTAGATATTGATGAAGAAGTTTTGAACAAATTGCAGATGGAACTAGAGCAGCTTTGCCCACTGGATGTTTTGGTTTACCAACCTCTGTATGAAATGATACAGGACCTCTTAAGTTGGATTGAGCGAAGGAAAGATAAGTTAGAAAAGCGTGAATTTCAGCACTTTGTGTCTTGTTGGACTGGTGACAAGGCTTTGAGAGAGCTTCAGGAAGCTAATATATCACAGCAGTGCTTCCCAGTCTTACTTGAATGTGCCACAAAGGCAATCAAAGCTGCTACAGATAAAGAATCAGAGGTAGCCCATTTAAGTGGCATGGCTGTTGTGACATTGGAAGGATTGTTCTCTTCGCTTACTTACTTCTTCTCAAGAAATGGGTCTCATATGGTCGATTATCAGCTTGCTTTACAGAGATATGTTAAAAGAGATGTTGGAACTTTTGGCGATTGGACACATACATTCAGTTTGTGGTGCTTGAATCCTGCTGTTGTGTTTCAAGATATTGCCAATCTTTCCTTGTCAGTCATTTTAACATCGGGGACTTTGTCACCAATGAATTCCTTTTCATCTGAGCTTGGCCTTCAGTTTGGAAGTACTCTGGAAGCTCCCCATGTAATTGATGTTGAATCACAGGTTTGGCCCGCTATTATTTCTACTGGCCCAGGTAATGTGCCATTGAATGCAAGTTATAAGACAGCAGATGAATATGCCTTCCAGGATGCACTTGGAAAATCCTTAGAGGAAATTTTCAAAAGTGTGCCTGGTGGGTGTCTTGTCTTCTTCCCAAGTTACAAGCTAATGGGGAAGTTATGCAAGCGTTGGCGTGAAACAGGACAATGGTCTCTGCTAAACGAAAGAAAGTCCCTTTTTATTGAGCCCGGTGGAGACCAGGAGGAATTTGAGTTTGTACTGAAGGGTTATTATGATTCAATTCGTGGGGGCAATAAGCCTGCTTTTGGGAGAAATAAAGGTGCTAACAAGAAATTAAGACAAAGTAGCTTCACTGCAGTCAAGTGTGCACAAAAGAATAACACTGATGGAGCTGCTTTACTGGCTGTGTGCCGAGGAAAGGTTTCAGAAGGAATCGACTTCACAGATGACAATGCTCGGGCTGTGATAATTGTGGGAATTCCATTTCCCAACATGAATGACATTAAGATTTCCTTAAAGAAGAAATACAATGATGCATATAAGTCATCCAAGGGCTTTCTGAGTGGAAATGAATGGTACTGTCACCAAGCCTTCCGAGCTTTAAATCAAGCTGCAGGACGTTGTATTCGACATAGGTTTGATTATGGAGCTGTCATCTTATTAGATGAACGTTATCAGGTAGGAAGAAATACAGCATATGTGTCAAAGTGGCTAAAGAAATCCATTAGACAGTATGAAAGCTTTGACACGTCAATAGAGGAATTAAAATCCTTTTTCAACAATGTCAAGGAAAGGGTAAGCAAGAATATGGTCAATGTGTCCCAGAGTTCTGACACTAGAGAGAAAATCATTCTTTCTATGGATCACAGTAAAGGGTTTACAAGACTGAAAGATCAGAATTTGAATAAATCTGATCCTCAGGGACAGACAAAAACTTATGTAGGCAAGCACGATTCTCTACTGACATCTCAAGATGATCTTGATGTATCATCACGAATGGATGTATATGCTGACAATAGCAAGGACTTTATCAATATCAGATCTACTCCTCAGAAAGATACAAGGTACCTTAAGCCATCTTTGTCCATGTCATTCTCTGATGCAGATCCAGACATCTCAGTTGTCAATGAAACCCCTTGTATGGACGGCATCTTTTCCACGTGCAGTCCAGGATCAATTACTAAGGATGAGAAGTGCTGTTCGACTTCGACTACAATTGAGTCCTCTTCTTTCTTTTTGGACCAATTCTCATTCCAATCAACATCCTTAACCAATTGTAGCAAGGCTTCTCCAAAGGGCCAGTGTTCTGTAGCCGCTACTCCTGAAAAGAATGCAACTTTGAACTCTTACAGCTCAATGACAGAAACAGAATCATCTTTGGATTTGAGTGTTAATTCTCATATCCAGAAAAGGAGAAAGTCCATATATAAATCCTTGGTTAACTCCAGTCAGGGACAGTCTGGTGGTGCTCCTGATTCTGAAACTCCTGATTGTCCTGATTCCGTAAAAGAGACGATGACCAGTGGAGATGCCATTCGCAAAATTGAATTTAGTGAATCTAATTATTCAGAGCACTATTGTAAGTCCATAGTTCATCATCTTCCCCCGAGTACTTGTGGCACGTCATCTGTGTCAGTTGGTTCTGTCATGGACAAGAGACTAGAAATCTGTTGCTCACTCTGCAAAAGCCCTTTGGGCCTTCCTGAGAATAATCTACATGTTACATGCTCGATAACTTCATCATCGAAACTTTACTTGGAATCTCTTCATAACGAAATATTGAAATCTCAAACTGGGAATACATCAGCAGGCATACGTGTTCTCATAACTGACATTTCATCAGTTGATTATCGAGTCTGCCATGAAATTTCTGAAGGCACTCCTGGACAGGGTGTATGGTGTGAAAAAGATGGGTTTGTTTTCGGTACCATCTTGTGCCCCTTTTGCCGTCACCACAAGAGTAGCCACGATAATTTCCTTGGCGTACAGGTCATGGCAACTAATGCATCAAATGTTCATTTACTCAACAAGATCATGTTTTACTTAGATCAGTTGGAAATTACAAATTTTGAGGCATCTTCTGACAGGGCTACAAAAGACAAAGATTTCTTGCCTGTTAACTGTTCCAACGTCGACAAAGTTGCCATTCTCAATCCCTTTGATAAATTCTCGTACTCTCCAGTACAGCAGGACCAAGGAGGATGGAGGACTACAAAATCAAAGGAGTGGACATTTTGTACCGAAAATGCGGTTACCGTCCCGAACAGCACCGAAAAAACAGTTCGGTAA

Protein Analysis

1280

Amino Acids

142.33

Weight (kDa)

6.8

Isoelectric Point (pI)

44.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD_2 PF06733 146 - 309 3.4e-44 DEAD_2
Helicase_C_2 PF13307 548 - 758 1.4e-51 Helicase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1593
Acc65I GGTACC 2 cut(s) 2619, 3479
AccB1I GGYRCC 3 cut(s) 502, 2619, 3479
AccBSI CCGCTC 1 cut(s) 749
AccI GTMKAC 1 cut(s) 3687
AccII CGCG 2 cut(s) 104, 894
AciI CCGC 8 cut(s) 61, 104, 330, 333, 747, 1545, 2868, 3803
AclI AACGTT 1 cut(s) 2224
AclWI GGATC 7 cut(s) 308, 609, 708, 2424, 2462, 2654, 2734
AcuI CTGAAG 5 cut(s) 647, 1094, 1469, 1835, 3447
AcvI CACGTG 1 cut(s) 2715
AdeI CACNNNGTG 1 cut(s) 1072
AfiI CCNNNNNNNGG 4 cut(s) 1859, 1972, 2695, 3443
AflII CTTAAG 2 cut(s) 1015, 2624
AflIII ACRYGT 3 cut(s) 2301, 3271, 3370
AjiI CACGTC 2 cut(s) 2304, 3177
AjnI CCWGG 8 cut(s) 236, 382, 1564, 1617, 1663, 1791, 2722, 3436
AjuI GAANNNNNNNTTGG 2 cut(s) 3293, 3325
AleI CACNNNNGTG 2 cut(s) 360, 1132
AloI GAACNNNNNNTCC 2 cut(s) 1229, 1261
Alw21I GWGCWC 5 cut(s) 357, 367, 1924, 3025, 3129
Alw26I GTCTC 8 cut(s) 139, 192, 396, 1287, 1749, 1782, 3059, 3205
Alw44I GTGCAC 1 cut(s) 1920
AlwI GGATC 7 cut(s) 308, 609, 708, 2424, 2462, 2654, 2734
Ama87I CYCGRG 3 cut(s) 182, 2010, 3160
ApaLI GTGCAC 1 cut(s) 1920
ApeKI GCWGC 7 cut(s) 241, 419, 675, 955, 1178, 1946, 2165
ArsI GACNNNNNNTTYG 2 cut(s) 2163, 2195
AseI ATTAAT 1 cut(s) 804
Asp700I GAANNNNTTC 2 cut(s) 1975, 3318
Asp718I GGTACC 2 cut(s) 2619, 3479
AsuC2I CCSGG 3 cut(s) 24, 500, 1782
AsuHPI GGTGA 4 cut(s) 1100, 1443, 2129, 3497
AvaI CYCGRG 3 cut(s) 182, 2010, 3160
AvaII GGWCC 4 cut(s) 846, 1009, 2794, 3745
AxyI CCTNAGG 1 cut(s) 2472
BaeGI GKGCMC 2 cut(s) 1924, 3494
BanI GGYRCC 3 cut(s) 502, 2619, 3479
BanII GRGCYC 1 cut(s) 1782
BarI GAAGNNNNNNTAC 2 cut(s) 2824, 2856
BauI CACGAG 1 cut(s) 704
BbrPI CACGTG 1 cut(s) 2715
BbsI GAAGAC 1 cut(s) 1672
Bbv12I GWGCWC 5 cut(s) 357, 367, 1924, 3025, 3129
BbvI GCAGC 7 cut(s) 253, 431, 662, 967, 1165, 1933, 2152
BceAI ACGGC 5 cut(s) 82, 343, 373, 2716, 3486
BcgI CGANNNNNNTGC 2 cut(s) 3677, 3711
BciT130I CCWGG 8 cut(s) 238, 384, 1566, 1619, 1665, 1793, 2724, 3438
BcnI CCSGG 3 cut(s) 24, 500, 1782
BcoDI GTCTC 8 cut(s) 139, 192, 396, 1287, 1749, 1782, 3059, 3205
BfaI CTAG 4 cut(s) 525, 950, 2391, 3215
BfmI CTRYAG 4 cut(s) 1182, 1908, 2166, 2862
BfrI CTTAAG 2 cut(s) 1015, 2624
BglI GCCNNNNNGGC 3 cut(s) 113, 1166, 3249
BglII AGATCT 1 cut(s) 2594
BlpI GCTNAGC 1 cut(s) 366
BmcAI AGTACT 2 cut(s) 1498, 3166
Bme18I GGWCC 4 cut(s) 846, 1009, 2794, 3745
BmeT110I CYCGRG 3 cut(s) 182, 2010, 3160
BmgBI CACGTC 2 cut(s) 2304, 3177
BmiI GGNNCC 6 cut(s) 199, 504, 823, 847, 2621, 3481
BmrI ACTGGG 2 cut(s) 1136, 3357
BmuI ACTGGG 2 cut(s) 1136, 3357
BoxI GACNNNNGTC 1 cut(s) 1741
BpiI GAAGAC 1 cut(s) 1672
BplI GAGNNNNNCTC 2 cut(s) 341, 373
BpmI CTGGAG 3 cut(s) 343, 2983, 3717
Bpu1102I GCTNAGC 1 cut(s) 366
BpuEI CTTGAG 3 cut(s) 450, 1255, 2508
BpuMI CCSGG 3 cut(s) 24, 500, 1782
Bsa29I ATCGAT 1 cut(s) 75
BsaAI YACGTR 2 cut(s) 2715, 3371
BsaBI GATNNNNATC 1 cut(s) 2658
BsaI GGTCTC 3 cut(s) 1287, 1749, 1782
BsaWI WCCGGW 1 cut(s) 194
BsaXI ACNNNNNCTCC 2 cut(s) 74, 104
Bsc4I CCNNNNNNNGG 4 cut(s) 1859, 1972, 2695, 3443
Bse118I RCCGGY 1 cut(s) 200
Bse21I CCTNAGG 1 cut(s) 2472
Bse8I GATNNNNATC 1 cut(s) 2658
BseBI CCWGG 8 cut(s) 238, 384, 1566, 1619, 1665, 1793, 2724, 3438
BseCI ATCGAT 1 cut(s) 75
BseJI GATNNNNATC 1 cut(s) 2658
BseLI CCNNNNNNNGG 4 cut(s) 1859, 1972, 2695, 3443
BseMII CTCAG 7 cut(s) 380, 1464, 2105, 2486, 2618, 2685, 3249
BseRI GAGGAG 2 cut(s) 365, 2592
BseSI GKGCMC 2 cut(s) 1924, 3494
BseXI GCAGC 7 cut(s) 253, 431, 662, 967, 1165, 1933, 2152
BsgI GTGCAG 2 cut(s) 523, 2737
Bsh1236I CGCG 2 cut(s) 104, 894
Bsh1285I CGRYCG 1 cut(s) 148
BshNI GGYRCC 3 cut(s) 502, 2619, 3479
BshVI ATCGAT 1 cut(s) 75
BsiEI CGRYCG 1 cut(s) 148
BsiHKAI GWGCWC 5 cut(s) 357, 367, 1924, 3025, 3129
BsiHKCI CYCGRG 3 cut(s) 182, 2010, 3160
BsiSI CCGG 5 cut(s) 23, 195, 201, 499, 1782
BsiWI CGTACG 1 cut(s) 99
BslFI GGGAC 7 cut(s) 173, 1456, 1750, 2359, 2490, 3021, 3797
BslI CCNNNNNNNGG 4 cut(s) 1859, 1972, 2695, 3443
BsmAI GTCTC 8 cut(s) 139, 192, 396, 1287, 1749, 1782, 3059, 3205
BsmBI CGTCTC 3 cut(s) 139, 396, 3059
BsmFI GGGAC 7 cut(s) 173, 1456, 1750, 2359, 2490, 3021, 3797
BsmI GAATGC 2 cut(s) 1588, 2890
Bso31I GGTCTC 3 cut(s) 1287, 1749, 1782
BsoBI CYCGRG 3 cut(s) 182, 2010, 3160
Bsp1286I GDGCHC 7 cut(s) 357, 367, 1782, 1924, 3025, 3129, 3494
Bsp1720I GCTNAGC 1 cut(s) 366
Bsp19I CCATGG 1 cut(s) 825
Bsp68I TCGCGA 1 cut(s) 894
BspACI CCGC 8 cut(s) 61, 104, 330, 333, 747, 1545, 2868, 3803
BspCNI CTCAG 7 cut(s) 379, 1465, 2106, 2485, 2617, 2684, 3250
BspDI ATCGAT 1 cut(s) 75
BspFNI CGCG 2 cut(s) 104, 894
BspHI TCATGA 1 cut(s) 120
BspLI GGNNCC 6 cut(s) 199, 504, 823, 847, 2621, 3481
BspMAI CTGCAG 2 cut(s) 1912, 2170
BspPI GGATC 7 cut(s) 308, 609, 708, 2424, 2462, 2654, 2734
BspT107I GGYRCC 3 cut(s) 502, 2619, 3479
BspTI CTTAAG 2 cut(s) 1015, 2624
BspTNI GGTCTC 3 cut(s) 1287, 1749, 1782
BsrBI CCGCTC 1 cut(s) 749
BsrFI RCCGGY 1 cut(s) 200
BssAI RCCGGY 1 cut(s) 200
BssSI CACGAG 1 cut(s) 704
BssT1I CCWWGG 6 cut(s) 300, 825, 2103, 2988, 3532, 3748
Bst2BI CACGAG 1 cut(s) 704
Bst2UI CCWGG 8 cut(s) 238, 384, 1566, 1619, 1665, 1793, 2724, 3438
Bst4CI ACNGT 7 cut(s) 2135, 2286, 2423, 3012, 3677, 3811, 3835
Bst6I CTCTTC 6 cut(s) 222, 342, 666, 1255, 2785, 3324
BstAFI CTTAAG 2 cut(s) 1015, 2624
BstAPI GCANNNNNTGC 1 cut(s) 3557
BstBAI YACGTR 2 cut(s) 2715, 3371
BstC8I GCNNGC 8 cut(s) 519, 892, 1305, 1545, 1718, 1854, 2501, 3364
BstDSI CCRYGG 2 cut(s) 325, 825
BstEII GGTNACC 1 cut(s) 3805
BstFNI CGCG 2 cut(s) 104, 894
BstMAI GTCTC 8 cut(s) 139, 192, 396, 1287, 1749, 1782, 3059, 3205
BstMCI CGRYCG 1 cut(s) 148
BstNI CCWGG 8 cut(s) 238, 384, 1566, 1619, 1665, 1793, 2724, 3438
BstNSI RCATGY 2 cut(s) 3275, 3282
BstPAI GACNNNNGTC 1 cut(s) 1741
BstPI GGTNACC 1 cut(s) 3805
BstSFI CTRYAG 4 cut(s) 1182, 1908, 2166, 2862
BstSLI GKGCMC 2 cut(s) 1924, 3494
BstUI CGCG 2 cut(s) 104, 894
BstV1I GCAGC 7 cut(s) 253, 431, 662, 967, 1165, 1933, 2152
BstV2I GAAGAC 1 cut(s) 1672
BstX2I RGATCY 3 cut(s) 700, 2594, 2659
BstXI CCANNNNNNTGG 1 cut(s) 1214
BstYI RGATCY 3 cut(s) 700, 2594, 2659
Bsu15I ATCGAT 1 cut(s) 75
Bsu36I CCTNAGG 1 cut(s) 2472
BsuTUI ATCGAT 1 cut(s) 75
BtgI CCRYGG 2 cut(s) 325, 825
BtgZI GCGATG 2 cut(s) 304, 909
BtrI CACGTC 2 cut(s) 2304, 3177
BtsI GCAGTG 4 cut(s) 166, 519, 1139, 1905
BtsIMutI CAGTG 9 cut(s) 166, 367, 519, 965, 1139, 1905, 1935, 2861, 3082
BtuMI TCGCGA 1 cut(s) 894
Cac8I GCNNGC 8 cut(s) 519, 892, 1305, 1545, 1718, 1854, 2501, 3364
CciI TCATGA 1 cut(s) 120
Cfr10I RCCGGY 1 cut(s) 200
ClaI ATCGAT 1 cut(s) 75
DraI TTTAAA 2 cut(s) 628, 2157
DraIII CACNNNGTG 1 cut(s) 1072
Eam1104I CTCTTC 6 cut(s) 222, 342, 666, 1255, 2785, 3324
EarI CTCTTC 6 cut(s) 222, 342, 666, 1255, 2785, 3324
Eco130I CCWWGG 6 cut(s) 300, 825, 2103, 2988, 3532, 3748
Eco147I AGGCCT 1 cut(s) 686
Eco24I GRGCYC 1 cut(s) 1782
Eco31I GGTCTC 3 cut(s) 1287, 1749, 1782
Eco47I GGWCC 4 cut(s) 846, 1009, 2794, 3745
Eco57I CTGAAG 5 cut(s) 647, 1094, 1469, 1835, 3447
Eco72I CACGTG 1 cut(s) 2715
Eco81I CCTNAGG 1 cut(s) 2472
Eco88I CYCGRG 3 cut(s) 182, 2010, 3160
Eco91I GGTNACC 1 cut(s) 3805
EcoO109I RGGNCCY 1 cut(s) 1009
EcoO65I GGTNACC 1 cut(s) 3805
EcoRI GAATTC 2 cut(s) 1459, 2031
EcoRII CCWGG 8 cut(s) 236, 382, 1564, 1617, 1663, 1791, 2722, 3436
EcoT14I CCWWGG 6 cut(s) 300, 825, 2103, 2988, 3532, 3748
EcoT22I ATGCAT 3 cut(s) 442, 2092, 3562
EcoT38I GRGCYC 1 cut(s) 1782
ErhI CCWWGG 6 cut(s) 300, 825, 2103, 2988, 3532, 3748
Esp3I CGTCTC 3 cut(s) 139, 396, 3059
FalI AAGNNNNNCTT 4 cut(s) 2051, 2083, 2517, 2549
FaqI GGGAC 7 cut(s) 173, 1456, 1750, 2359, 2490, 3021, 3797
FauI CCCGC 1 cut(s) 1552
FauNDI CATATG 2 cut(s) 1287, 2251
FblI GTMKAC 1 cut(s) 3687
FriOI GRGCYC 1 cut(s) 1782
FspBI CTAG 4 cut(s) 525, 950, 2391, 3215
GsuI CTGGAG 3 cut(s) 343, 2983, 3717
HapII CCGG 5 cut(s) 23, 195, 201, 499, 1782
HincII GTYRAC 3 cut(s) 2995, 3673, 3688
HindII GTYRAC 3 cut(s) 2995, 3673, 3688
HindIII AAGCTT 2 cut(s) 587, 2293
HpaI GTTAAC 2 cut(s) 2995, 3673
HpaII CCGG 5 cut(s) 23, 195, 201, 499, 1782
HphI GGTGA 4 cut(s) 1100, 1443, 2129, 3497
Hpy166II GTNNAC 8 cut(s) 637, 982, 1922, 2433, 2995, 3673, 3688, 3783
Hpy8I GTNNAC 8 cut(s) 637, 982, 1922, 2433, 2995, 3673, 3688, 3783
Hpy99I CGWCG 1 cut(s) 3689
HpyCH4III ACNGT 7 cut(s) 2135, 2286, 2423, 3012, 3677, 3811, 3835
HpyCH4IV ACGT 8 cut(s) 633, 2173, 2224, 2303, 2714, 3176, 3370, 3684
HpySE526I ACGT 8 cut(s) 633, 2173, 2224, 2303, 2714, 3176, 3370, 3684
KpnI GGTACC 2 cut(s) 2623, 3483
KspAI GTTAAC 2 cut(s) 2995, 3673
LmnI GCTCC 9 cut(s) 26, 230, 352, 427, 821, 1513, 1943, 2201, 3028
Lsp1109I GCAGC 7 cut(s) 253, 431, 662, 967, 1165, 1933, 2152
MaeI CTAG 4 cut(s) 525, 950, 2391, 3215
MaeII ACGT 8 cut(s) 633, 2173, 2224, 2303, 2714, 3176, 3370, 3684
MaeIII GTNAC 8 cut(s) 1088, 1228, 1449, 1691, 2135, 3274, 3503, 3805
MbiI CCGCTC 1 cut(s) 749
MfeI CAATTG 2 cut(s) 2769, 2827
MflI RGATCY 3 cut(s) 700, 2594, 2659
MhlI GDGCHC 7 cut(s) 357, 367, 1782, 1924, 3025, 3129, 3494
MlyI GAGTC 4 cut(s) 138, 194, 2783, 3417
MmeI TCCRAC 7 cut(s) 592, 694, 1001, 1061, 1315, 3588, 3705
Mph1103I ATGCAT 3 cut(s) 442, 2092, 3562
MroXI GAANNNNTTC 2 cut(s) 1975, 3318
MslI CAYNNNNRTG 4 cut(s) 77, 360, 1132, 1212
MspCI CTTAAG 2 cut(s) 1015, 2624
MspI CCGG 5 cut(s) 23, 195, 201, 499, 1782
MunI CAATTG 2 cut(s) 2769, 2827
Mva1269I GAATGC 2 cut(s) 1588, 2890
MvaI CCWGG 8 cut(s) 238, 384, 1566, 1619, 1665, 1793, 2724, 3438
MvnI CGCG 2 cut(s) 104, 894
NciI CCSGG 3 cut(s) 24, 500, 1782
NcoI CCATGG 1 cut(s) 825
NdeI CATATG 2 cut(s) 1287, 2251
NlaIV GGNNCC 6 cut(s) 199, 504, 823, 847, 2621, 3481
NmeAIII GCCGAG 1 cut(s) 1991
NmuCI GTSAC 5 cut(s) 1088, 1228, 1449, 2135, 3503
NruI TCGCGA 1 cut(s) 894
NsiI ATGCAT 3 cut(s) 442, 2092, 3562
NspI RCATGY 2 cut(s) 3275, 3282
OliI CACNNNNGTG 2 cut(s) 360, 1132
PaeR7I CTCGAG 1 cut(s) 182
PagI TCATGA 1 cut(s) 120
PceI AGGCCT 1 cut(s) 686
PciI ACATGT 1 cut(s) 3271
PcsI WCGNNNNNNNCGW 4 cut(s) 53, 72, 180, 2179
PctI GAATGC 2 cut(s) 1588, 2890
PdmI GAANNNNTTC 2 cut(s) 1975, 3318
Pfl23II CGTACG 1 cut(s) 99
PflFI GACNNNGTC 1 cut(s) 1447
PfoI TCCNGGA 4 cut(s) 22, 1617, 2722, 3436
Ple19I CGATCG 1 cut(s) 148
PleI GAGTC 4 cut(s) 137, 193, 2782, 3416
PmaCI CACGTG 1 cut(s) 2715
PmlI CACGTG 1 cut(s) 2715
PpsI GAGTC 4 cut(s) 137, 193, 2782, 3416
Ppu21I YACGTR 2 cut(s) 2715, 3371
PpuMI RGGWCCY 1 cut(s) 1009
PscI ACATGT 1 cut(s) 3271
PshAI GACNNNNGTC 1 cut(s) 1741
PshBI ATTAAT 1 cut(s) 804
PsiI TTATAA 1 cut(s) 1593
Psp1406I AACGTT 1 cut(s) 2224
Psp5II RGGWCCY 1 cut(s) 1009
Psp6I CCWGG 8 cut(s) 236, 382, 1564, 1617, 1663, 1791, 2722, 3436
PspCI CACGTG 1 cut(s) 2715
PspEI GGTNACC 1 cut(s) 3805
PspGI CCWGG 8 cut(s) 236, 382, 1564, 1617, 1663, 1791, 2722, 3436
PspLI CGTACG 1 cut(s) 99
PspN4I GGNNCC 6 cut(s) 199, 504, 823, 847, 2621, 3481
PspPPI RGGWCCY 1 cut(s) 1009
PspXI VCTCGAGB 1 cut(s) 182
PstI CTGCAG 2 cut(s) 1912, 2170
PsuI RGATCY 3 cut(s) 700, 2594, 2659
PsyI GACNNNGTC 1 cut(s) 1447
PvuI CGATCG 1 cut(s) 148
RruI TCGCGA 1 cut(s) 894
RseI CAYNNNNRTG 4 cut(s) 77, 360, 1132, 1212
SalI GTCGAC 1 cut(s) 3686
ScaI AGTACT 2 cut(s) 1498, 3166
SchI GAGTC 4 cut(s) 138, 194, 2783, 3417
SduI GDGCHC 7 cut(s) 357, 367, 1782, 1924, 3025, 3129, 3494
SfcI CTRYAG 4 cut(s) 1182, 1908, 2166, 2862
Sfr274I CTCGAG 1 cut(s) 182
SinI GGWCC 4 cut(s) 846, 1009, 2794, 3745
SlaI CTCGAG 1 cut(s) 182
SmiMI CAYNNNNRTG 4 cut(s) 77, 360, 1132, 1212
SmlI CTYRAG 6 cut(s) 182, 465, 1015, 1270, 2523, 2624
SmoI CTYRAG 6 cut(s) 182, 465, 1015, 1270, 2523, 2624
SseBI AGGCCT 1 cut(s) 686
SsiI CCGC 8 cut(s) 61, 104, 330, 333, 747, 1545, 2868, 3803
SspI AATATT 2 cut(s) 571, 3333
SspMI CTAG 4 cut(s) 525, 950, 2391, 3215
StuI AGGCCT 1 cut(s) 686
StyI CCWWGG 6 cut(s) 300, 825, 2103, 2988, 3532, 3748
TaaI ACNGT 7 cut(s) 2135, 2286, 2423, 3012, 3677, 3811, 3835
TaiI ACGT 8 cut(s) 636, 2176, 2227, 2306, 2717, 3179, 3373, 3687
TaqII GACCGA 1 cut(s) 326
TatI WGTACW 5 cut(s) 553, 1496, 1810, 3164, 3736
TauI GCSGC 5 cut(s) 107, 333, 336, 749, 2870
TscAI CASTG 9 cut(s) 173, 367, 519, 972, 1139, 1912, 1942, 2861, 3082
TseFI GTSAC 5 cut(s) 1088, 1228, 1449, 2135, 3503
TseI GCWGC 7 cut(s) 241, 419, 675, 955, 1178, 1946, 2165
Tsp45I GTSAC 5 cut(s) 1088, 1228, 1449, 2135, 3503
TspGWI ACGGA 2 cut(s) 464, 3046
TspRI CASTG 9 cut(s) 173, 367, 519, 972, 1139, 1912, 1942, 2861, 3082
Tth111I GACNNNGTC 1 cut(s) 1447
Vha464I CTTAAG 2 cut(s) 1015, 2624
VneI GTGCAC 1 cut(s) 1920
VpaK11BI GGWCC 4 cut(s) 846, 1009, 2794, 3745
VspI ATTAAT 1 cut(s) 804
XceI RCATGY 2 cut(s) 3275, 3282
XcmI CCANNNNNNNNNTGG 2 cut(s) 856, 1625
XhoI CTCGAG 1 cut(s) 182
XmiI GTMKAC 1 cut(s) 3687
XmnI GAANNNNTTC 2 cut(s) 1975, 3318
XspI CTAG 4 cut(s) 525, 950, 2391, 3215
ZrmI AGTACT 2 cut(s) 1498, 3166
Zsp2I ATGCAT 3 cut(s) 442, 2092, 3562
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.