Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0010574

Physical Location & Seq

Genomic Coordinates Forward (+)

44394530 .. 44402620

Gene Structure 8091 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG400200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGTCTGCTCCATTGACACCTTCTAAGAGACCGCACCAGGAGGACCCTTCGGAGCCGAATGGGAAAGGGAAGTTACAAAAGTCTGATGATGATCAACCTACTAATGCTTCCTCTGGCAATGCTGTTTTTCGGGTAGTTTGCCCCGAGTCGAAAATTGGTTGTGTTACTGGTGAAGATGGCTCTGGCATATCCGAGATATATCAGGAGACTCTGGTGAAGGTGAGAGTTGAGGAAAGTGTACCCGGCTGCGACGAAAGAGTTATTGTCATTGGTTGGGATGGAGAGAATAGAGTTGATAGTGAGCAAAGCAAGGAGAATGGGGTGGAAGAGACTAGTGTAGTTGAAAAGAAGGAAGATGTTTCGATTGATGATTCGGAACGCCGCGAAAAAGTAAGTCCTGCATCCGTCAAGAAGGCTCTGCAACTTGTGTTTGAGAGAATGGTTGAAGGGGAAAGAGAGACTGATGGAGGGGATGGAGATGGTAAGAAGTCATTGACAATTGTTTTGAGGTTGCTAGTTCTGTCGAATCAAATAGGGTGCATTTTGGGAATAGGTGGTAGTGTGATCAAGCAAATGGCGTCTGAAAGTGGGGCACAAATTCGGATCCTTCCTAGAGATAAACTTCCATTGTGTGCACCAGCTTCAGATGAGTTAGTTCAGATTACTGGTGAAGTTGATGCTGTCAGGAAAGCTCTAGATTCCGTTACTCAGCAGCTTTTGGATAATCTGCCTCGTGCTAGTGCCTCTTCCTTTCTTAACTCCACAGGGCCGTCATCTCAACCTTCTCCAAGACCAGAAGTAACTCCGCCACCGGAGCGGTCTCAAGGAACACCTTATAGCAATCAGGCTGCTGATATTGTGGATAACCATTCTGCTGCTCATCCACTGATCCCAAAGGTTCATGCTTCTGGCATCCCTGGTAGGATGAAGTCTTCACAGGAAGTCCTAACTTTTCGCTTATTGTGCCACGAAGAGAGAGTAGGAGGTGTAATTGGAAAGGGTGGAACAATTATAAGGACACTTAAGCAAGAAACAGGCTGTGAAATCAAGGTTATGGATGGTGTCTCCGATTCAGAGGACCGCGTTATTATTTTATCTGGTCCGGCGCACCCAGATGATAGGATATCACCTCTGCAAGATGCCGTCCTTCGTGTGCATGATAGGATAGTCAGGGCAGTACCTATTACCAAGGAACAGCCCATGACAGCCAGGCTTCTTATTTCCTCCAATCAAATTGGTTGTCTCCTTGGCAAGGGTGGTGCCATCATAGCTGAAATGAGAAAGTCATCTCGCGCTCATATACGTATATTGGGGAAGGATCAAATTCCCAAATGTGTTTCAGATGATGAAGAAGTTGTTCAGATGAATGGAGAACTTGAAGCTGTGAATGATGCTCTTCTGCAGATCACCAGTAGGTTGCAGCATCATTTCTTTCGCGATGTATTTCCTTCTTTAAGTTATCCTCCAAATCCTGCATTTTCCGATCAACCTCCTTTTCGATCATATTTGAGGAGGGACTTCTCACCTCCAAGAATGCATTCTAACTTCGGCCCATCATTTCACAAGTTTGATACTGTTGGTGGTCTGGCTCCACATGGTGGTTTCCATCCTCTGCATTTATCAGAAAGAAAACCTTGGGGTTCTCAGGGACTTCTGGAGGGTGGTGGTCCAATTGGTTTGCCAAACTTTGCGGGAGCTCCACAAAGAAGGATTCCTGGGTTTGGAGGAAGCCAACCAGCAATAATTACCAGTACAACTATTGAAGCTGTTGTTCCTAGTTCCCTTATTCCTATAATAAATGGAGAAGATGGTGAATGCTTGAAACAAATCCGTCAGATTTCGGATGCAAAAATTACAATTACTGAGCCCCTACCTGGAGCAAAGGAAACTTTGATTATAATATCAGGAACACCTGAACAAACTCATGCTGCACAGAGTCTTATTCAAGCATTTGTGATGAGTGAAACCGATTCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

659

Amino Acids

71.0

Weight (kDa)

5.57

Isoelectric Point (pI)

49.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	43 - 91	2e-07	KH domain
KH_1	PF00013	169 - 235	1e-12	KH domain
KH_1	PF00013	317 - 369	2.7e-12	KH domain
KH_1	PF00013	402 - 470	2.7e-12	KH domain
KH_1	PF00013	587 - 649	3.1e-10	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010574)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g33520 FvH4_5g33520
malus_domestica	MD08G1211200.v1.1
prunus_persica	Prupe.1G543200_v2.0.a1 Prupe.1G543200_v2.0.a1 Prupe.1G543200_v2.0.a1
pyrus_communis	pycom08g18200 pycom15g35520
rosa_chinensis	RchiOBHm_Chr7g0232321
rosa_laevigata	RLG00000001357
rosa_multiflora	Rmu_co8258439.1_g000001 Rmu_sc0004136.1_g000004 Rmu_sc0034864.1_g000001
rosa_roxburghii	Rroxscaffold_3G00228470
rosa_rugosa	Rorug07G0272500 Rorug07G0272600
rosa_samantha	Rh7AG426500 Rh7BG400200 Rh7CG446200 Rh7DG417700
rosa_wichuraiana	Rw7G035360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1013, 1898
AccB1I	GGYRCC	1 cut(s)	1259
AccB7I	CCANNNNNTGG	1 cut(s)	1598
AccBSI	CCGCTC	1 cut(s)	817
AccII	CGCG	4 cut(s)	384, 1083, 1293, 1437
AciI	CCGC	6 cut(s)	32, 382, 806, 817, 1081, 1691
AclWI	GGATC	4 cut(s)	598, 611, 883, 1326
AcsI	RAATTY	2 cut(s)	597, 1323
AcuI	CTGAAG	1 cut(s)	627
AcyI	GRCGYC	1 cut(s)	578
AdeI	CACNNNGTG	1 cut(s)	1598
AfaI	GTAC	3 cut(s)	240, 1179, 1753
AfiI	CCNNNNNNNGG	4 cut(s)	1252, 1598, 1721, 1874
AflII	CTTAAG	1 cut(s)	1022
AgsI	TTSAA	6 cut(s)	344, 446, 1379, 1763, 1822, 1946
AhlI	ACTAGT	1 cut(s)	332
AjnI	CCWGG	5 cut(s)	36, 916, 1208, 1714, 1873
AjuI	GAANNNNNNNTTGG	2 cut(s)	1522, 1554
AluBI	AGCT	7 cut(s)	641, 692, 715, 1271, 1382, 1697, 1766
AluI	AGCT	7 cut(s)	641, 692, 715, 1271, 1382, 1697, 1766
Alw21I	GWGCWC	2 cut(s)	637, 1699
Alw26I	GTCTC	7 cut(s)	22, 200, 323, 452, 825, 1069, 1247
Alw44I	GTGCAC	1 cut(s)	633
AlwI	GGATC	4 cut(s)	598, 611, 883, 1326
Ama87I	CYCGRG	1 cut(s)	143
AoxI	GGCC	2 cut(s)	767, 1549
ApaLI	GTGCAC	1 cut(s)	633
ApeKI	GCWGC	6 cut(s)	246, 712, 848, 875, 1420, 1928
ApoI	RAATTY	2 cut(s)	597, 1323
ArsI	GACNNNNNNTTYG	4 cut(s)	487, 519, 1225, 1257
Asp700I	GAANNNNTTC	2 cut(s)	1356, 1537
AspLEI	GCGC	2 cut(s)	1108, 1295
AspS9I	GGNCC	6 cut(s)	43, 767, 1078, 1100, 1550, 1667
AsuC2I	CCSGG	1 cut(s)	243
AsuHPI	GGTGA	8 cut(s)	182, 226, 232, 680, 1119, 1399, 1515, 1823
AvaI	CYCGRG	1 cut(s)	143
AvaII	GGWCC	4 cut(s)	43, 1078, 1100, 1667
BaeGI	GKGCMC	2 cut(s)	595, 637
BamHI	GGATCC	1 cut(s)	603
BanI	GGYRCC	1 cut(s)	1259
BanII	GRGCYC	2 cut(s)	1699, 1869
BauI	CACGAG	1 cut(s)	732
BbsI	GAAGAC	1 cut(s)	924
Bbv12I	GWGCWC	2 cut(s)	637, 1699
BbvI	GCAGC	6 cut(s)	233, 724, 835, 862, 1432, 1915
BceAI	ACGGC	2 cut(s)	754, 1127
BciT130I	CCWGG	5 cut(s)	38, 918, 1210, 1716, 1875
BclI	TGATCA	2 cut(s)	91, 564
BcnI	CCSGG	1 cut(s)	243
BcoDI	GTCTC	7 cut(s)	22, 200, 323, 452, 825, 1069, 1247
BcuI	ACTAGT	1 cut(s)	332
BfaI	CTAG	6 cut(s)	333, 515, 612, 695, 738, 1776
BfmI	CTRYAG	1 cut(s)	1400
BfrI	CTTAAG	1 cut(s)	1022
BisI	GCNGC	7 cut(s)	247, 382, 713, 849, 876, 1421, 1929
BlsI	GCNGC	7 cut(s)	248, 383, 714, 850, 877, 1422, 1930
Bme1390I	CCNGG	6 cut(s)	38, 243, 918, 1210, 1716, 1875
Bme18I	GGWCC	4 cut(s)	43, 1078, 1100, 1667
BmeT110I	CYCGRG	1 cut(s)	143
BmgT120I	GGNCC	6 cut(s)	43, 767, 1078, 1100, 1550, 1667
BmiI	GGNNCC	5 cut(s)	45, 54, 605, 1261, 1590
BmrFI	CCNGG	6 cut(s)	38, 243, 918, 1210, 1716, 1875
BmsI	GCATC	7 cut(s)	410, 667, 921, 1129, 1381, 1432, 1834
BpiI	GAAGAC	1 cut(s)	924
BpmI	CTGGAG	2 cut(s)	1676, 1896
BpuEI	CTTGAG	1 cut(s)	807
BpuMI	CCSGG	1 cut(s)	243
BsaAI	YACGTR	1 cut(s)	1304
BsaBI	GATNNNNATC	1 cut(s)	90
BsaHI	GRCGYC	1 cut(s)	578
BsaI	GGTCTC	2 cut(s)	22, 825
BsaJI	CCNNGG	5 cut(s)	916, 1188, 1246, 1634, 1715
BsaWI	WCCGGW	1 cut(s)	811
Bsc4I	CCNNNNNNNGG	4 cut(s)	1252, 1598, 1721, 1874
Bse1I	ACTGG	4 cut(s)	172, 670, 1410, 1749
Bse3DI	GCAATG	1 cut(s)	124
Bse8I	GATNNNNATC	1 cut(s)	90
BseBI	CCWGG	5 cut(s)	38, 918, 1210, 1716, 1875
BseDI	CCNNGG	5 cut(s)	916, 1188, 1246, 1634, 1715
BseGI	GGATG	9 cut(s)	283, 401, 478, 880, 912, 930, 1063, 1606, 1849
BseJI	GATNNNNATC	1 cut(s)	90
BseLI	CCNNNNNNNGG	4 cut(s)	1252, 1598, 1721, 1874
BseMI	GCAATG	1 cut(s)	124
BseMII	CTCAG	3 cut(s)	722, 1658, 1854
BseNI	ACTGG	4 cut(s)	172, 670, 1410, 1749
BseRI	GAGGAG	1 cut(s)	1525
BseSI	GKGCMC	2 cut(s)	595, 637
BseXI	GCAGC	6 cut(s)	233, 724, 835, 862, 1432, 1915
BsgI	GTGCAG	1 cut(s)	1914
Bsh1236I	CGCG	4 cut(s)	384, 1083, 1293, 1437
BshFI	GGCC	2 cut(s)	769, 1551
BshNI	GGYRCC	1 cut(s)	1259
BsiHKAI	GWGCWC	2 cut(s)	637, 1699
BsiHKCI	CYCGRG	1 cut(s)	143
BsiSI	CCGG	3 cut(s)	243, 812, 1103
BslFI	GGGAC	2 cut(s)	1529, 1662
BslI	CCNNNNNNNGG	4 cut(s)	1252, 1598, 1721, 1874
BsmAI	GTCTC	7 cut(s)	22, 200, 323, 452, 825, 1069, 1247
BsmFI	GGGAC	2 cut(s)	1529, 1662
BsmI	GAATGC	3 cut(s)	1537, 1539, 1820
BsnI	GGCC	2 cut(s)	769, 1551
Bso31I	GGTCTC	2 cut(s)	22, 825
BsoBI	CYCGRG	1 cut(s)	143
Bsp1286I	GDGCHC	4 cut(s)	595, 637, 1699, 1869
Bsp143I	GATC	8 cut(s)	91, 564, 603, 888, 1318, 1404, 1483, 1499
Bsp68I	TCGCGA	1 cut(s)	1437
BspACI	CCGC	6 cut(s)	32, 382, 806, 817, 1081, 1691
BspANI	GGCC	2 cut(s)	769, 1551
BspCNI	CTCAG	3 cut(s)	721, 1657, 1855
BspFNI	CGCG	4 cut(s)	384, 1083, 1293, 1437
BspLI	GGNNCC	5 cut(s)	45, 54, 605, 1261, 1590
BspMAI	CTGCAG	1 cut(s)	1404
BspPI	GGATC	4 cut(s)	598, 611, 883, 1326
BspQI	GCTCTTC	1 cut(s)	1401
BspT107I	GGYRCC	1 cut(s)	1259
BspTI	CTTAAG	1 cut(s)	1022
BspTNI	GGTCTC	2 cut(s)	22, 825
BsrBI	CCGCTC	1 cut(s)	817
BsrDI	GCAATG	1 cut(s)	124
BsrI	ACTGG	4 cut(s)	172, 670, 1410, 1749
BssECI	CCNNGG	5 cut(s)	916, 1188, 1246, 1634, 1715
BssMI	GATC	8 cut(s)	91, 564, 603, 888, 1318, 1404, 1483, 1499
BssNI	GRCGYC	1 cut(s)	578
BssSI	CACGAG	1 cut(s)	732
BssT1I	CCWWGG	3 cut(s)	1188, 1246, 1634
Bst2BI	CACGAG	1 cut(s)	732
Bst2UI	CCWGG	5 cut(s)	38, 918, 1210, 1716, 1875
Bst4CI	ACNGT	1 cut(s)	1576
Bst6I	CTCTTC	4 cut(s)	321, 751, 966, 1401
BstACI	GRCGYC	1 cut(s)	578
BstAFI	CTTAAG	1 cut(s)	1022
BstBAI	YACGTR	1 cut(s)	1304
BstDEI	CTNAG	4 cut(s)	24, 708, 1644, 1863
BstENI	CCTNNNNNAGG	1 cut(s)	1250
BstF5I	GGATG	9 cut(s)	283, 401, 478, 880, 912, 930, 1063, 1606, 1849
BstFNI	CGCG	4 cut(s)	384, 1083, 1293, 1437
BstHHI	GCGC	2 cut(s)	1108, 1295
BstKTI	GATC	8 cut(s)	94, 567, 606, 891, 1321, 1407, 1486, 1502
BstMAI	GTCTC	7 cut(s)	22, 200, 323, 452, 825, 1069, 1247
BstMBI	GATC	8 cut(s)	91, 564, 603, 888, 1318, 1404, 1483, 1499
BstMWI	GCNNNNNNNGC	3 cut(s)	814, 963, 1268
BstNI	CCWGG	5 cut(s)	38, 918, 1210, 1716, 1875
BstSCI	CCNGG	6 cut(s)	36, 241, 916, 1208, 1714, 1873
BstSFI	CTRYAG	1 cut(s)	1400
BstSLI	GKGCMC	2 cut(s)	595, 637
BstSNI	TACGTA	1 cut(s)	1304
BstUI	CGCG	4 cut(s)	384, 1083, 1293, 1437
BstV1I	GCAGC	6 cut(s)	233, 724, 835, 862, 1432, 1915
BstV2I	GAAGAC	1 cut(s)	924
BstX2I	RGATCY	1 cut(s)	603
BstYI	RGATCY	1 cut(s)	603
BsuRI	GGCC	2 cut(s)	769, 1551
BtgZI	GCGATG	1 cut(s)	1452
BtsCI	GGATG	9 cut(s)	283, 401, 478, 880, 912, 930, 1063, 1606, 1849
BtsIMutI	CAGTG	1 cut(s)	884
BtuMI	TCGCGA	1 cut(s)	1437
CfoI	GCGC	2 cut(s)	1108, 1295
Cfr13I	GGNCC	6 cut(s)	43, 767, 1078, 1100, 1550, 1667
CseI	GACGC	1 cut(s)	567
Csp6I	GTAC	3 cut(s)	239, 1178, 1752
CviAII	CATG	5 cut(s)	902, 1157, 1201, 1595, 1925
CviQI	GTAC	3 cut(s)	239, 1178, 1752
DdeI	CTNAG	4 cut(s)	24, 708, 1644, 1863
DpnI	GATC	8 cut(s)	93, 566, 605, 890, 1320, 1406, 1485, 1501
DpnII	GATC	8 cut(s)	91, 564, 603, 888, 1318, 1404, 1483, 1499
DraIII	CACNNNGTG	1 cut(s)	1598
Eam1104I	CTCTTC	4 cut(s)	321, 751, 966, 1401
EarI	CTCTTC	4 cut(s)	321, 751, 966, 1401
EciI	GGCGGA	1 cut(s)	795
Ecl136II	GAGCTC	1 cut(s)	1697
Eco105I	TACGTA	1 cut(s)	1304
Eco130I	CCWWGG	3 cut(s)	1188, 1246, 1634
Eco24I	GRGCYC	2 cut(s)	1699, 1869
Eco31I	GGTCTC	2 cut(s)	22, 825
Eco32I	GATATC	1 cut(s)	1125
Eco47I	GGWCC	4 cut(s)	43, 1078, 1100, 1667
Eco53kI	GAGCTC	1 cut(s)	1697
Eco57I	CTGAAG	1 cut(s)	627
Eco88I	CYCGRG	1 cut(s)	143
EcoICRI	GAGCTC	1 cut(s)	1697
EcoNI	CCTNNNNNAGG	1 cut(s)	1250
EcoO109I	RGGNCCY	1 cut(s)	43
EcoRII	CCWGG	5 cut(s)	36, 916, 1208, 1714, 1873
EcoRV	GATATC	1 cut(s)	1125
EcoT14I	CCWWGG	3 cut(s)	1188, 1246, 1634
EcoT22I	ATGCAT	1 cut(s)	1539
EcoT38I	GRGCYC	2 cut(s)	1699, 1869
ErhI	CCWWGG	3 cut(s)	1188, 1246, 1634
FaeI	CATG	5 cut(s)	905, 1160, 1204, 1598, 1928
FalI	AAGNNNNNCTT	2 cut(s)	1618, 1650
FaqI	GGGAC	2 cut(s)	1529, 1662
FatI	CATG	5 cut(s)	901, 1156, 1200, 1594, 1924
FauI	CCCGC	1 cut(s)	1684
FbaI	TGATCA	2 cut(s)	91, 564
Fnu4HI	GCNGC	7 cut(s)	247, 382, 713, 849, 876, 1421, 1929
FokI	GGATG	9 cut(s)	290, 388, 485, 867, 899, 937, 1070, 1593, 1856
FriOI	GRGCYC	2 cut(s)	1699, 1869
Fsp4HI	GCNGC	7 cut(s)	247, 382, 713, 849, 876, 1421, 1929
FspBI	CTAG	6 cut(s)	333, 515, 612, 695, 738, 1776
GlaI	GCGC	2 cut(s)	1107, 1294
GluI	GCNGC	7 cut(s)	247, 382, 713, 849, 876, 1421, 1929
GsuI	CTGGAG	2 cut(s)	1676, 1896
HaeIII	GGCC	2 cut(s)	769, 1551
HapII	CCGG	3 cut(s)	243, 812, 1103
HgaI	GACGC	1 cut(s)	567
HhaI	GCGC	2 cut(s)	1108, 1295
Hin1I	GRCGYC	1 cut(s)	578
Hin1II	CATG	5 cut(s)	905, 1160, 1204, 1598, 1928
Hin6I	GCGC	2 cut(s)	1106, 1293
HinP1I	GCGC	2 cut(s)	1106, 1293
HinfI	GANTC	9 cut(s)	146, 208, 371, 526, 698, 1070, 1711, 1936, 1970
HpaII	CCGG	3 cut(s)	243, 812, 1103
HphI	GGTGA	8 cut(s)	182, 226, 232, 680, 1119, 1399, 1515, 1823
Hpy166II	GTNNAC	2 cut(s)	239, 635
Hpy188III	TCNNGA	8 cut(s)	203, 409, 685, 695, 1436, 1655, 1905, 1977
Hpy8I	GTNNAC	2 cut(s)	239, 635
Hpy99I	CGWCG	1 cut(s)	254
HpyCH4III	ACNGT	1 cut(s)	1576
HpyCH4IV	ACGT	1 cut(s)	1303
HpyF10VI	GCNNNNNNNGC	3 cut(s)	814, 963, 1268
HpyF3I	CTNAG	4 cut(s)	24, 708, 1644, 1863
HpySE526I	ACGT	1 cut(s)	1303
Hsp92I	GRCGYC	1 cut(s)	578
Hsp92II	CATG	5 cut(s)	905, 1160, 1204, 1598, 1928
HspAI	GCGC	2 cut(s)	1106, 1293
Ksp22I	TGATCA	2 cut(s)	91, 564
Kzo9I	GATC	8 cut(s)	91, 564, 603, 888, 1318, 1404, 1483, 1499
LguI	GCTCTTC	1 cut(s)	1401
LmnI	GCTCC	7 cut(s)	13, 52, 814, 1594, 1694, 1702, 1877
Lsp1109I	GCAGC	6 cut(s)	233, 724, 835, 862, 1432, 1915
LweI	GCATC	7 cut(s)	410, 667, 921, 1129, 1381, 1432, 1834
MaeI	CTAG	6 cut(s)	333, 515, 612, 695, 738, 1776
MaeII	ACGT	1 cut(s)	1303
MaeIII	GTNAC	4 cut(s)	72, 163, 703, 799
MalI	GATC	8 cut(s)	93, 566, 605, 890, 1320, 1406, 1485, 1501
MbiI	CCGCTC	1 cut(s)	817
MboI	GATC	8 cut(s)	91, 564, 603, 888, 1318, 1404, 1483, 1499
MfeI	CAATTG	2 cut(s)	498, 1671
MflI	RGATCY	1 cut(s)	603
MhlI	GDGCHC	4 cut(s)	595, 637, 1699, 1869
MlyI	GAGTC	3 cut(s)	155, 202, 1945
Mph1103I	ATGCAT	1 cut(s)	1539
MroXI	GAANNNNTTC	2 cut(s)	1356, 1537
MseI	TTAA	3 cut(s)	756, 1023, 1454
MslI	CAYNNNNRTG	1 cut(s)	1113
MspCI	CTTAAG	1 cut(s)	1022
MspI	CCGG	3 cut(s)	243, 812, 1103
MspR9I	CCNGG	6 cut(s)	38, 243, 918, 1210, 1716, 1875
MunI	CAATTG	2 cut(s)	498, 1671
Mva1269I	GAATGC	3 cut(s)	1537, 1539, 1820
MvaI	CCWGG	5 cut(s)	38, 918, 1210, 1716, 1875
MvnI	CGCG	4 cut(s)	384, 1083, 1293, 1437
MwoI	GCNNNNNNNGC	3 cut(s)	814, 963, 1268
NciI	CCSGG	1 cut(s)	243
NdeII	GATC	8 cut(s)	91, 564, 603, 888, 1318, 1404, 1483, 1499
NlaIII	CATG	5 cut(s)	905, 1160, 1204, 1598, 1928
NlaIV	GGNNCC	5 cut(s)	45, 54, 605, 1261, 1590
NruI	TCGCGA	1 cut(s)	1437
NsiI	ATGCAT	1 cut(s)	1539
PciSI	GCTCTTC	1 cut(s)	1401
PctI	GAATGC	3 cut(s)	1537, 1539, 1820
PdmI	GAANNNNTTC	2 cut(s)	1356, 1537
PfeI	GAWTC	6 cut(s)	371, 526, 698, 1070, 1711, 1970
PflMI	CCANNNNNTGG	1 cut(s)	1598
PkrI	GCNGC	7 cut(s)	248, 383, 714, 850, 877, 1422, 1930
PleI	GAGTC	3 cut(s)	154, 202, 1944
PpsI	GAGTC	3 cut(s)	154, 202, 1944
Ppu21I	YACGTR	1 cut(s)	1304
PpuMI	RGGWCCY	1 cut(s)	43
PsiI	TTATAA	2 cut(s)	1013, 1898
Psp124BI	GAGCTC	1 cut(s)	1699
Psp5II	RGGWCCY	1 cut(s)	43
Psp6I	CCWGG	5 cut(s)	36, 916, 1208, 1714, 1873
PspGI	CCWGG	5 cut(s)	36, 916, 1208, 1714, 1873
PspN4I	GGNNCC	5 cut(s)	45, 54, 605, 1261, 1590
PspPI	GGNCC	6 cut(s)	43, 767, 1078, 1100, 1550, 1667
PspPPI	RGGWCCY	1 cut(s)	43
PstI	CTGCAG	1 cut(s)	1404
PsuI	RGATCY	1 cut(s)	603
RruI	TCGCGA	1 cut(s)	1437
RsaI	GTAC	3 cut(s)	240, 1179, 1753
RsaNI	GTAC	3 cut(s)	239, 1178, 1752
RseI	CAYNNNNRTG	1 cut(s)	1113
SacI	GAGCTC	1 cut(s)	1699
SapI	GCTCTTC	1 cut(s)	1401
SaqAI	TTAA	3 cut(s)	756, 1023, 1454
SatI	GCNGC	7 cut(s)	247, 382, 713, 849, 876, 1421, 1929
Sau3AI	GATC	8 cut(s)	91, 564, 603, 888, 1318, 1404, 1483, 1499
Sau96I	GGNCC	6 cut(s)	43, 767, 1078, 1100, 1550, 1667
SchI	GAGTC	3 cut(s)	155, 202, 1945
ScrFI	CCNGG	6 cut(s)	38, 243, 918, 1210, 1716, 1875
SduI	GDGCHC	4 cut(s)	595, 637, 1699, 1869
SfaNI	GCATC	7 cut(s)	410, 667, 921, 1129, 1381, 1432, 1834
SfcI	CTRYAG	1 cut(s)	1400
SinI	GGWCC	4 cut(s)	43, 1078, 1100, 1667
SmiMI	CAYNNNNRTG	1 cut(s)	1113
SmlI	CTYRAG	2 cut(s)	822, 1022
SmoI	CTYRAG	2 cut(s)	822, 1022
SnaBI	TACGTA	1 cut(s)	1304
SpeI	ACTAGT	1 cut(s)	332
SsiI	CCGC	6 cut(s)	32, 382, 806, 817, 1081, 1691
SspMI	CTAG	6 cut(s)	333, 515, 612, 695, 738, 1776
SstI	GAGCTC	1 cut(s)	1699
StyD4I	CCNGG	6 cut(s)	36, 241, 916, 1208, 1714, 1873
StyI	CCWWGG	3 cut(s)	1188, 1246, 1634
TaaI	ACNGT	1 cut(s)	1576
TaiI	ACGT	1 cut(s)	1306
TaqI	TCGA	4 cut(s)	149, 362, 524, 1498
TatI	WGTACW	1 cut(s)	1751
TauI	GCSGC	1 cut(s)	384
TfiI	GAWTC	6 cut(s)	371, 526, 698, 1070, 1711, 1970
Tru1I	TTAA	3 cut(s)	756, 1023, 1454
Tru9I	TTAA	3 cut(s)	756, 1023, 1454
TscAI	CASTG	1 cut(s)	891
TseI	GCWGC	6 cut(s)	246, 712, 848, 875, 1420, 1928
TspDTI	ATGAA	4 cut(s)	890, 941, 1362, 1379
TspGWI	ACGGA	3 cut(s)	394, 691, 1820
TspRI	CASTG	1 cut(s)	891
Van91I	CCANNNNNTGG	1 cut(s)	1598
Vha464I	CTTAAG	1 cut(s)	1022
VneI	GTGCAC	1 cut(s)	633
VpaK11BI	GGWCC	4 cut(s)	43, 1078, 1100, 1667
XagI	CCTNNNNNAGG	1 cut(s)	1250
XapI	RAATTY	2 cut(s)	597, 1323
XbaI	TCTAGA	1 cut(s)	694
XmnI	GAANNNNTTC	2 cut(s)	1356, 1537
XspI	CTAG	6 cut(s)	333, 515, 612, 695, 738, 1776
Zsp2I	ATGCAT	1 cut(s)	1539

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.