Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0015795

Physical Location & Seq

Genomic Coordinates Reverse (-)

3038231 .. 3041140

Gene Structure 2910 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005953

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

ATGAGTCGCAGCCGGTACTTCACCAGAAGAGAGCTGGAGCTCAACTCCCCATCTCGCCGGGACGGCATCACCGTCGGCAAAGAGTCAAAACTCCGATCCCAGTACTGCTCCCATATTCAACAGATCGGTCAGAAATTGAGACTGCCTCGCCTGACCATAGCCACCGCAATAATGCTGTGCCACCGCTTCTACGCGCGTCAGTCTCACGCCAAGAACTGCTGGCACACAGTGGCCTCTTCATGTATCCTTCTAGCTAGCAAAGTCCAAGACACGCCTCGATCCCTCAGCGACGTCGTTTCCGCCATTTATTGCCGCGAGATCCAGGACCGGATCACGAGCCTGATGATGAAGTACAAGATCAATCCTCACGACATGAGAGAAAGAGACGAGTTTTGCCAAAAGAGAGTCAATATTTTGAGGAGGGAGAAGAAAGAACTGATCCTAGCGGCGGAGATGATAGTGCTAAAGACGATCGGGTTCGACCTTGATGTTGAGCTTCCCTACAAGGCTCTCGTTGCAGCGCTGAAGAGGTTGACTACTGATGATAAAATCACCGGCCTGCTTACTGAGGTGGCGTGGAGTCTTGTGGAGGAGTGGCTCAAGACATCACTATGCTTGCAGTACAAGCCAAAGTACATTGCGGTTGGGTCAGTCGTGGTGGCTGCTAGGGTTCTGAATGTGAAGTTACCCGCGGGTGAGAAGTGGCTCGAGGAGCTCAGGGTTTTGCCGGAGCGGTTGGATGAGGTCATTCGCTGGATGCAGAGTAAGCTCTGCAAAGTGAAAACTAGGGAGGTCATAAGTTTTAAGAAATCCACTCCCTCTAGCGCCGGCGCCGGCGCTGCTCAGCCAGCGGTGATGCCGTCACCGTCATTCAACACGCGGGCGCAGATCGCCGAGCTGGAGCAGGTCTTCAAGAAATTCGACGTCAACGGCGACGGCAAGATCTCGTCGTCGGAGCTCGGCTCGATCATGGGCAGCCTGGGCCACTCGGCGACGGAGGACGAGCTCCGGTCCATGATCCTCGAGGTCGACGCCGACGGCGATGGCTTCATCGACTTCAAGGAGTTCGTGGAGCTCAACACCAACGGGATCGACTCCGCCGAGGCGTTGCAGAATCTCAAGGACGCCTTCTCCGTCTACGACATCGACGGCAACGGCTCGATCTCCGCGGAGGAGCTCTTCGAGGTGCTGAGGAGCTTGGGCGACGAGTGCTCGATCGGCGAGTGCCGGAAAATGATCAGCGGCGTCGATGCCGACGGCGACGGTATGATCAATTTTGAGGAGTTTAAAGAGATGATGATGATGGGGTCGCGTTATGAGAATAATGCTCAACCTCAACCTGTTGGTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000079 GO:0000307 GO:0001932 GO:0001934 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010562 GO:0010604 GO:0010628 GO:0016538 GO:0019207 GO:0019219 GO:0019220 GO:0019222 GO:0019887 GO:0030234 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0032991 GO:0033674 GO:0042325 GO:0042327 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043549 GO:0044093 GO:0044424 GO:0044464 GO:0045737 GO:0045787 GO:0045859 GO:0045860 GO:0045893 GO:0045935 GO:0045937 GO:0045944 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051338 GO:0051347 GO:0051726 GO:0060255 GO:0061695 GO:0065007 GO:0065009 GO:0071900 GO:0071902 GO:0080090 GO:0098772 GO:1901407 GO:1901409 GO:1902494 GO:1902554 GO:1902680 GO:1902911 GO:1903506 GO:1903508 GO:1904029 GO:1904031 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko05202 map05202

Pfam Domains

Protein Families

Cyclin_C Cyclin_N

Protein Analysis

451

Amino Acids

50.59

Weight (kDa)

6.39

Isoelectric Point (pI)

48.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cyclin_N	PF00134	10 - 162	1.1e-13	Cyclin, N-terminal domain
EF-hand_1	PF00036	299 - 326	2.3e-07	EF hand domain
EF-hand_7	PF13499	299 - 359	1.3e-13	EF-hand domain pair
EF-hand_6	PF13405	299 - 328	4.8e-07	EF-hand domain
EF-hand_5	PF13202	300 - 324	1.9e-07	EF hand
EF-hand_8	PF13833	312 - 359	4.3e-06	EF-hand domain pair
EF-hand_1	PF00036	335 - 359	2e-06	EF hand domain
EF-hand_7	PF13499	372 - 434	5.5e-14	EF-hand domain pair
EF-hand_1	PF00036	373 - 400	2.7e-06	EF hand domain
EF-hand_6	PF13405	373 - 401	2.7e-07	EF-hand domain
EF-hand_8	PF13833	385 - 433	1.3e-07	EF-hand domain pair
EF-hand_1	PF00036	408 - 435	2.1e-07	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015795)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66400
fragaria_vesca	FvH4_4g33640 FvH4_4g33721 FvH4_6g16340
rosa_chinensis	RchiOBHm_Chr4g0443101
rosa_laevigata	RLG00000005953
rosa_multiflora	Rmu_sc0007968.1_g000015 Rmu_sc0008069.1_g000002
rosa_roxburghii	Rroxscaffold_5G00383730
rosa_rugosa	Rorug04G0344400
rosa_samantha	Rh3AG156900 Rh4BG410300 Rh4CG425900 Rh4DG405300
rosa_wichuraiana	Rw4G034370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	294, 927
AbsI	CCTCGAGG	1 cut(s)	1022
Acc36I	ACCTGC	1 cut(s)	895
AccB1I	GGYRCC	1 cut(s)	830
AccBSI	CCGCTC	1 cut(s)	733
AccI	GTMKAC	2 cut(s)	1029, 1137
AccII	CGCG	7 cut(s)	194, 196, 315, 692, 880, 1169, 1312
AclWI	GGATC	7 cut(s)	90, 273, 313, 338, 433, 1012, 1097
AcsI	RAATTY	1 cut(s)	917
AcuI	CTGAAG	1 cut(s)	545
AcyI	GRCGYC	6 cut(s)	291, 831, 924, 1032, 1125, 1245
AdeI	CACNNNGTG	1 cut(s)	229
AfaI	GTAC	5 cut(s)	17, 104, 353, 623, 635
AfeI	AGCGCT	1 cut(s)	522
AfiI	CCNNNNNNNGG	1 cut(s)	448
AgsI	TTSAA	4 cut(s)	119, 874, 913, 1060
AjnI	CCWGG	2 cut(s)	321, 978
Alw21I	GWGCWC	7 cut(s)	42, 717, 960, 1008, 1077, 1179, 1214
Alw26I	GTCTC	3 cut(s)	133, 207, 378
AlwI	GGATC	7 cut(s)	90, 273, 313, 338, 433, 1012, 1097
Ama87I	CYCGRG	2 cut(s)	707, 1022
Aor51HI	AGCGCT	1 cut(s)	522
AoxI	GGCC	3 cut(s)	231, 556, 982
ApeKI	GCWGC	5 cut(s)	9, 518, 662, 839, 975
ApoI	RAATTY	1 cut(s)	917
AspLEI	GCGC	6 cut(s)	196, 523, 827, 833, 839, 886
AspS9I	GGNCC	3 cut(s)	325, 982, 1011
AsuC2I	CCSGG	1 cut(s)	59
AsuHPI	GGTGA	6 cut(s)	13, 61, 544, 707, 855, 865
AsuNHI	GCTAGC	1 cut(s)	254
AvaI	CYCGRG	2 cut(s)	707, 1022
AvaII	GGWCC	2 cut(s)	325, 1011
BanI	GGYRCC	1 cut(s)	830
BanII	GRGCYC	6 cut(s)	42, 717, 960, 1008, 1077, 1179
BauI	CACGAG	1 cut(s)	334
BbsI	GAAGAC	1 cut(s)	901
Bbv12I	GWGCWC	7 cut(s)	42, 717, 960, 1008, 1077, 1179, 1214
BbvCI	CCTCAGC	2 cut(s)	284, 1190
BbvI	GCAGC	5 cut(s)	21, 530, 649, 826, 987
BccI	CCATC	3 cut(s)	58, 1037, 1297
BceAI	ACGGC	8 cut(s)	79, 844, 946, 952, 1054, 1165, 1171, 1273
BcgI	CGANNNNNNTGC	2 cut(s)	55, 89
BciT130I	CCWGG	2 cut(s)	323, 980
BciVI	GTATCC	1 cut(s)	254
BclI	TGATCA	2 cut(s)	1236, 1269
BcnI	CCSGG	1 cut(s)	59
BcoDI	GTCTC	3 cut(s)	133, 207, 378
BfaI	CTAG	6 cut(s)	251, 255, 443, 666, 786, 822
BfoI	RGCGCY	4 cut(s)	524, 828, 834, 840
BfuAI	ACCTGC	1 cut(s)	895
BfuI	GTATCC	1 cut(s)	254
BglI	GCCNNNNNGGC	1 cut(s)	63
BglII	AGATCT	1 cut(s)	942
BisI	GCNGC	8 cut(s)	10, 313, 447, 519, 663, 840, 976, 1243
BlpI	GCTNAGC	1 cut(s)	843
BlsI	GCNGC	8 cut(s)	11, 314, 448, 520, 664, 841, 977, 1244
BmcAI	AGTACT	1 cut(s)	104
Bme1390I	CCNGG	3 cut(s)	59, 323, 980
Bme18I	GGWCC	2 cut(s)	325, 1011
BmeT110I	CYCGRG	2 cut(s)	707, 1022
BmgT120I	GGNCC	3 cut(s)	325, 982, 1011
BmiI	GGNNCC	1 cut(s)	832
BmrFI	CCNGG	3 cut(s)	59, 323, 980
BmrI	ACTGGG	1 cut(s)	94
BmsI	GCATC	4 cut(s)	75, 747, 846, 1240
BmtI	GCTAGC	1 cut(s)	258
BmuI	ACTGGG	1 cut(s)	94
BpiI	GAAGAC	1 cut(s)	901
BplI	GAGNNNNNCTC	6 cut(s)	29, 61, 130, 162, 947, 979
BpmI	CTGGAG	2 cut(s)	56, 920
Bpu10I	CCTNAGC	3 cut(s)	284, 716, 1190
Bpu1102I	GCTNAGC	1 cut(s)	843
BpuEI	CTTGAG	2 cut(s)	584, 1103
BpuMI	CCSGG	1 cut(s)	59
BsaHI	GRCGYC	6 cut(s)	291, 831, 924, 1032, 1125, 1245
BsaJI	CCNNGG	4 cut(s)	690, 979, 1101, 1167
BsaWI	WCCGGW	2 cut(s)	327, 1008
BsaXI	ACNNNNNCTCC	2 cut(s)	1115, 1145
Bsc4I	CCNNNNNNNGG	1 cut(s)	448
Bse118I	RCCGGY	4 cut(s)	12, 554, 827, 833
Bse1I	ACTGG	1 cut(s)	100
Bse3DI	GCAATG	1 cut(s)	636
BseBI	CCWGG	2 cut(s)	323, 980
BseDI	CCNNGG	4 cut(s)	690, 979, 1101, 1167
BseGI	GGATG	2 cut(s)	745, 762
BseLI	CCNNNNNNNGG	1 cut(s)	448
BseMI	GCAATG	1 cut(s)	636
BseMII	CTCAG	5 cut(s)	298, 558, 730, 857, 1181
BseNI	ACTGG	1 cut(s)	100
BseRI	GAGGAG	6 cut(s)	433, 605, 725, 1187, 1207, 1295
BseXI	GCAGC	5 cut(s)	21, 530, 649, 826, 987
Bsh1236I	CGCG	7 cut(s)	194, 196, 315, 692, 880, 1169, 1312
Bsh1285I	CGRYCG	2 cut(s)	474, 1218
BshFI	GGCC	3 cut(s)	233, 558, 984
BshNI	GGYRCC	1 cut(s)	830
BsiEI	CGRYCG	2 cut(s)	474, 1218
BsiHKAI	GWGCWC	7 cut(s)	42, 717, 960, 1008, 1077, 1179, 1214
BsiHKCI	CYCGRG	2 cut(s)	707, 1022
BsiSI	CCGG	9 cut(s)	13, 58, 328, 555, 728, 828, 834, 1009, 1228
BslFI	GGGAC	1 cut(s)	74
BslI	CCNNNNNNNGG	1 cut(s)	448
BsmAI	GTCTC	3 cut(s)	133, 207, 378
BsmBI	CGTCTC	1 cut(s)	378
BsmFI	GGGAC	1 cut(s)	74
BsnI	GGCC	3 cut(s)	233, 558, 984
BsoBI	CYCGRG	2 cut(s)	707, 1022
Bsp1286I	GDGCHC	7 cut(s)	42, 717, 960, 1008, 1077, 1179, 1214
Bsp1720I	GCTNAGC	1 cut(s)	843
BspANI	GGCC	3 cut(s)	233, 558, 984
BspCNI	CTCAG	5 cut(s)	297, 559, 729, 856, 1182
BspFNI	CGCG	7 cut(s)	194, 196, 315, 692, 880, 1169, 1312
BspLI	GGNNCC	1 cut(s)	832
BspMI	ACCTGC	1 cut(s)	895
BspOI	GCTAGC	1 cut(s)	258
BspPI	GGATC	7 cut(s)	90, 273, 313, 338, 433, 1012, 1097
BspQI	GCTCTTC	1 cut(s)	1184
BspT107I	GGYRCC	1 cut(s)	830
BsrBI	CCGCTC	1 cut(s)	733
BsrDI	GCAATG	1 cut(s)	636
BsrFI	RCCGGY	4 cut(s)	12, 554, 827, 833
BsrI	ACTGG	1 cut(s)	100
BssAI	RCCGGY	4 cut(s)	12, 554, 827, 833
BssECI	CCNNGG	4 cut(s)	690, 979, 1101, 1167
BssNI	GRCGYC	6 cut(s)	291, 831, 924, 1032, 1125, 1245
BssSI	CACGAG	1 cut(s)	334
Bst2BI	CACGAG	1 cut(s)	334
Bst2UI	CCWGG	2 cut(s)	323, 980
Bst4CI	ACNGT	4 cut(s)	73, 229, 867, 1265
Bst6I	CTCTTC	4 cut(s)	22, 241, 521, 1184
BstACI	GRCGYC	6 cut(s)	291, 831, 924, 1032, 1125, 1245
BstC8I	GCNNGC	8 cut(s)	221, 256, 560, 617, 829, 835, 849, 882
BstDEI	CTNAG	5 cut(s)	284, 567, 716, 843, 1190
BstDSI	CCRYGG	2 cut(s)	690, 1167
BstF5I	GGATG	2 cut(s)	745, 762
BstFNI	CGCG	7 cut(s)	194, 196, 315, 692, 880, 1169, 1312
BstH2I	RGCGCY	4 cut(s)	524, 828, 834, 840
BstHHI	GCGC	6 cut(s)	196, 523, 827, 833, 839, 886
BstMAI	GTCTC	3 cut(s)	133, 207, 378
BstMCI	CGRYCG	2 cut(s)	474, 1218
BstNI	CCWGG	2 cut(s)	323, 980
BstSCI	CCNGG	3 cut(s)	57, 321, 978
BstUI	CGCG	7 cut(s)	194, 196, 315, 692, 880, 1169, 1312
BstV1I	GCAGC	5 cut(s)	21, 530, 649, 826, 987
BstV2I	GAAGAC	1 cut(s)	901
BstX2I	RGATCY	2 cut(s)	318, 942
BstYI	RGATCY	2 cut(s)	318, 942
BsuI	GTATCC	1 cut(s)	254
BsuRI	GGCC	3 cut(s)	233, 558, 984
BtgI	CCRYGG	2 cut(s)	690, 1167
BtgZI	GCGATG	1 cut(s)	1056
BtsCI	GGATG	2 cut(s)	745, 762
BtsIMutI	CAGTG	1 cut(s)	234
BveI	ACCTGC	1 cut(s)	895
Cac8I	GCNNGC	8 cut(s)	221, 256, 560, 617, 829, 835, 849, 882
CfoI	GCGC	6 cut(s)	196, 523, 827, 833, 839, 886
Cfr10I	RCCGGY	4 cut(s)	12, 554, 827, 833
Cfr13I	GGNCC	3 cut(s)	325, 982, 1011
Cfr42I	CCGCGG	2 cut(s)	693, 1170
CseI	GACGC	4 cut(s)	185, 1040, 1133, 1234
Csp6I	GTAC	5 cut(s)	16, 103, 352, 622, 634
CviAII	CATG	4 cut(s)	240, 373, 970, 1015
CviQI	GTAC	5 cut(s)	16, 103, 352, 622, 634
DdeI	CTNAG	5 cut(s)	284, 567, 716, 843, 1190
DinI	GGCGCC	1 cut(s)	832
DraI	TTTAAA	1 cut(s)	1288
DraIII	CACNNNGTG	1 cut(s)	229
Eam1104I	CTCTTC	4 cut(s)	22, 241, 521, 1184
EarI	CTCTTC	4 cut(s)	22, 241, 521, 1184
EciI	GGCGGA	3 cut(s)	289, 464, 1087
Ecl136II	GAGCTC	6 cut(s)	40, 715, 958, 1006, 1075, 1177
Eco24I	GRGCYC	6 cut(s)	42, 717, 960, 1008, 1077, 1179
Eco47I	GGWCC	2 cut(s)	325, 1011
Eco47III	AGCGCT	1 cut(s)	522
Eco53kI	GAGCTC	6 cut(s)	40, 715, 958, 1006, 1075, 1177
Eco57I	CTGAAG	1 cut(s)	545
Eco88I	CYCGRG	2 cut(s)	707, 1022
EcoICRI	GAGCTC	6 cut(s)	40, 715, 958, 1006, 1075, 1177
EcoRII	CCWGG	2 cut(s)	321, 978
EcoT38I	GRGCYC	6 cut(s)	42, 717, 960, 1008, 1077, 1179
EgeI	GGCGCC	1 cut(s)	832
EheI	GGCGCC	1 cut(s)	832
Esp3I	CGTCTC	1 cut(s)	378
FaeI	CATG	4 cut(s)	243, 376, 973, 1018
FalI	AAGNNNNNCTT	2 cut(s)	1112, 1144
FaqI	GGGAC	1 cut(s)	74
FatI	CATG	4 cut(s)	239, 372, 969, 1014
FauI	CCCGC	3 cut(s)	685, 697, 873
FbaI	TGATCA	2 cut(s)	1236, 1269
FblI	GTMKAC	2 cut(s)	1029, 1137
Fnu4HI	GCNGC	8 cut(s)	10, 313, 447, 519, 663, 840, 976, 1243
FokI	GGATG	2 cut(s)	752, 769
FriOI	GRGCYC	6 cut(s)	42, 717, 960, 1008, 1077, 1179
Fsp4HI	GCNGC	8 cut(s)	10, 313, 447, 519, 663, 840, 976, 1243
FspBI	CTAG	6 cut(s)	251, 255, 443, 666, 786, 822
GlaI	GCGC	6 cut(s)	195, 522, 826, 832, 838, 885
GluI	GCNGC	8 cut(s)	10, 313, 447, 519, 663, 840, 976, 1243
GsuI	CTGGAG	2 cut(s)	56, 920
HaeII	RGCGCY	4 cut(s)	524, 828, 834, 840
HaeIII	GGCC	3 cut(s)	233, 558, 984
HapII	CCGG	9 cut(s)	13, 58, 328, 555, 728, 828, 834, 1009, 1228
HgaI	GACGC	4 cut(s)	185, 1040, 1133, 1234
HhaI	GCGC	6 cut(s)	196, 523, 827, 833, 839, 886
Hin1I	GRCGYC	6 cut(s)	291, 831, 924, 1032, 1125, 1245
Hin1II	CATG	4 cut(s)	243, 376, 973, 1018
Hin6I	GCGC	6 cut(s)	194, 521, 825, 831, 837, 884
HinP1I	GCGC	6 cut(s)	194, 521, 825, 831, 837, 884
HincII	GTYRAC	3 cut(s)	534, 928, 1030
HindII	GTYRAC	3 cut(s)	534, 928, 1030
HinfI	GANTC	6 cut(s)	4, 83, 405, 580, 1094, 1114
HpaII	CCGG	9 cut(s)	13, 58, 328, 555, 728, 828, 834, 1009, 1228
HphI	GGTGA	6 cut(s)	13, 61, 544, 707, 855, 865
Hpy166II	GTNNAC	4 cut(s)	534, 928, 1030, 1138
Hpy188I	TCNGA	4 cut(s)	95, 132, 675, 955
Hpy188III	TCNNGA	4 cut(s)	334, 368, 601, 913
Hpy8I	GTNNAC	4 cut(s)	534, 928, 1030, 1138
HpyAV	CCTTC	2 cut(s)	257, 1138
HpyCH4III	ACNGT	4 cut(s)	73, 229, 867, 1265
HpyCH4IV	ACGT	2 cut(s)	291, 924
HpyCH4V	TGCA	5 cut(s)	518, 619, 760, 774, 1111
HpyF3I	CTNAG	5 cut(s)	284, 567, 716, 843, 1190
HpySE526I	ACGT	2 cut(s)	291, 924
Hsp92I	GRCGYC	6 cut(s)	291, 831, 924, 1032, 1125, 1245
Hsp92II	CATG	4 cut(s)	243, 376, 973, 1018
HspAI	GCGC	6 cut(s)	194, 521, 825, 831, 837, 884
KasI	GGCGCC	1 cut(s)	830
KroI	GCCGGC	2 cut(s)	827, 833
KroNI	GCCGGC	2 cut(s)	829, 835
Ksp22I	TGATCA	2 cut(s)	1236, 1269
KspI	CCGCGG	2 cut(s)	693, 1170
LguI	GCTCTTC	1 cut(s)	1184
Lsp1109I	GCAGC	5 cut(s)	21, 530, 649, 826, 987
LweI	GCATC	4 cut(s)	75, 747, 846, 1240
MaeI	CTAG	6 cut(s)	251, 255, 443, 666, 786, 822
MaeII	ACGT	2 cut(s)	291, 924
MaeIII	GTNAC	2 cut(s)	684, 861
MbiI	CCGCTC	1 cut(s)	733
MboII	GAAGA	6 cut(s)	39, 228, 439, 538, 901, 1171
MflI	RGATCY	2 cut(s)	318, 942
MhlI	GDGCHC	7 cut(s)	42, 717, 960, 1008, 1077, 1179, 1214
MluCI	AATT	4 cut(s)	134, 917, 1273, 1348
Mly113I	GGCGCC	1 cut(s)	831
MlyI	GAGTC	5 cut(s)	13, 92, 414, 589, 1088
MmeI	TCCRAC	2 cut(s)	717, 933
MreI	CGCCGGCG	2 cut(s)	827, 833
MroNI	GCCGGC	2 cut(s)	827, 833
MseI	TTAA	2 cut(s)	804, 1287
MslI	CAYNNNNRTG	1 cut(s)	610
MspA1I	CMGCKG	4 cut(s)	692, 851, 1169, 1242
MspI	CCGG	9 cut(s)	13, 58, 328, 555, 728, 828, 834, 1009, 1228
MspR9I	CCNGG	3 cut(s)	59, 323, 980
MvaI	CCWGG	2 cut(s)	323, 980
MvnI	CGCG	7 cut(s)	194, 196, 315, 692, 880, 1169, 1312
NaeI	GCCGGC	2 cut(s)	829, 835
NarI	GGCGCC	1 cut(s)	831
NciI	CCSGG	1 cut(s)	59
NgoMIV	GCCGGC	2 cut(s)	827, 833
NheI	GCTAGC	1 cut(s)	254
NlaIII	CATG	4 cut(s)	243, 376, 973, 1018
NlaIV	GGNNCC	1 cut(s)	832
NmeAIII	GCCGAG	4 cut(s)	919, 939, 968, 1126
NmuCI	GTSAC	1 cut(s)	861
PaeR7I	CTCGAG	2 cut(s)	707, 1022
PciSI	GCTCTTC	1 cut(s)	1184
PcsI	WCGNNNNNNNCGW	5 cut(s)	69, 930, 1038, 1098, 1131
PdiI	GCCGGC	2 cut(s)	829, 835
PfeI	GAWTC	1 cut(s)	1114
PfoI	TCCNGGA	1 cut(s)	321
PkrI	GCNGC	8 cut(s)	11, 314, 448, 520, 664, 841, 977, 1244
Ple19I	CGATCG	2 cut(s)	474, 1218
PleI	GAGTC	5 cut(s)	12, 91, 413, 588, 1088
PluTI	GGCGCC	1 cut(s)	834
PpsI	GAGTC	5 cut(s)	12, 91, 413, 588, 1088
Psp124BI	GAGCTC	6 cut(s)	42, 717, 960, 1008, 1077, 1179
Psp6I	CCWGG	2 cut(s)	321, 978
PspGI	CCWGG	2 cut(s)	321, 978
PspN4I	GGNNCC	1 cut(s)	832
PspPI	GGNCC	3 cut(s)	325, 982, 1011
PspXI	VCTCGAGB	2 cut(s)	707, 1022
PsuI	RGATCY	2 cut(s)	318, 942
PvuI	CGATCG	2 cut(s)	474, 1218
RsaI	GTAC	5 cut(s)	17, 104, 353, 623, 635
RsaNI	GTAC	5 cut(s)	16, 103, 352, 622, 634
RseI	CAYNNNNRTG	1 cut(s)	610
SacI	GAGCTC	6 cut(s)	42, 717, 960, 1008, 1077, 1179
SacII	CCGCGG	2 cut(s)	693, 1170
SalI	GTCGAC	1 cut(s)	1028
SapI	GCTCTTC	1 cut(s)	1184
SaqAI	TTAA	2 cut(s)	804, 1287
SatI	GCNGC	8 cut(s)	10, 313, 447, 519, 663, 840, 976, 1243
Sau96I	GGNCC	3 cut(s)	325, 982, 1011
ScaI	AGTACT	1 cut(s)	104
SchI	GAGTC	5 cut(s)	13, 92, 414, 589, 1088
ScrFI	CCNGG	3 cut(s)	59, 323, 980
SduI	GDGCHC	7 cut(s)	42, 717, 960, 1008, 1077, 1179, 1214
SfaNI	GCATC	4 cut(s)	75, 747, 846, 1240
SfoI	GGCGCC	1 cut(s)	832
Sfr274I	CTCGAG	2 cut(s)	707, 1022
Sfr303I	CCGCGG	2 cut(s)	693, 1170
SgrAI	CRCCGGYG	2 cut(s)	827, 833
SgrBI	CCGCGG	2 cut(s)	693, 1170
SinI	GGWCC	2 cut(s)	325, 1011
SlaI	CTCGAG	2 cut(s)	707, 1022
SmiMI	CAYNNNNRTG	1 cut(s)	610
SmlI	CTYRAG	4 cut(s)	599, 707, 1022, 1118
SmoI	CTYRAG	4 cut(s)	599, 707, 1022, 1118
Sse9I	AATT	4 cut(s)	134, 917, 1273, 1348
SspDI	GGCGCC	1 cut(s)	830
SspI	AATATT	1 cut(s)	412
SspMI	CTAG	6 cut(s)	251, 255, 443, 666, 786, 822
SstI	GAGCTC	6 cut(s)	42, 717, 960, 1008, 1077, 1179
StyD4I	CCNGG	3 cut(s)	57, 321, 978
TaaI	ACNGT	4 cut(s)	73, 229, 867, 1265
TaiI	ACGT	2 cut(s)	294, 927
TaqII	GACCGA	1 cut(s)	116
TasI	AATT	4 cut(s)	134, 917, 1273, 1348
TatI	WGTACW	4 cut(s)	102, 351, 621, 633
TauI	GCSGC	3 cut(s)	315, 449, 1245
TfiI	GAWTC	1 cut(s)	1114
Tru1I	TTAA	2 cut(s)	804, 1287
Tru9I	TTAA	2 cut(s)	804, 1287
TscAI	CASTG	1 cut(s)	234
TseFI	GTSAC	1 cut(s)	861
TseI	GCWGC	5 cut(s)	9, 518, 662, 839, 975
Tsp45I	GTSAC	1 cut(s)	861
TspDTI	ATGAA	3 cut(s)	228, 362, 1039
TspGWI	ACGGA	2 cut(s)	1010, 1123
TspRI	CASTG	1 cut(s)	234
VpaK11BI	GGWCC	2 cut(s)	325, 1011
XapI	RAATTY	1 cut(s)	917
XcmI	CCANNNNNNNNNTGG	1 cut(s)	31
XhoI	CTCGAG	2 cut(s)	707, 1022
XmiI	GTMKAC	2 cut(s)	1029, 1137
XspI	CTAG	6 cut(s)	251, 255, 443, 666, 786, 822
ZraI	GACGTC	2 cut(s)	292, 925
ZrmI	AGTACT	1 cut(s)	104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.