Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0010574

Physical Location & Seq

Genomic Coordinates Forward (+)

57249106 .. 57257048

Gene Structure 7943 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG426500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGTCTGCTCCATTGACACCTTCTAAGAGACCGCACCAGGAGGACCCTTTGGAGCCGAATGGGAAAGGGAAGTTACAAAAGTCTGATGATGATCGACCTACTAATGCTTCCTCTGGCAATGCTGTTTTTCGGGTTGTTTGCCCCGAGTCGAAAATTGGTTGTGTTACTGGTGAAGGTGGCTCTGGCATATCCGAGATATATCAGGAGACTCTGGTGAAGGTGAGAGTTGAGGAAAGTGTACCTGGCTGCGACGAAAGAGTTATTGTCATTGGTTGGGATGGAGAGAATAGAGTTGATAGTGAGCAAAGCAAGGAGAATGGGGTGGAAGAGACTAGTGTAGTTGAAAAGAAGGAAGAGAAGGAAGATGTTTCGATTGATGATTCAGAACGCCACGAAAAAGTAAGTCCTGCATCCGTCAAGAAGGCTCTGCAACTTGTGTTTGAGAGAATGGTTGAAGGGGAAAGAGAGACTGATGGAGGGGATGGAGATGGTAAGAAGTCATTGACAATTGTTTTGAGGTTGCTAGTTCTGTCGAATCAAATAGGGTGCATTTTGGGAATAGGTGGTAGTGTGATCAAGCTAATGGCGTCTGAAAGTGGGGCACAAATTCGGATCCTTCCTAGAGATAAACTTCCATTGTGTGCACCAGCTTCCGATGAGTTAGTTCAGATTACTGGTGAAGTTGATGCTGTCAGGAAAGCTCTAGATTCCGTTACTCAGCAGCTTTTGGATAATCTGCCTCGTGCTAGTGCCTCTTCCCTTCTTAACTCCACAGGGCCGTCATCTCAACCTTCTCCAAGACCAGAAGTAACTCTGCCACCGGAGCGGTCTCAAGGAACACCTTATAGCAATCAGGCTGCTGATATTGTGGATAACCATTCTGCTGCTCATCCACTGATCCCAAAGGTTCATGCTTCTGGCATCCCTGGTAGGATGAAGTCTTCACAGGAAGTCCTAACTTTTCGCTTATTGTGCCACGAAGAGAGAGTAGGAGGTGTAATTGGAAAGGGTGGAACGATTATAAGGACACTTAAGCAAGAAACAGGCTGTGAAATCAAGGTTATGGATGGTGTCTCCGATTCAGAGGACCGCGTTATTATTTTATCTGGTCCGGCGCACCCAGATGATAGGATATCACCTTTGCAAGATGCCGTCCTTCGTGTGCATGATAGGATAGTCAGGGCAGTACCTATTACCAAGGAACAGCCCATGACAGCCAGGCTTCTTATTTCCTCCAATCAAATTGGTTGTCTCCTTGGCAAGGGTGGTGCCATCATAGCTGAAATGAGAAAGTCATCTCGCGCTCATATACGTATATTGGGGAAGGATCAAATTCCCAAATGTGTTTCAGATGATGAAGAAGTTGTTCAGATGAATGGAGAACTTGAAGCTGTGAATGATGCTCTTCTGCAGATCACCAGTAGGTTGCAGCATCATTTCTTTCGCGATGTATTTCCTTCTTTAAGCTATCCTCCAAATCCTGCATTTTCGGATCAACCTCCTTTTCGATCATATTTGAGGAGGGACTTCTCACCTCCAAGAATGCATTCTAACTTTGGCCCATCATTTCACAAGTTTGATACTGTTGGTGGTCTGGCTCCACATGGTGGTTTCCATCCTCTGCATTTATCAGAAAGAAAACCTTGGGGTTCTCAGGGACTTCTGGAGGGTGGTGGTCCAATTGGTTTGCCAAACTTTGCTGGAGCTCCACAAAGAAGGATTCCTGGGTTTGGAGGAAGCCAACCAGCAATAATTACCAGTACAACTATTGAAGCTGTTGTTCCTAGTTCTCTTATTCCTATAATAAATGGAGAAGATGGTGAATGCTTGAAACAAATCCGTCAGATTTCGGATGCAAAAATTACAATTACTGAGCCCCTACCTGGAGCAAAGGAAACTTTGATTATAATATCAGGAACACCTGAACAAACTCATGCTGCACAGAGTCTTATTCAAGCATTTGTGATGAGTGAAACCGACTCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

662

Amino Acids

71.33

Weight (kDa)

5.62

Isoelectric Point (pI)

47.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	43 - 91	2.4e-08	KH domain
KH_1	PF00013	172 - 238	1.1e-11	KH domain
KH_1	PF00013	320 - 372	2.7e-12	KH domain
KH_1	PF00013	405 - 473	2.7e-12	KH domain
KH_1	PF00013	590 - 652	3.1e-10	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010574)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g33520 FvH4_5g33520
malus_domestica	MD08G1211200.v1.1
prunus_persica	Prupe.1G543200_v2.0.a1 Prupe.1G543200_v2.0.a1 Prupe.1G543200_v2.0.a1
pyrus_communis	pycom08g18200 pycom15g35520
rosa_chinensis	RchiOBHm_Chr7g0232321
rosa_laevigata	RLG00000001357
rosa_multiflora	Rmu_co8258439.1_g000001 Rmu_sc0004136.1_g000004 Rmu_sc0034864.1_g000001
rosa_roxburghii	Rroxscaffold_3G00228470
rosa_rugosa	Rorug07G0272500 Rorug07G0272600
rosa_samantha	Rh7AG426500 Rh7BG400200 Rh7CG446200 Rh7DG417700
rosa_wichuraiana	Rw7G035360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1022, 1907
AccB1I	GGYRCC	1 cut(s)	1268
AccB7I	CCANNNNNTGG	1 cut(s)	1607
AccBSI	CCGCTC	1 cut(s)	826
AccII	CGCG	3 cut(s)	1092, 1302, 1446
AciI	CCGC	3 cut(s)	32, 826, 1090
AclWI	GGATC	5 cut(s)	607, 620, 892, 1335, 1500
AcsI	RAATTY	2 cut(s)	606, 1332
AcyI	GRCGYC	1 cut(s)	587
AdeI	CACNNNGTG	1 cut(s)	1607
AfaI	GTAC	3 cut(s)	240, 1188, 1762
AfiI	CCNNNNNNNGG	4 cut(s)	1261, 1607, 1730, 1883
AflII	CTTAAG	1 cut(s)	1031
AgsI	TTSAA	6 cut(s)	344, 455, 1388, 1772, 1831, 1955
AhlI	ACTAGT	1 cut(s)	332
AjnI	CCWGG	6 cut(s)	36, 241, 925, 1217, 1723, 1882
AjuI	GAANNNNNNNTTGG	2 cut(s)	1531, 1563
AluBI	AGCT	9 cut(s)	580, 650, 701, 724, 1280, 1391, 1467, 1706, 1775
AluI	AGCT	9 cut(s)	580, 650, 701, 724, 1280, 1391, 1467, 1706, 1775
Alw21I	GWGCWC	2 cut(s)	646, 1708
Alw26I	GTCTC	7 cut(s)	22, 200, 323, 461, 834, 1078, 1256
Alw44I	GTGCAC	1 cut(s)	642
AlwI	GGATC	5 cut(s)	607, 620, 892, 1335, 1500
Ama87I	CYCGRG	1 cut(s)	143
AoxI	GGCC	2 cut(s)	776, 1558
ApaLI	GTGCAC	1 cut(s)	642
ApeKI	GCWGC	6 cut(s)	246, 721, 857, 884, 1429, 1937
ApoI	RAATTY	2 cut(s)	606, 1332
ArsI	GACNNNNNNTTYG	4 cut(s)	496, 528, 1234, 1266
Asp700I	GAANNNNTTC	2 cut(s)	1365, 1546
AspLEI	GCGC	2 cut(s)	1117, 1304
AspS9I	GGNCC	6 cut(s)	43, 776, 1087, 1109, 1559, 1676
AsuHPI	GGTGA	8 cut(s)	182, 226, 232, 689, 1128, 1408, 1524, 1832
AvaI	CYCGRG	1 cut(s)	143
AvaII	GGWCC	4 cut(s)	43, 1087, 1109, 1676
BaeGI	GKGCMC	2 cut(s)	604, 646
BamHI	GGATCC	1 cut(s)	612
BanI	GGYRCC	1 cut(s)	1268
BanII	GRGCYC	2 cut(s)	1708, 1878
BauI	CACGAG	1 cut(s)	741
BbsI	GAAGAC	1 cut(s)	933
Bbv12I	GWGCWC	2 cut(s)	646, 1708
BbvI	GCAGC	6 cut(s)	233, 733, 844, 871, 1441, 1924
BccI	CCATC	9 cut(s)	272, 467, 476, 482, 1061, 1280, 1570, 1623, 1811
BceAI	ACGGC	2 cut(s)	763, 1136
BciT130I	CCWGG	6 cut(s)	38, 243, 927, 1219, 1725, 1884
BclI	TGATCA	1 cut(s)	573
BcoDI	GTCTC	7 cut(s)	22, 200, 323, 461, 834, 1078, 1256
BcuI	ACTAGT	1 cut(s)	332
BfaI	CTAG	6 cut(s)	333, 524, 621, 704, 747, 1785
BfmI	CTRYAG	1 cut(s)	1409
BfrI	CTTAAG	1 cut(s)	1031
BisI	GCNGC	6 cut(s)	247, 722, 858, 885, 1430, 1938
BlsI	GCNGC	6 cut(s)	248, 723, 859, 886, 1431, 1939
Bme1390I	CCNGG	6 cut(s)	38, 243, 927, 1219, 1725, 1884
Bme18I	GGWCC	4 cut(s)	43, 1087, 1109, 1676
BmeT110I	CYCGRG	1 cut(s)	143
BmgT120I	GGNCC	6 cut(s)	43, 776, 1087, 1109, 1559, 1676
BmiI	GGNNCC	5 cut(s)	45, 54, 614, 1270, 1599
BmrFI	CCNGG	6 cut(s)	38, 243, 927, 1219, 1725, 1884
BmsI	GCATC	7 cut(s)	419, 676, 930, 1138, 1390, 1441, 1843
BpiI	GAAGAC	1 cut(s)	933
BpmI	CTGGAG	3 cut(s)	1685, 1722, 1905
BpuEI	CTTGAG	1 cut(s)	816
BsaAI	YACGTR	1 cut(s)	1313
BsaBI	GATNNNNATC	1 cut(s)	90
BsaHI	GRCGYC	1 cut(s)	587
BsaI	GGTCTC	2 cut(s)	22, 834
BsaJI	CCNNGG	5 cut(s)	925, 1197, 1255, 1643, 1724
BsaWI	WCCGGW	1 cut(s)	820
Bsc4I	CCNNNNNNNGG	4 cut(s)	1261, 1607, 1730, 1883
Bse1I	ACTGG	4 cut(s)	172, 679, 1419, 1758
Bse3DI	GCAATG	1 cut(s)	124
Bse8I	GATNNNNATC	1 cut(s)	90
BseBI	CCWGG	6 cut(s)	38, 243, 927, 1219, 1725, 1884
BseDI	CCNNGG	5 cut(s)	925, 1197, 1255, 1643, 1724
BseGI	GGATG	9 cut(s)	283, 410, 487, 889, 921, 939, 1072, 1615, 1858
BseJI	GATNNNNATC	1 cut(s)	90
BseLI	CCNNNNNNNGG	4 cut(s)	1261, 1607, 1730, 1883
BseMI	GCAATG	1 cut(s)	124
BseMII	CTCAG	3 cut(s)	731, 1667, 1863
BseNI	ACTGG	4 cut(s)	172, 679, 1419, 1758
BseRI	GAGGAG	1 cut(s)	1534
BseSI	GKGCMC	2 cut(s)	604, 646
BseXI	GCAGC	6 cut(s)	233, 733, 844, 871, 1441, 1924
BsgI	GTGCAG	1 cut(s)	1923
Bsh1236I	CGCG	3 cut(s)	1092, 1302, 1446
BshFI	GGCC	2 cut(s)	778, 1560
BshNI	GGYRCC	1 cut(s)	1268
BsiHKAI	GWGCWC	2 cut(s)	646, 1708
BsiHKCI	CYCGRG	1 cut(s)	143
BsiSI	CCGG	2 cut(s)	821, 1112
BslFI	GGGAC	2 cut(s)	1538, 1671
BslI	CCNNNNNNNGG	4 cut(s)	1261, 1607, 1730, 1883
BsmAI	GTCTC	7 cut(s)	22, 200, 323, 461, 834, 1078, 1256
BsmFI	GGGAC	2 cut(s)	1538, 1671
BsmI	GAATGC	3 cut(s)	1546, 1548, 1829
BsnI	GGCC	2 cut(s)	778, 1560
Bso31I	GGTCTC	2 cut(s)	22, 834
BsoBI	CYCGRG	1 cut(s)	143
Bsp1286I	GDGCHC	4 cut(s)	604, 646, 1708, 1878
Bsp143I	GATC	8 cut(s)	91, 573, 612, 897, 1327, 1413, 1492, 1508
Bsp68I	TCGCGA	1 cut(s)	1446
BspACI	CCGC	3 cut(s)	32, 826, 1090
BspANI	GGCC	2 cut(s)	778, 1560
BspCNI	CTCAG	3 cut(s)	730, 1666, 1864
BspFNI	CGCG	3 cut(s)	1092, 1302, 1446
BspLI	GGNNCC	5 cut(s)	45, 54, 614, 1270, 1599
BspMAI	CTGCAG	1 cut(s)	1413
BspPI	GGATC	5 cut(s)	607, 620, 892, 1335, 1500
BspQI	GCTCTTC	1 cut(s)	1410
BspT107I	GGYRCC	1 cut(s)	1268
BspTI	CTTAAG	1 cut(s)	1031
BspTNI	GGTCTC	2 cut(s)	22, 834
BsrBI	CCGCTC	1 cut(s)	826
BsrDI	GCAATG	1 cut(s)	124
BsrI	ACTGG	4 cut(s)	172, 679, 1419, 1758
BssECI	CCNNGG	5 cut(s)	925, 1197, 1255, 1643, 1724
BssMI	GATC	8 cut(s)	91, 573, 612, 897, 1327, 1413, 1492, 1508
BssNI	GRCGYC	1 cut(s)	587
BssSI	CACGAG	1 cut(s)	741
BssT1I	CCWWGG	3 cut(s)	1197, 1255, 1643
Bst2BI	CACGAG	1 cut(s)	741
Bst2UI	CCWGG	6 cut(s)	38, 243, 927, 1219, 1725, 1884
Bst4CI	ACNGT	1 cut(s)	1585
Bst6I	CTCTTC	5 cut(s)	321, 348, 760, 975, 1410
BstACI	GRCGYC	1 cut(s)	587
BstAFI	CTTAAG	1 cut(s)	1031
BstBAI	YACGTR	1 cut(s)	1313
BstDEI	CTNAG	4 cut(s)	24, 717, 1653, 1872
BstENI	CCTNNNNNAGG	1 cut(s)	1259
BstF5I	GGATG	9 cut(s)	283, 410, 487, 889, 921, 939, 1072, 1615, 1858
BstFNI	CGCG	3 cut(s)	1092, 1302, 1446
BstHHI	GCGC	2 cut(s)	1117, 1304
BstKTI	GATC	8 cut(s)	94, 576, 615, 900, 1330, 1416, 1495, 1511
BstMAI	GTCTC	7 cut(s)	22, 200, 323, 461, 834, 1078, 1256
BstMBI	GATC	8 cut(s)	91, 573, 612, 897, 1327, 1413, 1492, 1508
BstMWI	GCNNNNNNNGC	3 cut(s)	823, 972, 1277
BstNI	CCWGG	6 cut(s)	38, 243, 927, 1219, 1725, 1884
BstSCI	CCNGG	6 cut(s)	36, 241, 925, 1217, 1723, 1882
BstSFI	CTRYAG	1 cut(s)	1409
BstSLI	GKGCMC	2 cut(s)	604, 646
BstSNI	TACGTA	1 cut(s)	1313
BstUI	CGCG	3 cut(s)	1092, 1302, 1446
BstV1I	GCAGC	6 cut(s)	233, 733, 844, 871, 1441, 1924
BstV2I	GAAGAC	1 cut(s)	933
BstX2I	RGATCY	1 cut(s)	612
BstYI	RGATCY	1 cut(s)	612
BsuRI	GGCC	2 cut(s)	778, 1560
BtgZI	GCGATG	1 cut(s)	1461
BtsCI	GGATG	9 cut(s)	283, 410, 487, 889, 921, 939, 1072, 1615, 1858
BtsIMutI	CAGTG	1 cut(s)	893
BtuMI	TCGCGA	1 cut(s)	1446
CfoI	GCGC	2 cut(s)	1117, 1304
Cfr13I	GGNCC	6 cut(s)	43, 776, 1087, 1109, 1559, 1676
CseI	GACGC	1 cut(s)	576
Csp6I	GTAC	3 cut(s)	239, 1187, 1761
CviAII	CATG	5 cut(s)	911, 1166, 1210, 1604, 1934
CviQI	GTAC	3 cut(s)	239, 1187, 1761
DdeI	CTNAG	4 cut(s)	24, 717, 1653, 1872
DpnI	GATC	8 cut(s)	93, 575, 614, 899, 1329, 1415, 1494, 1510
DpnII	GATC	8 cut(s)	91, 573, 612, 897, 1327, 1413, 1492, 1508
DraIII	CACNNNGTG	1 cut(s)	1607
Eam1104I	CTCTTC	5 cut(s)	321, 348, 760, 975, 1410
EarI	CTCTTC	5 cut(s)	321, 348, 760, 975, 1410
Ecl136II	GAGCTC	1 cut(s)	1706
Eco105I	TACGTA	1 cut(s)	1313
Eco130I	CCWWGG	3 cut(s)	1197, 1255, 1643
Eco24I	GRGCYC	2 cut(s)	1708, 1878
Eco31I	GGTCTC	2 cut(s)	22, 834
Eco32I	GATATC	1 cut(s)	1134
Eco47I	GGWCC	4 cut(s)	43, 1087, 1109, 1676
Eco53kI	GAGCTC	1 cut(s)	1706
Eco88I	CYCGRG	1 cut(s)	143
EcoICRI	GAGCTC	1 cut(s)	1706
EcoNI	CCTNNNNNAGG	1 cut(s)	1259
EcoO109I	RGGNCCY	1 cut(s)	43
EcoRII	CCWGG	6 cut(s)	36, 241, 925, 1217, 1723, 1882
EcoRV	GATATC	1 cut(s)	1134
EcoT14I	CCWWGG	3 cut(s)	1197, 1255, 1643
EcoT22I	ATGCAT	1 cut(s)	1548
EcoT38I	GRGCYC	2 cut(s)	1708, 1878
ErhI	CCWWGG	3 cut(s)	1197, 1255, 1643
FaeI	CATG	5 cut(s)	914, 1169, 1213, 1607, 1937
FalI	AAGNNNNNCTT	2 cut(s)	1627, 1659
FaqI	GGGAC	2 cut(s)	1538, 1671
FatI	CATG	5 cut(s)	910, 1165, 1209, 1603, 1933
FbaI	TGATCA	1 cut(s)	573
Fnu4HI	GCNGC	6 cut(s)	247, 722, 858, 885, 1430, 1938
FokI	GGATG	9 cut(s)	290, 397, 494, 876, 908, 946, 1079, 1602, 1865
FriOI	GRGCYC	2 cut(s)	1708, 1878
Fsp4HI	GCNGC	6 cut(s)	247, 722, 858, 885, 1430, 1938
FspBI	CTAG	6 cut(s)	333, 524, 621, 704, 747, 1785
GlaI	GCGC	2 cut(s)	1116, 1303
GluI	GCNGC	6 cut(s)	247, 722, 858, 885, 1430, 1938
GsuI	CTGGAG	3 cut(s)	1685, 1722, 1905
HaeIII	GGCC	2 cut(s)	778, 1560
HapII	CCGG	2 cut(s)	821, 1112
HgaI	GACGC	1 cut(s)	576
HhaI	GCGC	2 cut(s)	1117, 1304
Hin1I	GRCGYC	1 cut(s)	587
Hin1II	CATG	5 cut(s)	914, 1169, 1213, 1607, 1937
Hin6I	GCGC	2 cut(s)	1115, 1302
HinP1I	GCGC	2 cut(s)	1115, 1302
HinfI	GANTC	9 cut(s)	146, 208, 380, 535, 707, 1079, 1720, 1945, 1979
HpaII	CCGG	2 cut(s)	821, 1112
HphI	GGTGA	8 cut(s)	182, 226, 232, 689, 1128, 1408, 1524, 1832
Hpy166II	GTNNAC	2 cut(s)	239, 644
Hpy188III	TCNNGA	8 cut(s)	203, 418, 694, 704, 1445, 1664, 1914, 1986
Hpy8I	GTNNAC	2 cut(s)	239, 644
Hpy99I	CGWCG	1 cut(s)	254
HpyCH4III	ACNGT	1 cut(s)	1585
HpyCH4IV	ACGT	1 cut(s)	1312
HpyF10VI	GCNNNNNNNGC	3 cut(s)	823, 972, 1277
HpyF3I	CTNAG	4 cut(s)	24, 717, 1653, 1872
HpySE526I	ACGT	1 cut(s)	1312
Hsp92I	GRCGYC	1 cut(s)	587
Hsp92II	CATG	5 cut(s)	914, 1169, 1213, 1607, 1937
HspAI	GCGC	2 cut(s)	1115, 1302
Ksp22I	TGATCA	1 cut(s)	573
Kzo9I	GATC	8 cut(s)	91, 573, 612, 897, 1327, 1413, 1492, 1508
LguI	GCTCTTC	1 cut(s)	1410
LmnI	GCTCC	7 cut(s)	13, 52, 823, 1603, 1703, 1711, 1886
Lsp1109I	GCAGC	6 cut(s)	233, 733, 844, 871, 1441, 1924
LweI	GCATC	7 cut(s)	419, 676, 930, 1138, 1390, 1441, 1843
MaeI	CTAG	6 cut(s)	333, 524, 621, 704, 747, 1785
MaeII	ACGT	1 cut(s)	1312
MaeIII	GTNAC	4 cut(s)	72, 163, 712, 808
MalI	GATC	8 cut(s)	93, 575, 614, 899, 1329, 1415, 1494, 1510
MbiI	CCGCTC	1 cut(s)	826
MboI	GATC	8 cut(s)	91, 573, 612, 897, 1327, 1413, 1492, 1508
MfeI	CAATTG	2 cut(s)	507, 1680
MflI	RGATCY	1 cut(s)	612
MhlI	GDGCHC	4 cut(s)	604, 646, 1708, 1878
MlyI	GAGTC	4 cut(s)	155, 202, 1954, 1973
Mph1103I	ATGCAT	1 cut(s)	1548
MroXI	GAANNNNTTC	2 cut(s)	1365, 1546
MseI	TTAA	3 cut(s)	765, 1032, 1463
MslI	CAYNNNNRTG	1 cut(s)	1122
MspCI	CTTAAG	1 cut(s)	1031
MspI	CCGG	2 cut(s)	821, 1112
MspR9I	CCNGG	6 cut(s)	38, 243, 927, 1219, 1725, 1884
MunI	CAATTG	2 cut(s)	507, 1680
Mva1269I	GAATGC	3 cut(s)	1546, 1548, 1829
MvaI	CCWGG	6 cut(s)	38, 243, 927, 1219, 1725, 1884
MvnI	CGCG	3 cut(s)	1092, 1302, 1446
MwoI	GCNNNNNNNGC	3 cut(s)	823, 972, 1277
NdeII	GATC	8 cut(s)	91, 573, 612, 897, 1327, 1413, 1492, 1508
NlaIII	CATG	5 cut(s)	914, 1169, 1213, 1607, 1937
NlaIV	GGNNCC	5 cut(s)	45, 54, 614, 1270, 1599
NruI	TCGCGA	1 cut(s)	1446
NsiI	ATGCAT	1 cut(s)	1548
PciSI	GCTCTTC	1 cut(s)	1410
PctI	GAATGC	3 cut(s)	1546, 1548, 1829
PdmI	GAANNNNTTC	2 cut(s)	1365, 1546
PfeI	GAWTC	5 cut(s)	380, 535, 707, 1079, 1720
PflMI	CCANNNNNTGG	1 cut(s)	1607
PkrI	GCNGC	6 cut(s)	248, 723, 859, 886, 1431, 1939
PleI	GAGTC	4 cut(s)	154, 202, 1953, 1973
PpsI	GAGTC	4 cut(s)	154, 202, 1953, 1973
Ppu21I	YACGTR	1 cut(s)	1313
PpuMI	RGGWCCY	1 cut(s)	43
PsiI	TTATAA	2 cut(s)	1022, 1907
Psp124BI	GAGCTC	1 cut(s)	1708
Psp5II	RGGWCCY	1 cut(s)	43
Psp6I	CCWGG	6 cut(s)	36, 241, 925, 1217, 1723, 1882
PspGI	CCWGG	6 cut(s)	36, 241, 925, 1217, 1723, 1882
PspN4I	GGNNCC	5 cut(s)	45, 54, 614, 1270, 1599
PspPI	GGNCC	6 cut(s)	43, 776, 1087, 1109, 1559, 1676
PspPPI	RGGWCCY	1 cut(s)	43
PstI	CTGCAG	1 cut(s)	1413
PsuI	RGATCY	1 cut(s)	612
RruI	TCGCGA	1 cut(s)	1446
RsaI	GTAC	3 cut(s)	240, 1188, 1762
RsaNI	GTAC	3 cut(s)	239, 1187, 1761
RseI	CAYNNNNRTG	1 cut(s)	1122
SacI	GAGCTC	1 cut(s)	1708
SapI	GCTCTTC	1 cut(s)	1410
SaqAI	TTAA	3 cut(s)	765, 1032, 1463
SatI	GCNGC	6 cut(s)	247, 722, 858, 885, 1430, 1938
Sau3AI	GATC	8 cut(s)	91, 573, 612, 897, 1327, 1413, 1492, 1508
Sau96I	GGNCC	6 cut(s)	43, 776, 1087, 1109, 1559, 1676
SchI	GAGTC	4 cut(s)	155, 202, 1954, 1973
ScrFI	CCNGG	6 cut(s)	38, 243, 927, 1219, 1725, 1884
SduI	GDGCHC	4 cut(s)	604, 646, 1708, 1878
SfaNI	GCATC	7 cut(s)	419, 676, 930, 1138, 1390, 1441, 1843
SfcI	CTRYAG	1 cut(s)	1409
SinI	GGWCC	4 cut(s)	43, 1087, 1109, 1676
SmiMI	CAYNNNNRTG	1 cut(s)	1122
SmlI	CTYRAG	2 cut(s)	831, 1031
SmoI	CTYRAG	2 cut(s)	831, 1031
SnaBI	TACGTA	1 cut(s)	1313
SpeI	ACTAGT	1 cut(s)	332
SsiI	CCGC	3 cut(s)	32, 826, 1090
SspMI	CTAG	6 cut(s)	333, 524, 621, 704, 747, 1785
SstI	GAGCTC	1 cut(s)	1708
StyD4I	CCNGG	6 cut(s)	36, 241, 925, 1217, 1723, 1882
StyI	CCWWGG	3 cut(s)	1197, 1255, 1643
TaaI	ACNGT	1 cut(s)	1585
TaiI	ACGT	1 cut(s)	1315
TaqI	TCGA	5 cut(s)	94, 149, 371, 533, 1507
TatI	WGTACW	1 cut(s)	1760
TfiI	GAWTC	5 cut(s)	380, 535, 707, 1079, 1720
Tru1I	TTAA	3 cut(s)	765, 1032, 1463
Tru9I	TTAA	3 cut(s)	765, 1032, 1463
TscAI	CASTG	1 cut(s)	900
TseI	GCWGC	6 cut(s)	246, 721, 857, 884, 1429, 1937
TspDTI	ATGAA	4 cut(s)	899, 950, 1371, 1388
TspGWI	ACGGA	3 cut(s)	403, 700, 1829
TspRI	CASTG	1 cut(s)	900
Van91I	CCANNNNNTGG	1 cut(s)	1607
Vha464I	CTTAAG	1 cut(s)	1031
VneI	GTGCAC	1 cut(s)	642
VpaK11BI	GGWCC	4 cut(s)	43, 1087, 1109, 1676
XagI	CCTNNNNNAGG	1 cut(s)	1259
XapI	RAATTY	2 cut(s)	606, 1332
XbaI	TCTAGA	1 cut(s)	703
XmnI	GAANNNNTTC	2 cut(s)	1365, 1546
XspI	CTAG	6 cut(s)	333, 524, 621, 704, 747, 1785
Zsp2I	ATGCAT	1 cut(s)	1548

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.