Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0011050

Physical Location & Seq

Genomic Coordinates Reverse (-)

64347395 .. 64348774

Gene Structure 1380 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005013

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1380 bp

ATGGCGGACGTCACCTACCTTCAAATCCACGACGTTGAAGAAAACCCAGCCTTCGAATCCCTCCCCTACTGGTCCTCCAACGACTTCGACCTCTACATCTCCTCCGATCCCGATTTCCCGCCGGCCCAGTTCGTCACCGTCCACGAAGAAGACGACGAAGACTTTGACGGCGAAGACGACATCTTTTCCCAGTACCATTCCACAATCCACGACGAGCGGAACCGCGACGACGTCGTTTCGGAGCCCAATTCCATTTCCAACACCGACGACTTGTCGTCTGACCGCGAGAACCAGGTCAATTTCGTCATGGATCTGTTCCAGCAGCGCGTCGAGCAGTCTCAGGTAACGGCCCGTTCCGTTTTGGTCTCCGGCGGCTCTGATTTTGGGGTTGTGGAGGGGAATTGCGATATGGATGATGGGTTGGATCTCGATTTGAGCTTAGGGTTAGGGTTAGGTTTAGATTTTAGGAATTGTTTTGACGATCCTGATGAAGATGACTTCTTTGTGGGAAGGAGGGTTTCCGGGTCGGAATCCGGTGAGGCGACGTCTTCTGTAGGTAGGGTGGAGCCGTTTGAGAGCTGCGGGAGGCTCGTTGGGTTTGGATCCGAGTCTGATGAGGATGAGAATGGGGTGATTGGGCTTGATTTGCATTCGGAGGATGAGTACGGTGAGGACCATGTTCATGGTGATTACGATGACGAAACGGGGGTTCCTCTGTGCTGGGATTCGCTTCGATTGGAGGAGCAGAGGGAGAGTAATGAGGAGTTTGAGTGGGAAGAAGTTGATGGTAGGGTGGAAGAGGTTTTCGGAATGCTTGTTGATCCTGATAATGAAGAGGAATCGGGTTCTGTTTCGGTTTCGCTCTCGGCAATGGCTGCTCCTGAGGAGGAAGTGAGTGTGGAGAGAGTTGAAGCTCTGGGGAATTTGGAATGGGAAGTGTTGCTGAATTCCCGCAATTGGGAGCCGAATCAGGAGCTGGACCATGATGCTGAACATTTCCCTGGTGATCATGATGACTACATCTACACAGCGGAATATGATATGTTGTTTGGGCAGTTTTCCGAGAATGAGAATGCAGTGATGGGCAGGCCTCCAGCTGCTAATTCTGTTGTCGAGACTCTTCCTTCAGTGGTTGTGACTCAGGAGGATGTGGAGAAGGGCAATGCACTCTGTGCGGTATGCAAGGATGATATTACTCTCGGGGAACAAGGAAAGAAGCTGCCTTGTGCTCATAGGTACCATGGCGACTGCATTGTGCCCTGGCTGCGCATTAGGAATACTTGTCCAGTTTGTCGATATGAGTTGCCTACCGATGATGCTGCTTATGAGCGTAGGAGGAGCCAGAGGACAGCTCATGGACTGAACTTTGGGCAGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009987 GO:0010026 GO:0010154 GO:0016043 GO:0016049 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022412 GO:0022414 GO:0030154 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0036211 GO:0040007 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048316 GO:0048468 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0060560 GO:0061458 GO:0070647 GO:0071704 GO:0071840 GO:0090376 GO:0090378 GO:0090558 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

460

Amino Acids

51.54

Weight (kDa)

4.05

Isoelectric Point (pI)

43.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	390 - 432	1.9e-11	Ring finger domain
zf-C3HC4_2	PF13923	391 - 431	3.1e-07	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	391 - 418	3.2e-07	RING-like zinc finger
zf-C3HC4	PF00097	391 - 431	3.6e-06	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	408 - 432	7.1e-06	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08139 AT5G08139
fragaria_vesca	FvH4_5g13270
malus_domestica	MD06G1206700.v1.1
prunus_persica	Prupe.5G211100_v2.0.a1
pyrus_communis	pycom14g18010
rosa_chinensis	RchiOBHm_Chr7g0183901
rosa_laevigata	RLG00000005013 RLG00000033786
rosa_multiflora	Rmu_sc0001926.1_g000006 Rmu_sc0004712.1_g000033 Rmu_sc0007533.1_g000005 Rmu_sc0012562.1_g000017
rosa_roxburghii	Rroxscaffold_3G00270100
rosa_rugosa	Rorug06G0461300
rosa_samantha	Rh7AG062200 Rh7BG062400 Rh7CG063800 Rh7DG062200
rosa_wichuraiana	Rw7G005140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	3 cut(s)	12, 234, 548
Acc16I	TGCGCA	1 cut(s)	1268
Acc65I	GGTACC	1 cut(s)	1236
AccB1I	GGYRCC	1 cut(s)	1236
AccBSI	CCGCTC	1 cut(s)	217
AccII	CGCG	3 cut(s)	225, 285, 327
AclWI	GGATC	7 cut(s)	101, 318, 432, 476, 597, 610, 815
AcsI	RAATTY	2 cut(s)	922, 946
AcuI	CTGAAG	1 cut(s)	1110
AcyI	GRCGYC	3 cut(s)	9, 231, 545
AdeI	CACNNNGTG	1 cut(s)	1172
AfaI	GTAC	3 cut(s)	194, 665, 1238
AfiI	CCNNNNNNNGG	2 cut(s)	957, 958
AgsI	TTSAA	3 cut(s)	23, 38, 911
AhdI	GACNNNNNGTC	2 cut(s)	271, 274
AjnI	CCWGG	3 cut(s)	291, 1000, 1259
AluBI	AGCT	7 cut(s)	438, 579, 914, 976, 1097, 1219, 1352
AluI	AGCT	7 cut(s)	438, 579, 914, 976, 1097, 1219, 1352
Alw21I	GWGCWC	1 cut(s)	1231
Alw26I	GTCTC	3 cut(s)	342, 370, 1109
AlwI	GGATC	7 cut(s)	101, 318, 432, 476, 597, 610, 815
AlwNI	CAGNNNCTG	1 cut(s)	976
Ama87I	CYCGRG	1 cut(s)	1199
AoxI	GGCC	3 cut(s)	123, 348, 1088
ApeKI	GCWGC	7 cut(s)	322, 579, 875, 1097, 1219, 1264, 1319
ApoI	RAATTY	2 cut(s)	922, 946
ArsI	GACNNNNNNTTYG	2 cut(s)	146, 178
Asp718I	GGTACC	1 cut(s)	1236
AspLEI	GCGC	2 cut(s)	327, 1269
AspS9I	GGNCC	5 cut(s)	72, 124, 349, 673, 979
AsuC2I	CCSGG	1 cut(s)	523
AsuHPI	GGTGA	7 cut(s)	4, 127, 548, 643, 680, 698, 1016
AsuII	TTCGAA	1 cut(s)	54
AvaI	CYCGRG	1 cut(s)	1199
AvaII	GGWCC	3 cut(s)	72, 673, 979
AxyI	CCTNAGG	1 cut(s)	882
BaeGI	GKGCMC	1 cut(s)	1260
BamHI	GGATCC	1 cut(s)	602
BanI	GGYRCC	1 cut(s)	1236
BanII	GRGCYC	1 cut(s)	246
BbsI	GAAGAC	4 cut(s)	156, 165, 180, 540
Bbv12I	GWGCWC	1 cut(s)	1231
BbvI	GCAGC	7 cut(s)	334, 566, 862, 1084, 1206, 1251, 1306
BccI	CCATC	3 cut(s)	410, 779, 1075
BceAI	ACGGC	3 cut(s)	184, 363, 553
BcgI	CGANNNNNNTGC	2 cut(s)	1301, 1335
BciT130I	CCWGG	3 cut(s)	293, 1002, 1261
BclI	TGATCA	1 cut(s)	1006
BcnI	CCSGG	1 cut(s)	523
BcoDI	GTCTC	3 cut(s)	342, 370, 1109
BfmI	CTRYAG	1 cut(s)	552
BisI	GCNGC	8 cut(s)	323, 373, 580, 876, 1098, 1220, 1265, 1320
BlsI	GCNGC	8 cut(s)	324, 374, 581, 877, 1099, 1221, 1266, 1321
Bme1390I	CCNGG	4 cut(s)	293, 523, 1002, 1261
Bme18I	GGWCC	3 cut(s)	72, 673, 979
BmeRI	GACNNNNNGTC	2 cut(s)	271, 274
BmeT110I	CYCGRG	1 cut(s)	1199
BmgT120I	GGNCC	5 cut(s)	72, 124, 349, 673, 979
BmiI	GGNNCC	8 cut(s)	221, 243, 567, 604, 711, 963, 1238, 1340
BmrFI	CCNGG	4 cut(s)	293, 523, 1002, 1261
BmrI	ACTGGG	2 cut(s)	121, 184
BmsI	GCATC	2 cut(s)	976, 1306
BmuI	ACTGGG	2 cut(s)	121, 184
BpiI	GAAGAC	4 cut(s)	156, 165, 180, 540
BplI	GAGNNNNNCTC	2 cut(s)	1336, 1368
BpmI	CTGGAG	1 cut(s)	1077
Bpu10I	CCTNAGC	1 cut(s)	439
Bpu14I	TTCGAA	1 cut(s)	54
BpuMI	CCSGG	1 cut(s)	523
BsaHI	GRCGYC	3 cut(s)	9, 231, 545
BsaI	GGTCTC	1 cut(s)	370
BsaJI	CCNNGG	3 cut(s)	1000, 1240, 1259
BsaWI	WCCGGW	1 cut(s)	533
BsaXI	ACNNNNNCTCC	8 cut(s)	59, 86, 89, 116, 647, 677, 755, 785
Bsc4I	CCNNNNNNNGG	2 cut(s)	957, 958
Bse118I	RCCGGY	1 cut(s)	121
Bse1I	ACTGG	4 cut(s)	74, 127, 190, 1286
Bse21I	CCTNAGG	1 cut(s)	882
Bse3DI	GCAATG	2 cut(s)	876, 1168
BseBI	CCWGG	3 cut(s)	293, 1002, 1261
BseDI	CCNNGG	3 cut(s)	1000, 1240, 1259
BseGI	GGATG	5 cut(s)	418, 625, 664, 1153, 1192
BseLI	CCNNNNNNNGG	2 cut(s)	957, 958
BseMI	GCAATG	2 cut(s)	876, 1168
BseMII	CTCAG	3 cut(s)	353, 873, 1154
BseNI	ACTGG	4 cut(s)	74, 127, 190, 1286
BseRI	GAGGAG	5 cut(s)	91, 755, 776, 899, 1351
BseSI	GKGCMC	1 cut(s)	1260
BseXI	GCAGC	7 cut(s)	334, 566, 862, 1084, 1206, 1251, 1306
BseYI	CCCAGC	2 cut(s)	46, 720
Bsh1236I	CGCG	3 cut(s)	225, 285, 327
BshFI	GGCC	3 cut(s)	125, 350, 1090
BshNI	GGYRCC	1 cut(s)	1236
BsiHKAI	GWGCWC	1 cut(s)	1231
BsiHKCI	CYCGRG	1 cut(s)	1199
BsiSI	CCGG	4 cut(s)	122, 369, 522, 534
BslI	CCNNNNNNNGG	2 cut(s)	957, 958
BsmAI	GTCTC	3 cut(s)	342, 370, 1109
BsmI	GAATGC	3 cut(s)	649, 816, 1078
BsnI	GGCC	3 cut(s)	125, 350, 1090
Bso31I	GGTCTC	1 cut(s)	370
BsoBI	CYCGRG	1 cut(s)	1199
Bsp119I	TTCGAA	1 cut(s)	54
Bsp1286I	GDGCHC	3 cut(s)	246, 1231, 1260
Bsp143I	GATC	7 cut(s)	106, 310, 424, 481, 602, 820, 1006
Bsp19I	CCATGG	1 cut(s)	1240
BspANI	GGCC	3 cut(s)	125, 350, 1090
BspCNI	CTCAG	3 cut(s)	352, 874, 1153
BspFNI	CGCG	3 cut(s)	225, 285, 327
BspHI	TCATGA	1 cut(s)	1009
BspLI	GGNNCC	8 cut(s)	221, 243, 567, 604, 711, 963, 1238, 1340
BspPI	GGATC	7 cut(s)	101, 318, 432, 476, 597, 610, 815
BspT104I	TTCGAA	1 cut(s)	54
BspT107I	GGYRCC	1 cut(s)	1236
BspTNI	GGTCTC	1 cut(s)	370
BsrBI	CCGCTC	1 cut(s)	217
BsrDI	GCAATG	2 cut(s)	876, 1168
BsrFI	RCCGGY	1 cut(s)	121
BsrI	ACTGG	4 cut(s)	74, 127, 190, 1286
BssAI	RCCGGY	1 cut(s)	121
BssECI	CCNNGG	3 cut(s)	1000, 1240, 1259
BssMI	GATC	7 cut(s)	106, 310, 424, 481, 602, 820, 1006
BssNI	GRCGYC	3 cut(s)	9, 231, 545
BssT1I	CCWWGG	1 cut(s)	1240
Bst2UI	CCWGG	3 cut(s)	293, 1002, 1261
Bst4CI	ACNGT	2 cut(s)	139, 668
Bst6I	CTCTTC	3 cut(s)	792, 828, 1125
BstACI	GRCGYC	3 cut(s)	9, 231, 545
BstAPI	GCANNNNNTGC	2 cut(s)	875, 1172
BstBI	TTCGAA	1 cut(s)	54
BstC8I	GCNNGC	2 cut(s)	123, 1088
BstDEI	CTNAG	4 cut(s)	339, 439, 882, 1140
BstDSI	CCRYGG	1 cut(s)	1240
BstF5I	GGATG	5 cut(s)	418, 625, 664, 1153, 1192
BstFNI	CGCG	3 cut(s)	225, 285, 327
BstHHI	GCGC	2 cut(s)	327, 1269
BstKTI	GATC	7 cut(s)	109, 313, 427, 484, 605, 823, 1009
BstMAI	GTCTC	3 cut(s)	342, 370, 1109
BstMBI	GATC	7 cut(s)	106, 310, 424, 481, 602, 820, 1006
BstMWI	GCNNNNNNNGC	5 cut(s)	331, 646, 875, 1172, 1264
BstNI	CCWGG	3 cut(s)	293, 1002, 1261
BstSCI	CCNGG	4 cut(s)	291, 521, 1000, 1259
BstSFI	CTRYAG	1 cut(s)	552
BstSLI	GKGCMC	1 cut(s)	1260
BstUI	CGCG	3 cut(s)	225, 285, 327
BstV1I	GCAGC	7 cut(s)	334, 566, 862, 1084, 1206, 1251, 1306
BstV2I	GAAGAC	4 cut(s)	156, 165, 180, 540
BstX2I	RGATCY	3 cut(s)	310, 424, 602
BstXI	CCANNNNNNTGG	1 cut(s)	683
BstYI	RGATCY	3 cut(s)	310, 424, 602
Bsu36I	CCTNAGG	1 cut(s)	882
BsuRI	GGCC	3 cut(s)	125, 350, 1090
BtgI	CCRYGG	1 cut(s)	1240
BtsCI	GGATG	5 cut(s)	418, 625, 664, 1153, 1192
BtsI	GCAGTG	1 cut(s)	1083
BtsIMutI	CAGTG	2 cut(s)	1083, 1134
Cac8I	GCNNGC	2 cut(s)	123, 1088
CaiI	CAGNNNCTG	1 cut(s)	976
CciI	TCATGA	1 cut(s)	1009
CfoI	GCGC	2 cut(s)	327, 1269
Cfr10I	RCCGGY	1 cut(s)	121
Cfr13I	GGNCC	5 cut(s)	72, 124, 349, 673, 979
CseI	GACGC	1 cut(s)	316
CsiI	ACCWGGT	1 cut(s)	291
Csp6I	GTAC	3 cut(s)	193, 664, 1237
CviAII	CATG	7 cut(s)	307, 677, 683, 983, 1010, 1241, 1355
CviQI	GTAC	3 cut(s)	193, 664, 1237
DdeI	CTNAG	4 cut(s)	339, 439, 882, 1140
DpnI	GATC	7 cut(s)	108, 312, 426, 483, 604, 822, 1008
DpnII	GATC	7 cut(s)	106, 310, 424, 481, 602, 820, 1006
DraIII	CACNNNGTG	1 cut(s)	1172
DriI	GACNNNNNGTC	2 cut(s)	271, 274
Eam1104I	CTCTTC	3 cut(s)	792, 828, 1125
Eam1105I	GACNNNNNGTC	2 cut(s)	271, 274
EarI	CTCTTC	3 cut(s)	792, 828, 1125
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	1 cut(s)	1240
Eco147I	AGGCCT	1 cut(s)	1090
Eco24I	GRGCYC	1 cut(s)	246
Eco31I	GGTCTC	1 cut(s)	370
Eco47I	GGWCC	3 cut(s)	72, 673, 979
Eco57I	CTGAAG	1 cut(s)	1110
Eco81I	CCTNAGG	1 cut(s)	882
Eco88I	CYCGRG	1 cut(s)	1199
EcoRI	GAATTC	1 cut(s)	946
EcoRII	CCWGG	3 cut(s)	291, 1000, 1259
EcoT14I	CCWWGG	1 cut(s)	1240
EcoT38I	GRGCYC	1 cut(s)	246
ErhI	CCWWGG	1 cut(s)	1240
FaeI	CATG	7 cut(s)	310, 680, 686, 986, 1013, 1244, 1358
FatI	CATG	7 cut(s)	306, 676, 682, 982, 1009, 1240, 1354
FauI	CCCGC	3 cut(s)	126, 575, 959
FbaI	TGATCA	1 cut(s)	1006
Fnu4HI	GCNGC	8 cut(s)	323, 373, 580, 876, 1098, 1220, 1265, 1320
FokI	GGATG	5 cut(s)	425, 632, 671, 1160, 1199
FriOI	GRGCYC	1 cut(s)	246
Fsp4HI	GCNGC	8 cut(s)	323, 373, 580, 876, 1098, 1220, 1265, 1320
FspI	TGCGCA	1 cut(s)	1268
GlaI	GCGC	2 cut(s)	326, 1268
GluI	GCNGC	8 cut(s)	323, 373, 580, 876, 1098, 1220, 1265, 1320
GsaI	CCCAGC	2 cut(s)	50, 724
GsuI	CTGGAG	1 cut(s)	1077
HaeIII	GGCC	3 cut(s)	125, 350, 1090
HapII	CCGG	4 cut(s)	122, 369, 522, 534
HgaI	GACGC	1 cut(s)	316
HhaI	GCGC	2 cut(s)	327, 1269
Hin1I	GRCGYC	3 cut(s)	9, 231, 545
Hin1II	CATG	7 cut(s)	310, 680, 686, 986, 1013, 1244, 1358
Hin6I	GCGC	2 cut(s)	325, 1267
HinP1I	GCGC	2 cut(s)	325, 1267
HinfI	GANTC	8 cut(s)	56, 530, 608, 725, 839, 967, 1117, 1138
HpaII	CCGG	4 cut(s)	122, 369, 522, 534
HphI	GGTGA	7 cut(s)	4, 127, 548, 643, 680, 698, 1016
Hpy166II	GTNNAC	1 cut(s)	142
Hpy188III	TCNNGA	9 cut(s)	110, 428, 485, 824, 881, 971, 1010, 1114, 1142
Hpy8I	GTNNAC	1 cut(s)	142
Hpy99I	CGWCG	9 cut(s)	35, 158, 215, 230, 233, 236, 269, 332, 547
HpyAV	CCTTC	5 cut(s)	29, 61, 504, 1134, 1150
HpyCH4III	ACNGT	2 cut(s)	139, 668
HpyCH4IV	ACGT	4 cut(s)	9, 33, 231, 545
HpyCH4V	TGCA	5 cut(s)	649, 1076, 1166, 1182, 1251
HpyF10VI	GCNNNNNNNGC	5 cut(s)	331, 646, 875, 1172, 1264
HpyF3I	CTNAG	4 cut(s)	339, 439, 882, 1140
HpySE526I	ACGT	4 cut(s)	9, 33, 231, 545
Hsp92I	GRCGYC	3 cut(s)	9, 231, 545
Hsp92II	CATG	7 cut(s)	310, 680, 686, 986, 1013, 1244, 1358
HspAI	GCGC	2 cut(s)	325, 1267
KpnI	GGTACC	1 cut(s)	1240
KroI	GCCGGC	1 cut(s)	121
KroNI	GCCGGC	1 cut(s)	123
Ksp22I	TGATCA	1 cut(s)	1006
Kzo9I	GATC	7 cut(s)	106, 310, 424, 481, 602, 820, 1006
LmnI	GCTCC	7 cut(s)	241, 565, 742, 883, 961, 973, 1338
Lsp1109I	GCAGC	7 cut(s)	334, 566, 862, 1084, 1206, 1251, 1306
LweI	GCATC	2 cut(s)	976, 1306
MabI	ACCWGGT	1 cut(s)	291
MaeII	ACGT	4 cut(s)	9, 33, 231, 545
MaeIII	GTNAC	4 cut(s)	10, 133, 343, 1135
MalI	GATC	7 cut(s)	108, 312, 426, 483, 604, 822, 1008
MbiI	CCGCTC	1 cut(s)	217
MboI	GATC	7 cut(s)	106, 310, 424, 481, 602, 820, 1006
MfeI	CAATTG	1 cut(s)	955
MflI	RGATCY	3 cut(s)	310, 424, 602
MhlI	GDGCHC	3 cut(s)	246, 1231, 1260
MluCI	AATT	8 cut(s)	247, 298, 400, 469, 922, 946, 955, 1102
MlyI	GAGTC	3 cut(s)	617, 1111, 1132
MmeI	TCCRAC	4 cut(s)	102, 282, 402, 507
MroNI	GCCGGC	1 cut(s)	121
MslI	CAYNNNNRTG	1 cut(s)	681
MspA1I	CMGCKG	2 cut(s)	1031, 1097
MspI	CCGG	4 cut(s)	122, 369, 522, 534
MspR9I	CCNGG	4 cut(s)	293, 523, 1002, 1261
MunI	CAATTG	1 cut(s)	955
Mva1269I	GAATGC	3 cut(s)	649, 816, 1078
MvaI	CCWGG	3 cut(s)	293, 1002, 1261
MvnI	CGCG	3 cut(s)	225, 285, 327
MwoI	GCNNNNNNNGC	5 cut(s)	331, 646, 875, 1172, 1264
NaeI	GCCGGC	1 cut(s)	123
NciI	CCSGG	1 cut(s)	523
NcoI	CCATGG	1 cut(s)	1240
NdeII	GATC	7 cut(s)	106, 310, 424, 481, 602, 820, 1006
NgoMIV	GCCGGC	1 cut(s)	121
NlaIII	CATG	7 cut(s)	310, 680, 686, 986, 1013, 1244, 1358
NlaIV	GGNNCC	8 cut(s)	221, 243, 567, 604, 711, 963, 1238, 1340
NmeAIII	GCCGAG	1 cut(s)	845
NmuCI	GTSAC	3 cut(s)	10, 133, 1135
NsbI	TGCGCA	1 cut(s)	1268
NspV	TTCGAA	1 cut(s)	54
PagI	TCATGA	1 cut(s)	1009
PceI	AGGCCT	1 cut(s)	1090
PcsI	WCGNNNNNNNCGW	2 cut(s)	150, 174
PctI	GAATGC	3 cut(s)	649, 816, 1078
PdiI	GCCGGC	1 cut(s)	123
PfeI	GAWTC	5 cut(s)	56, 530, 725, 839, 967
PflFI	GACNNNGTC	1 cut(s)	230
PkrI	GCNGC	8 cut(s)	324, 374, 581, 877, 1099, 1221, 1266, 1321
PleI	GAGTC	3 cut(s)	616, 1111, 1132
PpsI	GAGTC	3 cut(s)	616, 1111, 1132
Psp6I	CCWGG	3 cut(s)	291, 1000, 1259
PspFI	CCCAGC	2 cut(s)	46, 720
PspGI	CCWGG	3 cut(s)	291, 1000, 1259
PspN4I	GGNNCC	8 cut(s)	221, 243, 567, 604, 711, 963, 1238, 1340
PspPI	GGNCC	5 cut(s)	72, 124, 349, 673, 979
PstNI	CAGNNNCTG	1 cut(s)	976
PsuI	RGATCY	3 cut(s)	310, 424, 602
PsyI	GACNNNGTC	1 cut(s)	230
PvuII	CAGCTG	1 cut(s)	1097
RsaI	GTAC	3 cut(s)	194, 665, 1238
RsaNI	GTAC	3 cut(s)	193, 664, 1237
RseI	CAYNNNNRTG	1 cut(s)	681
SatI	GCNGC	8 cut(s)	323, 373, 580, 876, 1098, 1220, 1265, 1320
Sau3AI	GATC	7 cut(s)	106, 310, 424, 481, 602, 820, 1006
Sau96I	GGNCC	5 cut(s)	72, 124, 349, 673, 979
SchI	GAGTC	3 cut(s)	617, 1111, 1132
ScrFI	CCNGG	4 cut(s)	293, 523, 1002, 1261
SduI	GDGCHC	3 cut(s)	246, 1231, 1260
SexAI	ACCWGGT	1 cut(s)	291
SfaNI	GCATC	2 cut(s)	976, 1306
SfcI	CTRYAG	1 cut(s)	552
SfuI	TTCGAA	1 cut(s)	54
SinI	GGWCC	3 cut(s)	72, 673, 979
SmiMI	CAYNNNNRTG	1 cut(s)	681
Sse9I	AATT	8 cut(s)	247, 298, 400, 469, 922, 946, 955, 1102
SseBI	AGGCCT	1 cut(s)	1090
StuI	AGGCCT	1 cut(s)	1090
StyD4I	CCNGG	4 cut(s)	291, 521, 1000, 1259
StyI	CCWWGG	1 cut(s)	1240
TaaI	ACNGT	2 cut(s)	139, 668
TaiI	ACGT	4 cut(s)	12, 36, 234, 548
TaqI	TCGA	7 cut(s)	54, 87, 330, 429, 733, 1113, 1294
TasI	AATT	8 cut(s)	247, 298, 400, 469, 922, 946, 955, 1102
TauI	GCSGC	1 cut(s)	375
TfiI	GAWTC	5 cut(s)	56, 530, 725, 839, 967
TscAI	CASTG	2 cut(s)	1083, 1134
TseFI	GTSAC	3 cut(s)	10, 133, 1135
TseI	GCWGC	7 cut(s)	322, 579, 875, 1097, 1219, 1264, 1319
Tsp45I	GTSAC	3 cut(s)	10, 133, 1135
TspDTI	ATGAA	3 cut(s)	504, 671, 846
TspGWI	ACGGA	1 cut(s)	346
TspRI	CASTG	2 cut(s)	1083, 1134
Tth111I	GACNNNGTC	1 cut(s)	230
VpaK11BI	GGWCC	3 cut(s)	72, 673, 979
XapI	RAATTY	2 cut(s)	922, 946
ZraI	GACGTC	3 cut(s)	10, 232, 546

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.