RchiOBHm_Chr7g0235311

Ubiquinol-cytochrome c reductase complex 6.7 kDa protein-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
60071989 .. 60072165
177 bp
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UTR
Exon/CDS
Intron
PRQ21090

Sequence Viewer

Length: 177 bp
ATGGCCGGTGACGTGGGTATGTTCAAGTTCCTGAAGCCCAAGAGTCGTCCTCACCCCGTGGATATCCAAGCCGCTGCCTTGTGGGGTGTCGCTGCCGGCACCACCGCTCTTTGGGTCGTCCAGCCATTCAACTGGATAAAGAAGACCTTTTTTGAGACTCCAGAACCAGAAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

58

Amino Acids

6.49

Weight (kDa)

9.3

Isoelectric Point (pI)

30.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 98
AccBSI CCGCTC 1 cut(s) 107
AciI CCGC 2 cut(s) 72, 105
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 53
AdeI CACNNNGTG 1 cut(s) 58
AfiI CCNNNNNNNGG 1 cut(s) 111
AgsI TTSAA 2 cut(s) 25, 130
AjiI CACGTC 1 cut(s) 13
Alw26I GTCTC 1 cut(s) 149
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 2 cut(s) 74, 92
AsuHPI GGTGA 2 cut(s) 20, 44
BanI GGYRCC 1 cut(s) 98
BbsI GAAGAC 1 cut(s) 149
BbvI GCAGC 2 cut(s) 61, 79
BcoDI GTCTC 1 cut(s) 149
BisI GCNGC 3 cut(s) 72, 75, 93
BlsI GCNGC 3 cut(s) 73, 76, 94
BmgBI CACGTC 1 cut(s) 13
BmiI GGNNCC 1 cut(s) 100
BpiI GAAGAC 1 cut(s) 149
BplI GAGNNNNNCTC 2 cut(s) 34, 66
BpmI CTGGAG 1 cut(s) 144
BsaJI CCNNGG 1 cut(s) 57
Bsc4I CCNNNNNNNGG 1 cut(s) 111
Bse118I RCCGGY 2 cut(s) 5, 95
Bse1I ACTGG 1 cut(s) 137
BseDI CCNNGG 1 cut(s) 57
BseLI CCNNNNNNNGG 1 cut(s) 111
BseNI ACTGG 1 cut(s) 137
BseXI GCAGC 2 cut(s) 61, 79
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 1 cut(s) 98
BsiSI CCGG 2 cut(s) 6, 96
BslI CCNNNNNNNGG 1 cut(s) 111
BsmAI GTCTC 1 cut(s) 149
BsnI GGCC 1 cut(s) 5
BspACI CCGC 2 cut(s) 72, 105
BspANI GGCC 1 cut(s) 5
BspLI GGNNCC 1 cut(s) 100
BspT107I GGYRCC 1 cut(s) 98
BsrBI CCGCTC 1 cut(s) 107
BsrFI RCCGGY 2 cut(s) 5, 95
BsrI ACTGG 1 cut(s) 137
BssAI RCCGGY 2 cut(s) 5, 95
BssECI CCNNGG 1 cut(s) 57
BstC8I GCNNGC 1 cut(s) 97
BstDSI CCRYGG 1 cut(s) 57
BstMAI GTCTC 1 cut(s) 149
BstV1I GCAGC 2 cut(s) 61, 79
BstV2I GAAGAC 1 cut(s) 149
BstXI CCANNNNNNTGG 1 cut(s) 132
BsuRI GGCC 1 cut(s) 5
BtgI CCRYGG 1 cut(s) 57
BtrI CACGTC 1 cut(s) 13
Cac8I GCNNGC 1 cut(s) 97
Cfr10I RCCGGY 2 cut(s) 5, 95
CviJI RGCY 4 cut(s) 5, 37, 71, 124
CviKI_1 RGCY 4 cut(s) 5, 37, 71, 124
DraIII CACNNNGTG 1 cut(s) 58
EaeI YGGCCR 1 cut(s) 3
Eco32I GATATC 1 cut(s) 64
Eco57I CTGAAG 1 cut(s) 53
EcoRV GATATC 1 cut(s) 64
FaiI YATR 1 cut(s) 20
FalI AAGNNNNNCTT 2 cut(s) 131, 163
Fnu4HI GCNGC 3 cut(s) 72, 75, 93
Fsp4HI GCNGC 3 cut(s) 72, 75, 93
GluI GCNGC 3 cut(s) 72, 75, 93
GsuI CTGGAG 1 cut(s) 144
HaeIII GGCC 1 cut(s) 5
HapII CCGG 2 cut(s) 6, 96
HinfI GANTC 2 cut(s) 43, 157
HpaII CCGG 2 cut(s) 6, 96
HphI GGTGA 2 cut(s) 20, 44
Hpy188III TCNNGA 2 cut(s) 31, 161
HpyCH4IV ACGT 1 cut(s) 12
HpySE526I ACGT 1 cut(s) 12
KroI GCCGGC 1 cut(s) 95
KroNI GCCGGC 1 cut(s) 97
LpnPI CCDG 5 cut(s) 19, 44, 109, 118, 134
Lsp1109I GCAGC 2 cut(s) 61, 79
MaeII ACGT 1 cut(s) 12
MaeIII GTNAC 1 cut(s) 8
MbiI CCGCTC 1 cut(s) 107
MboII GAAGA 1 cut(s) 154
MlyI GAGTC 2 cut(s) 52, 151
MnlI CCTC 1 cut(s) 60
MroNI GCCGGC 1 cut(s) 95
MspA1I CMGCKG 1 cut(s) 74
MspI CCGG 2 cut(s) 6, 96
NaeI GCCGGC 1 cut(s) 97
NgoMIV GCCGGC 1 cut(s) 95
NlaIV GGNNCC 1 cut(s) 100
NmuCI GTSAC 1 cut(s) 8
PdiI GCCGGC 1 cut(s) 97
PkrI GCNGC 3 cut(s) 73, 76, 94
PleI GAGTC 2 cut(s) 51, 151
PpsI GAGTC 2 cut(s) 51, 151
PspN4I GGNNCC 1 cut(s) 100
SatI GCNGC 3 cut(s) 72, 75, 93
SchI GAGTC 2 cut(s) 52, 151
SetI ASST 2 cut(s) 15, 149
SsiI CCGC 2 cut(s) 72, 105
TaiI ACGT 1 cut(s) 15
TauI GCSGC 1 cut(s) 74
TseFI GTSAC 1 cut(s) 8
TseI GCWGC 2 cut(s) 74, 92
Tsp45I GTSAC 1 cut(s) 8
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.