Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0207931 |
| rosa_laevigata | RLG00000003272 RLG00000003274 |
| rosa_multiflora | Rmu_sc0000905.1_g000017 Rmu_sc0006577.1_g000009 Rmu_sc0006577.1_g000012 |
| rosa_roxburghii | Rroxscaffold_3G00251000 |
| rosa_rugosa | Rorug07G0100300 |
| rosa_samantha | Rh7AG233900 Rh7AG236000 Rh7BG229500 Rh7CG249100 Rh7DG239900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 407, 1166 |
| AarI | CACCTGC | 2 cut(s) | 275, 707 |
| Acc36I | ACCTGC | 2 cut(s) | 275, 707 |
| AccB1I | GGYRCC | 2 cut(s) | 350, 782 |
| AccII | CGCG | 3 cut(s) | 611, 872, 1043 |
| AcoI | YGGCCR | 9 cut(s) | 127, 153, 192, 559, 585, 624, 991, 1017, 1056 |
| AcuI | CTGAAG | 5 cut(s) | 53, 215, 647, 917, 1079 |
| AfaI | GTAC | 3 cut(s) | 146, 578, 1010 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 183, 235, 615, 667, 1047, 1099 |
| AgsI | TTSAA | 4 cut(s) | 94, 526, 958, 1177 |
| AjnI | CCWGG | 6 cut(s) | 129, 210, 561, 642, 993, 1074 |
| Alw26I | GTCTC | 1 cut(s) | 571 |
| ApeKI | GCWGC | 4 cut(s) | 120, 552, 984, 1214 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 260, 692, 1124 |
| AspLEI | GCGC | 2 cut(s) | 613, 1045 |
| AspS9I | GGNCC | 3 cut(s) | 168, 600, 1032 |
| AsuHPI | GGTGA | 3 cut(s) | 256, 688, 1120 |
| AsuII | TTCGAA | 3 cut(s) | 362, 794, 1226 |
| AvaII | GGWCC | 3 cut(s) | 168, 600, 1032 |
| BalI | TGGCCA | 3 cut(s) | 194, 626, 1058 |
| BanI | GGYRCC | 2 cut(s) | 350, 782 |
| BanII | GRGCYC | 3 cut(s) | 242, 674, 1106 |
| BauI | CACGAG | 1 cut(s) | 439 |
| BbsI | GAAGAC | 2 cut(s) | 416, 848 |
| BbvI | GCAGC | 4 cut(s) | 107, 539, 971, 1201 |
| BccI | CCATC | 8 cut(s) | 158, 284, 427, 590, 716, 859, 1022, 1148 |
| BceAI | ACGGC | 5 cut(s) | 140, 559, 572, 991, 1004 |
| BciT130I | CCWGG | 6 cut(s) | 131, 212, 563, 644, 995, 1076 |
| BciVI | GTATCC | 3 cut(s) | 169, 601, 1033 |
| BcoDI | GTCTC | 1 cut(s) | 571 |
| BfaI | CTAG | 3 cut(s) | 320, 752, 1184 |
| BfmI | CTRYAG | 2 cut(s) | 418, 850 |
| BfuAI | ACCTGC | 2 cut(s) | 275, 707 |
| BfuI | GTATCC | 3 cut(s) | 169, 601, 1033 |
| Bme1390I | CCNGG | 6 cut(s) | 131, 212, 563, 644, 995, 1076 |
| Bme18I | GGWCC | 3 cut(s) | 168, 600, 1032 |
| BmgT120I | GGNCC | 3 cut(s) | 168, 600, 1032 |
| BmrFI | CCNGG | 6 cut(s) | 131, 212, 563, 644, 995, 1076 |
| BmsI | GCATC | 3 cut(s) | 177, 609, 1041 |
| BpiI | GAAGAC | 2 cut(s) | 416, 848 |
| Bpu14I | TTCGAA | 3 cut(s) | 362, 794, 1226 |
| BsaI | GGTCTC | 1 cut(s) | 571 |
| BsaJI | CCNNGG | 7 cut(s) | 280, 377, 712, 809, 1144, 1240, 1284 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 183, 235, 615, 667, 1047, 1099 |
| BseBI | CCWGG | 6 cut(s) | 131, 212, 563, 644, 995, 1076 |
| BseDI | CCNNGG | 7 cut(s) | 280, 377, 712, 809, 1144, 1240, 1284 |
| BseGI | GGATG | 8 cut(s) | 192, 276, 319, 624, 708, 751, 1056, 1140 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 183, 235, 615, 667, 1047, 1099 |
| BseMII | CTCAG | 3 cut(s) | 212, 644, 1076 |
| BseXI | GCAGC | 4 cut(s) | 107, 539, 971, 1201 |
| Bsh1236I | CGCG | 3 cut(s) | 611, 872, 1043 |
| BshNI | GGYRCC | 2 cut(s) | 350, 782 |
| BsiSI | CCGG | 2 cut(s) | 428, 860 |
| BslFI | GGGAC | 5 cut(s) | 154, 586, 1018, 1119, 1258 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 183, 235, 615, 667, 1047, 1099 |
| BsmAI | GTCTC | 1 cut(s) | 571 |
| BsmFI | GGGAC | 5 cut(s) | 154, 586, 1018, 1119, 1258 |
| BsmI | GAATGC | 3 cut(s) | 370, 802, 1234 |
| Bso31I | GGTCTC | 1 cut(s) | 571 |
| Bsp119I | TTCGAA | 3 cut(s) | 362, 794, 1226 |
| Bsp1286I | GDGCHC | 3 cut(s) | 242, 674, 1106 |
| Bsp19I | CCATGG | 1 cut(s) | 809 |
| BspCNI | CTCAG | 3 cut(s) | 211, 643, 1075 |
| BspFNI | CGCG | 3 cut(s) | 611, 872, 1043 |
| BspMI | ACCTGC | 2 cut(s) | 275, 707 |
| BspT104I | TTCGAA | 3 cut(s) | 362, 794, 1226 |
| BspT107I | GGYRCC | 2 cut(s) | 350, 782 |
| BspTNI | GGTCTC | 1 cut(s) | 571 |
| BssECI | CCNNGG | 7 cut(s) | 280, 377, 712, 809, 1144, 1240, 1284 |
| BssSI | CACGAG | 1 cut(s) | 439 |
| BssT1I | CCWWGG | 6 cut(s) | 280, 712, 809, 1144, 1240, 1284 |
| Bst2BI | CACGAG | 1 cut(s) | 439 |
| Bst2UI | CCWGG | 6 cut(s) | 131, 212, 563, 644, 995, 1076 |
| Bst4CI | ACNGT | 5 cut(s) | 144, 422, 576, 854, 1008 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 187, 619, 1051 |
| BstBI | TTCGAA | 3 cut(s) | 362, 794, 1226 |
| BstC8I | GCNNGC | 3 cut(s) | 192, 624, 1056 |
| BstDEI | CTNAG | 3 cut(s) | 198, 630, 1062 |
| BstDSI | CCRYGG | 2 cut(s) | 377, 809 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 233, 665, 1097 |
| BstF5I | GGATG | 8 cut(s) | 192, 276, 319, 624, 708, 751, 1056, 1140 |
| BstFNI | CGCG | 3 cut(s) | 611, 872, 1043 |
| BstHHI | GCGC | 2 cut(s) | 613, 1045 |
| BstMAI | GTCTC | 1 cut(s) | 571 |
| BstNI | CCWGG | 6 cut(s) | 131, 212, 563, 644, 995, 1076 |
| BstSCI | CCNGG | 6 cut(s) | 129, 210, 561, 642, 993, 1074 |
| BstSFI | CTRYAG | 2 cut(s) | 418, 850 |
| BstUI | CGCG | 3 cut(s) | 611, 872, 1043 |
| BstV1I | GCAGC | 4 cut(s) | 107, 539, 971, 1201 |
| BstV2I | GAAGAC | 2 cut(s) | 416, 848 |
| BsuI | GTATCC | 3 cut(s) | 169, 601, 1033 |
| BtgI | CCRYGG | 2 cut(s) | 377, 809 |
| BtgZI | GCGATG | 2 cut(s) | 446, 878 |
| BtsCI | GGATG | 8 cut(s) | 192, 276, 319, 624, 708, 751, 1056, 1140 |
| BtsIMutI | CAGTG | 2 cut(s) | 135, 999 |
| BveI | ACCTGC | 2 cut(s) | 275, 707 |
| Cac8I | GCNNGC | 3 cut(s) | 192, 624, 1056 |
| CfoI | GCGC | 2 cut(s) | 613, 1045 |
| Cfr13I | GGNCC | 3 cut(s) | 168, 600, 1032 |
| CseI | GACGC | 2 cut(s) | 294, 878 |
| Csp6I | GTAC | 3 cut(s) | 145, 577, 1009 |
| CviAII | CATG | 1 cut(s) | 810 |
| CviQI | GTAC | 3 cut(s) | 145, 577, 1009 |
| DdeI | CTNAG | 3 cut(s) | 198, 630, 1062 |
| EaeI | YGGCCR | 9 cut(s) | 127, 153, 192, 559, 585, 624, 991, 1017, 1056 |
| EciI | GGCGGA | 3 cut(s) | 239, 671, 1103 |
| Eco130I | CCWWGG | 6 cut(s) | 280, 712, 809, 1144, 1240, 1284 |
| Eco24I | GRGCYC | 3 cut(s) | 242, 674, 1106 |
| Eco31I | GGTCTC | 1 cut(s) | 571 |
| Eco32I | GATATC | 3 cut(s) | 337, 769, 1201 |
| Eco47I | GGWCC | 3 cut(s) | 168, 600, 1032 |
| Eco57I | CTGAAG | 5 cut(s) | 53, 215, 647, 917, 1079 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 233, 665, 1097 |
| EcoO109I | RGGNCCY | 3 cut(s) | 168, 600, 1032 |
| EcoRII | CCWGG | 6 cut(s) | 129, 210, 561, 642, 993, 1074 |
| EcoRV | GATATC | 3 cut(s) | 337, 769, 1201 |
| EcoT14I | CCWWGG | 6 cut(s) | 280, 712, 809, 1144, 1240, 1284 |
| EcoT38I | GRGCYC | 3 cut(s) | 242, 674, 1106 |
| ErhI | CCWWGG | 6 cut(s) | 280, 712, 809, 1144, 1240, 1284 |
| FaeI | CATG | 1 cut(s) | 813 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 213, 245, 1077, 1109 |
| FaqI | GGGAC | 5 cut(s) | 154, 586, 1018, 1119, 1258 |
| FatI | CATG | 1 cut(s) | 809 |
| FokI | GGATG | 8 cut(s) | 199, 263, 326, 631, 695, 758, 1063, 1127 |
| FriOI | GRGCYC | 3 cut(s) | 242, 674, 1106 |
| FspBI | CTAG | 3 cut(s) | 320, 752, 1184 |
| GlaI | GCGC | 2 cut(s) | 612, 1044 |
| HapII | CCGG | 2 cut(s) | 428, 860 |
| HgaI | GACGC | 2 cut(s) | 294, 878 |
| HhaI | GCGC | 2 cut(s) | 613, 1045 |
| Hin1II | CATG | 1 cut(s) | 813 |
| Hin6I | GCGC | 2 cut(s) | 611, 1043 |
| HinP1I | GCGC | 2 cut(s) | 611, 1043 |
| HincII | GTYRAC | 1 cut(s) | 55 |
| HindII | GTYRAC | 1 cut(s) | 55 |
| HinfI | GANTC | 3 cut(s) | 256, 688, 1120 |
| HpaII | CCGG | 2 cut(s) | 428, 860 |
| HphI | GGTGA | 3 cut(s) | 256, 688, 1120 |
| Hpy166II | GTNNAC | 1 cut(s) | 55 |
| Hpy188I | TCNGA | 7 cut(s) | 163, 234, 571, 595, 666, 1027, 1098 |
| Hpy188III | TCNNGA | 3 cut(s) | 40, 472, 904 |
| Hpy8I | GTNNAC | 1 cut(s) | 55 |
| Hpy99I | CGWCG | 3 cut(s) | 46, 478, 910 |
| HpyAV | CCTTC | 6 cut(s) | 229, 239, 661, 671, 1093, 1103 |
| HpyCH4III | ACNGT | 5 cut(s) | 144, 422, 576, 854, 1008 |
| HpyCH4V | TGCA | 6 cut(s) | 79, 368, 511, 800, 943, 1232 |
| HpyF3I | CTNAG | 3 cut(s) | 198, 630, 1062 |
| Hsp92II | CATG | 1 cut(s) | 813 |
| HspAI | GCGC | 2 cut(s) | 611, 1043 |
| KflI | GGGWCCC | 3 cut(s) | 168, 600, 1032 |
| LmnI | GCTCC | 2 cut(s) | 677, 1109 |
| Lsp1109I | GCAGC | 4 cut(s) | 107, 539, 971, 1201 |
| LweI | GCATC | 3 cut(s) | 177, 609, 1041 |
| MaeI | CTAG | 3 cut(s) | 320, 752, 1184 |
| MaeIII | GTNAC | 2 cut(s) | 133, 997 |
| MboII | GAAGA | 4 cut(s) | 46, 416, 848, 910 |
| MhlI | GDGCHC | 3 cut(s) | 242, 674, 1106 |
| MlsI | TGGCCA | 3 cut(s) | 194, 626, 1058 |
| MluCI | AATT | 5 cut(s) | 260, 402, 692, 1124, 1274 |
| MluNI | TGGCCA | 3 cut(s) | 194, 626, 1058 |
| MnlI | CCTC | 8 cut(s) | 3, 13, 107, 435, 445, 647, 867, 877 |
| Mox20I | TGGCCA | 3 cut(s) | 194, 626, 1058 |
| MroXI | GAANNNNTTC | 3 cut(s) | 260, 692, 1124 |
| MscI | TGGCCA | 3 cut(s) | 194, 626, 1058 |
| Msp20I | TGGCCA | 3 cut(s) | 194, 626, 1058 |
| MspI | CCGG | 2 cut(s) | 428, 860 |
| MspR9I | CCNGG | 6 cut(s) | 131, 212, 563, 644, 995, 1076 |
| Mva1269I | GAATGC | 3 cut(s) | 370, 802, 1234 |
| MvaI | CCWGG | 6 cut(s) | 131, 212, 563, 644, 995, 1076 |
| MvnI | CGCG | 3 cut(s) | 611, 872, 1043 |
| NcoI | CCATGG | 1 cut(s) | 809 |
| NlaIII | CATG | 1 cut(s) | 813 |
| NmuCI | GTSAC | 2 cut(s) | 133, 997 |
| NspV | TTCGAA | 3 cut(s) | 362, 794, 1226 |
| PaqCI | CACCTGC | 2 cut(s) | 275, 707 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 23, 455, 887 |
| PctI | GAATGC | 3 cut(s) | 370, 802, 1234 |
| PdmI | GAANNNNTTC | 3 cut(s) | 260, 692, 1124 |
| PfeI | GAWTC | 3 cut(s) | 256, 688, 1120 |
| PpuMI | RGGWCCY | 3 cut(s) | 168, 600, 1032 |
| PsiI | TTATAA | 2 cut(s) | 407, 1166 |
| Psp5II | RGGWCCY | 3 cut(s) | 168, 600, 1032 |
| Psp6I | CCWGG | 6 cut(s) | 129, 210, 561, 642, 993, 1074 |
| PspGI | CCWGG | 6 cut(s) | 129, 210, 561, 642, 993, 1074 |
| PspPI | GGNCC | 3 cut(s) | 168, 600, 1032 |
| PspPPI | RGGWCCY | 3 cut(s) | 168, 600, 1032 |
| RsaI | GTAC | 3 cut(s) | 146, 578, 1010 |
| RsaNI | GTAC | 3 cut(s) | 145, 577, 1009 |
| Sau96I | GGNCC | 3 cut(s) | 168, 600, 1032 |
| ScrFI | CCNGG | 6 cut(s) | 131, 212, 563, 644, 995, 1076 |
| SduI | GDGCHC | 3 cut(s) | 242, 674, 1106 |
| SetI | ASST | 9 cut(s) | 135, 231, 269, 567, 663, 701, 999, 1095, 1133 |
| SfaNI | GCATC | 3 cut(s) | 177, 609, 1041 |
| SfcI | CTRYAG | 2 cut(s) | 418, 850 |
| SfuI | TTCGAA | 3 cut(s) | 362, 794, 1226 |
| SinI | GGWCC | 3 cut(s) | 168, 600, 1032 |
| Sse9I | AATT | 5 cut(s) | 260, 402, 692, 1124, 1274 |
| SspMI | CTAG | 3 cut(s) | 320, 752, 1184 |
| StyD4I | CCNGG | 6 cut(s) | 129, 210, 561, 642, 993, 1074 |
| StyI | CCWWGG | 6 cut(s) | 280, 712, 809, 1144, 1240, 1284 |
| TaaI | ACNGT | 5 cut(s) | 144, 422, 576, 854, 1008 |
| TaqI | TCGA | 5 cut(s) | 362, 519, 794, 951, 1226 |
| TasI | AATT | 5 cut(s) | 260, 402, 692, 1124, 1274 |
| TfiI | GAWTC | 3 cut(s) | 256, 688, 1120 |
| TscAI | CASTG | 2 cut(s) | 142, 1006 |
| TseFI | GTSAC | 2 cut(s) | 133, 997 |
| TseI | GCWGC | 4 cut(s) | 120, 552, 984, 1214 |
| Tsp45I | GTSAC | 2 cut(s) | 133, 997 |
| TspRI | CASTG | 2 cut(s) | 142, 1006 |
| VpaK11BI | GGWCC | 3 cut(s) | 168, 600, 1032 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 233, 665, 1097 |
| XmnI | GAANNNNTTC | 3 cut(s) | 260, 692, 1124 |
| XspI | CTAG | 3 cut(s) | 320, 752, 1184 |