Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010574

Physical Location & Seq

Genomic Coordinates Forward (+)

56272989 .. 56280624

Gene Structure 7636 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ20823

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

ATGTCTGCTCCATTGACACCTTCTAAGAGACCGCACCAGGAGGACCCTTCGGAGCCGAATGGGAAAGGAAAGTTACAAAAGTCTGATGATGATCAACCTACTAATACTTCCTCTGGCAATGCTGTTTTTCGGGTAGTTTGCCCCGAGTCGAAAATTGGTTGTGTTACTGGTGAAGGTGGCTCTGGCATATCCGAGATATATCAGGAGACTCTGGTGAAGGTGAGAGTTGAGGAAAGTGTACCCGGCTGCGACGAAAGAGTTATTGTCATTGGTTGGGATGGAGAGAATAGAGTTGATATTGAAAAGAAGGAAGAGAAGGAAGATGTTTCGATTGATGATTCAGAACGCCGCGAAAAAGTAAGTCCTGCATCCGTCAAGAAGGCTCTGCAACTTGTGTTTGAGAGAATGGTTGAAGGGGAAAGAGAGACTGATGGAGGGGATGGAGATGGTAAGAAGTCATTGACAATTGTTTTGAGGTTGCTAGTTCTGTCGAATCAGATAGGGTGCATTTTGGGAATAGGTGGTAGTGTGATCAAGCTAATGGCGTCTGAAAGTGGGGCACAAATTCGGATCCTTCCTAGAGATAAACTTCCATTGTGTGCACCAGCTTCCGATGAGTTAGTTCAGATTACTGGTGAAGTTGATGCTGTCAGGAAAGCTCTAGATTCCGTTACTCAGCAGCTTTTGGATAATCTGCCTCGTGCTAGTGCCTCTTCCCTTCTTAACTCCACAGGGCCGTCATCTCAACCTTCTCCAAGACCAGAAGTAACTCCGCCACCGGAGCGGTCTCAAGGAACACCTTATAGCAATCAGGCTGCTGATATTGTGGATAACCATTCTGCTGCTCATCCACTGATCCCAAAGGTTCATGCTTCTGGCATCCCTGGTAGGATGAAGTCTTCACAGGAAGTCCTAACTTTTCGCTTATTGTGCCACGAAGAGAGAGTAGGAGGTGTAATTGGAAAGGGTGGAACGATTATAAGGACACTTAAGCAAGAAACAGGCTGTGAAATCAAGGTTATGGATGGTGTCTCTGATTCAGAGGACCGCGTTATTATTTTATCTGGTCCGGCGCACCCAGATGATAGGATATCACCTCTGCAAGATGCCGTCCTTCGTGTGCATGATAGGATAGTCAGGGCAGTACCTATTACCAAGGAACAGCCCATGACAGCCAGGCTTCTTATTTCCTCCAATCAAATTGGTTGTCTCCTTGGCAAGGGTGGTGCCATCATAGCTGAAATGAGAAAGTCATCTCGCGCTCATATACGTATATTGGGGAAGGATCAAATTCCCAAATGTGTTTCAGATGATGAAGAAGTTGTTCAGATGAATGGAGAACTTGAAGCTGTGAATGATGCTCTTCTGCAGATCACCAGTAGGTTGCAGCATCATTTCTTTCGCGATGTATTTCCTTCTTTAAGCTATCCTCCAAATCCTGCATTTTCGGATCAACCTCCTTTTCGATCATATTTGAGGAGGGACTTCTCACCTCCAAGAATGCATTCTAACTTCGGCCCATCATTTCACAAGTTTGATACTGTTGGTGGTATGGCTCCACATGGTGGTTTCCATCCTCTGCATTTATCAGAAAGAAAACCTTGGGGTTCTCAGGGACTTCTGGAGGGTGGTGGTCCAATTGGTTTGCCAAACTTTGCTGGAGCTCCACAAAGAAGGATTCCTGGGTTTGGAGGAAGCCAACCAGCAATAATTACCAGTACAACTATTGAAGCTGTTGTTCCTAGTTCCCTTATTCCTATAATAAATGGAGAAGATGGTGAATGCTTGAAACAAATCCGTCAGATTTCGGATGCAAAAATTACAATTACTGAGCCCCTACCTGGAGCAAAGGAAACTTTGATTATAATATCAGGAACACCTGAACAAACTCATGCTGCACAGAGTCTTATTCAAGCATTTGTGATGAGTGAAACCGACTCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

648

Amino Acids

69.84

Weight (kDa)

5.75

Isoelectric Point (pI)

49.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	43 - 93	3.8e-08	KH domain
KH_1	PF00013	158 - 224	1.1e-11	KH domain
KH_1	PF00013	306 - 358	2.6e-12	KH domain
KH_1	PF00013	391 - 459	2.6e-12	KH domain
KH_1	PF00013	576 - 638	3e-10	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010574)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g33520 FvH4_5g33520
malus_domestica	MD08G1211200.v1.1
prunus_persica	Prupe.1G543200_v2.0.a1 Prupe.1G543200_v2.0.a1 Prupe.1G543200_v2.0.a1
pyrus_communis	pycom08g18200 pycom15g35520
rosa_chinensis	RchiOBHm_Chr7g0232321
rosa_laevigata	RLG00000001357
rosa_multiflora	Rmu_co8258439.1_g000001 Rmu_sc0004136.1_g000004 Rmu_sc0034864.1_g000001
rosa_roxburghii	Rroxscaffold_3G00228470
rosa_rugosa	Rorug07G0272500 Rorug07G0272600
rosa_samantha	Rh7AG426500 Rh7BG400200 Rh7CG446200 Rh7DG417700
rosa_wichuraiana	Rw7G035360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	980, 1865
AccB1I	GGYRCC	1 cut(s)	1226
AccB7I	CCANNNNNTGG	1 cut(s)	1565
AccBSI	CCGCTC	1 cut(s)	784
AccII	CGCG	4 cut(s)	351, 1050, 1260, 1404
AciI	CCGC	5 cut(s)	32, 349, 773, 784, 1048
AclWI	GGATC	5 cut(s)	565, 578, 850, 1293, 1458
AcsI	RAATTY	2 cut(s)	564, 1290
AcyI	GRCGYC	1 cut(s)	545
AdeI	CACNNNGTG	1 cut(s)	1565
AfaI	GTAC	3 cut(s)	240, 1146, 1720
AfiI	CCNNNNNNNGG	4 cut(s)	1219, 1565, 1688, 1841
AflII	CTTAAG	1 cut(s)	989
AgsI	TTSAA	6 cut(s)	302, 413, 1346, 1730, 1789, 1913
AjnI	CCWGG	5 cut(s)	36, 883, 1175, 1681, 1840
AjuI	GAANNNNNNNTTGG	2 cut(s)	1489, 1521
AluBI	AGCT	9 cut(s)	538, 608, 659, 682, 1238, 1349, 1425, 1664, 1733
AluI	AGCT	9 cut(s)	538, 608, 659, 682, 1238, 1349, 1425, 1664, 1733
Alw21I	GWGCWC	2 cut(s)	604, 1666
Alw26I	GTCTC	6 cut(s)	22, 200, 419, 792, 1036, 1214
Alw44I	GTGCAC	1 cut(s)	600
AlwI	GGATC	5 cut(s)	565, 578, 850, 1293, 1458
Ama87I	CYCGRG	1 cut(s)	143
AoxI	GGCC	2 cut(s)	734, 1516
ApaLI	GTGCAC	1 cut(s)	600
ApeKI	GCWGC	6 cut(s)	246, 679, 815, 842, 1387, 1895
ApoI	RAATTY	2 cut(s)	564, 1290
ArsI	GACNNNNNNTTYG	4 cut(s)	454, 486, 1192, 1224
Asp700I	GAANNNNTTC	2 cut(s)	1323, 1504
AspLEI	GCGC	2 cut(s)	1075, 1262
AspS9I	GGNCC	6 cut(s)	43, 734, 1045, 1067, 1517, 1634
AsuC2I	CCSGG	1 cut(s)	243
AsuHPI	GGTGA	8 cut(s)	182, 226, 232, 647, 1086, 1366, 1482, 1790
AvaI	CYCGRG	1 cut(s)	143
AvaII	GGWCC	4 cut(s)	43, 1045, 1067, 1634
BaeGI	GKGCMC	2 cut(s)	562, 604
BamHI	GGATCC	1 cut(s)	570
BanI	GGYRCC	1 cut(s)	1226
BanII	GRGCYC	2 cut(s)	1666, 1836
BauI	CACGAG	1 cut(s)	699
BbsI	GAAGAC	1 cut(s)	891
Bbv12I	GWGCWC	2 cut(s)	604, 1666
BbvI	GCAGC	6 cut(s)	233, 691, 802, 829, 1399, 1882
BccI	CCATC	9 cut(s)	272, 425, 434, 440, 1019, 1238, 1528, 1581, 1769
BceAI	ACGGC	2 cut(s)	721, 1094
BciT130I	CCWGG	5 cut(s)	38, 885, 1177, 1683, 1842
BclI	TGATCA	2 cut(s)	91, 531
BcnI	CCSGG	1 cut(s)	243
BcoDI	GTCTC	6 cut(s)	22, 200, 419, 792, 1036, 1214
BfaI	CTAG	5 cut(s)	482, 579, 662, 705, 1743
BfmI	CTRYAG	1 cut(s)	1367
BfrI	CTTAAG	1 cut(s)	989
BisI	GCNGC	7 cut(s)	247, 349, 680, 816, 843, 1388, 1896
BlsI	GCNGC	7 cut(s)	248, 350, 681, 817, 844, 1389, 1897
Bme1390I	CCNGG	6 cut(s)	38, 243, 885, 1177, 1683, 1842
Bme18I	GGWCC	4 cut(s)	43, 1045, 1067, 1634
BmeT110I	CYCGRG	1 cut(s)	143
BmgT120I	GGNCC	6 cut(s)	43, 734, 1045, 1067, 1517, 1634
BmiI	GGNNCC	5 cut(s)	45, 54, 572, 1228, 1557
BmrFI	CCNGG	6 cut(s)	38, 243, 885, 1177, 1683, 1842
BmsI	GCATC	7 cut(s)	377, 634, 888, 1096, 1348, 1399, 1801
BpiI	GAAGAC	1 cut(s)	891
BpmI	CTGGAG	3 cut(s)	1643, 1680, 1863
BpuEI	CTTGAG	1 cut(s)	774
BpuMI	CCSGG	1 cut(s)	243
BsaAI	YACGTR	1 cut(s)	1271
BsaBI	GATNNNNATC	1 cut(s)	90
BsaHI	GRCGYC	1 cut(s)	545
BsaI	GGTCTC	2 cut(s)	22, 792
BsaJI	CCNNGG	5 cut(s)	883, 1155, 1213, 1601, 1682
BsaWI	WCCGGW	1 cut(s)	778
Bsc4I	CCNNNNNNNGG	4 cut(s)	1219, 1565, 1688, 1841
Bse1I	ACTGG	4 cut(s)	172, 637, 1377, 1716
Bse3DI	GCAATG	1 cut(s)	124
Bse8I	GATNNNNATC	1 cut(s)	90
BseBI	CCWGG	5 cut(s)	38, 885, 1177, 1683, 1842
BseDI	CCNNGG	5 cut(s)	883, 1155, 1213, 1601, 1682
BseGI	GGATG	9 cut(s)	283, 368, 445, 847, 879, 897, 1030, 1573, 1816
BseJI	GATNNNNATC	1 cut(s)	90
BseLI	CCNNNNNNNGG	4 cut(s)	1219, 1565, 1688, 1841
BseMI	GCAATG	1 cut(s)	124
BseMII	CTCAG	3 cut(s)	689, 1625, 1821
BseNI	ACTGG	4 cut(s)	172, 637, 1377, 1716
BseRI	GAGGAG	1 cut(s)	1492
BseSI	GKGCMC	2 cut(s)	562, 604
BseXI	GCAGC	6 cut(s)	233, 691, 802, 829, 1399, 1882
BsgI	GTGCAG	1 cut(s)	1881
Bsh1236I	CGCG	4 cut(s)	351, 1050, 1260, 1404
BshFI	GGCC	2 cut(s)	736, 1518
BshNI	GGYRCC	1 cut(s)	1226
BsiHKAI	GWGCWC	2 cut(s)	604, 1666
BsiHKCI	CYCGRG	1 cut(s)	143
BsiSI	CCGG	3 cut(s)	243, 779, 1070
BslFI	GGGAC	2 cut(s)	1496, 1629
BslI	CCNNNNNNNGG	4 cut(s)	1219, 1565, 1688, 1841
BsmAI	GTCTC	6 cut(s)	22, 200, 419, 792, 1036, 1214
BsmFI	GGGAC	2 cut(s)	1496, 1629
BsmI	GAATGC	3 cut(s)	1504, 1506, 1787
BsnI	GGCC	2 cut(s)	736, 1518
Bso31I	GGTCTC	2 cut(s)	22, 792
BsoBI	CYCGRG	1 cut(s)	143
Bsp1286I	GDGCHC	4 cut(s)	562, 604, 1666, 1836
Bsp143I	GATC	8 cut(s)	91, 531, 570, 855, 1285, 1371, 1450, 1466
Bsp68I	TCGCGA	1 cut(s)	1404
BspACI	CCGC	5 cut(s)	32, 349, 773, 784, 1048
BspANI	GGCC	2 cut(s)	736, 1518
BspCNI	CTCAG	3 cut(s)	688, 1624, 1822
BspFNI	CGCG	4 cut(s)	351, 1050, 1260, 1404
BspLI	GGNNCC	5 cut(s)	45, 54, 572, 1228, 1557
BspMAI	CTGCAG	1 cut(s)	1371
BspPI	GGATC	5 cut(s)	565, 578, 850, 1293, 1458
BspQI	GCTCTTC	1 cut(s)	1368
BspT107I	GGYRCC	1 cut(s)	1226
BspTI	CTTAAG	1 cut(s)	989
BspTNI	GGTCTC	2 cut(s)	22, 792
BsrBI	CCGCTC	1 cut(s)	784
BsrDI	GCAATG	1 cut(s)	124
BsrI	ACTGG	4 cut(s)	172, 637, 1377, 1716
BssECI	CCNNGG	5 cut(s)	883, 1155, 1213, 1601, 1682
BssMI	GATC	8 cut(s)	91, 531, 570, 855, 1285, 1371, 1450, 1466
BssNI	GRCGYC	1 cut(s)	545
BssSI	CACGAG	1 cut(s)	699
BssT1I	CCWWGG	3 cut(s)	1155, 1213, 1601
Bst2BI	CACGAG	1 cut(s)	699
Bst2UI	CCWGG	5 cut(s)	38, 885, 1177, 1683, 1842
Bst4CI	ACNGT	1 cut(s)	1543
Bst6I	CTCTTC	4 cut(s)	306, 718, 933, 1368
BstACI	GRCGYC	1 cut(s)	545
BstAFI	CTTAAG	1 cut(s)	989
BstBAI	YACGTR	1 cut(s)	1271
BstDEI	CTNAG	4 cut(s)	24, 675, 1611, 1830
BstENI	CCTNNNNNAGG	1 cut(s)	1217
BstF5I	GGATG	9 cut(s)	283, 368, 445, 847, 879, 897, 1030, 1573, 1816
BstFNI	CGCG	4 cut(s)	351, 1050, 1260, 1404
BstHHI	GCGC	2 cut(s)	1075, 1262
BstKTI	GATC	8 cut(s)	94, 534, 573, 858, 1288, 1374, 1453, 1469
BstMAI	GTCTC	6 cut(s)	22, 200, 419, 792, 1036, 1214
BstMBI	GATC	8 cut(s)	91, 531, 570, 855, 1285, 1371, 1450, 1466
BstMWI	GCNNNNNNNGC	3 cut(s)	781, 930, 1235
BstNI	CCWGG	5 cut(s)	38, 885, 1177, 1683, 1842
BstSCI	CCNGG	6 cut(s)	36, 241, 883, 1175, 1681, 1840
BstSFI	CTRYAG	1 cut(s)	1367
BstSLI	GKGCMC	2 cut(s)	562, 604
BstSNI	TACGTA	1 cut(s)	1271
BstUI	CGCG	4 cut(s)	351, 1050, 1260, 1404
BstV1I	GCAGC	6 cut(s)	233, 691, 802, 829, 1399, 1882
BstV2I	GAAGAC	1 cut(s)	891
BstX2I	RGATCY	1 cut(s)	570
BstYI	RGATCY	1 cut(s)	570
BsuRI	GGCC	2 cut(s)	736, 1518
BtgZI	GCGATG	1 cut(s)	1419
BtsCI	GGATG	9 cut(s)	283, 368, 445, 847, 879, 897, 1030, 1573, 1816
BtsIMutI	CAGTG	1 cut(s)	851
BtuMI	TCGCGA	1 cut(s)	1404
CfoI	GCGC	2 cut(s)	1075, 1262
Cfr13I	GGNCC	6 cut(s)	43, 734, 1045, 1067, 1517, 1634
CseI	GACGC	1 cut(s)	534
Csp6I	GTAC	3 cut(s)	239, 1145, 1719
CviAII	CATG	5 cut(s)	869, 1124, 1168, 1562, 1892
CviQI	GTAC	3 cut(s)	239, 1145, 1719
DdeI	CTNAG	4 cut(s)	24, 675, 1611, 1830
DpnI	GATC	8 cut(s)	93, 533, 572, 857, 1287, 1373, 1452, 1468
DpnII	GATC	8 cut(s)	91, 531, 570, 855, 1285, 1371, 1450, 1466
DraIII	CACNNNGTG	1 cut(s)	1565
Eam1104I	CTCTTC	4 cut(s)	306, 718, 933, 1368
EarI	CTCTTC	4 cut(s)	306, 718, 933, 1368
EciI	GGCGGA	1 cut(s)	762
Ecl136II	GAGCTC	1 cut(s)	1664
Eco105I	TACGTA	1 cut(s)	1271
Eco130I	CCWWGG	3 cut(s)	1155, 1213, 1601
Eco24I	GRGCYC	2 cut(s)	1666, 1836
Eco31I	GGTCTC	2 cut(s)	22, 792
Eco32I	GATATC	1 cut(s)	1092
Eco47I	GGWCC	4 cut(s)	43, 1045, 1067, 1634
Eco53kI	GAGCTC	1 cut(s)	1664
Eco88I	CYCGRG	1 cut(s)	143
EcoICRI	GAGCTC	1 cut(s)	1664
EcoNI	CCTNNNNNAGG	1 cut(s)	1217
EcoO109I	RGGNCCY	1 cut(s)	43
EcoRII	CCWGG	5 cut(s)	36, 883, 1175, 1681, 1840
EcoRV	GATATC	1 cut(s)	1092
EcoT14I	CCWWGG	3 cut(s)	1155, 1213, 1601
EcoT22I	ATGCAT	1 cut(s)	1506
EcoT38I	GRGCYC	2 cut(s)	1666, 1836
ErhI	CCWWGG	3 cut(s)	1155, 1213, 1601
FaeI	CATG	5 cut(s)	872, 1127, 1171, 1565, 1895
FalI	AAGNNNNNCTT	2 cut(s)	1585, 1617
FaqI	GGGAC	2 cut(s)	1496, 1629
FatI	CATG	5 cut(s)	868, 1123, 1167, 1561, 1891
FbaI	TGATCA	2 cut(s)	91, 531
Fnu4HI	GCNGC	7 cut(s)	247, 349, 680, 816, 843, 1388, 1896
FokI	GGATG	9 cut(s)	290, 355, 452, 834, 866, 904, 1037, 1560, 1823
FriOI	GRGCYC	2 cut(s)	1666, 1836
Fsp4HI	GCNGC	7 cut(s)	247, 349, 680, 816, 843, 1388, 1896
FspBI	CTAG	5 cut(s)	482, 579, 662, 705, 1743
GlaI	GCGC	2 cut(s)	1074, 1261
GluI	GCNGC	7 cut(s)	247, 349, 680, 816, 843, 1388, 1896
GsuI	CTGGAG	3 cut(s)	1643, 1680, 1863
HaeIII	GGCC	2 cut(s)	736, 1518
HapII	CCGG	3 cut(s)	243, 779, 1070
HgaI	GACGC	1 cut(s)	534
HhaI	GCGC	2 cut(s)	1075, 1262
Hin1I	GRCGYC	1 cut(s)	545
Hin1II	CATG	5 cut(s)	872, 1127, 1171, 1565, 1895
Hin6I	GCGC	2 cut(s)	1073, 1260
HinP1I	GCGC	2 cut(s)	1073, 1260
HinfI	GANTC	9 cut(s)	146, 208, 338, 493, 665, 1037, 1678, 1903, 1937
HpaII	CCGG	3 cut(s)	243, 779, 1070
HphI	GGTGA	8 cut(s)	182, 226, 232, 647, 1086, 1366, 1482, 1790
Hpy166II	GTNNAC	2 cut(s)	239, 602
Hpy188III	TCNNGA	8 cut(s)	203, 376, 652, 662, 1403, 1622, 1872, 1944
Hpy8I	GTNNAC	2 cut(s)	239, 602
Hpy99I	CGWCG	1 cut(s)	254
HpyCH4III	ACNGT	1 cut(s)	1543
HpyCH4IV	ACGT	1 cut(s)	1270
HpyF10VI	GCNNNNNNNGC	3 cut(s)	781, 930, 1235
HpyF3I	CTNAG	4 cut(s)	24, 675, 1611, 1830
HpySE526I	ACGT	1 cut(s)	1270
Hsp92I	GRCGYC	1 cut(s)	545
Hsp92II	CATG	5 cut(s)	872, 1127, 1171, 1565, 1895
HspAI	GCGC	2 cut(s)	1073, 1260
Ksp22I	TGATCA	2 cut(s)	91, 531
Kzo9I	GATC	8 cut(s)	91, 531, 570, 855, 1285, 1371, 1450, 1466
LguI	GCTCTTC	1 cut(s)	1368
LmnI	GCTCC	7 cut(s)	13, 52, 781, 1561, 1661, 1669, 1844
Lsp1109I	GCAGC	6 cut(s)	233, 691, 802, 829, 1399, 1882
LweI	GCATC	7 cut(s)	377, 634, 888, 1096, 1348, 1399, 1801
MaeI	CTAG	5 cut(s)	482, 579, 662, 705, 1743
MaeII	ACGT	1 cut(s)	1270
MaeIII	GTNAC	4 cut(s)	72, 163, 670, 766
MalI	GATC	8 cut(s)	93, 533, 572, 857, 1287, 1373, 1452, 1468
MbiI	CCGCTC	1 cut(s)	784
MboI	GATC	8 cut(s)	91, 531, 570, 855, 1285, 1371, 1450, 1466
MboII	GAAGA	9 cut(s)	323, 332, 705, 891, 950, 1328, 1355, 1784, 1932
MfeI	CAATTG	2 cut(s)	465, 1638
MflI	RGATCY	1 cut(s)	570
MhlI	GDGCHC	4 cut(s)	562, 604, 1666, 1836
MlyI	GAGTC	4 cut(s)	155, 202, 1912, 1931
Mph1103I	ATGCAT	1 cut(s)	1506
MroXI	GAANNNNTTC	2 cut(s)	1323, 1504
MseI	TTAA	3 cut(s)	723, 990, 1421
MslI	CAYNNNNRTG	1 cut(s)	1080
MspCI	CTTAAG	1 cut(s)	989
MspI	CCGG	3 cut(s)	243, 779, 1070
MspR9I	CCNGG	6 cut(s)	38, 243, 885, 1177, 1683, 1842
MunI	CAATTG	2 cut(s)	465, 1638
Mva1269I	GAATGC	3 cut(s)	1504, 1506, 1787
MvaI	CCWGG	5 cut(s)	38, 885, 1177, 1683, 1842
MvnI	CGCG	4 cut(s)	351, 1050, 1260, 1404
MwoI	GCNNNNNNNGC	3 cut(s)	781, 930, 1235
NciI	CCSGG	1 cut(s)	243
NdeII	GATC	8 cut(s)	91, 531, 570, 855, 1285, 1371, 1450, 1466
NlaIII	CATG	5 cut(s)	872, 1127, 1171, 1565, 1895
NlaIV	GGNNCC	5 cut(s)	45, 54, 572, 1228, 1557
NruI	TCGCGA	1 cut(s)	1404
NsiI	ATGCAT	1 cut(s)	1506
PciSI	GCTCTTC	1 cut(s)	1368
PctI	GAATGC	3 cut(s)	1504, 1506, 1787
PdmI	GAANNNNTTC	2 cut(s)	1323, 1504
PfeI	GAWTC	5 cut(s)	338, 493, 665, 1037, 1678
PflMI	CCANNNNNTGG	1 cut(s)	1565
PkrI	GCNGC	7 cut(s)	248, 350, 681, 817, 844, 1389, 1897
PleI	GAGTC	4 cut(s)	154, 202, 1911, 1931
PpsI	GAGTC	4 cut(s)	154, 202, 1911, 1931
Ppu21I	YACGTR	1 cut(s)	1271
PpuMI	RGGWCCY	1 cut(s)	43
PsiI	TTATAA	2 cut(s)	980, 1865
Psp124BI	GAGCTC	1 cut(s)	1666
Psp5II	RGGWCCY	1 cut(s)	43
Psp6I	CCWGG	5 cut(s)	36, 883, 1175, 1681, 1840
PspGI	CCWGG	5 cut(s)	36, 883, 1175, 1681, 1840
PspN4I	GGNNCC	5 cut(s)	45, 54, 572, 1228, 1557
PspPI	GGNCC	6 cut(s)	43, 734, 1045, 1067, 1517, 1634
PspPPI	RGGWCCY	1 cut(s)	43
PstI	CTGCAG	1 cut(s)	1371
PsuI	RGATCY	1 cut(s)	570
RruI	TCGCGA	1 cut(s)	1404
RsaI	GTAC	3 cut(s)	240, 1146, 1720
RsaNI	GTAC	3 cut(s)	239, 1145, 1719
RseI	CAYNNNNRTG	1 cut(s)	1080
SacI	GAGCTC	1 cut(s)	1666
SapI	GCTCTTC	1 cut(s)	1368
SaqAI	TTAA	3 cut(s)	723, 990, 1421
SatI	GCNGC	7 cut(s)	247, 349, 680, 816, 843, 1388, 1896
Sau3AI	GATC	8 cut(s)	91, 531, 570, 855, 1285, 1371, 1450, 1466
Sau96I	GGNCC	6 cut(s)	43, 734, 1045, 1067, 1517, 1634
SchI	GAGTC	4 cut(s)	155, 202, 1912, 1931
ScrFI	CCNGG	6 cut(s)	38, 243, 885, 1177, 1683, 1842
SduI	GDGCHC	4 cut(s)	562, 604, 1666, 1836
SfaNI	GCATC	7 cut(s)	377, 634, 888, 1096, 1348, 1399, 1801
SfcI	CTRYAG	1 cut(s)	1367
SinI	GGWCC	4 cut(s)	43, 1045, 1067, 1634
SmiMI	CAYNNNNRTG	1 cut(s)	1080
SmlI	CTYRAG	2 cut(s)	789, 989
SmoI	CTYRAG	2 cut(s)	789, 989
SnaBI	TACGTA	1 cut(s)	1271
SsiI	CCGC	5 cut(s)	32, 349, 773, 784, 1048
SspMI	CTAG	5 cut(s)	482, 579, 662, 705, 1743
SstI	GAGCTC	1 cut(s)	1666
StyD4I	CCNGG	6 cut(s)	36, 241, 883, 1175, 1681, 1840
StyI	CCWWGG	3 cut(s)	1155, 1213, 1601
TaaI	ACNGT	1 cut(s)	1543
TaiI	ACGT	1 cut(s)	1273
TaqI	TCGA	4 cut(s)	149, 329, 491, 1465
TatI	WGTACW	1 cut(s)	1718
TauI	GCSGC	1 cut(s)	351
TfiI	GAWTC	5 cut(s)	338, 493, 665, 1037, 1678
Tru1I	TTAA	3 cut(s)	723, 990, 1421
Tru9I	TTAA	3 cut(s)	723, 990, 1421
TscAI	CASTG	1 cut(s)	858
TseI	GCWGC	6 cut(s)	246, 679, 815, 842, 1387, 1895
TspDTI	ATGAA	4 cut(s)	857, 908, 1329, 1346
TspGWI	ACGGA	3 cut(s)	361, 658, 1787
TspRI	CASTG	1 cut(s)	858
Van91I	CCANNNNNTGG	1 cut(s)	1565
Vha464I	CTTAAG	1 cut(s)	989
VneI	GTGCAC	1 cut(s)	600
VpaK11BI	GGWCC	4 cut(s)	43, 1045, 1067, 1634
XagI	CCTNNNNNAGG	1 cut(s)	1217
XapI	RAATTY	2 cut(s)	564, 1290
XbaI	TCTAGA	1 cut(s)	661
XmnI	GAANNNNTTC	2 cut(s)	1323, 1504
XspI	CTAG	5 cut(s)	482, 579, 662, 705, 1743
Zsp2I	ATGCAT	1 cut(s)	1506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.