RLG00000002212

MACPF domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0007444
Physical Location & Seq
Reverse (-)
29702515 .. 29707303
4789 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002212

Sequence Viewer

Length: 1806 bp
ATGGCGCTCAAGGTTGCAGCTCCAAAAGCTGCTGAGGCCGCGGTTGCATCAATTGGGCGTGGATATGATGTATCCATTGATCTAAGGCTCAAGTACTGCAAAGGGAACTCTCGATTGATTGAAATTGACGACGACGACGGGGGTCGCCAGGTTCTTCTTCCAGGTGGAATTACGATCCCCAACGTTTCCAAATCCATCAAATGCGATAAAGGAGAGCGCACACGTTTCAGGTCCGATGTTCTCTCTTTCCAACAGATGTCAGAGCAGTTCAACCAGCAAGTTTCTTTGACCGGAAAAATACCCTCGGGTCTCTTCAATTCTATGTTTGAATTCTCAGGTTGTTGGCAGAAAGATGCAGCCAACACCAAGACCCTTGCTTTCGACGGGGTCTTCATCACGCTCTATACTGTTGCTCTCGAGAAGTCTCAGATGGTACTACGTGATGATGTTAAAAAAGCAGTCCCATCATCATGGGAACCTGCCGCATTAGCAAGGTTTATAGAGACATTTGGAACGCATATAGTTGTTGGTGTGAAGATGGGAGGTAAAGATGTCGTCTATATGAAGCAGCAGCATTCTTCAACTCTTCAACCAGCTGATATACAGAGAAGATTGAAGGACATGGCAGATAAAAGATTTTTAGATGCCAATGGACAGTACGGCATACCGTCTGAACAAGCTTACAAGAATGACAAGTTTGAAATCAGGGAGCAGCGGTTGCGGTTTGCAGATACTAGTCCATCAAGTTCTTATTCACACAAGGAAGATATTGTAAGCATACGCAAAAGGAGAGGTGGAAGTGATATTAAGAACCTACCCCATAATGAATGGTTACAAACTGTTCAACTTGAACCTGATGTGATCACAATGTCATTTATGCCAATTACCTCTCTGCTAAATGGAGTCCCGGGGAGTGGATTCTTGAGCCACGCAATAAATCTTTATTTAAGATATAAACCACCAATTGAAGAGCTCCATCAGTTTTTGGAATTTCAGCTGCCAAGGCAGTGGGCGCCGGTTTTCAGTGACCTTCCACTTGGTCCACAAAGAAAGCATCAAAGCAATACATCTCTTCAGTTTAGCTTAATGGGGCCCAAGCTTTATGTCAATACTAGTCTGGTTGATGTAGGAAAGAGGCCAGTGACTGGTCTGCGGCTGTATCTAGAAGGCAAAAGAAGCAACCGGTTGGCCATCCACTTGCAACACCTCTCCTCTCTTCCGAAAATCTTCCAACTCGAAGAAGATCCAAATGGAAATTTCCGTCGTGATTCTTATGATCGTAAATACTATGAGAAAGTCCAATGGAAGAACTTCTCTCATGTATGCACTGCTCCTGTGGAGTCGGATGAGGATCTTTCAATAGTAACTGGGGCACAGTTGCAGGTTGAGAAATATGGGATGAAGAATATTCTCTTCTTGAGACTCCGCTTCTCTACTGTTTCGGGAGCTACAATAGTAAAGCATCCCGAATGGGATGGGTCACCAGGGTTGGCCCATAAGTCAGGACTCATATCAACACTAATCAGTCATCACTTTACAGCAGTTCAAAAGCCACCTCCACGACCAGCAGATGTCAACATAAACTCGGCTGTCTACCCCGGGGGTCCTCCAGTTCCCATCCAAGCGCCAAAGCTCAGGAAATTTGTGGATACAACAGAAATGACAAGGGGGCCACAGGAAACTCCAGGTTATTGGGTTGTATCTGGGGCAAGACTAGTTGTCGAAAAGGGCAGGATATCCCTCCGTGTGAAGTATTCTTTATTGACTGTAATATTACCTGATGAAGAAGAGTTGGAGGAACATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MACPF

Protein Analysis

602

Amino Acids

67.51

Weight (kDa)

9.17

Isoelectric Point (pI)

47.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MACPF PF01823 104 - 315 2e-40 MAC/Perforin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 487, 1372
AccB1I GGYRCC 1 cut(s) 1012
AccB7I CCANNNNNTGG 1 cut(s) 1145
AccI GTMKAC 1 cut(s) 1593
AccII CGCG 1 cut(s) 41
AciI CCGC 7 cut(s) 39, 41, 483, 715, 721, 1153, 1426
AclI AACGTT 1 cut(s) 183
AclWI GGATC 3 cut(s) 169, 1238, 1359
AcoI YGGCCR 1 cut(s) 1188
AcsI RAATTY 4 cut(s) 329, 989, 1255, 1640
AcuI CTGAAG 1 cut(s) 1058
AcyI GRCGYC 1 cut(s) 1013
AfaI GTAC 3 cut(s) 95, 435, 659
AfiI CCNNNNNNNGG 2 cut(s) 914, 1145
AflIII ACRYGT 1 cut(s) 221
AgeI ACCGGT 1 cut(s) 1182
AhdI GACNNNNNGTC 1 cut(s) 1718
AhlI ACTAGT 3 cut(s) 734, 1112, 1714
AjnI CCWGG 4 cut(s) 147, 160, 1483, 1684
Alw21I GWGCWC 1 cut(s) 975
Alw26I GTCTC 4 cut(s) 314, 429, 497, 1414
AlwI GGATC 3 cut(s) 169, 1238, 1359
AlwNI CAGNNNCTG 1 cut(s) 1145
Ama87I CYCGRG 4 cut(s) 304, 416, 907, 1598
AoxI GGCC 6 cut(s) 36, 1091, 1136, 1188, 1491, 1670
ApaI GGGCCC 1 cut(s) 1095
ApeKI GCWGC 7 cut(s) 17, 29, 356, 568, 571, 712, 997
ApoI RAATTY 4 cut(s) 329, 989, 1255, 1640
AsiGI ACCGGT 1 cut(s) 1182
Asp700I GAANNNNTTC 2 cut(s) 1226, 1310
AspLEI GCGC 4 cut(s) 7, 219, 1015, 1627
AspS9I GGNCC 7 cut(s) 231, 1040, 1091, 1092, 1492, 1604, 1670
AsuC2I CCSGG 4 cut(s) 908, 909, 1599, 1600
AsuHPI GGTGA 1 cut(s) 1473
AvaI CYCGRG 4 cut(s) 304, 416, 907, 1598
AvaII GGWCC 3 cut(s) 231, 1040, 1604
BaeGI GKGCMC 2 cut(s) 1095, 1375
BalI TGGCCA 1 cut(s) 1190
BanI GGYRCC 1 cut(s) 1012
BanII GRGCYC 2 cut(s) 975, 1095
BbsI GAAGAC 1 cut(s) 382
Bbv12I GWGCWC 1 cut(s) 975
BbvCI CCTCAGC 1 cut(s) 33
BbvI GCAGC 7 cut(s) 16, 29, 368, 580, 583, 724, 984
BccI CCATC 9 cut(s) 203, 424, 472, 532, 748, 984, 1199, 1469, 1625
BceAI ACGGC 1 cut(s) 676
BciT130I CCWGG 4 cut(s) 149, 162, 1485, 1686
BciVI GTATCC 2 cut(s) 82, 1642
BclI TGATCA 1 cut(s) 861
BcnI CCSGG 4 cut(s) 908, 909, 1599, 1600
BcoDI GTCTC 4 cut(s) 314, 429, 497, 1414
BcuI ACTAGT 3 cut(s) 734, 1112, 1714
BfaI CTAG 4 cut(s) 735, 1113, 1163, 1715
BfoI RGCGCY 3 cut(s) 8, 1016, 1628
BfuAI ACCTGC 2 cut(s) 487, 1372
BfuI GTATCC 2 cut(s) 82, 1642
BmcAI AGTACT 1 cut(s) 95
Bme1390I CCNGG 8 cut(s) 149, 162, 908, 909, 1485, 1599, 1600, 1686
Bme18I GGWCC 3 cut(s) 231, 1040, 1604
BmeRI GACNNNNNGTC 1 cut(s) 1718
BmeT110I CYCGRG 4 cut(s) 304, 416, 907, 1598
BmgT120I GGNCC 7 cut(s) 231, 1040, 1091, 1092, 1492, 1604, 1670
BmiI GGNNCC 6 cut(s) 477, 1014, 1092, 1093, 1605, 1671
BmrFI CCNGG 8 cut(s) 149, 162, 908, 909, 1485, 1599, 1600, 1686
BmrI ACTGGG 1 cut(s) 1377
BmsI GCATC 5 cut(s) 56, 343, 634, 1063, 1471
BmuI ACTGGG 1 cut(s) 1377
BoxI GACNNNNGTC 1 cut(s) 141
BpiI GAAGAC 1 cut(s) 382
BpmI CTGGAG 2 cut(s) 1593, 1668
Bpu10I CCTNAGC 2 cut(s) 33, 1634
BpuEI CTTGAG 3 cut(s) 74, 943, 1438
BpuMI CCSGG 4 cut(s) 908, 909, 1599, 1600
BsaAI YACGTR 1 cut(s) 440
BsaBI GATNNNNATC 1 cut(s) 1350
BsaHI GRCGYC 1 cut(s) 1013
BsaI GGTCTC 1 cut(s) 314
BsaJI CCNNGG 9 cut(s) 39, 303, 907, 908, 1001, 1484, 1597, 1598, 1599
BsaWI WCCGGW 2 cut(s) 290, 1182
BsaXI ACNNNNNCTCC 2 cut(s) 701, 731
Bsc4I CCNNNNNNNGG 2 cut(s) 914, 1145
Bse118I RCCGGY 2 cut(s) 1015, 1182
Bse1I ACTGG 4 cut(s) 1139, 1150, 1372, 1610
Bse8I GATNNNNATC 1 cut(s) 1350
BseBI CCWGG 4 cut(s) 149, 162, 1485, 1686
BseDI CCNNGG 9 cut(s) 39, 303, 907, 908, 1001, 1484, 1597, 1598, 1599
BseGI GGATG 6 cut(s) 1191, 1351, 1404, 1462, 1480, 1617
BseJI GATNNNNATC 1 cut(s) 1350
BseLI CCNNNNNNNGG 2 cut(s) 914, 1145
BseMII CTCAG 4 cut(s) 24, 348, 440, 1648
BseNI ACTGG 4 cut(s) 1139, 1150, 1372, 1610
BseRI GAGGAG 1 cut(s) 1201
BseSI GKGCMC 2 cut(s) 1095, 1375
BseXI GCAGC 7 cut(s) 16, 29, 368, 580, 583, 724, 984
Bsh1236I CGCG 1 cut(s) 41
BshFI GGCC 6 cut(s) 38, 1093, 1138, 1190, 1493, 1672
BshNI GGYRCC 1 cut(s) 1012
BshTI ACCGGT 1 cut(s) 1182
BsiHKAI GWGCWC 1 cut(s) 975
BsiHKCI CYCGRG 4 cut(s) 304, 416, 907, 1598
BsiSI CCGG 5 cut(s) 291, 908, 1016, 1183, 1599
BslFI GGGAC 2 cut(s) 446, 890
BslI CCNNNNNNNGG 2 cut(s) 914, 1145
BsmAI GTCTC 4 cut(s) 314, 429, 497, 1414
BsmFI GGGAC 2 cut(s) 446, 890
BsmI GAATGC 1 cut(s) 574
BsnI GGCC 6 cut(s) 38, 1093, 1138, 1190, 1493, 1672
Bso31I GGTCTC 1 cut(s) 314
BsoBI CYCGRG 4 cut(s) 304, 416, 907, 1598
Bsp120I GGGCCC 1 cut(s) 1091
Bsp1286I GDGCHC 3 cut(s) 975, 1095, 1375
Bsp143I GATC 6 cut(s) 79, 174, 861, 1243, 1276, 1351
BspACI CCGC 7 cut(s) 39, 41, 483, 715, 721, 1153, 1426
BspANI GGCC 6 cut(s) 38, 1093, 1138, 1190, 1493, 1672
BspCNI CTCAG 4 cut(s) 25, 347, 439, 1647
BspFNI CGCG 1 cut(s) 41
BspLI GGNNCC 6 cut(s) 477, 1014, 1092, 1093, 1605, 1671
BspMI ACCTGC 2 cut(s) 487, 1372
BspPI GGATC 3 cut(s) 169, 1238, 1359
BspQI GCTCTTC 1 cut(s) 963
BspT107I GGYRCC 1 cut(s) 1012
BspTNI GGTCTC 1 cut(s) 314
BsrFI RCCGGY 2 cut(s) 1015, 1182
BsrI ACTGG 4 cut(s) 1139, 1150, 1372, 1610
BssAI RCCGGY 2 cut(s) 1015, 1182
BssECI CCNNGG 9 cut(s) 39, 303, 907, 908, 1001, 1484, 1597, 1598, 1599
BssMI GATC 6 cut(s) 79, 174, 861, 1243, 1276, 1351
BssNI GRCGYC 1 cut(s) 1013
BssT1I CCWWGG 1 cut(s) 1001
Bst2UI CCWGG 4 cut(s) 149, 162, 1485, 1686
Bst4CI ACNGT 7 cut(s) 409, 657, 669, 841, 1377, 1438, 1768
Bst6I CTCTTC 7 cut(s) 317, 591, 963, 1077, 1221, 1418, 1782
BstACI GRCGYC 1 cut(s) 1013
BstAPI GCANNNNNTGC 1 cut(s) 718
BstBAI YACGTR 1 cut(s) 440
BstDEI CTNAG 5 cut(s) 33, 83, 334, 426, 1634
BstDSI CCRYGG 1 cut(s) 39
BstEII GGTNACC 1 cut(s) 1479
BstF5I GGATG 6 cut(s) 1191, 1351, 1404, 1462, 1480, 1617
BstFNI CGCG 1 cut(s) 41
BstH2I RGCGCY 3 cut(s) 8, 1016, 1628
BstHHI GCGC 4 cut(s) 7, 219, 1015, 1627
BstKTI GATC 6 cut(s) 82, 177, 864, 1246, 1279, 1354
BstMAI GTCTC 4 cut(s) 314, 429, 497, 1414
BstMBI GATC 6 cut(s) 79, 174, 861, 1243, 1276, 1351
BstMWI GCNNNNNNNGC 9 cut(s) 26, 35, 38, 44, 488, 718, 1003, 1012, 1176
BstNI CCWGG 4 cut(s) 149, 162, 1485, 1686
BstPAI GACNNNNGTC 1 cut(s) 141
BstPI GGTNACC 1 cut(s) 1479
BstSCI CCNGG 8 cut(s) 147, 160, 906, 907, 1483, 1597, 1598, 1684
BstSLI GKGCMC 2 cut(s) 1095, 1375
BstUI CGCG 1 cut(s) 41
BstV1I GCAGC 7 cut(s) 16, 29, 368, 580, 583, 724, 984
BstV2I GAAGAC 1 cut(s) 382
BstX2I RGATCY 2 cut(s) 1243, 1351
BstXI CCANNNNNNTGG 3 cut(s) 471, 1008, 1692
BstYI RGATCY 2 cut(s) 1243, 1351
BsuI GTATCC 2 cut(s) 82, 1642
BsuRI GGCC 6 cut(s) 38, 1093, 1138, 1190, 1493, 1672
BtgI CCRYGG 1 cut(s) 39
BtsCI GGATG 6 cut(s) 1191, 1351, 1404, 1462, 1480, 1617
BtsI GCAGTG 2 cut(s) 1013, 1326
BtsIMutI CAGTG 4 cut(s) 1013, 1030, 1146, 1326
BveI ACCTGC 2 cut(s) 487, 1372
CaiI CAGNNNCTG 1 cut(s) 1145
CfoI GCGC 4 cut(s) 7, 219, 1015, 1627
Cfr10I RCCGGY 2 cut(s) 1015, 1182
Cfr13I GGNCC 7 cut(s) 231, 1040, 1091, 1092, 1492, 1604, 1670
Cfr42I CCGCGG 1 cut(s) 42
Cfr9I CCCGGG 2 cut(s) 907, 1598
Csp6I GTAC 3 cut(s) 94, 434, 658
CspAI ACCGGT 1 cut(s) 1182
CviAII CATG 3 cut(s) 471, 622, 1319
CviQI GTAC 3 cut(s) 94, 434, 658
DdeI CTNAG 5 cut(s) 33, 83, 334, 426, 1634
DinI GGCGCC 1 cut(s) 1014
DpnI GATC 6 cut(s) 81, 176, 863, 1245, 1278, 1353
DpnII GATC 6 cut(s) 79, 174, 861, 1243, 1276, 1351
DriI GACNNNNNGTC 1 cut(s) 1718
EaeI YGGCCR 1 cut(s) 1188
Eam1104I CTCTTC 7 cut(s) 317, 591, 963, 1077, 1221, 1418, 1782
Eam1105I GACNNNNNGTC 1 cut(s) 1718
EarI CTCTTC 7 cut(s) 317, 591, 963, 1077, 1221, 1418, 1782
Ecl136II GAGCTC 1 cut(s) 973
Eco130I CCWWGG 1 cut(s) 1001
Eco24I GRGCYC 2 cut(s) 975, 1095
Eco31I GGTCTC 1 cut(s) 314
Eco32I GATATC 1 cut(s) 1737
Eco47I GGWCC 3 cut(s) 231, 1040, 1604
Eco53kI GAGCTC 1 cut(s) 973
Eco57I CTGAAG 1 cut(s) 1058
Eco88I CYCGRG 4 cut(s) 304, 416, 907, 1598
Eco91I GGTNACC 1 cut(s) 1479
EcoICRI GAGCTC 1 cut(s) 973
EcoO109I RGGNCCY 2 cut(s) 1091, 1604
EcoO65I GGTNACC 1 cut(s) 1479
EcoRI GAATTC 1 cut(s) 329
EcoRII CCWGG 4 cut(s) 147, 160, 1483, 1684
EcoRV GATATC 1 cut(s) 1737
EcoT14I CCWWGG 1 cut(s) 1001
EcoT38I GRGCYC 2 cut(s) 975, 1095
EgeI GGCGCC 1 cut(s) 1014
EheI GGCGCC 1 cut(s) 1014
ErhI CCWWGG 1 cut(s) 1001
FaeI CATG 3 cut(s) 474, 625, 1322
FaqI GGGAC 2 cut(s) 446, 890
FatI CATG 3 cut(s) 470, 621, 1318
FbaI TGATCA 1 cut(s) 861
FblI GTMKAC 1 cut(s) 1593
FokI GGATG 6 cut(s) 1178, 1358, 1411, 1449, 1487, 1604
FriOI GRGCYC 2 cut(s) 975, 1095
FspBI CTAG 4 cut(s) 735, 1113, 1163, 1715
GlaI GCGC 4 cut(s) 6, 218, 1014, 1626
GsuI CTGGAG 2 cut(s) 1593, 1668
HaeII RGCGCY 3 cut(s) 8, 1016, 1628
HaeIII GGCC 6 cut(s) 38, 1093, 1138, 1190, 1493, 1672
HapII CCGG 5 cut(s) 291, 908, 1016, 1183, 1599
HhaI GCGC 4 cut(s) 7, 219, 1015, 1627
Hin1I GRCGYC 1 cut(s) 1013
Hin1II CATG 3 cut(s) 474, 625, 1322
Hin6I GCGC 4 cut(s) 5, 217, 1013, 1625
HinP1I GCGC 4 cut(s) 5, 217, 1013, 1625
HincII GTYRAC 1 cut(s) 1576
HindII GTYRAC 1 cut(s) 1576
HindIII AAGCTT 2 cut(s) 678, 1097
HinfI GANTC 6 cut(s) 903, 918, 1268, 1340, 1422, 1506
HpaII CCGG 5 cut(s) 291, 908, 1016, 1183, 1599
HphI GGTGA 1 cut(s) 1473
Hpy166II GTNNAC 3 cut(s) 1043, 1576, 1594
Hpy188I TCNGA 6 cut(s) 235, 262, 429, 673, 1221, 1345
Hpy8I GTNNAC 3 cut(s) 1043, 1576, 1594
Hpy99I CGWCG 5 cut(s) 134, 137, 140, 386, 1266
HpyAV CCTTC 3 cut(s) 610, 1040, 1160
HpyCH4III ACNGT 7 cut(s) 409, 657, 669, 841, 1377, 1438, 1768
HpyCH4IV ACGT 3 cut(s) 183, 223, 439
HpyCH4V TGCA 8 cut(s) 17, 47, 99, 356, 728, 1201, 1326, 1381
HpyF10VI GCNNNNNNNGC 9 cut(s) 26, 35, 38, 44, 488, 718, 1003, 1012, 1176
HpyF3I CTNAG 5 cut(s) 33, 83, 334, 426, 1634
HpySE526I ACGT 3 cut(s) 183, 223, 439
Hsp92I GRCGYC 1 cut(s) 1013
Hsp92II CATG 3 cut(s) 474, 625, 1322
HspAI GCGC 4 cut(s) 5, 217, 1013, 1625
KasI GGCGCC 1 cut(s) 1012
Ksp22I TGATCA 1 cut(s) 861
KspI CCGCGG 1 cut(s) 42
Kzo9I GATC 6 cut(s) 79, 174, 861, 1243, 1276, 1351
LguI GCTCTTC 1 cut(s) 963
LmnI GCTCC 5 cut(s) 25, 709, 978, 1336, 1445
Lsp1109I GCAGC 7 cut(s) 16, 29, 368, 580, 583, 724, 984
LweI GCATC 5 cut(s) 56, 343, 634, 1063, 1471
MaeI CTAG 4 cut(s) 735, 1113, 1163, 1715
MaeII ACGT 3 cut(s) 183, 223, 439
MaeIII GTNAC 5 cut(s) 831, 1025, 1141, 1363, 1479
MalI GATC 6 cut(s) 81, 176, 863, 1245, 1278, 1353
MboI GATC 6 cut(s) 79, 174, 861, 1243, 1276, 1351
MfeI CAATTG 2 cut(s) 51, 963
MflI RGATCY 2 cut(s) 1243, 1351
MhlI GDGCHC 3 cut(s) 975, 1095, 1375
MlsI TGGCCA 1 cut(s) 1190
MluNI TGGCCA 1 cut(s) 1190
Mly113I GGCGCC 1 cut(s) 1013
MlyI GAGTC 4 cut(s) 912, 1349, 1416, 1500
MmeI TCCRAC 4 cut(s) 274, 1255, 1323, 1773
Mox20I TGGCCA 1 cut(s) 1190
MroXI GAANNNNTTC 2 cut(s) 1226, 1310
MscI TGGCCA 1 cut(s) 1190
MseI TTAA 4 cut(s) 450, 807, 947, 1085
MslI CAYNNNNRTG 1 cut(s) 469
Msp20I TGGCCA 1 cut(s) 1190
MspA1I CMGCKG 4 cut(s) 41, 596, 715, 997
MspI CCGG 5 cut(s) 291, 908, 1016, 1183, 1599
MspR9I CCNGG 8 cut(s) 149, 162, 908, 909, 1485, 1599, 1600, 1686
MunI CAATTG 2 cut(s) 51, 963
Mva1269I GAATGC 1 cut(s) 574
MvaI CCWGG 4 cut(s) 149, 162, 1485, 1686
MvnI CGCG 1 cut(s) 41
MwoI GCNNNNNNNGC 9 cut(s) 26, 35, 38, 44, 488, 718, 1003, 1012, 1176
NarI GGCGCC 1 cut(s) 1013
NciI CCSGG 4 cut(s) 908, 909, 1599, 1600
NdeII GATC 6 cut(s) 79, 174, 861, 1243, 1276, 1351
NlaIII CATG 3 cut(s) 474, 625, 1322
NlaIV GGNNCC 6 cut(s) 477, 1014, 1092, 1093, 1605, 1671
NmeAIII GCCGAG 1 cut(s) 1565
NmuCI GTSAC 3 cut(s) 1025, 1141, 1479
PaeR7I CTCGAG 1 cut(s) 416
PciSI GCTCTTC 1 cut(s) 963
PctI GAATGC 1 cut(s) 574
PdmI GAANNNNTTC 2 cut(s) 1226, 1310
PfeI GAWTC 2 cut(s) 918, 1268
PflFI GACNNNGTC 1 cut(s) 386
PflMI CCANNNNNTGG 1 cut(s) 1145
PinAI ACCGGT 1 cut(s) 1182
PleI GAGTC 4 cut(s) 911, 1348, 1416, 1500
PluTI GGCGCC 1 cut(s) 1016
PpsI GAGTC 4 cut(s) 911, 1348, 1416, 1500
Ppu21I YACGTR 1 cut(s) 440
PpuMI RGGWCCY 1 cut(s) 1604
PshAI GACNNNNGTC 1 cut(s) 141
Psp124BI GAGCTC 1 cut(s) 975
Psp1406I AACGTT 1 cut(s) 183
Psp5II RGGWCCY 1 cut(s) 1604
Psp6I CCWGG 4 cut(s) 147, 160, 1483, 1684
PspEI GGTNACC 1 cut(s) 1479
PspGI CCWGG 4 cut(s) 147, 160, 1483, 1684
PspN4I GGNNCC 6 cut(s) 477, 1014, 1092, 1093, 1605, 1671
PspOMI GGGCCC 1 cut(s) 1091
PspPI GGNCC 7 cut(s) 231, 1040, 1091, 1092, 1492, 1604, 1670
PspPPI RGGWCCY 1 cut(s) 1604
PstNI CAGNNNCTG 1 cut(s) 1145
PsuI RGATCY 2 cut(s) 1243, 1351
PsyI GACNNNGTC 1 cut(s) 386
PvuII CAGCTG 2 cut(s) 596, 997
RsaI GTAC 3 cut(s) 95, 435, 659
RsaNI GTAC 3 cut(s) 94, 434, 658
RseI CAYNNNNRTG 1 cut(s) 469
SacI GAGCTC 1 cut(s) 975
SacII CCGCGG 1 cut(s) 42
SapI GCTCTTC 1 cut(s) 963
SaqAI TTAA 4 cut(s) 450, 807, 947, 1085
Sau3AI GATC 6 cut(s) 79, 174, 861, 1243, 1276, 1351
Sau96I GGNCC 7 cut(s) 231, 1040, 1091, 1092, 1492, 1604, 1670
ScaI AGTACT 1 cut(s) 95
SchI GAGTC 4 cut(s) 912, 1349, 1416, 1500
ScrFI CCNGG 8 cut(s) 149, 162, 908, 909, 1485, 1599, 1600, 1686
SduI GDGCHC 3 cut(s) 975, 1095, 1375
SfaNI GCATC 5 cut(s) 56, 343, 634, 1063, 1471
SfoI GGCGCC 1 cut(s) 1014
Sfr274I CTCGAG 1 cut(s) 416
Sfr303I CCGCGG 1 cut(s) 42
SgrBI CCGCGG 1 cut(s) 42
SinI GGWCC 3 cut(s) 231, 1040, 1604
SlaI CTCGAG 1 cut(s) 416
SmaI CCCGGG 2 cut(s) 909, 1600
SmiMI CAYNNNNRTG 1 cut(s) 469
SmlI CTYRAG 5 cut(s) 8, 89, 416, 922, 1417
SmoI CTYRAG 5 cut(s) 8, 89, 416, 922, 1417
SpeI ACTAGT 3 cut(s) 734, 1112, 1714
SsiI CCGC 7 cut(s) 39, 41, 483, 715, 721, 1153, 1426
SspDI GGCGCC 1 cut(s) 1012
SspI AATATT 2 cut(s) 1408, 1773
SspMI CTAG 4 cut(s) 735, 1113, 1163, 1715
SstI GAGCTC 1 cut(s) 975
StyD4I CCNGG 8 cut(s) 147, 160, 906, 907, 1483, 1597, 1598, 1684
StyI CCWWGG 1 cut(s) 1001
TaaI ACNGT 7 cut(s) 409, 657, 669, 841, 1377, 1438, 1768
TaiI ACGT 3 cut(s) 186, 226, 442
TaqI TCGA 5 cut(s) 112, 381, 417, 1236, 1722
TatI WGTACW 1 cut(s) 93
TauI GCSGC 3 cut(s) 41, 485, 1156
TfiI GAWTC 2 cut(s) 918, 1268
Tru1I TTAA 4 cut(s) 450, 807, 947, 1085
Tru9I TTAA 4 cut(s) 450, 807, 947, 1085
TscAI CASTG 4 cut(s) 1013, 1030, 1146, 1333
TseFI GTSAC 3 cut(s) 1025, 1141, 1479
TseI GCWGC 7 cut(s) 17, 29, 356, 568, 571, 712, 997
Tsp45I GTSAC 3 cut(s) 1025, 1141, 1479
TspDTI ATGAA 5 cut(s) 382, 578, 840, 1415, 1797
TspGWI ACGGA 2 cut(s) 1250, 1733
TspMI CCCGGG 2 cut(s) 907, 1598
TspRI CASTG 4 cut(s) 1013, 1030, 1146, 1333
Tth111I GACNNNGTC 1 cut(s) 386
Van91I CCANNNNNTGG 1 cut(s) 1145
VpaK11BI GGWCC 3 cut(s) 231, 1040, 1604
XapI RAATTY 4 cut(s) 329, 989, 1255, 1640
XbaI TCTAGA 1 cut(s) 1162
XhoI CTCGAG 1 cut(s) 416
XmaI CCCGGG 2 cut(s) 907, 1598
XmiI GTMKAC 1 cut(s) 1593
XmnI GAANNNNTTC 2 cut(s) 1226, 1310
XspI CTAG 4 cut(s) 735, 1113, 1163, 1715
ZrmI AGTACT 1 cut(s) 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.