Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0010414

Physical Location & Seq

Genomic Coordinates Forward (+)

19004267 .. 19014929

Gene Structure 10663 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG208200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGTCATTCTTGGCTTTCCAGGGTGCTGTGTTGATTAAAAATCTAGCAGCCAAGGAACCTTCAGCACTAGGATTGGATACTTATTACAAGCAGTACTATCTCTGCTTGGCCGCTGCAGCAGCTACAATTAAGTGGATAGAAGCAGAGAAAGGGGTCATTGTTACAAACCACTCATTGTCGGTCACTTTTAATGGATCATTTGCCCATTTGAATATCGATGCTACTAGTGTTCAAAATTTGGAAATCATTGACCCGCTTCATTCTACACTGTGGGGTACAAGCAATAAGAAGAGAAGTTTGTTGCATATGCTGAAGACGACAAAAACTATAGGAGGGTCTAGGCTTCTTCGTGCCAATCTATTGCAGCCTTTAAAAGATATTGAGACTATAAATGCTCGTCTAGATTGCCTGGATGAGCTAATGAGCAACGAACAGCTATTCTTTGGACTCTCTCAGGTTCTGCGCAAATTCCCAAAAGAGAGTGATAGAGTACTTTGTCACTTCTGCTTCAAGCCAAAGAAAATTACAAATAAAGTTATGCGTGTTGATAATGCTAGAAAAAGCCAGCTGTTGGTATCAAGCATTATTCTCCTCAAAACTGCTCTAGACGCTTTGCCTTTACTCTCAAGGGCTCTCAAAGATGCAAAAAGTTCTCTTCTTGCTAATGTTTACAAGTCTGTGTGTGAAAATGAGAAATATGCTGCTATTAGGAAAAGGATTGGAGAGGTGATTGATGAAGATGTGCTTCATGCAAGGGTACCTTTTGTAGCCCGCACCCAGCAGTGTTTTGCTGTAAAGGCCGGAATTGATGGACTTTTGGATATTGCACGGAGATCATTTTGTGATACTAGTGAAGCTATACATAATCTTGCTAACAAGTACCGCGAAGATTTCAAGTTCCCCAATTTGAAACTCACATTTAACAATAGGCAAGGTTTCTACTTCAGCATTCCACATAAGAGCATTGAGGGGAAGCTTCCTAGCCAGTTCATTCAGGTGTTGAAACACGGGAACAATATACATTGCTCAACTTTGGAGCTTGCTTCTCTAAACGTTAGAAATAAGTCTGCAGCTGCAGAATGCTTCCTACGGACTGAAGTTTGCCTGGAAGAATTAGTAGACGCCATACGAGAGGATGTTTCTGCACTCACATTACTTGCAGAGGCCTTGTGCCTTCTAGATATGATTGTTAACTCATTTGCACATACCATTTCCAATAAGCCTGCTGATCATTATACTAGACCAGAATTTACAGATGATGGCCCAATGGCAATTGAAGCTGGAAGACACCCTATCCTTGAGAGCATACACAATGATTTTGTTCCCAACAACATCTTTTTATCAGAGGCATCAAACATGGTGCTGATTGTGGGCCCAAACATGAGTGGAAAGAGCACTTATCTTCAGCAAGTATGTCTTATAGTTATTCTTGCTCAGATTGGTTGTTATGTTCCTGCTCGCTTCTCAACTTTGAGGGTTGTTGATCGGATATTTACAAGGATGGGTACAGTGGACAATCTTGAATCCAACTCTAGTACGTTCATGACAGAAATGAAAGAAACAGCTTTCATCATGCAAAATGTTTCCCAAAGGAGTCTGGTTGTCATGGATGAACTTGGGAGGGCTACATCTTCCTCTGATGGATTTGCAATTGCATGGAGCTGCTGCGAACATTTGTTATCACTGAAAGCGTATACTATATTTGCTACTCATATGGAGAACCTCTCCGAATTAGTAACTGTCTATCCAAATGTGAAAATACTTCACTTCGATGTTGACATTAAAAATAACCGTCTAGATTTCAAGTTTCAACTCAAGGAAGGACCAAGACATGTTCCACATTATGGGCTTCTATTAGCAGAAGTGGCAGGATTACCAAGCTCGGTGACTGAGACAGCCAGAAACATCACATCCAGGATCACAGAAAAGGAAGTGAAGAGGATGGAAGTAAACTGCCTGCGATATCATCCAATCCAGATGGCTTACCATGTTGCTCAGCGTCTCATATGTTTGAAATATTCCAGCCAGGATGAGGATTCAATCAGAGAAGCACTGCATAACCTGAAAGAGAGCTACATTCATGGCACTGCAAATCAATATATGCCCTTGGTAAATAAAATACAGAACTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000795 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006298 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0008094 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022414 GO:0022607 GO:0030983 GO:0031974 GO:0031981 GO:0033554 GO:0034641 GO:0035825 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0046483 GO:0048285 GO:0050896 GO:0051026 GO:0051276 GO:0051321 GO:0051716 GO:0061982 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098813 GO:0099086 GO:0140013 GO:1901360 GO:1901363 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MutS_III MutS_IV MutS_V

Protein Analysis

710

Amino Acids

79.82

Weight (kDa)

8.4

Isoelectric Point (pI)

42.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MutS_III	PF05192	76 - 397	1.7e-25	MutS domain III
MutS_IV	PF05190	268 - 357	6.3e-12	MutS family domain IV
MutS_V	PF00488	455 - 640	7e-68	MutS domain V

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010414)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17380 AT4G17380
fragaria_vesca	FvH4_5g19230 FvH4_5g19230
malus_domestica	MD04G1062200.v1.1
prunus_persica	Prupe.5G066100_v2.0.a1 Prupe.5G066100_v2.0.a1
pyrus_communis	pycom04g05580
rosa_chinensis	RchiOBHm_Chr7g0203731
rosa_laevigata	RLG00000003509
rosa_multiflora	Rmu_sc0001714.1_g000006 Rmu_sc0005354.1_g000001
rosa_roxburghii	Rroxscaffold_3G00253590
rosa_rugosa	Rorug07G0078500 Rorug07G0078600 Rorug07G0078700
rosa_samantha	Rh7AG208200 Rh7BG207200 Rh7CG220400 Rh7DG215100
rosa_wichuraiana	Rw7G018130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	464
Acc65I	GGTACC	1 cut(s)	757
AccB1I	GGYRCC	1 cut(s)	757
AccB7I	CCANNNNNTGG	2 cut(s)	571, 1844
AccI	GTMKAC	2 cut(s)	1119, 1694
AccII	CGCG	1 cut(s)	885
AciI	CCGC	4 cut(s)	111, 254, 772, 883
AclI	AACGTT	1 cut(s)	1053
AclWI	GGATC	2 cut(s)	202, 1925
AcoI	YGGCCR	1 cut(s)	108
AcsI	RAATTY	3 cut(s)	235, 467, 1247
AcuI	CTGAAG	5 cut(s)	45, 332, 928, 1116, 1388
AcyI	GRCGYC	1 cut(s)	1122
AfaI	GTAC	7 cut(s)	95, 277, 492, 759, 881, 1507, 1537
AfiI	CCNNNNNNNGG	3 cut(s)	571, 1844, 2032
AflIII	ACRYGT	1 cut(s)	1831
AhlI	ACTAGT	2 cut(s)	224, 848
AjnI	CCWGG	5 cut(s)	18, 408, 1104, 1913, 2025
Alw21I	GWGCWC	1 cut(s)	1397
Alw26I	GTCTC	3 cut(s)	377, 1886, 2006
AlwI	GGATC	2 cut(s)	202, 1925
AlwNI	CAGNNNCTG	1 cut(s)	460
AoxI	GGCC	5 cut(s)	108, 798, 1164, 1261, 1372
ApaI	GGGCCC	1 cut(s)	1376
ApoI	RAATTY	3 cut(s)	235, 467, 1247
Asp718I	GGTACC	1 cut(s)	757
AspLEI	GCGC	1 cut(s)	465
AspS9I	GGNCC	4 cut(s)	1262, 1372, 1373, 1823
AsuHPI	GGTGA	2 cut(s)	739, 1897
AvaII	GGWCC	1 cut(s)	1823
BaeGI	GKGCMC	1 cut(s)	1376
BanI	GGYRCC	1 cut(s)	757
BanII	GRGCYC	2 cut(s)	634, 1376
BbsI	GAAGAC	2 cut(s)	320, 1291
Bbv12I	GWGCWC	1 cut(s)	1397
BccI	CCATC	6 cut(s)	803, 1253, 1495, 1634, 1936, 1972
BciT130I	CCWGG	5 cut(s)	20, 410, 1106, 1915, 2027
BciVI	GTATCC	1 cut(s)	70
BclI	TGATCA	1 cut(s)	1228
BcoDI	GTCTC	3 cut(s)	377, 1886, 2006
BcuI	ACTAGT	2 cut(s)	224, 848
BfmI	CTRYAG	4 cut(s)	114, 327, 1068, 1074
BfuI	GTATCC	1 cut(s)	70
BlpI	GCTNAGC	1 cut(s)	1995
BmcAI	AGTACT	2 cut(s)	95, 492
Bme1390I	CCNGG	5 cut(s)	20, 410, 1106, 1915, 2027
Bme18I	GGWCC	1 cut(s)	1823
BmgT120I	GGNCC	4 cut(s)	1262, 1372, 1373, 1823
BmiI	GGNNCC	3 cut(s)	57, 759, 1374
BmrFI	CCNGG	5 cut(s)	20, 410, 1106, 1915, 2027
BmsI	GCATC	3 cut(s)	208, 631, 1358
BpiI	GAAGAC	2 cut(s)	320, 1291
BplI	GAGNNNNNCTC	2 cut(s)	1709, 1741
Bpu1102I	GCTNAGC	1 cut(s)	1995
BpuEI	CTTGAG	3 cut(s)	610, 1319, 1799
Bsa29I	ATCGAT	1 cut(s)	216
BsaHI	GRCGYC	1 cut(s)	1122
BsaJI	CCNNGG	3 cut(s)	19, 51, 2106
Bsc4I	CCNNNNNNNGG	3 cut(s)	571, 1844, 2032
Bse1I	ACTGG	1 cut(s)	985
Bse3DI	GCAATG	1 cut(s)	1021
BseBI	CCWGG	5 cut(s)	20, 410, 1106, 1915, 2027
BseCI	ATCGAT	1 cut(s)	216
BseDI	CCNNGG	3 cut(s)	19, 51, 2106
BseGI	GGATG	8 cut(s)	418, 1141, 1506, 1615, 1910, 1947, 1966, 2035
BseLI	CCNNNNNNNGG	3 cut(s)	571, 1844, 2032
BseMI	GCAATG	1 cut(s)	1021
BseMII	CTCAG	4 cut(s)	467, 1448, 1881, 2009
BseNI	ACTGG	1 cut(s)	985
BseRI	GAGGAG	1 cut(s)	581
BseSI	GKGCMC	1 cut(s)	1376
BseYI	CCCAGC	1 cut(s)	777
BsgI	GTGCAG	1 cut(s)	1128
Bsh1236I	CGCG	1 cut(s)	885
BshFI	GGCC	5 cut(s)	110, 800, 1166, 1263, 1374
BshNI	GGYRCC	1 cut(s)	757
BshVI	ATCGAT	1 cut(s)	216
BsiHKAI	GWGCWC	1 cut(s)	1397
BsiSI	CCGG	1 cut(s)	801
BslI	CCNNNNNNNGG	3 cut(s)	571, 1844, 2032
BsmAI	GTCTC	3 cut(s)	377, 1886, 2006
BsmBI	CGTCTC	1 cut(s)	2006
BsmI	GAATGC	2 cut(s)	948, 1085
BsnI	GGCC	5 cut(s)	110, 800, 1166, 1263, 1374
Bsp120I	GGGCCC	1 cut(s)	1372
Bsp1286I	GDGCHC	3 cut(s)	634, 1376, 1397
Bsp143I	GATC	5 cut(s)	194, 833, 1228, 1483, 1917
Bsp1720I	GCTNAGC	1 cut(s)	1995
BspACI	CCGC	4 cut(s)	111, 254, 772, 883
BspANI	GGCC	5 cut(s)	110, 800, 1166, 1263, 1374
BspCNI	CTCAG	4 cut(s)	466, 1447, 1882, 2008
BspDI	ATCGAT	1 cut(s)	216
BspFNI	CGCG	1 cut(s)	885
BspHI	TCATGA	1 cut(s)	1542
BspLI	GGNNCC	3 cut(s)	57, 759, 1374
BspMAI	CTGCAG	3 cut(s)	118, 1072, 1078
BspPI	GGATC	2 cut(s)	202, 1925
BspT107I	GGYRCC	1 cut(s)	757
BsrDI	GCAATG	1 cut(s)	1021
BsrI	ACTGG	1 cut(s)	985
BssECI	CCNNGG	3 cut(s)	19, 51, 2106
BssMI	GATC	5 cut(s)	194, 833, 1228, 1483, 1917
BssNAI	GTATAC	1 cut(s)	1695
BssNI	GRCGYC	1 cut(s)	1122
BssT1I	CCWWGG	2 cut(s)	51, 2106
Bst1107I	GTATAC	1 cut(s)	1695
Bst2UI	CCWGG	5 cut(s)	20, 410, 1106, 1915, 2027
Bst4CI	ACNGT	4 cut(s)	270, 1510, 1741, 1793
Bst6I	CTCTTC	3 cut(s)	284, 660, 1931
BstACI	GRCGYC	1 cut(s)	1122
BstC8I	GCNNGC	6 cut(s)	566, 772, 1041, 1224, 1459, 1958
BstDEI	CTNAG	4 cut(s)	453, 1434, 1890, 1995
BstF5I	GGATG	8 cut(s)	418, 1141, 1506, 1615, 1910, 1947, 1966, 2035
BstFNI	CGCG	1 cut(s)	885
BstHHI	GCGC	1 cut(s)	465
BstKTI	GATC	5 cut(s)	197, 836, 1231, 1486, 1920
BstMAI	GTCTC	3 cut(s)	377, 1886, 2006
BstMBI	GATC	5 cut(s)	194, 833, 1228, 1483, 1917
BstMWI	GCNNNNNNNGC	6 cut(s)	116, 119, 608, 797, 1277, 1865
BstNI	CCWGG	5 cut(s)	20, 410, 1106, 1915, 2027
BstNSI	RCATGY	1 cut(s)	1835
BstSCI	CCNGG	5 cut(s)	18, 408, 1104, 1913, 2025
BstSFI	CTRYAG	4 cut(s)	114, 327, 1068, 1074
BstSLI	GKGCMC	1 cut(s)	1376
BstUI	CGCG	1 cut(s)	885
BstV2I	GAAGAC	2 cut(s)	320, 1291
BstZ17I	GTATAC	1 cut(s)	1695
Bsu15I	ATCGAT	1 cut(s)	216
BsuI	GTATCC	1 cut(s)	70
BsuRI	GGCC	5 cut(s)	110, 800, 1166, 1263, 1374
BsuTUI	ATCGAT	1 cut(s)	216
BtsCI	GGATG	8 cut(s)	418, 1141, 1506, 1615, 1910, 1947, 1966, 2035
BtsI	GCAGTG	3 cut(s)	788, 2051, 2085
BtsIMutI	CAGTG	6 cut(s)	266, 788, 1515, 1682, 2051, 2085
Cac8I	GCNNGC	6 cut(s)	566, 772, 1041, 1224, 1459, 1958
CaiI	CAGNNNCTG	1 cut(s)	460
CciI	TCATGA	1 cut(s)	1542
CfoI	GCGC	1 cut(s)	465
Cfr13I	GGNCC	4 cut(s)	1262, 1372, 1373, 1823
ClaI	ATCGAT	1 cut(s)	216
CseI	GACGC	3 cut(s)	617, 1130, 1988
Csp6I	GTAC	7 cut(s)	94, 276, 491, 758, 880, 1506, 1536
CviQI	GTAC	7 cut(s)	94, 276, 491, 758, 880, 1506, 1536
DdeI	CTNAG	4 cut(s)	453, 1434, 1890, 1995
DpnI	GATC	5 cut(s)	196, 835, 1230, 1485, 1919
DpnII	GATC	5 cut(s)	194, 833, 1228, 1483, 1917
DraI	TTTAAA	1 cut(s)	372
EaeI	YGGCCR	1 cut(s)	108
Eam1104I	CTCTTC	3 cut(s)	284, 660, 1931
EarI	CTCTTC	3 cut(s)	284, 660, 1931
Eco130I	CCWWGG	2 cut(s)	51, 2106
Eco147I	AGGCCT	1 cut(s)	1166
Eco24I	GRGCYC	2 cut(s)	634, 1376
Eco32I	GATATC	1 cut(s)	1964
Eco47I	GGWCC	1 cut(s)	1823
Eco57I	CTGAAG	5 cut(s)	45, 332, 928, 1116, 1388
EcoRII	CCWGG	5 cut(s)	18, 408, 1104, 1913, 2025
EcoRV	GATATC	1 cut(s)	1964
EcoT14I	CCWWGG	2 cut(s)	51, 2106
EcoT38I	GRGCYC	2 cut(s)	634, 1376
ErhI	CCWWGG	2 cut(s)	51, 2106
Esp3I	CGTCTC	1 cut(s)	2006
FalI	AAGNNNNNCTT	6 cut(s)	729, 761, 745, 777, 1401, 1433
FauI	CCCGC	2 cut(s)	261, 779
FauNDI	CATATG	3 cut(s)	306, 1713, 2006
FbaI	TGATCA	1 cut(s)	1228
FblI	GTMKAC	2 cut(s)	1119, 1694
FokI	GGATG	8 cut(s)	425, 1148, 1513, 1622, 1897, 1953, 1954, 2042
FriOI	GRGCYC	2 cut(s)	634, 1376
FspI	TGCGCA	1 cut(s)	464
GlaI	GCGC	1 cut(s)	464
GsaI	CCCAGC	1 cut(s)	781
HaeIII	GGCC	5 cut(s)	110, 800, 1166, 1263, 1374
HapII	CCGG	1 cut(s)	801
HgaI	GACGC	3 cut(s)	617, 1130, 1988
HhaI	GCGC	1 cut(s)	465
Hin1I	GRCGYC	1 cut(s)	1122
Hin6I	GCGC	1 cut(s)	463
HinP1I	GCGC	1 cut(s)	463
HincII	GTYRAC	2 cut(s)	1192, 1777
HindII	GTYRAC	2 cut(s)	1192, 1777
HindIII	AAGCTT	1 cut(s)	974
HinfI	GANTC	4 cut(s)	447, 1523, 1594, 2036
HpaI	GTTAAC	1 cut(s)	1192
HpaII	CCGG	1 cut(s)	801
HphI	GGTGA	2 cut(s)	739, 1897
Hpy166II	GTNNAC	7 cut(s)	670, 1120, 1192, 1513, 1695, 1777, 1951
Hpy188I	TCNGA	6 cut(s)	1345, 1437, 1488, 1639, 1729, 2045
Hpy188III	TCNNGA	7 cut(s)	401, 605, 1178, 1520, 1543, 1796, 1975
Hpy8I	GTNNAC	7 cut(s)	670, 1120, 1192, 1513, 1695, 1777, 1951
HpyAV	CCTTC	3 cut(s)	69, 1184, 1814
HpyCH4III	ACNGT	4 cut(s)	270, 1510, 1741, 1793
HpyCH4IV	ACGT	2 cut(s)	1053, 1538
HpyF10VI	GCNNNNNNNGC	6 cut(s)	116, 119, 608, 797, 1277, 1865
HpyF3I	CTNAG	4 cut(s)	453, 1434, 1890, 1995
HpySE526I	ACGT	2 cut(s)	1053, 1538
Hsp92I	GRCGYC	1 cut(s)	1122
HspAI	GCGC	1 cut(s)	463
KpnI	GGTACC	1 cut(s)	761
Ksp22I	TGATCA	1 cut(s)	1228
KspAI	GTTAAC	1 cut(s)	1192
Kzo9I	GATC	5 cut(s)	194, 833, 1228, 1483, 1917
LmnI	GCTCC	2 cut(s)	1036, 1659
LweI	GCATC	3 cut(s)	208, 631, 1358
MaeII	ACGT	2 cut(s)	1053, 1538
MaeIII	GTNAC	5 cut(s)	160, 181, 497, 1735, 1885
MalI	GATC	5 cut(s)	196, 835, 1230, 1485, 1919
MboI	GATC	5 cut(s)	194, 833, 1228, 1483, 1917
MfeI	CAATTG	2 cut(s)	1272, 1650
MhlI	GDGCHC	3 cut(s)	634, 1376, 1397
MlyI	GAGTC	2 cut(s)	441, 1603
MmeI	TCCRAC	1 cut(s)	1551
MseI	TTAA	7 cut(s)	36, 129, 189, 371, 921, 1191, 1782
MslI	CAYNNNNRTG	2 cut(s)	995, 1770
MspA1I	CMGCKG	3 cut(s)	113, 568, 1073
MspI	CCGG	1 cut(s)	801
MspR9I	CCNGG	5 cut(s)	20, 410, 1106, 1915, 2027
MunI	CAATTG	2 cut(s)	1272, 1650
Mva1269I	GAATGC	2 cut(s)	948, 1085
MvaI	CCWGG	5 cut(s)	20, 410, 1106, 1915, 2027
MvnI	CGCG	1 cut(s)	885
MwoI	GCNNNNNNNGC	6 cut(s)	116, 119, 608, 797, 1277, 1865
NdeI	CATATG	3 cut(s)	306, 1713, 2006
NdeII	GATC	5 cut(s)	194, 833, 1228, 1483, 1917
NlaIV	GGNNCC	3 cut(s)	57, 759, 1374
NmuCI	GTSAC	3 cut(s)	181, 497, 1885
NsbI	TGCGCA	1 cut(s)	464
NspI	RCATGY	1 cut(s)	1835
PagI	TCATGA	1 cut(s)	1542
PceI	AGGCCT	1 cut(s)	1166
PciI	ACATGT	1 cut(s)	1831
PctI	GAATGC	2 cut(s)	948, 1085
PfeI	GAWTC	2 cut(s)	1523, 2036
PflMI	CCANNNNNTGG	2 cut(s)	571, 1844
PfoI	TCCNGGA	1 cut(s)	1913
PleI	GAGTC	2 cut(s)	441, 1602
PpsI	GAGTC	2 cut(s)	441, 1602
PscI	ACATGT	1 cut(s)	1831
Psp1406I	AACGTT	1 cut(s)	1053
Psp6I	CCWGG	5 cut(s)	18, 408, 1104, 1913, 2025
PspFI	CCCAGC	1 cut(s)	777
PspGI	CCWGG	5 cut(s)	18, 408, 1104, 1913, 2025
PspN4I	GGNNCC	3 cut(s)	57, 759, 1374
PspOMI	GGGCCC	1 cut(s)	1372
PspPI	GGNCC	4 cut(s)	1262, 1372, 1373, 1823
PstI	CTGCAG	3 cut(s)	118, 1072, 1078
PstNI	CAGNNNCTG	1 cut(s)	460
PvuII	CAGCTG	2 cut(s)	568, 1073
RsaI	GTAC	7 cut(s)	95, 277, 492, 759, 881, 1507, 1537
RsaNI	GTAC	7 cut(s)	94, 276, 491, 758, 880, 1506, 1536
RseI	CAYNNNNRTG	2 cut(s)	995, 1770
SaqAI	TTAA	7 cut(s)	36, 129, 189, 371, 921, 1191, 1782
Sau3AI	GATC	5 cut(s)	194, 833, 1228, 1483, 1917
Sau96I	GGNCC	4 cut(s)	1262, 1372, 1373, 1823
ScaI	AGTACT	2 cut(s)	95, 492
SchI	GAGTC	2 cut(s)	441, 1603
ScrFI	CCNGG	5 cut(s)	20, 410, 1106, 1915, 2027
SduI	GDGCHC	3 cut(s)	634, 1376, 1397
SfaNI	GCATC	3 cut(s)	208, 631, 1358
SfcI	CTRYAG	4 cut(s)	114, 327, 1068, 1074
SinI	GGWCC	1 cut(s)	1823
SmiMI	CAYNNNNRTG	2 cut(s)	995, 1770
SmlI	CTYRAG	3 cut(s)	625, 1298, 1814
SmoI	CTYRAG	3 cut(s)	625, 1298, 1814
SpeI	ACTAGT	2 cut(s)	224, 848
SseBI	AGGCCT	1 cut(s)	1166
SsiI	CCGC	4 cut(s)	111, 254, 772, 883
SspI	AATATT	1 cut(s)	2018
StuI	AGGCCT	1 cut(s)	1166
StyD4I	CCNGG	5 cut(s)	18, 408, 1104, 1913, 2025
StyI	CCWWGG	2 cut(s)	51, 2106
TaaI	ACNGT	4 cut(s)	270, 1510, 1741, 1793
TaiI	ACGT	2 cut(s)	1056, 1541
TaqI	TCGA	2 cut(s)	216, 1770
TaqII	GACCGA	1 cut(s)	169
TatI	WGTACW	2 cut(s)	93, 490
TauI	GCSGC	1 cut(s)	113
TfiI	GAWTC	2 cut(s)	1523, 2036
Tru1I	TTAA	7 cut(s)	36, 129, 189, 371, 921, 1191, 1782
Tru9I	TTAA	7 cut(s)	36, 129, 189, 371, 921, 1191, 1782
TscAI	CASTG	6 cut(s)	273, 788, 1515, 1689, 2058, 2092
TseFI	GTSAC	3 cut(s)	181, 497, 1885
Tsp45I	GTSAC	3 cut(s)	181, 497, 1885
TspDTI	ATGAA	9 cut(s)	248, 737, 750, 979, 1531, 1558, 1568, 1626, 2069
TspGWI	ACGGA	2 cut(s)	844, 1105
TspRI	CASTG	6 cut(s)	273, 788, 1515, 1689, 2058, 2092
Van91I	CCANNNNNTGG	2 cut(s)	571, 1844
VpaK11BI	GGWCC	1 cut(s)	1823
XapI	RAATTY	3 cut(s)	235, 467, 1247
XbaI	TCTAGA	4 cut(s)	400, 604, 1177, 1795
XceI	RCATGY	1 cut(s)	1835
XmiI	GTMKAC	2 cut(s)	1119, 1694
ZrmI	AGTACT	2 cut(s)	95, 492

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.