Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0011050

Physical Location & Seq

Genomic Coordinates Forward (+)

4136182 .. 4138286

Gene Structure 2105 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG062400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1383 bp

ATGGCGGAAGTCACCTACCTTCAAATCCACGACCTTGAAGAAAACCCAGCCTTCGAATCCCTCCCCTACTGGTCCTCCAACGACTTCGACCTCTACATCTCCTCCGATCCCGATTTCCCGCCGGCCCAGTTCATCACCGTCCACGAAGAAGACGACGAAGACTTCGACGGCGAAGACGACATCTTTTCCCAGTACCATTCCACAATCCACGCCGAGCGGAACAACCGCGACGACGTCGTTTCGGAGCCCAATTCCATTTCCAACACCGACGACTTGTCGTCGGACCGCGAGAACCAGGTCAGTTTCGTCATGGATCTGTTCCAGCAGCGCGTCGAGCAGTCTCAGGTAACGGCCCGTTCCGTTGTGGTCTCCGGCGACTCCGATTTTGGGGTTGTGGAGGGGAACTGCGATATGGATGATGGGTTGGATCTGGATTTGAGTTTAGGGTTAGGGTTAGGGTTAGATTTTAGGAATTGTTTTGATGATGCTGATGAAGATGACTTCTTTGTGGGAAGGAGGGTTTCCGGGTCGGAATCCGGTGAGGCGACGTCTTCTGTAGGTAGGGTGGAGCCGTTTGAGAGCTGCGTGAGGCTCGTTGGGTTTGGATCCGAGTCTGATGAGGATGATAATGGGGTTATTGGGCTTGATTTGCATTCGGAGGAGGAGTATGGTGAGGACCATGTTCATGGTGATTTCGATGACGAAACGGGGGTTCCTCTGTGCTGGGATTCGCTTCGATTGGAGGAGCAGAGGGAGAGTAATGAGGAGTTTGAGTGGGAAGAAGTTGATGGTAGGGTGGAAGAGGTTTTCGGAATGTTGGTTGATCCTGATAATGAGGAGGAAGCGGGGTCTGTTTCGGTTTCGCTCTCGGCAATGGCTGCTCCTGAGGAGGAAGTGAGTGTGGAGAGAGTTGAAGCTCTGGGGAATTTGGAATGGGAAGTGTTGTTGAATTCCCGCAATTGGGAGCCGAATCAGGAGCTCGACCATGACGCTGAACATTTCCCTGGTGATCACGATGACTACATCTACACTGCCGAATATGATATGTTGTTTGGGCAGTTTTCCGAGAATGAGAATGCGGTGATGGGCAGGCCTCCGGCTGCTAATTCTTTTGTCGAGACTCTTCCTTCAGTGGTTGTGACTCAGGAGGATGTGGAGAAGGGCAATGCACTCTGTGCGGTATGCAAGGATGATATTACTCTCGGGGAACAAGGAAAGAAGCTGCCTTGTGCACATAGGTACCATGGCGATTGCATTGTGCCCTGGCTGCGCATTAGGAATACTTGTCCAGTTTGTCGATATGAGTTACCTACCGATGATGCTGCTTATGAGCGTGGGAGGAGCCAGAGGACAGCTCATGGACTGAACTTTGGGCAGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009987 GO:0010026 GO:0010154 GO:0016043 GO:0016049 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022412 GO:0022414 GO:0030154 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0036211 GO:0040007 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048316 GO:0048468 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0060560 GO:0061458 GO:0070647 GO:0071704 GO:0071840 GO:0090376 GO:0090378 GO:0090558 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

460

Amino Acids

51.6

Weight (kDa)

4.05

Isoelectric Point (pI)

41.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	391 - 433	1.9e-11	Ring finger domain
zf-C3HC4_2	PF13923	392 - 432	3.1e-07	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	392 - 419	3.2e-07	RING-like zinc finger
zf-C3HC4	PF00097	392 - 432	3.7e-06	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	409 - 433	7.1e-06	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08139 AT5G08139
fragaria_vesca	FvH4_5g13270
malus_domestica	MD06G1206700.v1.1
prunus_persica	Prupe.5G211100_v2.0.a1
pyrus_communis	pycom14g18010
rosa_chinensis	RchiOBHm_Chr7g0183901
rosa_laevigata	RLG00000005013 RLG00000033786
rosa_multiflora	Rmu_sc0001926.1_g000006 Rmu_sc0004712.1_g000033 Rmu_sc0007533.1_g000005 Rmu_sc0012562.1_g000017
rosa_roxburghii	Rroxscaffold_3G00270100
rosa_rugosa	Rorug06G0461300
rosa_samantha	Rh7AG062200 Rh7BG062400 Rh7CG063800 Rh7DG062200
rosa_wichuraiana	Rw7G005140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	237, 551
Acc16I	TGCGCA	1 cut(s)	1271
Acc65I	GGTACC	1 cut(s)	1239
AccB1I	GGYRCC	1 cut(s)	1239
AccBSI	CCGCTC	1 cut(s)	217
AccII	CGCG	3 cut(s)	228, 288, 330
AciI	CCGC	9 cut(s)	5, 119, 217, 226, 286, 845, 955, 1079, 1178
AclWI	GGATC	6 cut(s)	101, 321, 435, 600, 613, 818
AcsI	RAATTY	2 cut(s)	925, 949
AcuI	CTGAAG	1 cut(s)	1113
AcyI	GRCGYC	2 cut(s)	234, 548
AdeI	CACNNNGTG	1 cut(s)	1175
AfaI	GTAC	2 cut(s)	194, 1241
AfiI	CCNNNNNNNGG	3 cut(s)	387, 960, 961
AgsI	TTSAA	4 cut(s)	23, 38, 914, 949
AhdI	GACNNNNNGTC	2 cut(s)	274, 277
AjnI	CCWGG	3 cut(s)	294, 1003, 1262
AluBI	AGCT	5 cut(s)	582, 917, 979, 1222, 1355
AluI	AGCT	5 cut(s)	582, 917, 979, 1222, 1355
Alw21I	GWGCWC	2 cut(s)	981, 1234
Alw26I	GTCTC	3 cut(s)	345, 373, 1112
Alw44I	GTGCAC	1 cut(s)	1230
AlwI	GGATC	6 cut(s)	101, 321, 435, 600, 613, 818
Ama87I	CYCGRG	1 cut(s)	1202
AoxI	GGCC	3 cut(s)	123, 351, 1091
ApaLI	GTGCAC	1 cut(s)	1230
ApeKI	GCWGC	7 cut(s)	325, 582, 878, 1100, 1222, 1267, 1322
ApoI	RAATTY	2 cut(s)	925, 949
ArsI	GACNNNNNNTTYG	4 cut(s)	146, 178, 368, 400
Asp718I	GGTACC	1 cut(s)	1239
AspLEI	GCGC	2 cut(s)	330, 1272
AspS9I	GGNCC	5 cut(s)	72, 124, 283, 352, 676
AsuC2I	CCSGG	1 cut(s)	526
AsuHPI	GGTGA	7 cut(s)	4, 127, 551, 683, 701, 1019, 1093
AsuII	TTCGAA	1 cut(s)	54
AvaI	CYCGRG	1 cut(s)	1202
AvaII	GGWCC	3 cut(s)	72, 283, 676
AxyI	CCTNAGG	1 cut(s)	885
BaeGI	GKGCMC	2 cut(s)	1234, 1263
BaeI	ACNNNNGTAYC	2 cut(s)	1223, 1256
BamHI	GGATCC	1 cut(s)	605
BanI	GGYRCC	1 cut(s)	1239
BanII	GRGCYC	2 cut(s)	249, 981
BbsI	GAAGAC	4 cut(s)	156, 165, 180, 543
Bbv12I	GWGCWC	2 cut(s)	981, 1234
BbvI	GCAGC	7 cut(s)	337, 569, 865, 1087, 1209, 1254, 1309
BccI	CCATC	3 cut(s)	413, 782, 1078
BceAI	ACGGC	3 cut(s)	184, 366, 556
BcgI	CGANNNNNNTGC	2 cut(s)	1304, 1338
BciT130I	CCWGG	3 cut(s)	296, 1005, 1264
BclI	TGATCA	1 cut(s)	1009
BcnI	CCSGG	1 cut(s)	526
BcoDI	GTCTC	3 cut(s)	345, 373, 1112
BfmI	CTRYAG	1 cut(s)	555
BisI	GCNGC	7 cut(s)	326, 583, 879, 1101, 1223, 1268, 1323
BlsI	GCNGC	7 cut(s)	327, 584, 880, 1102, 1224, 1269, 1324
Bme1390I	CCNGG	4 cut(s)	296, 526, 1005, 1264
Bme18I	GGWCC	3 cut(s)	72, 283, 676
BmeRI	GACNNNNNGTC	2 cut(s)	274, 277
BmeT110I	CYCGRG	1 cut(s)	1202
BmgT120I	GGNCC	5 cut(s)	72, 124, 283, 352, 676
BmiI	GGNNCC	7 cut(s)	246, 570, 607, 714, 966, 1241, 1343
BmrFI	CCNGG	4 cut(s)	296, 526, 1005, 1264
BmrI	ACTGGG	2 cut(s)	121, 184
BmsI	GCATC	2 cut(s)	475, 1309
BmuI	ACTGGG	2 cut(s)	121, 184
BpiI	GAAGAC	4 cut(s)	156, 165, 180, 543
BplI	GAGNNNNNCTC	2 cut(s)	1339, 1371
Bpu14I	TTCGAA	1 cut(s)	54
BpuMI	CCSGG	1 cut(s)	526
BsaHI	GRCGYC	2 cut(s)	234, 548
BsaI	GGTCTC	1 cut(s)	373
BsaJI	CCNNGG	3 cut(s)	1003, 1243, 1262
BsaWI	WCCGGW	1 cut(s)	536
BsaXI	ACNNNNNCTCC	8 cut(s)	59, 86, 89, 116, 650, 680, 758, 788
Bsc4I	CCNNNNNNNGG	3 cut(s)	387, 960, 961
Bse118I	RCCGGY	1 cut(s)	121
Bse1I	ACTGG	4 cut(s)	74, 127, 190, 1289
Bse21I	CCTNAGG	1 cut(s)	885
Bse3DI	GCAATG	2 cut(s)	879, 1171
BseBI	CCWGG	3 cut(s)	296, 1005, 1264
BseDI	CCNNGG	3 cut(s)	1003, 1243, 1262
BseGI	GGATG	4 cut(s)	421, 628, 1156, 1195
BseLI	CCNNNNNNNGG	3 cut(s)	387, 960, 961
BseMI	GCAATG	2 cut(s)	879, 1171
BseMII	CTCAG	3 cut(s)	356, 876, 1157
BseNI	ACTGG	4 cut(s)	74, 127, 190, 1289
BseRI	GAGGAG	8 cut(s)	91, 674, 677, 758, 779, 851, 902, 1354
BseSI	GKGCMC	2 cut(s)	1234, 1263
BseXI	GCAGC	7 cut(s)	337, 569, 865, 1087, 1209, 1254, 1309
BseYI	CCCAGC	2 cut(s)	46, 723
Bsh1236I	CGCG	3 cut(s)	228, 288, 330
BshFI	GGCC	3 cut(s)	125, 353, 1093
BshNI	GGYRCC	1 cut(s)	1239
BsiHKAI	GWGCWC	2 cut(s)	981, 1234
BsiHKCI	CYCGRG	1 cut(s)	1202
BsiSI	CCGG	5 cut(s)	122, 372, 525, 537, 1097
BslI	CCNNNNNNNGG	3 cut(s)	387, 960, 961
BsmAI	GTCTC	3 cut(s)	345, 373, 1112
BsmI	GAATGC	2 cut(s)	652, 1081
BsnI	GGCC	3 cut(s)	125, 353, 1093
Bso31I	GGTCTC	1 cut(s)	373
BsoBI	CYCGRG	1 cut(s)	1202
Bsp119I	TTCGAA	1 cut(s)	54
Bsp1286I	GDGCHC	4 cut(s)	249, 981, 1234, 1263
Bsp143I	GATC	6 cut(s)	106, 313, 427, 605, 823, 1009
Bsp19I	CCATGG	1 cut(s)	1243
BspACI	CCGC	9 cut(s)	5, 119, 217, 226, 286, 845, 955, 1079, 1178
BspANI	GGCC	3 cut(s)	125, 353, 1093
BspCNI	CTCAG	3 cut(s)	355, 877, 1156
BspFNI	CGCG	3 cut(s)	228, 288, 330
BspLI	GGNNCC	7 cut(s)	246, 570, 607, 714, 966, 1241, 1343
BspPI	GGATC	6 cut(s)	101, 321, 435, 600, 613, 818
BspT104I	TTCGAA	1 cut(s)	54
BspT107I	GGYRCC	1 cut(s)	1239
BspTNI	GGTCTC	1 cut(s)	373
BsrBI	CCGCTC	1 cut(s)	217
BsrDI	GCAATG	2 cut(s)	879, 1171
BsrFI	RCCGGY	1 cut(s)	121
BsrI	ACTGG	4 cut(s)	74, 127, 190, 1289
BssAI	RCCGGY	1 cut(s)	121
BssECI	CCNNGG	3 cut(s)	1003, 1243, 1262
BssMI	GATC	6 cut(s)	106, 313, 427, 605, 823, 1009
BssNI	GRCGYC	2 cut(s)	234, 548
BssT1I	CCWWGG	1 cut(s)	1243
Bst2UI	CCWGG	3 cut(s)	296, 1005, 1264
Bst4CI	ACNGT	1 cut(s)	139
Bst6I	CTCTTC	2 cut(s)	795, 1128
BstACI	GRCGYC	2 cut(s)	234, 548
BstAPI	GCANNNNNTGC	2 cut(s)	878, 1175
BstBI	TTCGAA	1 cut(s)	54
BstC8I	GCNNGC	2 cut(s)	123, 1091
BstDEI	CTNAG	3 cut(s)	342, 885, 1143
BstDSI	CCRYGG	1 cut(s)	1243
BstF5I	GGATG	4 cut(s)	421, 628, 1156, 1195
BstFNI	CGCG	3 cut(s)	228, 288, 330
BstHHI	GCGC	2 cut(s)	330, 1272
BstKTI	GATC	6 cut(s)	109, 316, 430, 608, 826, 1012
BstMAI	GTCTC	3 cut(s)	345, 373, 1112
BstMBI	GATC	6 cut(s)	106, 313, 427, 605, 823, 1009
BstMWI	GCNNNNNNNGC	5 cut(s)	334, 649, 878, 1175, 1267
BstNI	CCWGG	3 cut(s)	296, 1005, 1264
BstSCI	CCNGG	4 cut(s)	294, 524, 1003, 1262
BstSFI	CTRYAG	1 cut(s)	555
BstSLI	GKGCMC	2 cut(s)	1234, 1263
BstUI	CGCG	3 cut(s)	228, 288, 330
BstV1I	GCAGC	7 cut(s)	337, 569, 865, 1087, 1209, 1254, 1309
BstV2I	GAAGAC	4 cut(s)	156, 165, 180, 543
BstX2I	RGATCY	3 cut(s)	313, 427, 605
BstXI	CCANNNNNNTGG	1 cut(s)	686
BstYI	RGATCY	3 cut(s)	313, 427, 605
Bsu36I	CCTNAGG	1 cut(s)	885
BsuRI	GGCC	3 cut(s)	125, 353, 1093
BtgI	CCRYGG	1 cut(s)	1243
BtsCI	GGATG	4 cut(s)	421, 628, 1156, 1195
BtsI	GCAGTG	1 cut(s)	1029
BtsIMutI	CAGTG	2 cut(s)	1029, 1137
Cac8I	GCNNGC	2 cut(s)	123, 1091
CfoI	GCGC	2 cut(s)	330, 1272
Cfr10I	RCCGGY	1 cut(s)	121
Cfr13I	GGNCC	5 cut(s)	72, 124, 283, 352, 676
CpoI	CGGWCCG	1 cut(s)	283
CseI	GACGC	2 cut(s)	319, 998
CsiI	ACCWGGT	1 cut(s)	294
Csp6I	GTAC	2 cut(s)	193, 1240
CspI	CGGWCCG	1 cut(s)	283
CviAII	CATG	6 cut(s)	310, 680, 686, 986, 1244, 1358
CviQI	GTAC	2 cut(s)	193, 1240
DdeI	CTNAG	3 cut(s)	342, 885, 1143
DpnI	GATC	6 cut(s)	108, 315, 429, 607, 825, 1011
DpnII	GATC	6 cut(s)	106, 313, 427, 605, 823, 1009
DraIII	CACNNNGTG	1 cut(s)	1175
DriI	GACNNNNNGTC	2 cut(s)	274, 277
Eam1104I	CTCTTC	2 cut(s)	795, 1128
Eam1105I	GACNNNNNGTC	2 cut(s)	274, 277
EarI	CTCTTC	2 cut(s)	795, 1128
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	1 cut(s)	979
Eco130I	CCWWGG	1 cut(s)	1243
Eco147I	AGGCCT	1 cut(s)	1093
Eco24I	GRGCYC	2 cut(s)	249, 981
Eco31I	GGTCTC	1 cut(s)	373
Eco47I	GGWCC	3 cut(s)	72, 283, 676
Eco53kI	GAGCTC	1 cut(s)	979
Eco57I	CTGAAG	1 cut(s)	1113
Eco81I	CCTNAGG	1 cut(s)	885
Eco88I	CYCGRG	1 cut(s)	1202
EcoICRI	GAGCTC	1 cut(s)	979
EcoRI	GAATTC	1 cut(s)	949
EcoRII	CCWGG	3 cut(s)	294, 1003, 1262
EcoT14I	CCWWGG	1 cut(s)	1243
EcoT38I	GRGCYC	2 cut(s)	249, 981
ErhI	CCWWGG	1 cut(s)	1243
FaeI	CATG	6 cut(s)	313, 683, 689, 989, 1247, 1361
FatI	CATG	6 cut(s)	309, 679, 685, 985, 1243, 1357
FauI	CCCGC	3 cut(s)	126, 838, 962
FbaI	TGATCA	1 cut(s)	1009
Fnu4HI	GCNGC	7 cut(s)	326, 583, 879, 1101, 1223, 1268, 1323
FokI	GGATG	4 cut(s)	428, 635, 1163, 1202
FriOI	GRGCYC	2 cut(s)	249, 981
Fsp4HI	GCNGC	7 cut(s)	326, 583, 879, 1101, 1223, 1268, 1323
FspI	TGCGCA	1 cut(s)	1271
GlaI	GCGC	2 cut(s)	329, 1271
GluI	GCNGC	7 cut(s)	326, 583, 879, 1101, 1223, 1268, 1323
GsaI	CCCAGC	2 cut(s)	50, 727
HaeIII	GGCC	3 cut(s)	125, 353, 1093
HapII	CCGG	5 cut(s)	122, 372, 525, 537, 1097
HgaI	GACGC	2 cut(s)	319, 998
HhaI	GCGC	2 cut(s)	330, 1272
Hin1I	GRCGYC	2 cut(s)	234, 548
Hin1II	CATG	6 cut(s)	313, 683, 689, 989, 1247, 1361
Hin6I	GCGC	2 cut(s)	328, 1270
HinP1I	GCGC	2 cut(s)	328, 1270
HinfI	GANTC	8 cut(s)	56, 377, 533, 611, 728, 970, 1120, 1141
HpaII	CCGG	5 cut(s)	122, 372, 525, 537, 1097
HphI	GGTGA	7 cut(s)	4, 127, 551, 683, 701, 1019, 1093
Hpy166II	GTNNAC	2 cut(s)	142, 1232
Hpy188III	TCNNGA	8 cut(s)	110, 431, 827, 884, 974, 1013, 1117, 1145
Hpy8I	GTNNAC	2 cut(s)	142, 1232
Hpy99I	CGWCG	9 cut(s)	158, 170, 233, 236, 239, 272, 283, 335, 550
HpyAV	CCTTC	5 cut(s)	29, 61, 507, 1137, 1153
HpyCH4III	ACNGT	1 cut(s)	139
HpyCH4IV	ACGT	2 cut(s)	234, 548
HpyCH4V	TGCA	5 cut(s)	652, 1169, 1185, 1232, 1254
HpyF10VI	GCNNNNNNNGC	5 cut(s)	334, 649, 878, 1175, 1267
HpyF3I	CTNAG	3 cut(s)	342, 885, 1143
HpySE526I	ACGT	2 cut(s)	234, 548
Hsp92I	GRCGYC	2 cut(s)	234, 548
Hsp92II	CATG	6 cut(s)	313, 683, 689, 989, 1247, 1361
HspAI	GCGC	2 cut(s)	328, 1270
KpnI	GGTACC	1 cut(s)	1243
KroI	GCCGGC	1 cut(s)	121
KroNI	GCCGGC	1 cut(s)	123
Ksp22I	TGATCA	1 cut(s)	1009
Kzo9I	GATC	6 cut(s)	106, 313, 427, 605, 823, 1009
LmnI	GCTCC	7 cut(s)	244, 568, 745, 886, 964, 976, 1341
Lsp1109I	GCAGC	7 cut(s)	337, 569, 865, 1087, 1209, 1254, 1309
LweI	GCATC	2 cut(s)	475, 1309
MabI	ACCWGGT	1 cut(s)	294
MaeII	ACGT	2 cut(s)	234, 548
MaeIII	GTNAC	4 cut(s)	10, 346, 1138, 1305
MalI	GATC	6 cut(s)	108, 315, 429, 607, 825, 1011
MbiI	CCGCTC	1 cut(s)	217
MboI	GATC	6 cut(s)	106, 313, 427, 605, 823, 1009
MfeI	CAATTG	1 cut(s)	958
MflI	RGATCY	3 cut(s)	313, 427, 605
MhlI	GDGCHC	4 cut(s)	249, 981, 1234, 1263
MluCI	AATT	6 cut(s)	250, 472, 925, 949, 958, 1105
MlyI	GAGTC	4 cut(s)	371, 620, 1114, 1135
MmeI	TCCRAC	5 cut(s)	102, 261, 285, 405, 510
MroNI	GCCGGC	1 cut(s)	121
MslI	CAYNNNNRTG	1 cut(s)	684
MspI	CCGG	5 cut(s)	122, 372, 525, 537, 1097
MspR9I	CCNGG	4 cut(s)	296, 526, 1005, 1264
MunI	CAATTG	1 cut(s)	958
Mva1269I	GAATGC	2 cut(s)	652, 1081
MvaI	CCWGG	3 cut(s)	296, 1005, 1264
MvnI	CGCG	3 cut(s)	228, 288, 330
MwoI	GCNNNNNNNGC	5 cut(s)	334, 649, 878, 1175, 1267
NaeI	GCCGGC	1 cut(s)	123
NciI	CCSGG	1 cut(s)	526
NcoI	CCATGG	1 cut(s)	1243
NdeII	GATC	6 cut(s)	106, 313, 427, 605, 823, 1009
NgoMIV	GCCGGC	1 cut(s)	121
NlaIII	CATG	6 cut(s)	313, 683, 689, 989, 1247, 1361
NlaIV	GGNNCC	7 cut(s)	246, 570, 607, 714, 966, 1241, 1343
NmeAIII	GCCGAG	2 cut(s)	238, 848
NmuCI	GTSAC	2 cut(s)	10, 1138
NsbI	TGCGCA	1 cut(s)	1271
NspV	TTCGAA	1 cut(s)	54
PceI	AGGCCT	1 cut(s)	1093
PcsI	WCGNNNNNNNCGW	3 cut(s)	150, 162, 174
PctI	GAATGC	2 cut(s)	652, 1081
PdiI	GCCGGC	1 cut(s)	123
PfeI	GAWTC	4 cut(s)	56, 533, 728, 970
PflFI	GACNNNGTC	1 cut(s)	233
PkrI	GCNGC	7 cut(s)	327, 584, 880, 1102, 1224, 1269, 1324
PleI	GAGTC	4 cut(s)	371, 619, 1114, 1135
PpsI	GAGTC	4 cut(s)	371, 619, 1114, 1135
Psp124BI	GAGCTC	1 cut(s)	981
Psp6I	CCWGG	3 cut(s)	294, 1003, 1262
PspFI	CCCAGC	2 cut(s)	46, 723
PspGI	CCWGG	3 cut(s)	294, 1003, 1262
PspN4I	GGNNCC	7 cut(s)	246, 570, 607, 714, 966, 1241, 1343
PspPI	GGNCC	5 cut(s)	72, 124, 283, 352, 676
PsuI	RGATCY	3 cut(s)	313, 427, 605
PsyI	GACNNNGTC	1 cut(s)	233
RsaI	GTAC	2 cut(s)	194, 1241
RsaNI	GTAC	2 cut(s)	193, 1240
RseI	CAYNNNNRTG	1 cut(s)	684
Rsr2I	CGGWCCG	1 cut(s)	283
RsrII	CGGWCCG	1 cut(s)	283
SacI	GAGCTC	1 cut(s)	981
SatI	GCNGC	7 cut(s)	326, 583, 879, 1101, 1223, 1268, 1323
Sau3AI	GATC	6 cut(s)	106, 313, 427, 605, 823, 1009
Sau96I	GGNCC	5 cut(s)	72, 124, 283, 352, 676
SchI	GAGTC	4 cut(s)	371, 620, 1114, 1135
ScrFI	CCNGG	4 cut(s)	296, 526, 1005, 1264
SduI	GDGCHC	4 cut(s)	249, 981, 1234, 1263
SexAI	ACCWGGT	1 cut(s)	294
SfaNI	GCATC	2 cut(s)	475, 1309
SfcI	CTRYAG	1 cut(s)	555
SfuI	TTCGAA	1 cut(s)	54
SinI	GGWCC	3 cut(s)	72, 283, 676
SmiMI	CAYNNNNRTG	1 cut(s)	684
Sse9I	AATT	6 cut(s)	250, 472, 925, 949, 958, 1105
SseBI	AGGCCT	1 cut(s)	1093
SsiI	CCGC	9 cut(s)	5, 119, 217, 226, 286, 845, 955, 1079, 1178
SstI	GAGCTC	1 cut(s)	981
StuI	AGGCCT	1 cut(s)	1093
StyD4I	CCNGG	4 cut(s)	294, 524, 1003, 1262
StyI	CCWWGG	1 cut(s)	1243
TaaI	ACNGT	1 cut(s)	139
TaiI	ACGT	2 cut(s)	237, 551
TaqI	TCGA	9 cut(s)	54, 87, 165, 333, 696, 736, 981, 1116, 1297
TasI	AATT	6 cut(s)	250, 472, 925, 949, 958, 1105
TfiI	GAWTC	4 cut(s)	56, 533, 728, 970
TscAI	CASTG	2 cut(s)	1036, 1137
TseFI	GTSAC	2 cut(s)	10, 1138
TseI	GCWGC	7 cut(s)	325, 582, 878, 1100, 1222, 1267, 1322
Tsp45I	GTSAC	2 cut(s)	10, 1138
TspDTI	ATGAA	3 cut(s)	121, 507, 674
TspGWI	ACGGA	1 cut(s)	349
TspRI	CASTG	2 cut(s)	1036, 1137
Tth111I	GACNNNGTC	1 cut(s)	233
VneI	GTGCAC	1 cut(s)	1230
VpaK11BI	GGWCC	3 cut(s)	72, 283, 676
XapI	RAATTY	2 cut(s)	925, 949
ZraI	GACGTC	2 cut(s)	235, 549

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.