Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0011050

Physical Location & Seq

Genomic Coordinates Forward (+)

4334506 .. 4336620

Gene Structure 2115 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG062200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1374 bp

ATGGCGGAAGTCACCTACCTTCAAATCCACGACCTAGAAGAAAACCCCGCCTTCGAATCCCTCCCCTACTGGTCCTCCAACGACTTCGACCTCTACATCTCCTCCGATCCCGATTTCCCGCCGGCCCAGTTCGTCACCGTCCACGAAGAAGACGACGAAGACTTCGACGGCGAAGACGATATCTTTTCCCAGTACCATTCCACAATCCACGCCGAGCGGAGCCGCGACGACGTCGTTTCGGAGCCCAATTCCATTTCCAACACCGACGACTTGTCGTCGGACCGCGAGAACCAGGTCAATTTCGTCATGGATCTGTTCCAGCAGCGCGTCGAGCAGTCTCAGGTAACGGCCCGTTCCGTTTTGGTCTCCGGCGACTCCGATTTTGGGGTTGTGGAGGGGAATTGCAATATGGATGATGGGTTGGATCTGGATTTGAGTTTAGGGTTAGGGTTAGATTTTAGGAATTGTTTTGATGATCCTGATGAAGATGACTTCTTTGTGGGAAGGAGGGTTTCCGGGTCGGAATCCGGTGAGGCGACGTCTTCTGTAGGTAGGGTGGAGCCGTTTGAGAGCTGCGTGAGGCTCGTCGGGTTTGGATCCGAGTCTGATGAGGATGAGAATGGGGTGATTGGGCTTGATTTGCATTCGGAGGATGAGTATGGTGAGGACCATGTTCATGGTGATTACGATGACGAAACGGGGGTTCCTCTATGCTGGGATTCGCTTCGATTGGAGGAGCAGAGGGAGAGTAATGAGGAGTTTGAGTGGGAAGAAGTTGATGGTAGGGTGGAAGAGGTTTTCGGAATGCTTGTTGATCCTGAGAATGAGGAGGAATCGGGGTCTGTTTCGGTTTCTCTTTCGGCGATGGCTGCTCCTGAGGAGGAAGTGAGGGTGGAGAGAGTTGAAGCTCTGGGGAATTTGGAATGGGAAGTGTTGCTGAATTCCCGCAATTGGGAGCCGAATCAGGAGCTGGACCATGATGCTGAACATTTCCCTGGTGATCACGATGACTACATCTACACTGCCGAATATGATATGTTGTTTGGGCAGTTTTCCGAGAATGAGAATGCGGTGATGGGCAGGCCTCCGGCTGCTAATTCTGTTGTTGAGACTCTTCCTTCAGTGGTTGTGACTCAGGAGGATGTGGAGAATGGCAATGCACTCTGTGCGGTATGCAAGGATGATATTACTCTCGGGGAGCAAGGAAAGAAGCTGCCTTGTGCACATAGGTACCATGGCGATTGCATTGTGCCTTGGCTGCGCATTAGGAATACTTGTCCAGTTTGTCGATATGAGTTGCGTACTGATGATGCTGCTTATGAGCGTAGGAGGAGCCAGGGGACAGCTCATGGACTGAACTTTGGGCAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009987 GO:0010026 GO:0010154 GO:0016043 GO:0016049 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022412 GO:0022414 GO:0030154 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0036211 GO:0040007 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048316 GO:0048468 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0060560 GO:0061458 GO:0070647 GO:0071704 GO:0071840 GO:0090376 GO:0090378 GO:0090558 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

457

Amino Acids

51.5

Weight (kDa)

4.05

Isoelectric Point (pI)

44.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	388 - 430	1.9e-11	Ring finger domain
zf-RING_11	PF17123	389 - 416	3.2e-07	RING-like zinc finger
zf-C3HC4_2	PF13923	389 - 429	3.1e-07	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	389 - 429	3.6e-06	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	406 - 430	7.1e-06	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08139 AT5G08139
fragaria_vesca	FvH4_5g13270
malus_domestica	MD06G1206700.v1.1
prunus_persica	Prupe.5G211100_v2.0.a1
pyrus_communis	pycom14g18010
rosa_chinensis	RchiOBHm_Chr7g0183901
rosa_laevigata	RLG00000005013 RLG00000033786
rosa_multiflora	Rmu_sc0001926.1_g000006 Rmu_sc0004712.1_g000033 Rmu_sc0007533.1_g000005 Rmu_sc0012562.1_g000017
rosa_roxburghii	Rroxscaffold_3G00270100
rosa_rugosa	Rorug06G0461300
rosa_samantha	Rh7AG062200 Rh7BG062400 Rh7CG063800 Rh7DG062200
rosa_wichuraiana	Rw7G005140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	234, 542
Acc16I	TGCGCA	1 cut(s)	1262
Acc65I	GGTACC	1 cut(s)	1230
AccB1I	GGYRCC	1 cut(s)	1230
AccBSI	CCGCTC	1 cut(s)	217
AccII	CGCG	3 cut(s)	225, 285, 327
AciI	CCGC	9 cut(s)	5, 48, 119, 217, 223, 283, 946, 1070, 1169
AclWI	GGATC	7 cut(s)	101, 318, 432, 470, 591, 604, 809
AcsI	RAATTY	2 cut(s)	916, 940
AcuI	CTGAAG	1 cut(s)	1104
AcyI	GRCGYC	2 cut(s)	231, 539
AdeI	CACNNNGTG	1 cut(s)	1166
AfaI	GTAC	3 cut(s)	194, 1232, 1303
AfiI	CCNNNNNNNGG	3 cut(s)	384, 951, 952
AgsI	TTSAA	2 cut(s)	23, 905
AhdI	GACNNNNNGTC	2 cut(s)	271, 274
AjnI	CCWGG	3 cut(s)	291, 994, 1335
AluBI	AGCT	5 cut(s)	573, 908, 970, 1213, 1346
AluI	AGCT	5 cut(s)	573, 908, 970, 1213, 1346
Alw21I	GWGCWC	1 cut(s)	1225
Alw26I	GTCTC	3 cut(s)	342, 370, 1103
Alw44I	GTGCAC	1 cut(s)	1221
AlwI	GGATC	7 cut(s)	101, 318, 432, 470, 591, 604, 809
AlwNI	CAGNNNCTG	1 cut(s)	970
Ama87I	CYCGRG	1 cut(s)	1193
AoxI	GGCC	3 cut(s)	123, 348, 1082
ApaLI	GTGCAC	1 cut(s)	1221
ApeKI	GCWGC	7 cut(s)	322, 573, 869, 1091, 1213, 1258, 1313
ApoI	RAATTY	2 cut(s)	916, 940
ArsI	GACNNNNNNTTYG	4 cut(s)	146, 178, 365, 397
Asp718I	GGTACC	1 cut(s)	1230
AspLEI	GCGC	2 cut(s)	327, 1263
AspS9I	GGNCC	6 cut(s)	72, 124, 280, 349, 667, 973
AsuC2I	CCSGG	1 cut(s)	517
AsuHPI	GGTGA	8 cut(s)	4, 127, 542, 637, 674, 692, 1010, 1084
AsuII	TTCGAA	1 cut(s)	54
AvaI	CYCGRG	1 cut(s)	1193
AvaII	GGWCC	4 cut(s)	72, 280, 667, 973
AxyI	CCTNAGG	1 cut(s)	876
BaeGI	GKGCMC	1 cut(s)	1225
BaeI	ACNNNNGTAYC	2 cut(s)	1214, 1247
BamHI	GGATCC	1 cut(s)	596
BanI	GGYRCC	1 cut(s)	1230
BanII	GRGCYC	1 cut(s)	246
BbsI	GAAGAC	4 cut(s)	156, 165, 180, 534
Bbv12I	GWGCWC	1 cut(s)	1225
BbvI	GCAGC	7 cut(s)	334, 560, 856, 1078, 1200, 1245, 1300
BccI	CCATC	4 cut(s)	410, 773, 859, 1069
BceAI	ACGGC	3 cut(s)	184, 363, 547
BciT130I	CCWGG	3 cut(s)	293, 996, 1337
BclI	TGATCA	1 cut(s)	1000
BcnI	CCSGG	1 cut(s)	517
BcoDI	GTCTC	3 cut(s)	342, 370, 1103
BfaI	CTAG	1 cut(s)	35
BfmI	CTRYAG	1 cut(s)	546
BisI	GCNGC	8 cut(s)	223, 323, 574, 870, 1092, 1214, 1259, 1314
BlsI	GCNGC	8 cut(s)	224, 324, 575, 871, 1093, 1215, 1260, 1315
Bme1390I	CCNGG	4 cut(s)	293, 517, 996, 1337
Bme18I	GGWCC	4 cut(s)	72, 280, 667, 973
BmeRI	GACNNNNNGTC	2 cut(s)	271, 274
BmeT110I	CYCGRG	1 cut(s)	1193
BmgT120I	GGNCC	6 cut(s)	72, 124, 280, 349, 667, 973
BmiI	GGNNCC	8 cut(s)	221, 243, 561, 598, 705, 957, 1232, 1334
BmrFI	CCNGG	4 cut(s)	293, 517, 996, 1337
BmrI	ACTGGG	2 cut(s)	121, 184
BmsI	GCATC	2 cut(s)	970, 1300
BmuI	ACTGGG	2 cut(s)	121, 184
BpiI	GAAGAC	4 cut(s)	156, 165, 180, 534
Bpu14I	TTCGAA	1 cut(s)	54
BpuMI	CCSGG	1 cut(s)	517
BsaHI	GRCGYC	2 cut(s)	231, 539
BsaI	GGTCTC	1 cut(s)	370
BsaJI	CCNNGG	4 cut(s)	994, 1234, 1253, 1336
BsaWI	WCCGGW	1 cut(s)	527
BsaXI	ACNNNNNCTCC	8 cut(s)	59, 86, 89, 116, 641, 671, 749, 779
Bsc4I	CCNNNNNNNGG	3 cut(s)	384, 951, 952
Bse118I	RCCGGY	1 cut(s)	121
Bse1I	ACTGG	4 cut(s)	74, 127, 190, 1280
Bse21I	CCTNAGG	1 cut(s)	876
Bse3DI	GCAATG	1 cut(s)	1162
BseBI	CCWGG	3 cut(s)	293, 996, 1337
BseDI	CCNNGG	4 cut(s)	994, 1234, 1253, 1336
BseGI	GGATG	5 cut(s)	418, 619, 658, 1147, 1186
BseLI	CCNNNNNNNGG	3 cut(s)	384, 951, 952
BseMI	GCAATG	1 cut(s)	1162
BseMII	CTCAG	4 cut(s)	353, 810, 867, 1148
BseNI	ACTGG	4 cut(s)	74, 127, 190, 1280
BseRI	GAGGAG	6 cut(s)	91, 749, 770, 842, 893, 1345
BseSI	GKGCMC	1 cut(s)	1225
BseXI	GCAGC	7 cut(s)	334, 560, 856, 1078, 1200, 1245, 1300
BseYI	CCCAGC	1 cut(s)	714
Bsh1236I	CGCG	3 cut(s)	225, 285, 327
BshFI	GGCC	3 cut(s)	125, 350, 1084
BshNI	GGYRCC	1 cut(s)	1230
BsiHKAI	GWGCWC	1 cut(s)	1225
BsiHKCI	CYCGRG	1 cut(s)	1193
BsiSI	CCGG	5 cut(s)	122, 369, 516, 528, 1088
BslFI	GGGAC	1 cut(s)	1354
BslI	CCNNNNNNNGG	3 cut(s)	384, 951, 952
BsmAI	GTCTC	3 cut(s)	342, 370, 1103
BsmFI	GGGAC	1 cut(s)	1354
BsmI	GAATGC	3 cut(s)	643, 810, 1072
BsnI	GGCC	3 cut(s)	125, 350, 1084
Bso31I	GGTCTC	1 cut(s)	370
BsoBI	CYCGRG	1 cut(s)	1193
Bsp119I	TTCGAA	1 cut(s)	54
Bsp1286I	GDGCHC	2 cut(s)	246, 1225
Bsp143I	GATC	7 cut(s)	106, 310, 424, 475, 596, 814, 1000
Bsp19I	CCATGG	1 cut(s)	1234
BspACI	CCGC	9 cut(s)	5, 48, 119, 217, 223, 283, 946, 1070, 1169
BspANI	GGCC	3 cut(s)	125, 350, 1084
BspCNI	CTCAG	4 cut(s)	352, 811, 868, 1147
BspFNI	CGCG	3 cut(s)	225, 285, 327
BspLI	GGNNCC	8 cut(s)	221, 243, 561, 598, 705, 957, 1232, 1334
BspPI	GGATC	7 cut(s)	101, 318, 432, 470, 591, 604, 809
BspT104I	TTCGAA	1 cut(s)	54
BspT107I	GGYRCC	1 cut(s)	1230
BspTNI	GGTCTC	1 cut(s)	370
BsrBI	CCGCTC	1 cut(s)	217
BsrDI	GCAATG	1 cut(s)	1162
BsrFI	RCCGGY	1 cut(s)	121
BsrI	ACTGG	4 cut(s)	74, 127, 190, 1280
BssAI	RCCGGY	1 cut(s)	121
BssECI	CCNNGG	4 cut(s)	994, 1234, 1253, 1336
BssMI	GATC	7 cut(s)	106, 310, 424, 475, 596, 814, 1000
BssNI	GRCGYC	2 cut(s)	231, 539
BssT1I	CCWWGG	2 cut(s)	1234, 1253
Bst2UI	CCWGG	3 cut(s)	293, 996, 1337
Bst4CI	ACNGT	1 cut(s)	139
Bst6I	CTCTTC	2 cut(s)	786, 1119
BstACI	GRCGYC	2 cut(s)	231, 539
BstAPI	GCANNNNNTGC	1 cut(s)	1166
BstBI	TTCGAA	1 cut(s)	54
BstC8I	GCNNGC	2 cut(s)	123, 1082
BstDEI	CTNAG	4 cut(s)	339, 819, 876, 1134
BstDSI	CCRYGG	1 cut(s)	1234
BstF5I	GGATG	5 cut(s)	418, 619, 658, 1147, 1186
BstFNI	CGCG	3 cut(s)	225, 285, 327
BstHHI	GCGC	2 cut(s)	327, 1263
BstKTI	GATC	7 cut(s)	109, 313, 427, 478, 599, 817, 1003
BstMAI	GTCTC	3 cut(s)	342, 370, 1103
BstMBI	GATC	7 cut(s)	106, 310, 424, 475, 596, 814, 1000
BstMWI	GCNNNNNNNGC	5 cut(s)	331, 640, 869, 1166, 1258
BstNI	CCWGG	3 cut(s)	293, 996, 1337
BstSCI	CCNGG	4 cut(s)	291, 515, 994, 1335
BstSFI	CTRYAG	1 cut(s)	546
BstSLI	GKGCMC	1 cut(s)	1225
BstUI	CGCG	3 cut(s)	225, 285, 327
BstV1I	GCAGC	7 cut(s)	334, 560, 856, 1078, 1200, 1245, 1300
BstV2I	GAAGAC	4 cut(s)	156, 165, 180, 534
BstX2I	RGATCY	3 cut(s)	310, 424, 596
BstXI	CCANNNNNNTGG	1 cut(s)	677
BstYI	RGATCY	3 cut(s)	310, 424, 596
Bsu36I	CCTNAGG	1 cut(s)	876
BsuRI	GGCC	3 cut(s)	125, 350, 1084
BtgI	CCRYGG	1 cut(s)	1234
BtgZI	GCGATG	1 cut(s)	878
BtsCI	GGATG	5 cut(s)	418, 619, 658, 1147, 1186
BtsI	GCAGTG	1 cut(s)	1020
BtsIMutI	CAGTG	2 cut(s)	1020, 1128
Cac8I	GCNNGC	2 cut(s)	123, 1082
CaiI	CAGNNNCTG	1 cut(s)	970
CfoI	GCGC	2 cut(s)	327, 1263
Cfr10I	RCCGGY	1 cut(s)	121
Cfr13I	GGNCC	6 cut(s)	72, 124, 280, 349, 667, 973
CpoI	CGGWCCG	1 cut(s)	280
CseI	GACGC	1 cut(s)	316
CsiI	ACCWGGT	1 cut(s)	291
Csp6I	GTAC	3 cut(s)	193, 1231, 1302
CspI	CGGWCCG	1 cut(s)	280
CviAII	CATG	6 cut(s)	307, 671, 677, 977, 1235, 1349
CviQI	GTAC	3 cut(s)	193, 1231, 1302
DdeI	CTNAG	4 cut(s)	339, 819, 876, 1134
DpnI	GATC	7 cut(s)	108, 312, 426, 477, 598, 816, 1002
DpnII	GATC	7 cut(s)	106, 310, 424, 475, 596, 814, 1000
DraIII	CACNNNGTG	1 cut(s)	1166
DriI	GACNNNNNGTC	2 cut(s)	271, 274
Eam1104I	CTCTTC	2 cut(s)	786, 1119
Eam1105I	GACNNNNNGTC	2 cut(s)	271, 274
EarI	CTCTTC	2 cut(s)	786, 1119
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	2 cut(s)	1234, 1253
Eco147I	AGGCCT	1 cut(s)	1084
Eco24I	GRGCYC	1 cut(s)	246
Eco31I	GGTCTC	1 cut(s)	370
Eco32I	GATATC	1 cut(s)	181
Eco47I	GGWCC	4 cut(s)	72, 280, 667, 973
Eco57I	CTGAAG	1 cut(s)	1104
Eco81I	CCTNAGG	1 cut(s)	876
Eco88I	CYCGRG	1 cut(s)	1193
EcoRI	GAATTC	1 cut(s)	940
EcoRII	CCWGG	3 cut(s)	291, 994, 1335
EcoRV	GATATC	1 cut(s)	181
EcoT14I	CCWWGG	2 cut(s)	1234, 1253
EcoT38I	GRGCYC	1 cut(s)	246
ErhI	CCWWGG	2 cut(s)	1234, 1253
FaeI	CATG	6 cut(s)	310, 674, 680, 980, 1238, 1352
FaqI	GGGAC	1 cut(s)	1354
FatI	CATG	6 cut(s)	306, 670, 676, 976, 1234, 1348
FauI	CCCGC	3 cut(s)	55, 126, 953
FbaI	TGATCA	1 cut(s)	1000
Fnu4HI	GCNGC	8 cut(s)	223, 323, 574, 870, 1092, 1214, 1259, 1314
FokI	GGATG	5 cut(s)	425, 626, 665, 1154, 1193
FriOI	GRGCYC	1 cut(s)	246
Fsp4HI	GCNGC	8 cut(s)	223, 323, 574, 870, 1092, 1214, 1259, 1314
FspBI	CTAG	1 cut(s)	35
FspI	TGCGCA	1 cut(s)	1262
GlaI	GCGC	2 cut(s)	326, 1262
GluI	GCNGC	8 cut(s)	223, 323, 574, 870, 1092, 1214, 1259, 1314
GsaI	CCCAGC	1 cut(s)	718
HaeIII	GGCC	3 cut(s)	125, 350, 1084
HapII	CCGG	5 cut(s)	122, 369, 516, 528, 1088
HgaI	GACGC	1 cut(s)	316
HhaI	GCGC	2 cut(s)	327, 1263
Hin1I	GRCGYC	2 cut(s)	231, 539
Hin1II	CATG	6 cut(s)	310, 674, 680, 980, 1238, 1352
Hin6I	GCGC	2 cut(s)	325, 1261
HinP1I	GCGC	2 cut(s)	325, 1261
HinfI	GANTC	9 cut(s)	56, 374, 524, 602, 719, 833, 961, 1111, 1132
HpaII	CCGG	5 cut(s)	122, 369, 516, 528, 1088
HphI	GGTGA	8 cut(s)	4, 127, 542, 637, 674, 692, 1010, 1084
Hpy166II	GTNNAC	2 cut(s)	142, 1223
Hpy188III	TCNNGA	8 cut(s)	110, 428, 479, 818, 875, 965, 1004, 1136
Hpy8I	GTNNAC	2 cut(s)	142, 1223
HpyAV	CCTTC	4 cut(s)	29, 61, 498, 1128
HpyCH4III	ACNGT	1 cut(s)	139
HpyCH4IV	ACGT	2 cut(s)	231, 539
HpyCH4V	TGCA	6 cut(s)	405, 643, 1160, 1176, 1223, 1245
HpyF10VI	GCNNNNNNNGC	5 cut(s)	331, 640, 869, 1166, 1258
HpyF3I	CTNAG	4 cut(s)	339, 819, 876, 1134
HpySE526I	ACGT	2 cut(s)	231, 539
Hsp92I	GRCGYC	2 cut(s)	231, 539
Hsp92II	CATG	6 cut(s)	310, 674, 680, 980, 1238, 1352
HspAI	GCGC	2 cut(s)	325, 1261
KpnI	GGTACC	1 cut(s)	1234
KroI	GCCGGC	1 cut(s)	121
KroNI	GCCGGC	1 cut(s)	123
Ksp22I	TGATCA	1 cut(s)	1000
Kzo9I	GATC	7 cut(s)	106, 310, 424, 475, 596, 814, 1000
LmnI	GCTCC	9 cut(s)	219, 241, 559, 736, 877, 955, 967, 1198, 1332
Lsp1109I	GCAGC	7 cut(s)	334, 560, 856, 1078, 1200, 1245, 1300
LweI	GCATC	2 cut(s)	970, 1300
MabI	ACCWGGT	1 cut(s)	291
MaeI	CTAG	1 cut(s)	35
MaeII	ACGT	2 cut(s)	231, 539
MaeIII	GTNAC	4 cut(s)	10, 133, 343, 1129
MalI	GATC	7 cut(s)	108, 312, 426, 477, 598, 816, 1002
MbiI	CCGCTC	1 cut(s)	217
MboI	GATC	7 cut(s)	106, 310, 424, 475, 596, 814, 1000
MfeI	CAATTG	1 cut(s)	949
MflI	RGATCY	3 cut(s)	310, 424, 596
MhlI	GDGCHC	2 cut(s)	246, 1225
MluCI	AATT	8 cut(s)	247, 298, 400, 463, 916, 940, 949, 1096
MlyI	GAGTC	4 cut(s)	368, 611, 1105, 1126
MmeI	TCCRAC	5 cut(s)	102, 258, 282, 402, 501
MroNI	GCCGGC	1 cut(s)	121
MslI	CAYNNNNRTG	1 cut(s)	675
MspI	CCGG	5 cut(s)	122, 369, 516, 528, 1088
MspR9I	CCNGG	4 cut(s)	293, 517, 996, 1337
MunI	CAATTG	1 cut(s)	949
Mva1269I	GAATGC	3 cut(s)	643, 810, 1072
MvaI	CCWGG	3 cut(s)	293, 996, 1337
MvnI	CGCG	3 cut(s)	225, 285, 327
MwoI	GCNNNNNNNGC	5 cut(s)	331, 640, 869, 1166, 1258
NaeI	GCCGGC	1 cut(s)	123
NciI	CCSGG	1 cut(s)	517
NcoI	CCATGG	1 cut(s)	1234
NdeII	GATC	7 cut(s)	106, 310, 424, 475, 596, 814, 1000
NgoMIV	GCCGGC	1 cut(s)	121
NlaIII	CATG	6 cut(s)	310, 674, 680, 980, 1238, 1352
NlaIV	GGNNCC	8 cut(s)	221, 243, 561, 598, 705, 957, 1232, 1334
NmeAIII	GCCGAG	1 cut(s)	238
NmuCI	GTSAC	3 cut(s)	10, 133, 1129
NsbI	TGCGCA	1 cut(s)	1262
NspV	TTCGAA	1 cut(s)	54
PceI	AGGCCT	1 cut(s)	1084
PcsI	WCGNNNNNNNCGW	3 cut(s)	150, 162, 174
PctI	GAATGC	3 cut(s)	643, 810, 1072
PdiI	GCCGGC	1 cut(s)	123
PfeI	GAWTC	5 cut(s)	56, 524, 719, 833, 961
PflFI	GACNNNGTC	1 cut(s)	230
PkrI	GCNGC	8 cut(s)	224, 324, 575, 871, 1093, 1215, 1260, 1315
PleI	GAGTC	4 cut(s)	368, 610, 1105, 1126
PpsI	GAGTC	4 cut(s)	368, 610, 1105, 1126
Psp6I	CCWGG	3 cut(s)	291, 994, 1335
PspFI	CCCAGC	1 cut(s)	714
PspGI	CCWGG	3 cut(s)	291, 994, 1335
PspN4I	GGNNCC	8 cut(s)	221, 243, 561, 598, 705, 957, 1232, 1334
PspPI	GGNCC	6 cut(s)	72, 124, 280, 349, 667, 973
PstNI	CAGNNNCTG	1 cut(s)	970
PsuI	RGATCY	3 cut(s)	310, 424, 596
PsyI	GACNNNGTC	1 cut(s)	230
RsaI	GTAC	3 cut(s)	194, 1232, 1303
RsaNI	GTAC	3 cut(s)	193, 1231, 1302
RseI	CAYNNNNRTG	1 cut(s)	675
Rsr2I	CGGWCCG	1 cut(s)	280
RsrII	CGGWCCG	1 cut(s)	280
SatI	GCNGC	8 cut(s)	223, 323, 574, 870, 1092, 1214, 1259, 1314
Sau3AI	GATC	7 cut(s)	106, 310, 424, 475, 596, 814, 1000
Sau96I	GGNCC	6 cut(s)	72, 124, 280, 349, 667, 973
SchI	GAGTC	4 cut(s)	368, 611, 1105, 1126
ScrFI	CCNGG	4 cut(s)	293, 517, 996, 1337
SduI	GDGCHC	2 cut(s)	246, 1225
SexAI	ACCWGGT	1 cut(s)	291
SfaNI	GCATC	2 cut(s)	970, 1300
SfcI	CTRYAG	1 cut(s)	546
SfuI	TTCGAA	1 cut(s)	54
SinI	GGWCC	4 cut(s)	72, 280, 667, 973
SmiMI	CAYNNNNRTG	1 cut(s)	675
Sse9I	AATT	8 cut(s)	247, 298, 400, 463, 916, 940, 949, 1096
SseBI	AGGCCT	1 cut(s)	1084
SsiI	CCGC	9 cut(s)	5, 48, 119, 217, 223, 283, 946, 1070, 1169
SspMI	CTAG	1 cut(s)	35
StuI	AGGCCT	1 cut(s)	1084
StyD4I	CCNGG	4 cut(s)	291, 515, 994, 1335
StyI	CCWWGG	2 cut(s)	1234, 1253
TaaI	ACNGT	1 cut(s)	139
TaiI	ACGT	2 cut(s)	234, 542
TaqI	TCGA	6 cut(s)	54, 87, 165, 330, 727, 1288
TasI	AATT	8 cut(s)	247, 298, 400, 463, 916, 940, 949, 1096
TauI	GCSGC	1 cut(s)	225
TfiI	GAWTC	5 cut(s)	56, 524, 719, 833, 961
TscAI	CASTG	2 cut(s)	1027, 1128
TseFI	GTSAC	3 cut(s)	10, 133, 1129
TseI	GCWGC	7 cut(s)	322, 573, 869, 1091, 1213, 1258, 1313
Tsp45I	GTSAC	3 cut(s)	10, 133, 1129
TspDTI	ATGAA	2 cut(s)	498, 665
TspGWI	ACGGA	1 cut(s)	346
TspRI	CASTG	2 cut(s)	1027, 1128
Tth111I	GACNNNGTC	1 cut(s)	230
VneI	GTGCAC	1 cut(s)	1221
VpaK11BI	GGWCC	4 cut(s)	72, 280, 667, 973
XapI	RAATTY	2 cut(s)	916, 940
XspI	CTAG	1 cut(s)	35
ZraI	GACGTC	2 cut(s)	232, 540

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.