Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0011050

Physical Location & Seq

Genomic Coordinates Reverse (-)

62751453 .. 62752832

Gene Structure 1380 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00270100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1380 bp

ATGGCGGAAGTCACCTACCTTCAAATCCACGACCTTGAAGAAAACCCAGCCTTCGAATCCCTCCCCTACTGGTCCTCCAACGACTTCGACCTCTACATCTCCTCCGATCCCGATTTCCCGCCGGCCCAGTTCGTCACCGTCCACGAAGAAGACGACGAAGACTTTGACGGCGAAGACGACATCTTTTCCCAGTACCATTCCACAATCCACGCCGAGCGGAACCGCGACGACGTCGTTTCGGAGCCCAATTCCATTTCCAACACCGACGACTTGTCGTCGGACCGCGAGAACCAGGTCAATTTCGTCATGGATCTGTTCCAGCAGCGCGTCGAGCAGTCTCAGGTAACGGCCCGTTCCGTTGTGGTCTCCGGCGACTCCGATTTTGGGGTTGTGGAGGGGAATTGCGATATGGATGATGGGTTGGATCTCGATTTGAGTTTAGGGTTAGGGTTAGGTTTAGATTTTAGGAATTGTTTTGATGATCCTGATGAAGATGACTTCTTTGTGGGAAGGAGGGTTTCCGGGTCGGAATCCGGTGAGGCGACGTCTTCTGTAGGTAGGGTGGAGCCGTTTGAGAGCTGCGTGAGGCTCGTTGGGTTTGGATCCGAGTCTGATGAGGATGAGAATGGGGTGATTGGGCTTGATTTGCATTCGGAGGATGAGTATGGTGACGACCATGTTCATGGTGATTACGATGACGAAACGGGGGTTCCTCTATGCTGGGATTCGCTTCGATTGGAGGAGCAGAGGGAGAGTAATGAGGAGTTTGAGTGGGAAGAAGTTGATGGTAGGGTGGAAGAGGTTTTCGGAATGCTTGTTGATCCTGATAATGAGGAGGAATCGGGGTCTGTTTCGGTTTCGCTTTCGGCGATGGCTGCTCCTGAGGAGGAAGTGAGTGTGGAGAGAGTTGAAGCTCTGGGGAATTTGGAATGGGAAGTGTTGTTGAATTCCCGCAATTGGGAGCCGAATCAGGAGCTGGACCATGACGCTGAACATTTCCCTGGTGATCATGATGACTACATCTACACTGCAGAATATGATATGTTGTTTGGGCAGTTTTCCGAGAATGAGAATGCGGTGATGGGCAGGCCTCCGGCTGCTAATTCTGTTGTCGAGACTCTTCCCTCCGTGGTTGTGACTCAGGAGGATGTTGAGAAGGGCAATGCACTCTGTGCTGTATGCAAGGATGATATTAGTCTCGGGGAAGAAGGAAAGAAGCTGCCTTGTGCACATAGGTACCATGGCGAGTGCATTGTGCCGTGGCTGCGCATTAGGAATACATGTCCAGTTTGTCGATATGAGTTGCCTACCGATGATGCTGCTTATGAGCGTAGGAGTAGCCAGAGGACAGCTCATGGGCTGAACTTTGGGCAGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009987 GO:0010026 GO:0010154 GO:0016043 GO:0016049 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022412 GO:0022414 GO:0030154 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0036211 GO:0040007 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048316 GO:0048468 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0060560 GO:0061458 GO:0070647 GO:0071704 GO:0071840 GO:0090376 GO:0090378 GO:0090558 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

459

Amino Acids

51.53

Weight (kDa)

4.05

Isoelectric Point (pI)

43.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	390 - 432	9.9e-12	Ring finger domain
zf-C3HC4_2	PF13923	391 - 431	1.8e-07	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	391 - 418	6.8e-07	RING-like zinc finger
zf-C3HC4	PF00097	391 - 431	3.3e-06	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	408 - 432	5.6e-06	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08139 AT5G08139
fragaria_vesca	FvH4_5g13270
malus_domestica	MD06G1206700.v1.1
prunus_persica	Prupe.5G211100_v2.0.a1
pyrus_communis	pycom14g18010
rosa_chinensis	RchiOBHm_Chr7g0183901
rosa_laevigata	RLG00000005013 RLG00000033786
rosa_multiflora	Rmu_sc0001926.1_g000006 Rmu_sc0004712.1_g000033 Rmu_sc0007533.1_g000005 Rmu_sc0012562.1_g000017
rosa_roxburghii	Rroxscaffold_3G00270100
rosa_rugosa	Rorug06G0461300
rosa_samantha	Rh7AG062200 Rh7BG062400 Rh7CG063800 Rh7DG062200
rosa_wichuraiana	Rw7G005140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	234, 548
Acc16I	TGCGCA	1 cut(s)	1268
Acc65I	GGTACC	1 cut(s)	1236
AccB1I	GGYRCC	1 cut(s)	1236
AccBSI	CCGCTC	1 cut(s)	217
AccII	CGCG	3 cut(s)	225, 285, 327
AciI	CCGC	7 cut(s)	5, 119, 217, 223, 283, 952, 1076
AclWI	GGATC	7 cut(s)	101, 318, 432, 476, 597, 610, 815
AcsI	RAATTY	2 cut(s)	922, 946
AcyI	GRCGYC	2 cut(s)	231, 545
AdeI	CACNNNGTG	1 cut(s)	1172
AfaI	GTAC	2 cut(s)	194, 1238
AfiI	CCNNNNNNNGG	3 cut(s)	384, 957, 958
AflIII	ACRYGT	1 cut(s)	1280
AgsI	TTSAA	4 cut(s)	23, 38, 911, 946
AhdI	GACNNNNNGTC	2 cut(s)	271, 274
AjnI	CCWGG	2 cut(s)	291, 1000
AluBI	AGCT	5 cut(s)	579, 914, 976, 1219, 1352
AluI	AGCT	5 cut(s)	579, 914, 976, 1219, 1352
Alw21I	GWGCWC	1 cut(s)	1231
Alw26I	GTCTC	4 cut(s)	342, 370, 1109, 1202
Alw44I	GTGCAC	1 cut(s)	1227
AlwI	GGATC	7 cut(s)	101, 318, 432, 476, 597, 610, 815
AlwNI	CAGNNNCTG	1 cut(s)	976
Ama87I	CYCGRG	1 cut(s)	1199
AoxI	GGCC	3 cut(s)	123, 348, 1088
ApaLI	GTGCAC	1 cut(s)	1227
ApeKI	GCWGC	7 cut(s)	322, 579, 875, 1097, 1219, 1264, 1319
ApoI	RAATTY	2 cut(s)	922, 946
ArsI	GACNNNNNNTTYG	4 cut(s)	146, 178, 365, 397
Asp718I	GGTACC	1 cut(s)	1236
AspLEI	GCGC	2 cut(s)	327, 1269
AspS9I	GGNCC	5 cut(s)	72, 124, 280, 349, 979
AsuC2I	CCSGG	1 cut(s)	523
AsuHPI	GGTGA	8 cut(s)	4, 127, 548, 643, 680, 698, 1016, 1090
AsuII	TTCGAA	1 cut(s)	54
AvaI	CYCGRG	1 cut(s)	1199
AvaII	GGWCC	3 cut(s)	72, 280, 979
AxyI	CCTNAGG	1 cut(s)	882
BaeGI	GKGCMC	1 cut(s)	1231
BaeI	ACNNNNGTAYC	2 cut(s)	1220, 1253
BamHI	GGATCC	1 cut(s)	602
BanI	GGYRCC	1 cut(s)	1236
BanII	GRGCYC	1 cut(s)	246
BbsI	GAAGAC	4 cut(s)	156, 165, 180, 540
Bbv12I	GWGCWC	1 cut(s)	1231
BbvI	GCAGC	7 cut(s)	334, 566, 862, 1084, 1206, 1251, 1306
BccI	CCATC	4 cut(s)	410, 779, 865, 1075
BceAI	ACGGC	4 cut(s)	184, 363, 553, 1243
BcgI	CGANNNNNNTGC	2 cut(s)	1301, 1335
BciT130I	CCWGG	2 cut(s)	293, 1002
BclI	TGATCA	1 cut(s)	1006
BcnI	CCSGG	1 cut(s)	523
BcoDI	GTCTC	4 cut(s)	342, 370, 1109, 1202
BfmI	CTRYAG	2 cut(s)	552, 1029
BisI	GCNGC	7 cut(s)	323, 580, 876, 1098, 1220, 1265, 1320
BlsI	GCNGC	7 cut(s)	324, 581, 877, 1099, 1221, 1266, 1321
Bme1390I	CCNGG	3 cut(s)	293, 523, 1002
Bme18I	GGWCC	3 cut(s)	72, 280, 979
BmeRI	GACNNNNNGTC	2 cut(s)	271, 274
BmeT110I	CYCGRG	1 cut(s)	1199
BmgT120I	GGNCC	5 cut(s)	72, 124, 280, 349, 979
BmiI	GGNNCC	7 cut(s)	221, 243, 567, 604, 711, 963, 1238
BmrFI	CCNGG	3 cut(s)	293, 523, 1002
BmrI	ACTGGG	2 cut(s)	121, 184
BmsI	GCATC	1 cut(s)	1306
BmuI	ACTGGG	2 cut(s)	121, 184
BpiI	GAAGAC	4 cut(s)	156, 165, 180, 540
BplI	GAGNNNNNCTC	2 cut(s)	1336, 1368
Bpu14I	TTCGAA	1 cut(s)	54
BpuMI	CCSGG	1 cut(s)	523
BsaHI	GRCGYC	2 cut(s)	231, 545
BsaI	GGTCTC	1 cut(s)	370
BsaJI	CCNNGG	4 cut(s)	1000, 1128, 1240, 1259
BsaWI	WCCGGW	1 cut(s)	533
BsaXI	ACNNNNNCTCC	8 cut(s)	59, 86, 89, 116, 647, 677, 755, 785
Bsc4I	CCNNNNNNNGG	3 cut(s)	384, 957, 958
Bse118I	RCCGGY	1 cut(s)	121
Bse1I	ACTGG	4 cut(s)	74, 127, 190, 1286
Bse21I	CCTNAGG	1 cut(s)	882
Bse3DI	GCAATG	1 cut(s)	1168
BseBI	CCWGG	2 cut(s)	293, 1002
BseDI	CCNNGG	4 cut(s)	1000, 1128, 1240, 1259
BseGI	GGATG	5 cut(s)	418, 625, 664, 1153, 1192
BseLI	CCNNNNNNNGG	3 cut(s)	384, 957, 958
BseMI	GCAATG	1 cut(s)	1168
BseMII	CTCAG	3 cut(s)	353, 873, 1154
BseNI	ACTGG	4 cut(s)	74, 127, 190, 1286
BseRI	GAGGAG	5 cut(s)	91, 755, 776, 848, 899
BseSI	GKGCMC	1 cut(s)	1231
BseXI	GCAGC	7 cut(s)	334, 566, 862, 1084, 1206, 1251, 1306
BseYI	CCCAGC	2 cut(s)	46, 720
Bsh1236I	CGCG	3 cut(s)	225, 285, 327
BshFI	GGCC	3 cut(s)	125, 350, 1090
BshNI	GGYRCC	1 cut(s)	1236
BsiHKAI	GWGCWC	1 cut(s)	1231
BsiHKCI	CYCGRG	1 cut(s)	1199
BsiSI	CCGG	5 cut(s)	122, 369, 522, 534, 1094
BslI	CCNNNNNNNGG	3 cut(s)	384, 957, 958
BsmAI	GTCTC	4 cut(s)	342, 370, 1109, 1202
BsmI	GAATGC	3 cut(s)	649, 816, 1078
BsnI	GGCC	3 cut(s)	125, 350, 1090
Bso31I	GGTCTC	1 cut(s)	370
BsoBI	CYCGRG	1 cut(s)	1199
Bsp119I	TTCGAA	1 cut(s)	54
Bsp1286I	GDGCHC	2 cut(s)	246, 1231
Bsp143I	GATC	7 cut(s)	106, 310, 424, 481, 602, 820, 1006
Bsp19I	CCATGG	1 cut(s)	1240
BspACI	CCGC	7 cut(s)	5, 119, 217, 223, 283, 952, 1076
BspANI	GGCC	3 cut(s)	125, 350, 1090
BspCNI	CTCAG	3 cut(s)	352, 874, 1153
BspFNI	CGCG	3 cut(s)	225, 285, 327
BspHI	TCATGA	1 cut(s)	1009
BspLI	GGNNCC	7 cut(s)	221, 243, 567, 604, 711, 963, 1238
BspMAI	CTGCAG	1 cut(s)	1033
BspPI	GGATC	7 cut(s)	101, 318, 432, 476, 597, 610, 815
BspT104I	TTCGAA	1 cut(s)	54
BspT107I	GGYRCC	1 cut(s)	1236
BspTNI	GGTCTC	1 cut(s)	370
BsrBI	CCGCTC	1 cut(s)	217
BsrDI	GCAATG	1 cut(s)	1168
BsrFI	RCCGGY	1 cut(s)	121
BsrI	ACTGG	4 cut(s)	74, 127, 190, 1286
BssAI	RCCGGY	1 cut(s)	121
BssECI	CCNNGG	4 cut(s)	1000, 1128, 1240, 1259
BssMI	GATC	7 cut(s)	106, 310, 424, 481, 602, 820, 1006
BssNI	GRCGYC	2 cut(s)	231, 545
BssT1I	CCWWGG	1 cut(s)	1240
Bst2UI	CCWGG	2 cut(s)	293, 1002
Bst4CI	ACNGT	1 cut(s)	139
Bst6I	CTCTTC	2 cut(s)	792, 1125
BstACI	GRCGYC	2 cut(s)	231, 545
BstAPI	GCANNNNNTGC	1 cut(s)	1172
BstBI	TTCGAA	1 cut(s)	54
BstC8I	GCNNGC	2 cut(s)	123, 1088
BstDEI	CTNAG	3 cut(s)	339, 882, 1140
BstDSI	CCRYGG	3 cut(s)	1128, 1240, 1259
BstF5I	GGATG	5 cut(s)	418, 625, 664, 1153, 1192
BstFNI	CGCG	3 cut(s)	225, 285, 327
BstHHI	GCGC	2 cut(s)	327, 1269
BstKTI	GATC	7 cut(s)	109, 313, 427, 484, 605, 823, 1009
BstMAI	GTCTC	4 cut(s)	342, 370, 1109, 1202
BstMBI	GATC	7 cut(s)	106, 310, 424, 481, 602, 820, 1006
BstMWI	GCNNNNNNNGC	5 cut(s)	331, 646, 875, 1172, 1264
BstNI	CCWGG	2 cut(s)	293, 1002
BstNSI	RCATGY	1 cut(s)	1284
BstSCI	CCNGG	3 cut(s)	291, 521, 1000
BstSFI	CTRYAG	2 cut(s)	552, 1029
BstSLI	GKGCMC	1 cut(s)	1231
BstUI	CGCG	3 cut(s)	225, 285, 327
BstV1I	GCAGC	7 cut(s)	334, 566, 862, 1084, 1206, 1251, 1306
BstV2I	GAAGAC	4 cut(s)	156, 165, 180, 540
BstX2I	RGATCY	3 cut(s)	310, 424, 602
BstXI	CCANNNNNNTGG	1 cut(s)	683
BstYI	RGATCY	3 cut(s)	310, 424, 602
Bsu36I	CCTNAGG	1 cut(s)	882
BsuRI	GGCC	3 cut(s)	125, 350, 1090
BtgI	CCRYGG	3 cut(s)	1128, 1240, 1259
BtgZI	GCGATG	1 cut(s)	884
BtsCI	GGATG	5 cut(s)	418, 625, 664, 1153, 1192
BtsI	GCAGTG	1 cut(s)	1026
BtsIMutI	CAGTG	1 cut(s)	1026
Cac8I	GCNNGC	2 cut(s)	123, 1088
CaiI	CAGNNNCTG	1 cut(s)	976
CciI	TCATGA	1 cut(s)	1009
CfoI	GCGC	2 cut(s)	327, 1269
Cfr10I	RCCGGY	1 cut(s)	121
Cfr13I	GGNCC	5 cut(s)	72, 124, 280, 349, 979
CpoI	CGGWCCG	1 cut(s)	280
CseI	GACGC	2 cut(s)	316, 995
CsiI	ACCWGGT	1 cut(s)	291
Csp6I	GTAC	2 cut(s)	193, 1237
CspI	CGGWCCG	1 cut(s)	280
CviAII	CATG	8 cut(s)	307, 677, 683, 983, 1010, 1241, 1281, 1355
CviQI	GTAC	2 cut(s)	193, 1237
DdeI	CTNAG	3 cut(s)	339, 882, 1140
DpnI	GATC	7 cut(s)	108, 312, 426, 483, 604, 822, 1008
DpnII	GATC	7 cut(s)	106, 310, 424, 481, 602, 820, 1006
DraIII	CACNNNGTG	1 cut(s)	1172
DriI	GACNNNNNGTC	2 cut(s)	271, 274
Eam1104I	CTCTTC	2 cut(s)	792, 1125
Eam1105I	GACNNNNNGTC	2 cut(s)	271, 274
EarI	CTCTTC	2 cut(s)	792, 1125
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	1 cut(s)	1240
Eco147I	AGGCCT	1 cut(s)	1090
Eco24I	GRGCYC	1 cut(s)	246
Eco31I	GGTCTC	1 cut(s)	370
Eco47I	GGWCC	3 cut(s)	72, 280, 979
Eco81I	CCTNAGG	1 cut(s)	882
Eco88I	CYCGRG	1 cut(s)	1199
EcoRI	GAATTC	1 cut(s)	946
EcoRII	CCWGG	2 cut(s)	291, 1000
EcoT14I	CCWWGG	1 cut(s)	1240
EcoT38I	GRGCYC	1 cut(s)	246
ErhI	CCWWGG	1 cut(s)	1240
FaeI	CATG	8 cut(s)	310, 680, 686, 986, 1013, 1244, 1284, 1358
FatI	CATG	8 cut(s)	306, 676, 682, 982, 1009, 1240, 1280, 1354
FauI	CCCGC	2 cut(s)	126, 959
FbaI	TGATCA	1 cut(s)	1006
Fnu4HI	GCNGC	7 cut(s)	323, 580, 876, 1098, 1220, 1265, 1320
FokI	GGATG	5 cut(s)	425, 632, 671, 1160, 1199
FriOI	GRGCYC	1 cut(s)	246
Fsp4HI	GCNGC	7 cut(s)	323, 580, 876, 1098, 1220, 1265, 1320
FspI	TGCGCA	1 cut(s)	1268
GlaI	GCGC	2 cut(s)	326, 1268
GluI	GCNGC	7 cut(s)	323, 580, 876, 1098, 1220, 1265, 1320
GsaI	CCCAGC	2 cut(s)	50, 724
HaeIII	GGCC	3 cut(s)	125, 350, 1090
HapII	CCGG	5 cut(s)	122, 369, 522, 534, 1094
HgaI	GACGC	2 cut(s)	316, 995
HhaI	GCGC	2 cut(s)	327, 1269
Hin1I	GRCGYC	2 cut(s)	231, 545
Hin1II	CATG	8 cut(s)	310, 680, 686, 986, 1013, 1244, 1284, 1358
Hin6I	GCGC	2 cut(s)	325, 1267
HinP1I	GCGC	2 cut(s)	325, 1267
HinfI	GANTC	9 cut(s)	56, 374, 530, 608, 725, 839, 967, 1117, 1138
HpaII	CCGG	5 cut(s)	122, 369, 522, 534, 1094
HphI	GGTGA	8 cut(s)	4, 127, 548, 643, 680, 698, 1016, 1090
Hpy166II	GTNNAC	2 cut(s)	142, 1229
Hpy188III	TCNNGA	9 cut(s)	110, 428, 485, 824, 881, 971, 1010, 1114, 1142
Hpy8I	GTNNAC	2 cut(s)	142, 1229
Hpy99I	CGWCG	8 cut(s)	158, 230, 233, 236, 269, 280, 332, 547
HpyAV	CCTTC	5 cut(s)	29, 61, 504, 1150, 1202
HpyCH4III	ACNGT	1 cut(s)	139
HpyCH4IV	ACGT	2 cut(s)	231, 545
HpyCH4V	TGCA	6 cut(s)	649, 1031, 1166, 1182, 1229, 1251
HpyF10VI	GCNNNNNNNGC	5 cut(s)	331, 646, 875, 1172, 1264
HpyF3I	CTNAG	3 cut(s)	339, 882, 1140
HpySE526I	ACGT	2 cut(s)	231, 545
Hsp92I	GRCGYC	2 cut(s)	231, 545
Hsp92II	CATG	8 cut(s)	310, 680, 686, 986, 1013, 1244, 1284, 1358
HspAI	GCGC	2 cut(s)	325, 1267
KpnI	GGTACC	1 cut(s)	1240
KroI	GCCGGC	1 cut(s)	121
KroNI	GCCGGC	1 cut(s)	123
Ksp22I	TGATCA	1 cut(s)	1006
Kzo9I	GATC	7 cut(s)	106, 310, 424, 481, 602, 820, 1006
LmnI	GCTCC	6 cut(s)	241, 565, 742, 883, 961, 973
Lsp1109I	GCAGC	7 cut(s)	334, 566, 862, 1084, 1206, 1251, 1306
LweI	GCATC	1 cut(s)	1306
MabI	ACCWGGT	1 cut(s)	291
MaeII	ACGT	2 cut(s)	231, 545
MaeIII	GTNAC	5 cut(s)	10, 133, 343, 668, 1135
MalI	GATC	7 cut(s)	108, 312, 426, 483, 604, 822, 1008
MbiI	CCGCTC	1 cut(s)	217
MboI	GATC	7 cut(s)	106, 310, 424, 481, 602, 820, 1006
MfeI	CAATTG	1 cut(s)	955
MflI	RGATCY	3 cut(s)	310, 424, 602
MhlI	GDGCHC	2 cut(s)	246, 1231
MluCI	AATT	8 cut(s)	247, 298, 400, 469, 922, 946, 955, 1102
MlyI	GAGTC	4 cut(s)	368, 617, 1111, 1132
MmeI	TCCRAC	5 cut(s)	102, 258, 282, 402, 507
MroNI	GCCGGC	1 cut(s)	121
MslI	CAYNNNNRTG	1 cut(s)	681
MspI	CCGG	5 cut(s)	122, 369, 522, 534, 1094
MspR9I	CCNGG	3 cut(s)	293, 523, 1002
MunI	CAATTG	1 cut(s)	955
Mva1269I	GAATGC	3 cut(s)	649, 816, 1078
MvaI	CCWGG	2 cut(s)	293, 1002
MvnI	CGCG	3 cut(s)	225, 285, 327
MwoI	GCNNNNNNNGC	5 cut(s)	331, 646, 875, 1172, 1264
NaeI	GCCGGC	1 cut(s)	123
NciI	CCSGG	1 cut(s)	523
NcoI	CCATGG	1 cut(s)	1240
NdeII	GATC	7 cut(s)	106, 310, 424, 481, 602, 820, 1006
NgoMIV	GCCGGC	1 cut(s)	121
NlaIII	CATG	8 cut(s)	310, 680, 686, 986, 1013, 1244, 1284, 1358
NlaIV	GGNNCC	7 cut(s)	221, 243, 567, 604, 711, 963, 1238
NmeAIII	GCCGAG	1 cut(s)	238
NmuCI	GTSAC	4 cut(s)	10, 133, 668, 1135
NsbI	TGCGCA	1 cut(s)	1268
NspI	RCATGY	1 cut(s)	1284
NspV	TTCGAA	1 cut(s)	54
PagI	TCATGA	1 cut(s)	1009
PceI	AGGCCT	1 cut(s)	1090
PciI	ACATGT	1 cut(s)	1280
PcsI	WCGNNNNNNNCGW	3 cut(s)	150, 174, 866
PctI	GAATGC	3 cut(s)	649, 816, 1078
PdiI	GCCGGC	1 cut(s)	123
PfeI	GAWTC	5 cut(s)	56, 530, 725, 839, 967
PflFI	GACNNNGTC	1 cut(s)	230
PkrI	GCNGC	7 cut(s)	324, 581, 877, 1099, 1221, 1266, 1321
PleI	GAGTC	4 cut(s)	368, 616, 1111, 1132
PpsI	GAGTC	4 cut(s)	368, 616, 1111, 1132
PscI	ACATGT	1 cut(s)	1280
Psp6I	CCWGG	2 cut(s)	291, 1000
PspFI	CCCAGC	2 cut(s)	46, 720
PspGI	CCWGG	2 cut(s)	291, 1000
PspN4I	GGNNCC	7 cut(s)	221, 243, 567, 604, 711, 963, 1238
PspPI	GGNCC	5 cut(s)	72, 124, 280, 349, 979
PstI	CTGCAG	1 cut(s)	1033
PstNI	CAGNNNCTG	1 cut(s)	976
PsuI	RGATCY	3 cut(s)	310, 424, 602
PsyI	GACNNNGTC	1 cut(s)	230
RsaI	GTAC	2 cut(s)	194, 1238
RsaNI	GTAC	2 cut(s)	193, 1237
RseI	CAYNNNNRTG	1 cut(s)	681
Rsr2I	CGGWCCG	1 cut(s)	280
RsrII	CGGWCCG	1 cut(s)	280
SatI	GCNGC	7 cut(s)	323, 580, 876, 1098, 1220, 1265, 1320
Sau3AI	GATC	7 cut(s)	106, 310, 424, 481, 602, 820, 1006
Sau96I	GGNCC	5 cut(s)	72, 124, 280, 349, 979
SchI	GAGTC	4 cut(s)	368, 617, 1111, 1132
ScrFI	CCNGG	3 cut(s)	293, 523, 1002
SduI	GDGCHC	2 cut(s)	246, 1231
SexAI	ACCWGGT	1 cut(s)	291
SfaNI	GCATC	1 cut(s)	1306
SfcI	CTRYAG	2 cut(s)	552, 1029
SfuI	TTCGAA	1 cut(s)	54
SinI	GGWCC	3 cut(s)	72, 280, 979
SmiMI	CAYNNNNRTG	1 cut(s)	681
Sse9I	AATT	8 cut(s)	247, 298, 400, 469, 922, 946, 955, 1102
SseBI	AGGCCT	1 cut(s)	1090
SsiI	CCGC	7 cut(s)	5, 119, 217, 223, 283, 952, 1076
StuI	AGGCCT	1 cut(s)	1090
StyD4I	CCNGG	3 cut(s)	291, 521, 1000
StyI	CCWWGG	1 cut(s)	1240
TaaI	ACNGT	1 cut(s)	139
TaiI	ACGT	2 cut(s)	234, 548
TaqI	TCGA	7 cut(s)	54, 87, 330, 429, 733, 1113, 1294
TasI	AATT	8 cut(s)	247, 298, 400, 469, 922, 946, 955, 1102
TfiI	GAWTC	5 cut(s)	56, 530, 725, 839, 967
TscAI	CASTG	1 cut(s)	1033
TseFI	GTSAC	4 cut(s)	10, 133, 668, 1135
TseI	GCWGC	7 cut(s)	322, 579, 875, 1097, 1219, 1264, 1319
Tsp45I	GTSAC	4 cut(s)	10, 133, 668, 1135
TspDTI	ATGAA	2 cut(s)	504, 671
TspGWI	ACGGA	2 cut(s)	346, 1117
TspRI	CASTG	1 cut(s)	1033
Tth111I	GACNNNGTC	1 cut(s)	230
VneI	GTGCAC	1 cut(s)	1227
VpaK11BI	GGWCC	3 cut(s)	72, 280, 979
XapI	RAATTY	2 cut(s)	922, 946
XceI	RCATGY	1 cut(s)	1284
ZraI	GACGTC	2 cut(s)	232, 546

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.