Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0010414

Physical Location & Seq

Genomic Coordinates Reverse (-)

49423767 .. 49433010

Gene Structure 9244 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003509

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2310 bp

ATGGAAGACGACGGAGGAGAGAGATCGAGCTTCGTCATCGGTCTCATCGAGAACAGAGCCAAGGAGGTTGGAGTGGCAGCATTCGATTTAAGGTCGGCTTCTCTACATCTATCTCAATATATTGAGACTAGTAGTTCATATCAGAATACAAAAACTTTGCTGCAATTCTACGATCCTATGGTGATTATTGTTTCCCCCAACAAACTGGCACCTGATGGAATGGTTGGAGTTTCAGAATTGGCAGATAGATTTTATGCCACAGTCAAGAAGGTTGTAATGGCTCGTGGTTGCTTTGATGACACTACGGGTGCTGTGTTGATTAAAAATCTAGCAGCCAAGGAACCTTCAGCACTAGGATTGGATACTTATTACAAGCAGTACTATCTCTGCTTGGCCGCTGCAGCAGCTACAATTAAGTGGATAGAAGCAGAGAAAGGGGTCATTGTTACAAACCACTCATTGTCGGTCACTTTTAATGGATCATTTGCCCATTTGAATATCGATGCTACTAGTGTTCAAAATTTGGAAATCATTGACCCGCTTCATTCTACACTGTGGGGTACAAGCAATAAGAAGAGAAGTTTGTTGCATATGCTGAAGACGACAAAAACTTTAGGAGGGTCTAGGCTTCTTCGTGCCAATCTATTGCAGCCTTTAAAAGATATTGAGACTATAAATGCTCGTCTAGATTGCCTGGATGAGCTAATGAGCAACGAACAGCTATTCTTTGGACTCTCTCAGGTTCTGCGCAAATTCCCAAAAGAGAGTGATAGAGTACTTTGTCACTTCTGCTTCAAGCCAATGAAAATTACAAATAAAGTTATGGGTGTTGATAATGCTAGAAAAAGCCAGCTGTTGGTATCAAGCATTATTCTCCTCAAAACTGCTCTAGACGCTTTGCCTTTACTCTCAAGGGCTCTCAAAGATGCAAAAAGTTCTCTTCTTGCTAATGTTTACAAGTCTGTGTGTGAAAATGAGAAATATGCTGCTATTAGGAAAAGGATTGGAGAGGTGATTGATGAAGATGTGCTTCATGCAAGGGTACCTTTTGTAGCCCGCACCCAGCAGTGTTTTGCTGTAAAGGCCGGAATTGATGGACTTTTGGATATTGCACGGAGATCATTTTGTGATACTAGTGAAGCTATACATAATCTTGCTAACAAGTACCGCGAACATTTCAAGTTCCCCAATTTGAAACTCGCATTTAACAATAGGCAAGGTTTTTACTTCAGCATTCCACATAAGAGCATTCAGGGGAAGCTTCCTAGCCAGTTCATTCAGGTGTTGAAACACGGGAACAATATACATTGCTCAACTTTGGAGCTTGCTTCTCTAAACGTTAGAAATAAGTCTGCAGCTGCAGAATGCTTCCTACGGACTGAAGTTTGCCTGGAAGAATTAGTAGACGCCATACGAGAGGATGTTTCTGCACTCACATTACTTGCAGAGGCCTTGTGCCTTCTAGATATGATTGTTAACTCATTTGCACATACCGTTTCCAATAAGCCTGCTGATCATTATACTAGACCAGAATTTACAGATGATGGCCCAATGGCAATTGAAGCATCAAACATGGTGCTGATTGTGGGCCCAAACATGAGTGGAAAGAGCACTTATCTTCAGCAAGTATGTCTTATAGTTATTCTTGCTCAGATCGGTTGTTATGTTCCTGCTCGCTTCTCAACTTTGAGGGTTGTTGATCGGATATTTACAAGGATGGGTACAGTGGACAATCTTGAATCCAACTCTAGTACGTTCATGACAGAAATGAAAGAAACAGCTTTCATCATGCAAAATGTTTCCCAAAGGAGTCTGGTTGTCATGGATGAACTTGGGAGGGCTACATCTTCCTCTGATGGATTTGCAATTGCATGGAGCTGCTGCGAACATTTGTTATCACTGAAAGCGTATACTATATTTGCTACTCATTTGGAGAACCTCTCCGAATTAGTAACTGTCTATCCAAATGTGAACATACTTCACTTCAATGTTGACATTAAAAATAACCGTCTAGATTTCAAGTTTCAACTCAAGGAAGGACCAAGACATGTTCCACATTATGGGCTTCTATTAGCAGAAGTGGCAGGATTACCAAGCTCGGTGACTGAGACAGCCAGAAACATCACATCCAGGATCACAGAAAAGGAAGTGAAGAGGATGGAAGTAAACTGCCTGCGATATCATCCAATCCAGATGGCTTACCATGTTGCTCAGCGCCTCATATGTTTGAAATATTCCAGCCAGGATGAGGATTCAATCAGAGAAGCACTGCATAACCTGAAAGAGAGCTACATTCATGGCAGGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000795 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006298 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0008094 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022414 GO:0022607 GO:0030983 GO:0031974 GO:0031981 GO:0033554 GO:0034641 GO:0035825 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0046483 GO:0048285 GO:0050896 GO:0051026 GO:0051276 GO:0051321 GO:0051716 GO:0061982 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098813 GO:0099086 GO:0140013 GO:1901360 GO:1901363 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MutS_III MutS_IV MutS_V

Protein Analysis

770

Amino Acids

85.98

Weight (kDa)

8.16

Isoelectric Point (pI)

41.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MutS_III	PF05192	171 - 492	2.6e-25	MutS domain III
MutS_IV	PF05190	363 - 452	2e-11	MutS family domain IV
MutS_V	PF00488	527 - 712	1.7e-67	MutS domain V

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010414)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17380 AT4G17380
fragaria_vesca	FvH4_5g19230 FvH4_5g19230
malus_domestica	MD04G1062200.v1.1
prunus_persica	Prupe.5G066100_v2.0.a1 Prupe.5G066100_v2.0.a1
pyrus_communis	pycom04g05580
rosa_chinensis	RchiOBHm_Chr7g0203731
rosa_laevigata	RLG00000003509
rosa_multiflora	Rmu_sc0001714.1_g000006 Rmu_sc0005354.1_g000001
rosa_roxburghii	Rroxscaffold_3G00253590
rosa_rugosa	Rorug07G0078500 Rorug07G0078600 Rorug07G0078700
rosa_samantha	Rh7AG208200 Rh7BG207200 Rh7CG220400 Rh7DG215100
rosa_wichuraiana	Rw7G018130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	749
Acc65I	GGTACC	1 cut(s)	1042
AccB1I	GGYRCC	2 cut(s)	208, 1042
AccB7I	CCANNNNNTGG	2 cut(s)	856, 2060
AccI	GTMKAC	2 cut(s)	1404, 1910
AccII	CGCG	1 cut(s)	1170
AciI	CCGC	4 cut(s)	396, 539, 1057, 1168
AclI	AACGTT	1 cut(s)	1338
AclWI	GGATC	3 cut(s)	167, 487, 2141
AcoI	YGGCCR	1 cut(s)	393
AcsI	RAATTY	3 cut(s)	520, 752, 1532
AcuI	CTGAAG	5 cut(s)	330, 617, 1213, 1401, 1604
AcyI	GRCGYC	1 cut(s)	1407
AfaI	GTAC	7 cut(s)	380, 562, 777, 1044, 1166, 1723, 1753
AfiI	CCNNNNNNNGG	3 cut(s)	856, 2060, 2248
AflIII	ACRYGT	1 cut(s)	2047
AhlI	ACTAGT	3 cut(s)	128, 509, 1133
AjnI	CCWGG	4 cut(s)	693, 1389, 2129, 2241
Alw21I	GWGCWC	1 cut(s)	1613
Alw26I	GTCTC	4 cut(s)	47, 119, 662, 2102
AlwI	GGATC	3 cut(s)	167, 487, 2141
AlwNI	CAGNNNCTG	1 cut(s)	745
AoxI	GGCC	5 cut(s)	393, 1083, 1449, 1546, 1588
ApaI	GGGCCC	1 cut(s)	1592
ApoI	RAATTY	3 cut(s)	520, 752, 1532
Asp718I	GGTACC	1 cut(s)	1042
AspLEI	GCGC	2 cut(s)	750, 2217
AspS9I	GGNCC	4 cut(s)	1547, 1588, 1589, 2039
AsuHPI	GGTGA	3 cut(s)	193, 1024, 2113
AvaII	GGWCC	1 cut(s)	2039
BaeGI	GKGCMC	1 cut(s)	1592
BanI	GGYRCC	2 cut(s)	208, 1042
BanII	GRGCYC	2 cut(s)	919, 1592
BauI	CACGAG	1 cut(s)	282
BbsI	GAAGAC	2 cut(s)	12, 605
Bbv12I	GWGCWC	1 cut(s)	1613
BccI	CCATC	7 cut(s)	209, 1088, 1538, 1711, 1850, 2152, 2188
BciT130I	CCWGG	4 cut(s)	695, 1391, 2131, 2243
BciVI	GTATCC	1 cut(s)	355
BclI	TGATCA	1 cut(s)	1513
BcoDI	GTCTC	4 cut(s)	47, 119, 662, 2102
BcuI	ACTAGT	3 cut(s)	128, 509, 1133
BfmI	CTRYAG	3 cut(s)	399, 1353, 1359
BfoI	RGCGCY	1 cut(s)	2218
BfuI	GTATCC	1 cut(s)	355
BlpI	GCTNAGC	1 cut(s)	2211
BmcAI	AGTACT	2 cut(s)	380, 777
Bme1390I	CCNGG	4 cut(s)	695, 1391, 2131, 2243
Bme18I	GGWCC	1 cut(s)	2039
BmgT120I	GGNCC	4 cut(s)	1547, 1588, 1589, 2039
BmiI	GGNNCC	4 cut(s)	210, 342, 1044, 1590
BmrFI	CCNGG	4 cut(s)	695, 1391, 2131, 2243
BmsI	GCATC	3 cut(s)	493, 916, 1574
BpiI	GAAGAC	2 cut(s)	12, 605
BplI	GAGNNNNNCTC	2 cut(s)	1925, 1957
Bpu1102I	GCTNAGC	1 cut(s)	2211
BpuEI	CTTGAG	2 cut(s)	895, 2015
Bsa29I	ATCGAT	1 cut(s)	501
BsaHI	GRCGYC	1 cut(s)	1407
BsaI	GGTCTC	1 cut(s)	47
BsaJI	CCNNGG	2 cut(s)	60, 336
Bsc4I	CCNNNNNNNGG	3 cut(s)	856, 2060, 2248
Bse1I	ACTGG	2 cut(s)	210, 1270
Bse3DI	GCAATG	1 cut(s)	1306
BseBI	CCWGG	4 cut(s)	695, 1391, 2131, 2243
BseCI	ATCGAT	1 cut(s)	501
BseDI	CCNNGG	2 cut(s)	60, 336
BseGI	GGATG	8 cut(s)	703, 1426, 1722, 1831, 2126, 2163, 2182, 2251
BseLI	CCNNNNNNNGG	3 cut(s)	856, 2060, 2248
BseMI	GCAATG	1 cut(s)	1306
BseMII	CTCAG	4 cut(s)	752, 1664, 2097, 2225
BseNI	ACTGG	2 cut(s)	210, 1270
BseRI	GAGGAG	2 cut(s)	30, 866
BseSI	GKGCMC	1 cut(s)	1592
BseYI	CCCAGC	1 cut(s)	1062
BsgI	GTGCAG	1 cut(s)	1413
Bsh1236I	CGCG	1 cut(s)	1170
BshFI	GGCC	5 cut(s)	395, 1085, 1451, 1548, 1590
BshNI	GGYRCC	2 cut(s)	208, 1042
BshVI	ATCGAT	1 cut(s)	501
BsiHKAI	GWGCWC	1 cut(s)	1613
BsiSI	CCGG	1 cut(s)	1086
BslI	CCNNNNNNNGG	3 cut(s)	856, 2060, 2248
BsmAI	GTCTC	4 cut(s)	47, 119, 662, 2102
BsmI	GAATGC	4 cut(s)	80, 1233, 1248, 1370
BsnI	GGCC	5 cut(s)	395, 1085, 1451, 1548, 1590
Bso31I	GGTCTC	1 cut(s)	47
Bsp120I	GGGCCC	1 cut(s)	1588
Bsp1286I	GDGCHC	3 cut(s)	919, 1592, 1613
Bsp143I	GATC	8 cut(s)	23, 172, 479, 1118, 1513, 1653, 1699, 2133
Bsp1720I	GCTNAGC	1 cut(s)	2211
BspACI	CCGC	4 cut(s)	396, 539, 1057, 1168
BspANI	GGCC	5 cut(s)	395, 1085, 1451, 1548, 1590
BspCNI	CTCAG	4 cut(s)	751, 1663, 2098, 2224
BspDI	ATCGAT	1 cut(s)	501
BspFNI	CGCG	1 cut(s)	1170
BspHI	TCATGA	1 cut(s)	1758
BspLI	GGNNCC	4 cut(s)	210, 342, 1044, 1590
BspMAI	CTGCAG	3 cut(s)	403, 1357, 1363
BspPI	GGATC	3 cut(s)	167, 487, 2141
BspT107I	GGYRCC	2 cut(s)	208, 1042
BspTNI	GGTCTC	1 cut(s)	47
BsrDI	GCAATG	1 cut(s)	1306
BsrI	ACTGG	2 cut(s)	210, 1270
BssECI	CCNNGG	2 cut(s)	60, 336
BssMI	GATC	8 cut(s)	23, 172, 479, 1118, 1513, 1653, 1699, 2133
BssNAI	GTATAC	1 cut(s)	1911
BssNI	GRCGYC	1 cut(s)	1407
BssSI	CACGAG	1 cut(s)	282
BssT1I	CCWWGG	2 cut(s)	60, 336
Bst1107I	GTATAC	1 cut(s)	1911
Bst2BI	CACGAG	1 cut(s)	282
Bst2UI	CCWGG	4 cut(s)	695, 1391, 2131, 2243
Bst4CI	ACNGT	6 cut(s)	262, 555, 1495, 1726, 1957, 2009
Bst6I	CTCTTC	3 cut(s)	569, 945, 2147
BstACI	GRCGYC	1 cut(s)	1407
BstC8I	GCNNGC	7 cut(s)	851, 1057, 1326, 1509, 1675, 2174, 2303
BstDEI	CTNAG	4 cut(s)	738, 1650, 2106, 2211
BstF5I	GGATG	8 cut(s)	703, 1426, 1722, 1831, 2126, 2163, 2182, 2251
BstFNI	CGCG	1 cut(s)	1170
BstH2I	RGCGCY	1 cut(s)	2218
BstHHI	GCGC	2 cut(s)	750, 2217
BstKTI	GATC	8 cut(s)	26, 175, 482, 1121, 1516, 1656, 1702, 2136
BstMAI	GTCTC	4 cut(s)	47, 119, 662, 2102
BstMBI	GATC	8 cut(s)	23, 172, 479, 1118, 1513, 1653, 1699, 2133
BstMWI	GCNNNNNNNGC	6 cut(s)	401, 404, 893, 1082, 1562, 2081
BstNI	CCWGG	4 cut(s)	695, 1391, 2131, 2243
BstNSI	RCATGY	1 cut(s)	2051
BstSCI	CCNGG	4 cut(s)	693, 1389, 2129, 2241
BstSFI	CTRYAG	3 cut(s)	399, 1353, 1359
BstSLI	GKGCMC	1 cut(s)	1592
BstUI	CGCG	1 cut(s)	1170
BstV2I	GAAGAC	2 cut(s)	12, 605
BstXI	CCANNNNNNTGG	1 cut(s)	205
BstZ17I	GTATAC	1 cut(s)	1911
Bsu15I	ATCGAT	1 cut(s)	501
BsuI	GTATCC	1 cut(s)	355
BsuRI	GGCC	5 cut(s)	395, 1085, 1451, 1548, 1590
BsuTUI	ATCGAT	1 cut(s)	501
BtsCI	GGATG	8 cut(s)	703, 1426, 1722, 1831, 2126, 2163, 2182, 2251
BtsI	GCAGTG	2 cut(s)	1073, 2267
BtsIMutI	CAGTG	5 cut(s)	551, 1073, 1731, 1898, 2267
Cac8I	GCNNGC	7 cut(s)	851, 1057, 1326, 1509, 1675, 2174, 2303
CaiI	CAGNNNCTG	1 cut(s)	745
CciI	TCATGA	1 cut(s)	1758
CfoI	GCGC	2 cut(s)	750, 2217
Cfr13I	GGNCC	4 cut(s)	1547, 1588, 1589, 2039
ClaI	ATCGAT	1 cut(s)	501
CseI	GACGC	2 cut(s)	902, 1415
Csp6I	GTAC	7 cut(s)	379, 561, 776, 1043, 1165, 1722, 1752
CviQI	GTAC	7 cut(s)	379, 561, 776, 1043, 1165, 1722, 1752
DdeI	CTNAG	4 cut(s)	738, 1650, 2106, 2211
DpnI	GATC	8 cut(s)	25, 174, 481, 1120, 1515, 1655, 1701, 2135
DpnII	GATC	8 cut(s)	23, 172, 479, 1118, 1513, 1653, 1699, 2133
DraI	TTTAAA	1 cut(s)	657
EaeI	YGGCCR	1 cut(s)	393
Eam1104I	CTCTTC	3 cut(s)	569, 945, 2147
EarI	CTCTTC	3 cut(s)	569, 945, 2147
Eco130I	CCWWGG	2 cut(s)	60, 336
Eco147I	AGGCCT	1 cut(s)	1451
Eco24I	GRGCYC	2 cut(s)	919, 1592
Eco31I	GGTCTC	1 cut(s)	47
Eco32I	GATATC	1 cut(s)	2180
Eco47I	GGWCC	1 cut(s)	2039
Eco57I	CTGAAG	5 cut(s)	330, 617, 1213, 1401, 1604
EcoRII	CCWGG	4 cut(s)	693, 1389, 2129, 2241
EcoRV	GATATC	1 cut(s)	2180
EcoT14I	CCWWGG	2 cut(s)	60, 336
EcoT38I	GRGCYC	2 cut(s)	919, 1592
ErhI	CCWWGG	2 cut(s)	60, 336
FalI	AAGNNNNNCTT	8 cut(s)	82, 114, 1014, 1046, 1030, 1062, 1617, 1649
FauI	CCCGC	2 cut(s)	546, 1064
FauNDI	CATATG	2 cut(s)	591, 2222
FbaI	TGATCA	1 cut(s)	1513
FblI	GTMKAC	2 cut(s)	1404, 1910
FokI	GGATG	8 cut(s)	710, 1433, 1729, 1838, 2113, 2169, 2170, 2258
FriOI	GRGCYC	2 cut(s)	919, 1592
FspI	TGCGCA	1 cut(s)	749
GlaI	GCGC	2 cut(s)	749, 2216
GsaI	CCCAGC	1 cut(s)	1066
HaeII	RGCGCY	1 cut(s)	2218
HaeIII	GGCC	5 cut(s)	395, 1085, 1451, 1548, 1590
HapII	CCGG	1 cut(s)	1086
HgaI	GACGC	2 cut(s)	902, 1415
HhaI	GCGC	2 cut(s)	750, 2217
Hin1I	GRCGYC	1 cut(s)	1407
Hin6I	GCGC	2 cut(s)	748, 2215
HinP1I	GCGC	2 cut(s)	748, 2215
HincII	GTYRAC	2 cut(s)	1477, 1993
HindII	GTYRAC	2 cut(s)	1477, 1993
HindIII	AAGCTT	1 cut(s)	1259
HinfI	GANTC	4 cut(s)	732, 1739, 1810, 2252
HpaI	GTTAAC	1 cut(s)	1477
HpaII	CCGG	1 cut(s)	1086
HphI	GGTGA	3 cut(s)	193, 1024, 2113
Hpy166II	GTNNAC	8 cut(s)	955, 1405, 1477, 1729, 1911, 1972, 1993, 2167
Hpy188I	TCNGA	7 cut(s)	144, 235, 1653, 1704, 1855, 1945, 2261
Hpy188III	TCNNGA	9 cut(s)	49, 265, 686, 890, 1463, 1736, 1759, 2012, 2191
Hpy8I	GTNNAC	8 cut(s)	955, 1405, 1477, 1729, 1911, 1972, 1993, 2167
Hpy99I	CGWCG	1 cut(s)	14
HpyAV	CCTTC	4 cut(s)	262, 354, 1469, 2030
HpyCH4III	ACNGT	6 cut(s)	262, 555, 1495, 1726, 1957, 2009
HpyCH4IV	ACGT	2 cut(s)	1338, 1754
HpyF10VI	GCNNNNNNNGC	6 cut(s)	401, 404, 893, 1082, 1562, 2081
HpyF3I	CTNAG	4 cut(s)	738, 1650, 2106, 2211
HpySE526I	ACGT	2 cut(s)	1338, 1754
Hsp92I	GRCGYC	1 cut(s)	1407
HspAI	GCGC	2 cut(s)	748, 2215
KpnI	GGTACC	1 cut(s)	1046
Ksp22I	TGATCA	1 cut(s)	1513
KspAI	GTTAAC	1 cut(s)	1477
Kzo9I	GATC	8 cut(s)	23, 172, 479, 1118, 1513, 1653, 1699, 2133
LmnI	GCTCC	2 cut(s)	1321, 1875
LweI	GCATC	3 cut(s)	493, 916, 1574
MaeII	ACGT	2 cut(s)	1338, 1754
MaeIII	GTNAC	5 cut(s)	445, 466, 782, 1951, 2101
MalI	GATC	8 cut(s)	25, 174, 481, 1120, 1515, 1655, 1701, 2135
MboI	GATC	8 cut(s)	23, 172, 479, 1118, 1513, 1653, 1699, 2133
MfeI	CAATTG	2 cut(s)	1557, 1866
MhlI	GDGCHC	3 cut(s)	919, 1592, 1613
MlyI	GAGTC	2 cut(s)	726, 1819
MmeI	TCCRAC	3 cut(s)	49, 205, 1767
MseI	TTAA	8 cut(s)	89, 321, 414, 474, 656, 1206, 1476, 1998
MslI	CAYNNNNRTG	2 cut(s)	1280, 1986
MspA1I	CMGCKG	3 cut(s)	398, 853, 1358
MspI	CCGG	1 cut(s)	1086
MspR9I	CCNGG	4 cut(s)	695, 1391, 2131, 2243
MunI	CAATTG	2 cut(s)	1557, 1866
Mva1269I	GAATGC	4 cut(s)	80, 1233, 1248, 1370
MvaI	CCWGG	4 cut(s)	695, 1391, 2131, 2243
MvnI	CGCG	1 cut(s)	1170
MwoI	GCNNNNNNNGC	6 cut(s)	401, 404, 893, 1082, 1562, 2081
NdeI	CATATG	2 cut(s)	591, 2222
NdeII	GATC	8 cut(s)	23, 172, 479, 1118, 1513, 1653, 1699, 2133
NlaIV	GGNNCC	4 cut(s)	210, 342, 1044, 1590
NmuCI	GTSAC	3 cut(s)	466, 782, 2101
NsbI	TGCGCA	1 cut(s)	749
NspI	RCATGY	1 cut(s)	2051
PagI	TCATGA	1 cut(s)	1758
PceI	AGGCCT	1 cut(s)	1451
PciI	ACATGT	1 cut(s)	2047
PcsI	WCGNNNNNNNCGW	1 cut(s)	45
PctI	GAATGC	4 cut(s)	80, 1233, 1248, 1370
PfeI	GAWTC	2 cut(s)	1739, 2252
PflMI	CCANNNNNTGG	2 cut(s)	856, 2060
PfoI	TCCNGGA	1 cut(s)	2129
PleI	GAGTC	2 cut(s)	726, 1818
PpsI	GAGTC	2 cut(s)	726, 1818
PscI	ACATGT	1 cut(s)	2047
Psp1406I	AACGTT	1 cut(s)	1338
Psp6I	CCWGG	4 cut(s)	693, 1389, 2129, 2241
PspFI	CCCAGC	1 cut(s)	1062
PspGI	CCWGG	4 cut(s)	693, 1389, 2129, 2241
PspN4I	GGNNCC	4 cut(s)	210, 342, 1044, 1590
PspOMI	GGGCCC	1 cut(s)	1588
PspPI	GGNCC	4 cut(s)	1547, 1588, 1589, 2039
PstI	CTGCAG	3 cut(s)	403, 1357, 1363
PstNI	CAGNNNCTG	1 cut(s)	745
PvuII	CAGCTG	2 cut(s)	853, 1358
RsaI	GTAC	7 cut(s)	380, 562, 777, 1044, 1166, 1723, 1753
RsaNI	GTAC	7 cut(s)	379, 561, 776, 1043, 1165, 1722, 1752
RseI	CAYNNNNRTG	2 cut(s)	1280, 1986
SaqAI	TTAA	8 cut(s)	89, 321, 414, 474, 656, 1206, 1476, 1998
Sau3AI	GATC	8 cut(s)	23, 172, 479, 1118, 1513, 1653, 1699, 2133
Sau96I	GGNCC	4 cut(s)	1547, 1588, 1589, 2039
ScaI	AGTACT	2 cut(s)	380, 777
SchI	GAGTC	2 cut(s)	726, 1819
ScrFI	CCNGG	4 cut(s)	695, 1391, 2131, 2243
SduI	GDGCHC	3 cut(s)	919, 1592, 1613
SfaNI	GCATC	3 cut(s)	493, 916, 1574
SfcI	CTRYAG	3 cut(s)	399, 1353, 1359
SinI	GGWCC	1 cut(s)	2039
SmiMI	CAYNNNNRTG	2 cut(s)	1280, 1986
SmlI	CTYRAG	2 cut(s)	910, 2030
SmoI	CTYRAG	2 cut(s)	910, 2030
SpeI	ACTAGT	3 cut(s)	128, 509, 1133
SseBI	AGGCCT	1 cut(s)	1451
SsiI	CCGC	4 cut(s)	396, 539, 1057, 1168
SspI	AATATT	1 cut(s)	2234
StuI	AGGCCT	1 cut(s)	1451
StyD4I	CCNGG	4 cut(s)	693, 1389, 2129, 2241
StyI	CCWWGG	2 cut(s)	60, 336
TaaI	ACNGT	6 cut(s)	262, 555, 1495, 1726, 1957, 2009
TaiI	ACGT	2 cut(s)	1341, 1757
TaqI	TCGA	4 cut(s)	26, 48, 84, 501
TaqII	GACCGA	2 cut(s)	29, 454
TatI	WGTACW	2 cut(s)	378, 775
TauI	GCSGC	1 cut(s)	398
TfiI	GAWTC	2 cut(s)	1739, 2252
Tru1I	TTAA	8 cut(s)	89, 321, 414, 474, 656, 1206, 1476, 1998
Tru9I	TTAA	8 cut(s)	89, 321, 414, 474, 656, 1206, 1476, 1998
TscAI	CASTG	5 cut(s)	558, 1073, 1731, 1905, 2274
TseFI	GTSAC	3 cut(s)	466, 782, 2101
Tsp45I	GTSAC	3 cut(s)	466, 782, 2101
TspGWI	ACGGA	3 cut(s)	27, 1129, 1390
TspRI	CASTG	5 cut(s)	558, 1073, 1731, 1905, 2274
Van91I	CCANNNNNTGG	2 cut(s)	856, 2060
VpaK11BI	GGWCC	1 cut(s)	2039
XapI	RAATTY	3 cut(s)	520, 752, 1532
XbaI	TCTAGA	4 cut(s)	685, 889, 1462, 2011
XceI	RCATGY	1 cut(s)	2051
XmiI	GTMKAC	2 cut(s)	1404, 1910
ZrmI	AGTACT	2 cut(s)	380, 777

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.