SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G05130 |
| fragaria_vesca | FvH4_5g29290 |
| malus_domestica | MD15G1139300.v1.1 |
| prunus_persica | Prupe.7G028900_v2.0.a1 |
| pyrus_communis | pycom520g00520 |
| rosa_chinensis | RchiOBHm_Chr7g0222151 |
| rosa_laevigata | RLG00000002088 |
| rosa_multiflora | Rmu_sc0009183.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00237370 |
| rosa_rugosa | Rorug07G0205700 |
| rosa_samantha | Rh7BG336900 Rh7DG345000 |
| rosa_wichuraiana | Rw7G029390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1399 |
| AccB1I | GGYRCC | 2 cut(s) | 50, 2471 |
| AccI | GTMKAC | 1 cut(s) | 923 |
| AccII | CGCG | 6 cut(s) | 87, 165, 238, 240, 362, 2316 |
| AclWI | GGATC | 1 cut(s) | 2319 |
| AcoI | YGGCCR | 3 cut(s) | 61, 151, 1130 |
| AcsI | RAATTY | 2 cut(s) | 565, 1123 |
| AcuI | CTGAAG | 4 cut(s) | 1530, 1841, 2208, 2237 |
| AcyI | GRCGYC | 1 cut(s) | 198 |
| AfaI | GTAC | 6 cut(s) | 41, 416, 1082, 1608, 1642, 2091 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 70, 665 |
| AflII | CTTAAG | 1 cut(s) | 1073 |
| AjnI | CCWGG | 2 cut(s) | 270, 1015 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1768, 1800, 1827, 1859 |
| Alw21I | GWGCWC | 2 cut(s) | 1822, 2155 |
| Alw26I | GTCTC | 2 cut(s) | 1478, 1711 |
| Alw44I | GTGCAC | 1 cut(s) | 1818 |
| AlwI | GGATC | 1 cut(s) | 2319 |
| AoxI | GGCC | 7 cut(s) | 61, 76, 151, 246, 334, 1013, 1130 |
| ApaLI | GTGCAC | 1 cut(s) | 1818 |
| ApeKI | GCWGC | 5 cut(s) | 340, 866, 1363, 1574, 1747 |
| ApoI | RAATTY | 2 cut(s) | 565, 1123 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 153, 185, 290, 322, 694, 726 |
| AspLEI | GCGC | 8 cut(s) | 167, 240, 242, 332, 1186, 1368, 1863, 2194 |
| AspS9I | GGNCC | 1 cut(s) | 1048 |
| AsuC2I | CCSGG | 1 cut(s) | 136 |
| AsuHPI | GGTGA | 5 cut(s) | 49, 400, 809, 1769, 2312 |
| AsuII | TTCGAA | 1 cut(s) | 2062 |
| AvaII | GGWCC | 1 cut(s) | 1048 |
| BaeGI | GKGCMC | 2 cut(s) | 965, 1822 |
| BalI | TGGCCA | 1 cut(s) | 1132 |
| BanI | GGYRCC | 2 cut(s) | 50, 2471 |
| BanII | GRGCYC | 1 cut(s) | 2155 |
| BbsI | GAAGAC | 1 cut(s) | 1968 |
| Bbv12I | GWGCWC | 2 cut(s) | 1822, 2155 |
| BbvCI | CCTCAGC | 1 cut(s) | 1065 |
| BbvI | GCAGC | 5 cut(s) | 352, 853, 1375, 1561, 1734 |
| BceAI | ACGGC | 4 cut(s) | 152, 197, 343, 1875 |
| BciT130I | CCWGG | 2 cut(s) | 272, 1017 |
| BclI | TGATCA | 1 cut(s) | 504 |
| BcnI | CCSGG | 1 cut(s) | 136 |
| BcoDI | GTCTC | 2 cut(s) | 1478, 1711 |
| BfaI | CTAG | 4 cut(s) | 759, 998, 1011, 2253 |
| BfmI | CTRYAG | 3 cut(s) | 338, 1406, 1479 |
| BfoI | RGCGCY | 2 cut(s) | 333, 1369 |
| BfrI | CTTAAG | 1 cut(s) | 1073 |
| BfuAI | ACCTGC | 1 cut(s) | 1399 |
| BisI | GCNGC | 9 cut(s) | 174, 177, 341, 363, 867, 1364, 1575, 1631, 1748 |
| BlpI | GCTNAGC | 1 cut(s) | 1242 |
| BlsI | GCNGC | 9 cut(s) | 175, 178, 342, 364, 868, 1365, 1576, 1632, 1749 |
| BmcAI | AGTACT | 1 cut(s) | 41 |
| Bme1390I | CCNGG | 3 cut(s) | 136, 272, 1017 |
| Bme18I | GGWCC | 1 cut(s) | 1048 |
| BmgT120I | GGNCC | 1 cut(s) | 1048 |
| BmiI | GGNNCC | 8 cut(s) | 52, 480, 489, 657, 1049, 2274, 2285, 2473 |
| BmrFI | CCNGG | 3 cut(s) | 136, 272, 1017 |
| BmsI | GCATC | 4 cut(s) | 231, 681, 1578, 2179 |
| BpiI | GAAGAC | 1 cut(s) | 1968 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1316, 1348 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1065 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1242 |
| Bpu14I | TTCGAA | 1 cut(s) | 2062 |
| BpuEI | CTTGAG | 4 cut(s) | 1336, 1362, 1655, 2139 |
| BpuMI | CCSGG | 1 cut(s) | 136 |
| BsaAI | YACGTR | 1 cut(s) | 1495 |
| BsaHI | GRCGYC | 1 cut(s) | 198 |
| BsaJI | CCNNGG | 4 cut(s) | 243, 495, 872, 2276 |
| BsaWI | WCCGGW | 4 cut(s) | 652, 821, 1050, 2322 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2264, 2294 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 70, 665 |
| Bse118I | RCCGGY | 1 cut(s) | 59 |
| Bse1I | ACTGG | 3 cut(s) | 37, 1267, 1352 |
| Bse3DI | GCAATG | 2 cut(s) | 907, 2313 |
| BseBI | CCWGG | 2 cut(s) | 272, 1017 |
| BseDI | CCNNGG | 4 cut(s) | 243, 495, 872, 2276 |
| BseGI | GGATG | 6 cut(s) | 433, 454, 808, 1183, 1539, 2347 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 70, 665 |
| BseMI | GCAATG | 2 cut(s) | 907, 2313 |
| BseMII | CTCAG | 4 cut(s) | 396, 882, 1056, 1932 |
| BseNI | ACTGG | 3 cut(s) | 37, 1267, 1352 |
| BsePI | GCGCGC | 1 cut(s) | 238 |
| BseRI | GAGGAG | 1 cut(s) | 1082 |
| BseSI | GKGCMC | 2 cut(s) | 965, 1822 |
| BseX3I | CGGCCG | 1 cut(s) | 61 |
| BseXI | GCAGC | 5 cut(s) | 352, 853, 1375, 1561, 1734 |
| BseYI | CCCAGC | 2 cut(s) | 541, 2287 |
| BsgI | GTGCAG | 2 cut(s) | 852, 1382 |
| Bsh1236I | CGCG | 6 cut(s) | 87, 165, 238, 240, 362, 2316 |
| Bsh1285I | CGRYCG | 2 cut(s) | 64, 653 |
| BshFI | GGCC | 7 cut(s) | 63, 78, 153, 248, 336, 1015, 1132 |
| BshNI | GGYRCC | 2 cut(s) | 50, 2471 |
| BsiEI | CGRYCG | 2 cut(s) | 64, 653 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1822, 2155 |
| BsiSI | CCGG | 7 cut(s) | 48, 60, 136, 653, 822, 1051, 2323 |
| BslFI | GGGAC | 2 cut(s) | 212, 1061 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 70, 665 |
| BsmAI | GTCTC | 2 cut(s) | 1478, 1711 |
| BsmFI | GGGAC | 2 cut(s) | 212, 1061 |
| BsmI | GAATGC | 2 cut(s) | 1210, 1310 |
| BsnI | GGCC | 7 cut(s) | 63, 78, 153, 248, 336, 1015, 1132 |
| Bsp119I | TTCGAA | 1 cut(s) | 2062 |
| Bsp1286I | GDGCHC | 3 cut(s) | 965, 1822, 2155 |
| Bsp143I | GATC | 8 cut(s) | 192, 207, 504, 1666, 1909, 2311, 2455, 2479 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1242 |
| Bsp19I | CCATGG | 1 cut(s) | 2276 |
| BspANI | GGCC | 7 cut(s) | 63, 78, 153, 248, 336, 1015, 1132 |
| BspCNI | CTCAG | 4 cut(s) | 397, 883, 1057, 1931 |
| BspFNI | CGCG | 6 cut(s) | 87, 165, 238, 240, 362, 2316 |
| BspLI | GGNNCC | 8 cut(s) | 52, 480, 489, 657, 1049, 2274, 2285, 2473 |
| BspMAI | CTGCAG | 2 cut(s) | 342, 1410 |
| BspMI | ACCTGC | 1 cut(s) | 1399 |
| BspPI | GGATC | 1 cut(s) | 2319 |
| BspT104I | TTCGAA | 1 cut(s) | 2062 |
| BspT107I | GGYRCC | 2 cut(s) | 50, 2471 |
| BspTI | CTTAAG | 1 cut(s) | 1073 |
| BsrDI | GCAATG | 2 cut(s) | 907, 2313 |
| BsrFI | RCCGGY | 1 cut(s) | 59 |
| BsrI | ACTGG | 3 cut(s) | 37, 1267, 1352 |
| BssAI | RCCGGY | 1 cut(s) | 59 |
| BssECI | CCNNGG | 4 cut(s) | 243, 495, 872, 2276 |
| BssHII | GCGCGC | 1 cut(s) | 238 |
| BssMI | GATC | 8 cut(s) | 192, 207, 504, 1666, 1909, 2311, 2455, 2479 |
| BssNI | GRCGYC | 1 cut(s) | 198 |
| BssT1I | CCWWGG | 4 cut(s) | 243, 495, 872, 2276 |
| Bst2UI | CCWGG | 2 cut(s) | 272, 1017 |
| Bst4CI | ACNGT | 8 cut(s) | 424, 470, 755, 1106, 1524, 1606, 1905, 2200 |
| Bst6I | CTCTTC | 3 cut(s) | 588, 593, 1544 |
| BstACI | GRCGYC | 1 cut(s) | 198 |
| BstAFI | CTTAAG | 1 cut(s) | 1073 |
| BstBAI | YACGTR | 1 cut(s) | 1495 |
| BstBI | TTCGAA | 1 cut(s) | 2062 |
| BstC8I | GCNNGC | 8 cut(s) | 240, 334, 338, 460, 1370, 1374, 1406, 2208 |
| BstDEI | CTNAG | 7 cut(s) | 405, 662, 891, 1065, 1242, 1610, 1918 |
| BstDSI | CCRYGG | 1 cut(s) | 2276 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 663 |
| BstF5I | GGATG | 6 cut(s) | 433, 454, 808, 1183, 1539, 2347 |
| BstFNI | CGCG | 6 cut(s) | 87, 165, 238, 240, 362, 2316 |
| BstH2I | RGCGCY | 2 cut(s) | 333, 1369 |
| BstHHI | GCGC | 8 cut(s) | 167, 240, 242, 332, 1186, 1368, 1863, 2194 |
| BstKTI | GATC | 8 cut(s) | 195, 210, 507, 1669, 1912, 2314, 2458, 2482 |
| BstMAI | GTCTC | 2 cut(s) | 1478, 1711 |
| BstMBI | GATC | 8 cut(s) | 192, 207, 504, 1666, 1909, 2311, 2455, 2479 |
| BstMCI | CGRYCG | 2 cut(s) | 64, 653 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 84, 173, 182, 487, 1369, 2429 |
| BstNI | CCWGG | 2 cut(s) | 272, 1017 |
| BstSCI | CCNGG | 3 cut(s) | 134, 270, 1015 |
| BstSFI | CTRYAG | 3 cut(s) | 338, 1406, 1479 |
| BstSLI | GKGCMC | 2 cut(s) | 965, 1822 |
| BstUI | CGCG | 6 cut(s) | 87, 165, 238, 240, 362, 2316 |
| BstV1I | GCAGC | 5 cut(s) | 352, 853, 1375, 1561, 1734 |
| BstV2I | GAAGAC | 1 cut(s) | 1968 |
| BstZI | CGGCCG | 1 cut(s) | 61 |
| BsuRI | GGCC | 7 cut(s) | 63, 78, 153, 248, 336, 1015, 1132 |
| BtgI | CCRYGG | 1 cut(s) | 2276 |
| BtgZI | GCGATG | 1 cut(s) | 395 |
| BtsCI | GGATG | 6 cut(s) | 433, 454, 808, 1183, 1539, 2347 |
| BtsI | GCAGTG | 1 cut(s) | 2247 |
| BtsIMutI | CAGTG | 3 cut(s) | 1602, 2030, 2247 |
| BveI | ACCTGC | 1 cut(s) | 1399 |
| Cac8I | GCNNGC | 8 cut(s) | 240, 334, 338, 460, 1370, 1374, 1406, 2208 |
| CfoI | GCGC | 8 cut(s) | 167, 240, 242, 332, 1186, 1368, 1863, 2194 |
| Cfr10I | RCCGGY | 1 cut(s) | 59 |
| Cfr13I | GGNCC | 1 cut(s) | 1048 |
| CseI | GACGC | 2 cut(s) | 206, 368 |
| Csp6I | GTAC | 6 cut(s) | 40, 415, 1081, 1607, 1641, 2090 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 937, 972 |
| CviAII | CATG | 4 cut(s) | 984, 1972, 2277, 2494 |
| CviQI | GTAC | 6 cut(s) | 40, 415, 1081, 1607, 1641, 2090 |
| DdeI | CTNAG | 7 cut(s) | 405, 662, 891, 1065, 1242, 1610, 1918 |
| DpnI | GATC | 8 cut(s) | 194, 209, 506, 1668, 1911, 2313, 2457, 2481 |
| DpnII | GATC | 8 cut(s) | 192, 207, 504, 1666, 1909, 2311, 2455, 2479 |
| EaeI | YGGCCR | 3 cut(s) | 61, 151, 1130 |
| EagI | CGGCCG | 1 cut(s) | 61 |
| Eam1104I | CTCTTC | 3 cut(s) | 588, 593, 1544 |
| EarI | CTCTTC | 3 cut(s) | 588, 593, 1544 |
| EciI | GGCGGA | 1 cut(s) | 307 |
| Ecl136II | GAGCTC | 1 cut(s) | 2153 |
| EclXI | CGGCCG | 1 cut(s) | 61 |
| Eco130I | CCWWGG | 4 cut(s) | 243, 495, 872, 2276 |
| Eco24I | GRGCYC | 1 cut(s) | 2155 |
| Eco47I | GGWCC | 1 cut(s) | 1048 |
| Eco52I | CGGCCG | 1 cut(s) | 61 |
| Eco53kI | GAGCTC | 1 cut(s) | 2153 |
| Eco57I | CTGAAG | 4 cut(s) | 1530, 1841, 2208, 2237 |
| EcoICRI | GAGCTC | 1 cut(s) | 2153 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 663 |
| EcoRI | GAATTC | 1 cut(s) | 565 |
| EcoRII | CCWGG | 2 cut(s) | 270, 1015 |
| EcoT14I | CCWWGG | 4 cut(s) | 243, 495, 872, 2276 |
| EcoT38I | GRGCYC | 1 cut(s) | 2155 |
| ErhI | CCWWGG | 4 cut(s) | 243, 495, 872, 2276 |
| FaeI | CATG | 4 cut(s) | 987, 1975, 2280, 2497 |
| FaqI | GGGAC | 2 cut(s) | 212, 1061 |
| FatI | CATG | 4 cut(s) | 983, 1971, 2276, 2493 |
| FauI | CCCGC | 2 cut(s) | 1158, 1377 |
| FbaI | TGATCA | 1 cut(s) | 504 |
| FblI | GTMKAC | 1 cut(s) | 923 |
| Fnu4HI | GCNGC | 9 cut(s) | 174, 177, 341, 363, 867, 1364, 1575, 1631, 1748 |
| FokI | GGATG | 6 cut(s) | 440, 461, 815, 1190, 1546, 2354 |
| FriOI | GRGCYC | 1 cut(s) | 2155 |
| Fsp4HI | GCNGC | 9 cut(s) | 174, 177, 341, 363, 867, 1364, 1575, 1631, 1748 |
| FspBI | CTAG | 4 cut(s) | 759, 998, 1011, 2253 |
| GlaI | GCGC | 8 cut(s) | 166, 239, 241, 331, 1185, 1367, 1862, 2193 |
| GluI | GCNGC | 9 cut(s) | 174, 177, 341, 363, 867, 1364, 1575, 1631, 1748 |
| GsaI | CCCAGC | 2 cut(s) | 545, 2291 |
| HaeII | RGCGCY | 2 cut(s) | 333, 1369 |
| HaeIII | GGCC | 7 cut(s) | 63, 78, 153, 248, 336, 1015, 1132 |
| HapII | CCGG | 7 cut(s) | 48, 60, 136, 653, 822, 1051, 2323 |
| HgaI | GACGC | 2 cut(s) | 206, 368 |
| HhaI | GCGC | 8 cut(s) | 167, 240, 242, 332, 1186, 1368, 1863, 2194 |
| Hin1I | GRCGYC | 1 cut(s) | 198 |
| Hin1II | CATG | 4 cut(s) | 987, 1975, 2280, 2497 |
| Hin6I | GCGC | 8 cut(s) | 165, 238, 240, 330, 1184, 1366, 1861, 2192 |
| HinP1I | GCGC | 8 cut(s) | 165, 238, 240, 330, 1184, 1366, 1861, 2192 |
| HincII | GTYRAC | 2 cut(s) | 627, 1095 |
| HindII | GTYRAC | 2 cut(s) | 627, 1095 |
| HindIII | AAGCTT | 3 cut(s) | 1354, 1836, 2430 |
| HpaI | GTTAAC | 1 cut(s) | 1095 |
| HpaII | CCGG | 7 cut(s) | 48, 60, 136, 653, 822, 1051, 2323 |
| HphI | GGTGA | 5 cut(s) | 49, 400, 809, 1769, 2312 |
| Hpy166II | GTNNAC | 8 cut(s) | 277, 627, 924, 948, 1095, 1520, 1820, 2320 |
| Hpy188III | TCNNGA | 4 cut(s) | 1276, 1315, 2081, 2226 |
| Hpy8I | GTNNAC | 8 cut(s) | 277, 627, 924, 948, 1095, 1520, 1820, 2320 |
| Hpy99I | CGWCG | 5 cut(s) | 173, 200, 218, 299, 362 |
| HpyCH4III | ACNGT | 8 cut(s) | 424, 470, 755, 1106, 1524, 1606, 1905, 2200 |
| HpyCH4IV | ACGT | 2 cut(s) | 1494, 1516 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 84, 173, 182, 487, 1369, 2429 |
| HpyF3I | CTNAG | 7 cut(s) | 405, 662, 891, 1065, 1242, 1610, 1918 |
| HpySE526I | ACGT | 2 cut(s) | 1494, 1516 |
| Hsp92I | GRCGYC | 1 cut(s) | 198 |
| Hsp92II | CATG | 4 cut(s) | 987, 1975, 2280, 2497 |
| HspAI | GCGC | 8 cut(s) | 165, 238, 240, 330, 1184, 1366, 1861, 2192 |
| Ksp22I | TGATCA | 1 cut(s) | 504 |
| KspAI | GTTAAC | 1 cut(s) | 1095 |
| Kzo9I | GATC | 8 cut(s) | 192, 207, 504, 1666, 1909, 2311, 2455, 2479 |
| LmnI | GCTCC | 7 cut(s) | 478, 487, 514, 655, 863, 1069, 2272 |
| Lsp1109I | GCAGC | 5 cut(s) | 352, 853, 1375, 1561, 1734 |
| LweI | GCATC | 4 cut(s) | 231, 681, 1578, 2179 |
| MaeI | CTAG | 4 cut(s) | 759, 998, 1011, 2253 |
| MaeII | ACGT | 2 cut(s) | 1494, 1516 |
| MaeIII | GTNAC | 6 cut(s) | 988, 1225, 1258, 1382, 1674, 2397 |
| MalI | GATC | 8 cut(s) | 194, 209, 506, 1668, 1911, 2313, 2457, 2481 |
| MboI | GATC | 8 cut(s) | 192, 207, 504, 1666, 1909, 2311, 2455, 2479 |
| MhlI | GDGCHC | 3 cut(s) | 965, 1822, 2155 |
| MlsI | TGGCCA | 1 cut(s) | 1132 |
| MluNI | TGGCCA | 1 cut(s) | 1132 |
| MlyI | GAGTC | 3 cut(s) | 132, 697, 1048 |
| MmeI | TCCRAC | 5 cut(s) | 10, 135, 456, 1713, 2250 |
| Mox20I | TGGCCA | 1 cut(s) | 1132 |
| MscI | TGGCCA | 1 cut(s) | 1132 |
| MseI | TTAA | 7 cut(s) | 96, 258, 1074, 1094, 1146, 1194, 1338 |
| Msp20I | TGGCCA | 1 cut(s) | 1132 |
| MspA1I | CMGCKG | 2 cut(s) | 343, 2102 |
| MspCI | CTTAAG | 1 cut(s) | 1073 |
| MspI | CCGG | 7 cut(s) | 48, 60, 136, 653, 822, 1051, 2323 |
| MspR9I | CCNGG | 3 cut(s) | 136, 272, 1017 |
| Mva1269I | GAATGC | 2 cut(s) | 1210, 1310 |
| MvaI | CCWGG | 2 cut(s) | 272, 1017 |
| MvnI | CGCG | 6 cut(s) | 87, 165, 238, 240, 362, 2316 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 84, 173, 182, 487, 1369, 2429 |
| NciI | CCSGG | 1 cut(s) | 136 |
| NcoI | CCATGG | 1 cut(s) | 2276 |
| NdeII | GATC | 8 cut(s) | 192, 207, 504, 1666, 1909, 2311, 2455, 2479 |
| NlaIII | CATG | 4 cut(s) | 987, 1975, 2280, 2497 |
| NlaIV | GGNNCC | 8 cut(s) | 52, 480, 489, 657, 1049, 2274, 2285, 2473 |
| NmeAIII | GCCGAG | 1 cut(s) | 89 |
| NmuCI | GTSAC | 2 cut(s) | 1225, 1674 |
| NspV | TTCGAA | 1 cut(s) | 2062 |
| PauI | GCGCGC | 1 cut(s) | 238 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 156, 165, 222 |
| PctI | GAATGC | 2 cut(s) | 1210, 1310 |
| PfeI | GAWTC | 7 cut(s) | 33, 107, 262, 291, 1646, 2012, 2020 |
| PkrI | GCNGC | 9 cut(s) | 175, 178, 342, 364, 868, 1365, 1576, 1632, 1749 |
| PleI | GAGTC | 3 cut(s) | 131, 697, 1048 |
| PpsI | GAGTC | 3 cut(s) | 131, 697, 1048 |
| Ppu21I | YACGTR | 1 cut(s) | 1495 |
| Psp124BI | GAGCTC | 1 cut(s) | 2155 |
| Psp6I | CCWGG | 2 cut(s) | 270, 1015 |
| PspFI | CCCAGC | 2 cut(s) | 541, 2287 |
| PspGI | CCWGG | 2 cut(s) | 270, 1015 |
| PspN4I | GGNNCC | 8 cut(s) | 52, 480, 489, 657, 1049, 2274, 2285, 2473 |
| PspPI | GGNCC | 1 cut(s) | 1048 |
| PstI | CTGCAG | 2 cut(s) | 342, 1410 |
| PteI | GCGCGC | 1 cut(s) | 238 |
| PvuII | CAGCTG | 2 cut(s) | 343, 2102 |
| RsaI | GTAC | 6 cut(s) | 41, 416, 1082, 1608, 1642, 2091 |
| RsaNI | GTAC | 6 cut(s) | 40, 415, 1081, 1607, 1641, 2090 |
| SacI | GAGCTC | 1 cut(s) | 2155 |
| SaqAI | TTAA | 7 cut(s) | 96, 258, 1074, 1094, 1146, 1194, 1338 |
| SatI | GCNGC | 9 cut(s) | 174, 177, 341, 363, 867, 1364, 1575, 1631, 1748 |
| Sau3AI | GATC | 8 cut(s) | 192, 207, 504, 1666, 1909, 2311, 2455, 2479 |
| Sau96I | GGNCC | 1 cut(s) | 1048 |
| SbfI | CCTGCAGG | 1 cut(s) | 1410 |
| ScaI | AGTACT | 1 cut(s) | 41 |
| SchI | GAGTC | 3 cut(s) | 132, 697, 1048 |
| ScrFI | CCNGG | 3 cut(s) | 136, 272, 1017 |
| SdaI | CCTGCAGG | 1 cut(s) | 1410 |
| SduI | GDGCHC | 3 cut(s) | 965, 1822, 2155 |
| SfaNI | GCATC | 4 cut(s) | 231, 681, 1578, 2179 |
| SfcI | CTRYAG | 3 cut(s) | 338, 1406, 1479 |
| SfuI | TTCGAA | 1 cut(s) | 2062 |
| SinI | GGWCC | 1 cut(s) | 1048 |
| SmlI | CTYRAG | 5 cut(s) | 1073, 1315, 1377, 1670, 2154 |
| SmoI | CTYRAG | 5 cut(s) | 1073, 1315, 1377, 1670, 2154 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1410 |
| SspMI | CTAG | 4 cut(s) | 759, 998, 1011, 2253 |
| SstI | GAGCTC | 1 cut(s) | 2155 |
| StyD4I | CCNGG | 3 cut(s) | 134, 270, 1015 |
| StyI | CCWWGG | 4 cut(s) | 243, 495, 872, 2276 |
| TaaI | ACNGT | 8 cut(s) | 424, 470, 755, 1106, 1524, 1606, 1905, 2200 |
| TaiI | ACGT | 2 cut(s) | 1497, 1519 |
| TaqI | TCGA | 8 cut(s) | 159, 195, 216, 294, 523, 1057, 2062, 2368 |
| TatI | WGTACW | 4 cut(s) | 39, 1606, 1640, 2089 |
| TauI | GCSGC | 4 cut(s) | 176, 179, 365, 1633 |
| TfiI | GAWTC | 7 cut(s) | 33, 107, 262, 291, 1646, 2012, 2020 |
| Tru1I | TTAA | 7 cut(s) | 96, 258, 1074, 1094, 1146, 1194, 1338 |
| Tru9I | TTAA | 7 cut(s) | 96, 258, 1074, 1094, 1146, 1194, 1338 |
| TscAI | CASTG | 3 cut(s) | 1609, 2037, 2254 |
| TseFI | GTSAC | 2 cut(s) | 1225, 1674 |
| TseI | GCWGC | 5 cut(s) | 340, 866, 1363, 1574, 1747 |
| Tsp45I | GTSAC | 2 cut(s) | 1225, 1674 |
| TspDTI | ATGAA | 2 cut(s) | 804, 1275 |
| TspGWI | ACGGA | 1 cut(s) | 573 |
| TspRI | CASTG | 3 cut(s) | 1609, 2037, 2254 |
| Vha464I | CTTAAG | 1 cut(s) | 1073 |
| VneI | GTGCAC | 1 cut(s) | 1818 |
| VpaK11BI | GGWCC | 1 cut(s) | 1048 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 663 |
| XapI | RAATTY | 2 cut(s) | 565, 1123 |
| XmiI | GTMKAC | 1 cut(s) | 923 |
| XspI | CTAG | 4 cut(s) | 759, 998, 1011, 2253 |
| ZrmI | AGTACT | 1 cut(s) | 41 |