DNA mismatch repair protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17380 AT4G17380 |
| fragaria_vesca | FvH4_5g19230 FvH4_5g19230 |
| malus_domestica | MD04G1062200.v1.1 |
| prunus_persica | Prupe.5G066100_v2.0.a1 Prupe.5G066100_v2.0.a1 |
| pyrus_communis | pycom04g05580 |
| rosa_chinensis | RchiOBHm_Chr7g0203731 |
| rosa_laevigata | RLG00000003509 |
| rosa_multiflora | Rmu_sc0001714.1_g000006 Rmu_sc0005354.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00253590 |
| rosa_rugosa | Rorug07G0078500 Rorug07G0078600 Rorug07G0078700 |
| rosa_samantha | Rh7AG208200 Rh7BG207200 Rh7CG220400 Rh7DG215100 |
| rosa_wichuraiana | Rw7G018130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 656 |
| Acc65I | GGTACC | 1 cut(s) | 949 |
| AccB1I | GGYRCC | 2 cut(s) | 208, 949 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 763 |
| AccI | GTMKAC | 1 cut(s) | 1344 |
| AciI | CCGC | 5 cut(s) | 242, 396, 446, 964, 1920 |
| AclI | AACGTT | 1 cut(s) | 1278 |
| AclWI | GGATC | 1 cut(s) | 167 |
| AcoI | YGGCCR | 1 cut(s) | 393 |
| AcsI | RAATTY | 4 cut(s) | 325, 427, 659, 1472 |
| AcuI | CTGAAG | 5 cut(s) | 330, 524, 1153, 1341, 1613 |
| AcyI | GRCGYC | 1 cut(s) | 1347 |
| AfaI | GTAC | 7 cut(s) | 380, 469, 684, 951, 1106, 1732, 1762 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 763, 1867 |
| AgsI | TTSAA | 9 cut(s) | 425, 703, 1120, 1135, 1228, 1502, 1748, 1849, 1875 |
| AhlI | ACTAGT | 2 cut(s) | 128, 1040 |
| AjnI | CCWGG | 3 cut(s) | 600, 1329, 1860 |
| Alw21I | GWGCWC | 1 cut(s) | 1622 |
| Alw26I | GTCTC | 4 cut(s) | 47, 119, 569, 1841 |
| AlwI | GGATC | 1 cut(s) | 167 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 652 |
| AoxI | GGCC | 5 cut(s) | 393, 990, 1389, 1486, 1597 |
| ApaI | GGGCCC | 1 cut(s) | 1601 |
| ApoI | RAATTY | 4 cut(s) | 325, 427, 659, 1472 |
| Asp718I | GGTACC | 1 cut(s) | 949 |
| AspLEI | GCGC | 1 cut(s) | 657 |
| AspS9I | GGNCC | 3 cut(s) | 1487, 1597, 1598 |
| AsuHPI | GGTGA | 2 cut(s) | 193, 931 |
| BaeGI | GKGCMC | 1 cut(s) | 1601 |
| BanI | GGYRCC | 2 cut(s) | 208, 949 |
| BanII | GRGCYC | 2 cut(s) | 826, 1601 |
| BauI | CACGAG | 1 cut(s) | 282 |
| BbsI | GAAGAC | 3 cut(s) | 12, 512, 1516 |
| Bbv12I | GWGCWC | 1 cut(s) | 1622 |
| BccI | CCATC | 7 cut(s) | 209, 214, 995, 1478, 1720, 1771, 1807 |
| BciT130I | CCWGG | 3 cut(s) | 602, 1331, 1862 |
| BciVI | GTATCC | 1 cut(s) | 355 |
| BclI | TGATCA | 1 cut(s) | 1453 |
| BcoDI | GTCTC | 4 cut(s) | 47, 119, 569, 1841 |
| BcuI | ACTAGT | 2 cut(s) | 128, 1040 |
| BfmI | CTRYAG | 4 cut(s) | 399, 519, 1293, 1299 |
| BfuI | GTATCC | 1 cut(s) | 355 |
| BlpI | GCTNAGC | 1 cut(s) | 1830 |
| BmcAI | AGTACT | 2 cut(s) | 380, 684 |
| Bme1390I | CCNGG | 3 cut(s) | 602, 1331, 1862 |
| BmgT120I | GGNCC | 3 cut(s) | 1487, 1597, 1598 |
| BmiI | GGNNCC | 4 cut(s) | 210, 342, 951, 1599 |
| BmrFI | CCNGG | 3 cut(s) | 602, 1331, 1862 |
| BmsI | GCATC | 2 cut(s) | 823, 1583 |
| BpiI | GAAGAC | 3 cut(s) | 12, 512, 1516 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1830 |
| BpuEI | CTTGAG | 2 cut(s) | 802, 1544 |
| BsaHI | GRCGYC | 1 cut(s) | 1347 |
| BsaI | GGTCTC | 1 cut(s) | 47 |
| BsaJI | CCNNGG | 2 cut(s) | 60, 336 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 763, 1867 |
| Bse1I | ACTGG | 2 cut(s) | 210, 1210 |
| Bse3DI | GCAATG | 2 cut(s) | 1246, 1893 |
| BseBI | CCWGG | 3 cut(s) | 602, 1331, 1862 |
| BseDI | CCNNGG | 2 cut(s) | 60, 336 |
| BseGI | GGATG | 7 cut(s) | 225, 610, 1366, 1731, 1782, 1801, 1870 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 763, 1867 |
| BseMI | GCAATG | 2 cut(s) | 1246, 1893 |
| BseMII | CTCAG | 3 cut(s) | 659, 1673, 1844 |
| BseNI | ACTGG | 2 cut(s) | 210, 1210 |
| BseRI | GAGGAG | 2 cut(s) | 30, 773 |
| BseSI | GKGCMC | 1 cut(s) | 1601 |
| BseYI | CCCAGC | 1 cut(s) | 969 |
| BshFI | GGCC | 5 cut(s) | 395, 992, 1391, 1488, 1599 |
| BshNI | GGYRCC | 2 cut(s) | 208, 949 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1622 |
| BsiSI | CCGG | 1 cut(s) | 993 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 763, 1867 |
| BsmAI | GTCTC | 4 cut(s) | 47, 119, 569, 1841 |
| BsmBI | CGTCTC | 1 cut(s) | 1841 |
| BsmI | GAATGC | 3 cut(s) | 80, 1173, 1310 |
| BsnI | GGCC | 5 cut(s) | 395, 992, 1391, 1488, 1599 |
| Bso31I | GGTCTC | 1 cut(s) | 47 |
| Bsp120I | GGGCCC | 1 cut(s) | 1597 |
| Bsp1286I | GDGCHC | 3 cut(s) | 826, 1601, 1622 |
| Bsp143I | GATC | 6 cut(s) | 23, 172, 1025, 1453, 1662, 1708 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1830 |
| BspACI | CCGC | 5 cut(s) | 242, 396, 446, 964, 1920 |
| BspANI | GGCC | 5 cut(s) | 395, 992, 1391, 1488, 1599 |
| BspCNI | CTCAG | 3 cut(s) | 658, 1672, 1843 |
| BspLI | GGNNCC | 4 cut(s) | 210, 342, 951, 1599 |
| BspMAI | CTGCAG | 3 cut(s) | 403, 1297, 1303 |
| BspPI | GGATC | 1 cut(s) | 167 |
| BspT107I | GGYRCC | 2 cut(s) | 208, 949 |
| BspTNI | GGTCTC | 1 cut(s) | 47 |
| BsrDI | GCAATG | 2 cut(s) | 1246, 1893 |
| BsrI | ACTGG | 2 cut(s) | 210, 1210 |
| BssECI | CCNNGG | 2 cut(s) | 60, 336 |
| BssMI | GATC | 6 cut(s) | 23, 172, 1025, 1453, 1662, 1708 |
| BssNI | GRCGYC | 1 cut(s) | 1347 |
| BssSI | CACGAG | 1 cut(s) | 282 |
| BssT1I | CCWWGG | 2 cut(s) | 60, 336 |
| Bst2BI | CACGAG | 1 cut(s) | 282 |
| Bst2UI | CCWGG | 3 cut(s) | 602, 1331, 1862 |
| Bst4CI | ACNGT | 4 cut(s) | 262, 462, 1109, 1735 |
| Bst6I | CTCTTC | 3 cut(s) | 476, 852, 1766 |
| BstACI | GRCGYC | 1 cut(s) | 1347 |
| BstC8I | GCNNGC | 7 cut(s) | 758, 964, 1266, 1449, 1684, 1793, 1922 |
| BstDEI | CTNAG | 3 cut(s) | 645, 1659, 1830 |
| BstF5I | GGATG | 7 cut(s) | 225, 610, 1366, 1731, 1782, 1801, 1870 |
| BstHHI | GCGC | 1 cut(s) | 657 |
| BstKTI | GATC | 6 cut(s) | 26, 175, 1028, 1456, 1665, 1711 |
| BstMAI | GTCTC | 4 cut(s) | 47, 119, 569, 1841 |
| BstMBI | GATC | 6 cut(s) | 23, 172, 1025, 1453, 1662, 1708 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 401, 404, 800, 989, 1502 |
| BstNI | CCWGG | 3 cut(s) | 602, 1331, 1862 |
| BstSCI | CCNGG | 3 cut(s) | 600, 1329, 1860 |
| BstSFI | CTRYAG | 4 cut(s) | 399, 519, 1293, 1299 |
| BstSLI | GKGCMC | 1 cut(s) | 1601 |
| BstV2I | GAAGAC | 3 cut(s) | 12, 512, 1516 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 205 |
| BsuI | GTATCC | 1 cut(s) | 355 |
| BsuRI | GGCC | 5 cut(s) | 395, 992, 1391, 1488, 1599 |
| BtsCI | GGATG | 7 cut(s) | 225, 610, 1366, 1731, 1782, 1801, 1870 |
| BtsI | GCAGTG | 1 cut(s) | 980 |
| BtsIMutI | CAGTG | 3 cut(s) | 458, 980, 1740 |
| Cac8I | GCNNGC | 7 cut(s) | 758, 964, 1266, 1449, 1684, 1793, 1922 |
| CaiI | CAGNNNCTG | 1 cut(s) | 652 |
| CfoI | GCGC | 1 cut(s) | 657 |
| Cfr13I | GGNCC | 3 cut(s) | 1487, 1597, 1598 |
| CseI | GACGC | 3 cut(s) | 809, 1355, 1823 |
| Csp6I | GTAC | 7 cut(s) | 379, 468, 683, 950, 1105, 1731, 1761 |
| CviAII | CATG | 5 cut(s) | 941, 1582, 1606, 1823, 1916 |
| CviQI | GTAC | 7 cut(s) | 379, 468, 683, 950, 1105, 1731, 1761 |
| DdeI | CTNAG | 3 cut(s) | 645, 1659, 1830 |
| DpnI | GATC | 6 cut(s) | 25, 174, 1027, 1455, 1664, 1710 |
| DpnII | GATC | 6 cut(s) | 23, 172, 1025, 1453, 1662, 1708 |
| DraI | TTTAAA | 1 cut(s) | 564 |
| EaeI | YGGCCR | 1 cut(s) | 393 |
| Eam1104I | CTCTTC | 3 cut(s) | 476, 852, 1766 |
| EarI | CTCTTC | 3 cut(s) | 476, 852, 1766 |
| EciI | GGCGGA | 1 cut(s) | 257 |
| Eco130I | CCWWGG | 2 cut(s) | 60, 336 |
| Eco147I | AGGCCT | 1 cut(s) | 1391 |
| Eco24I | GRGCYC | 2 cut(s) | 826, 1601 |
| Eco31I | GGTCTC | 1 cut(s) | 47 |
| Eco32I | GATATC | 1 cut(s) | 1799 |
| Eco57I | CTGAAG | 5 cut(s) | 330, 524, 1153, 1341, 1613 |
| EcoRII | CCWGG | 3 cut(s) | 600, 1329, 1860 |
| EcoRV | GATATC | 1 cut(s) | 1799 |
| EcoT14I | CCWWGG | 2 cut(s) | 60, 336 |
| EcoT22I | ATGCAT | 1 cut(s) | 1893 |
| EcoT38I | GRGCYC | 2 cut(s) | 826, 1601 |
| ErhI | CCWWGG | 2 cut(s) | 60, 336 |
| Esp3I | CGTCTC | 1 cut(s) | 1841 |
| FaeI | CATG | 5 cut(s) | 944, 1585, 1609, 1826, 1919 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 82, 114, 921, 953, 937, 969, 1626, 1658 |
| FatI | CATG | 5 cut(s) | 940, 1581, 1605, 1822, 1915 |
| FauI | CCCGC | 3 cut(s) | 453, 971, 1913 |
| FauNDI | CATATG | 2 cut(s) | 498, 1841 |
| FbaI | TGATCA | 1 cut(s) | 1453 |
| FblI | GTMKAC | 1 cut(s) | 1344 |
| FokI | GGATG | 7 cut(s) | 232, 617, 1373, 1738, 1788, 1789, 1877 |
| FriOI | GRGCYC | 2 cut(s) | 826, 1601 |
| FspI | TGCGCA | 1 cut(s) | 656 |
| GlaI | GCGC | 1 cut(s) | 656 |
| GsaI | CCCAGC | 1 cut(s) | 973 |
| HaeIII | GGCC | 5 cut(s) | 395, 992, 1391, 1488, 1599 |
| HapII | CCGG | 1 cut(s) | 993 |
| HgaI | GACGC | 3 cut(s) | 809, 1355, 1823 |
| HhaI | GCGC | 1 cut(s) | 657 |
| Hin1I | GRCGYC | 1 cut(s) | 1347 |
| Hin1II | CATG | 5 cut(s) | 944, 1585, 1609, 1826, 1919 |
| Hin6I | GCGC | 1 cut(s) | 655 |
| HinP1I | GCGC | 1 cut(s) | 655 |
| HincII | GTYRAC | 1 cut(s) | 1417 |
| HindII | GTYRAC | 1 cut(s) | 1417 |
| HindIII | AAGCTT | 2 cut(s) | 1058, 1199 |
| HinfI | GANTC | 3 cut(s) | 639, 1748, 1871 |
| HpaI | GTTAAC | 1 cut(s) | 1417 |
| HpaII | CCGG | 1 cut(s) | 993 |
| HphI | GGTGA | 2 cut(s) | 193, 931 |
| Hpy166II | GTNNAC | 4 cut(s) | 1345, 1417, 1738, 1786 |
| Hpy188I | TCNGA | 6 cut(s) | 144, 235, 1570, 1662, 1713, 1880 |
| Hpy188III | TCNNGA | 7 cut(s) | 49, 265, 593, 797, 1403, 1745, 1810 |
| Hpy8I | GTNNAC | 4 cut(s) | 1345, 1417, 1738, 1786 |
| Hpy99I | CGWCG | 1 cut(s) | 14 |
| HpyAV | CCTTC | 3 cut(s) | 262, 354, 1409 |
| HpyCH4III | ACNGT | 4 cut(s) | 262, 462, 1109, 1735 |
| HpyCH4IV | ACGT | 1 cut(s) | 1278 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 401, 404, 800, 989, 1502 |
| HpyF3I | CTNAG | 3 cut(s) | 645, 1659, 1830 |
| HpySE526I | ACGT | 1 cut(s) | 1278 |
| Hsp92I | GRCGYC | 1 cut(s) | 1347 |
| Hsp92II | CATG | 5 cut(s) | 944, 1585, 1609, 1826, 1919 |
| HspAI | GCGC | 1 cut(s) | 655 |
| KpnI | GGTACC | 1 cut(s) | 953 |
| Ksp22I | TGATCA | 1 cut(s) | 1453 |
| KspAI | GTTAAC | 1 cut(s) | 1417 |
| Kzo9I | GATC | 6 cut(s) | 23, 172, 1025, 1453, 1662, 1708 |
| LmnI | GCTCC | 1 cut(s) | 1261 |
| LweI | GCATC | 2 cut(s) | 823, 1583 |
| MaeII | ACGT | 1 cut(s) | 1278 |
| MaeIII | GTNAC | 1 cut(s) | 689 |
| MalI | GATC | 6 cut(s) | 25, 174, 1027, 1455, 1664, 1710 |
| MboI | GATC | 6 cut(s) | 23, 172, 1025, 1453, 1662, 1708 |
| MfeI | CAATTG | 1 cut(s) | 1497 |
| MhlI | GDGCHC | 3 cut(s) | 826, 1601, 1622 |
| MlyI | GAGTC | 1 cut(s) | 633 |
| MmeI | TCCRAC | 3 cut(s) | 49, 205, 1776 |
| Mph1103I | ATGCAT | 1 cut(s) | 1893 |
| MseI | TTAA | 6 cut(s) | 89, 321, 414, 563, 1146, 1416 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1220 |
| MspA1I | CMGCKG | 3 cut(s) | 398, 760, 1298 |
| MspI | CCGG | 1 cut(s) | 993 |
| MspR9I | CCNGG | 3 cut(s) | 602, 1331, 1862 |
| MunI | CAATTG | 1 cut(s) | 1497 |
| Mva1269I | GAATGC | 3 cut(s) | 80, 1173, 1310 |
| MvaI | CCWGG | 3 cut(s) | 602, 1331, 1862 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 401, 404, 800, 989, 1502 |
| NdeI | CATATG | 2 cut(s) | 498, 1841 |
| NdeII | GATC | 6 cut(s) | 23, 172, 1025, 1453, 1662, 1708 |
| NlaIII | CATG | 5 cut(s) | 944, 1585, 1609, 1826, 1919 |
| NlaIV | GGNNCC | 4 cut(s) | 210, 342, 951, 1599 |
| NmuCI | GTSAC | 1 cut(s) | 689 |
| NsbI | TGCGCA | 1 cut(s) | 656 |
| NsiI | ATGCAT | 1 cut(s) | 1893 |
| PceI | AGGCCT | 1 cut(s) | 1391 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 45 |
| PctI | GAATGC | 3 cut(s) | 80, 1173, 1310 |
| PfeI | GAWTC | 2 cut(s) | 1748, 1871 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 763 |
| PleI | GAGTC | 1 cut(s) | 633 |
| PpsI | GAGTC | 1 cut(s) | 633 |
| Psp1406I | AACGTT | 1 cut(s) | 1278 |
| Psp6I | CCWGG | 3 cut(s) | 600, 1329, 1860 |
| PspFI | CCCAGC | 1 cut(s) | 969 |
| PspGI | CCWGG | 3 cut(s) | 600, 1329, 1860 |
| PspN4I | GGNNCC | 4 cut(s) | 210, 342, 951, 1599 |
| PspOMI | GGGCCC | 1 cut(s) | 1597 |
| PspPI | GGNCC | 3 cut(s) | 1487, 1597, 1598 |
| PstI | CTGCAG | 3 cut(s) | 403, 1297, 1303 |
| PstNI | CAGNNNCTG | 1 cut(s) | 652 |
| PvuII | CAGCTG | 2 cut(s) | 760, 1298 |
| RsaI | GTAC | 7 cut(s) | 380, 469, 684, 951, 1106, 1732, 1762 |
| RsaNI | GTAC | 7 cut(s) | 379, 468, 683, 950, 1105, 1731, 1761 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1220 |
| SaqAI | TTAA | 6 cut(s) | 89, 321, 414, 563, 1146, 1416 |
| Sau3AI | GATC | 6 cut(s) | 23, 172, 1025, 1453, 1662, 1708 |
| Sau96I | GGNCC | 3 cut(s) | 1487, 1597, 1598 |
| ScaI | AGTACT | 2 cut(s) | 380, 684 |
| SchI | GAGTC | 1 cut(s) | 633 |
| ScrFI | CCNGG | 3 cut(s) | 602, 1331, 1862 |
| SduI | GDGCHC | 3 cut(s) | 826, 1601, 1622 |
| SfaNI | GCATC | 2 cut(s) | 823, 1583 |
| SfcI | CTRYAG | 4 cut(s) | 399, 519, 1293, 1299 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1220 |
| SmlI | CTYRAG | 2 cut(s) | 817, 1523 |
| SmoI | CTYRAG | 2 cut(s) | 817, 1523 |
| SpeI | ACTAGT | 2 cut(s) | 128, 1040 |
| SseBI | AGGCCT | 1 cut(s) | 1391 |
| SsiI | CCGC | 5 cut(s) | 242, 396, 446, 964, 1920 |
| SspI | AATATT | 2 cut(s) | 859, 1853 |
| StuI | AGGCCT | 1 cut(s) | 1391 |
| StyD4I | CCNGG | 3 cut(s) | 600, 1329, 1860 |
| StyI | CCWWGG | 2 cut(s) | 60, 336 |
| TaaI | ACNGT | 4 cut(s) | 262, 462, 1109, 1735 |
| TaiI | ACGT | 1 cut(s) | 1281 |
| TaqI | TCGA | 3 cut(s) | 26, 48, 84 |
| TaqII | GACCGA | 1 cut(s) | 29 |
| TatI | WGTACW | 2 cut(s) | 378, 682 |
| TauI | GCSGC | 1 cut(s) | 398 |
| TfiI | GAWTC | 2 cut(s) | 1748, 1871 |
| Tru1I | TTAA | 6 cut(s) | 89, 321, 414, 563, 1146, 1416 |
| Tru9I | TTAA | 6 cut(s) | 89, 321, 414, 563, 1146, 1416 |
| TscAI | CASTG | 3 cut(s) | 465, 980, 1740 |
| TseFI | GTSAC | 1 cut(s) | 689 |
| Tsp45I | GTSAC | 1 cut(s) | 689 |
| TspDTI | ATGAA | 6 cut(s) | 126, 440, 929, 942, 1204, 1904 |
| TspGWI | ACGGA | 4 cut(s) | 27, 1036, 1330, 1778 |
| TspRI | CASTG | 3 cut(s) | 465, 980, 1740 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 763 |
| XapI | RAATTY | 4 cut(s) | 325, 427, 659, 1472 |
| XbaI | TCTAGA | 3 cut(s) | 592, 796, 1402 |
| XmiI | GTMKAC | 1 cut(s) | 1344 |
| ZrmI | AGTACT | 2 cut(s) | 380, 684 |
| Zsp2I | ATGCAT | 1 cut(s) | 1893 |