Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0015795

Physical Location & Seq

Genomic Coordinates Reverse (-)

51640204 .. 51644922

Gene Structure 4719 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0344400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGTATCACAGTCGTCTCGGCGTCCACCGCCTCATCTACCGCAGCCGCATGGTGCAGTATATAAAAACCGGCCTCATCGATCACGCCCTCCAGGTGTTCGACGAAATGACTCAGTCAAATTGCCGCGTGTTCAGCATAGACTACAATCGCTTCATTGGAGTGCTGGTCAAGCACTCGCGTTACGACCTCGCCGAGCATTATTACTACGAAATGGCGCCGCAAGGCTTCTCTCTAACCCCATTCACTTACTCGAGATTTATTTCTGGGTTGTGTAATATCAAGAATTTTACTCTCATTGAGAAGCTTCTTCGAGACATGGAGAGGCTCGGGTGTGTGCCTGACATTTGGGCTTTTAATATATATTTGAATCTTCTCTGCCAAGAAAATAGGATACAGTTGGCTCTGCAAGTGTTTGATAGGATGGTTGAGAAGGGGAGAGAGCCGGATGTTGTATCGTATACTATAGTTATTGATGGGTCCTGTAAAGCTGGAAAGTTTGATAATGCAGTTGAGGTTTGGAATGGTATGATTAGTCAAGGGTTTAGGCCTGATACTATTGCGTGCACCGCGCTTGTTGTTGGCTTGTGTGCAGGTGGAAAGGTTGATTTGGCTTATGACCTTGTAATTGGTGAGATGAAGGGTGGAGTCAAGTTCAATAATTTGATCTATAATGCGCTGATTAGTGGGTTTTGTCGAGCTCGTAGAATTGATAAGGCACAGGCAATTAAGTGGTTTATGAAGAGGAATGGGTGCCAGCCGGATTTGGTGACTCACAATGTGTTGTTGAATTATTGTTGTAATGAGTTCATGTTGGAGGAGGCAGACAAGTTGATGAAACAAATGGACAAGAGTGGGATGGAACTCGATGCCTATAGTTATAATGGGTTGCTCAAGGGCCTTTGTAAAGATAATAGACCCGAAAAGGCATATTTGTTGATGAGGAACGTGATGGAGCCAAAAGGTTTGTGTAATGTTGTTTCATTTAATACCATCATTACAGCATTTTGCAAGGCAGGGCAGACTAGAAGGGCATACAAACTGTTTGAGGAAATGTTTCAAAAAGATATTTTACCTGATGTGGTTACATTTACCATCCTGATAGAAGCTTTATTAAGAGAAGGTAGTTCAGATATAGCCAAGAAGCTTCTTGATCAGATGACAGGGATGGATCTGTTACCTGATCGTATATTTTACACTACAATAATTGATCACCTATGTAAGAGTGGGAAGATTGCAATGGCTTTTGACGTTTTCAATGATATGTTAGAGAAGCGAATCACCGCTGATGTGGTTTTGTATAATGCACTCATTAGCGGGCTTTGCAGGGCTTCAAGAGTGACTGAAGCCATGCATTTATATGAGGAAATGCAGACTAGAGGATGCTGTCCTGATGAGGTAACTTTCAAAGTGATAATTAGAGGTCTTATAAGAGACAAGAGGCTTTCTGTGGCTTGTGGGGTATGGGATGAGATGATGGAGAAGGGCTTTACTCTGGACAGAGTTCTTTCCCAGACACTGATTAATGCTGTCCATTCAAAAGATGTTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000079 GO:0000307 GO:0001932 GO:0001934 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010562 GO:0010604 GO:0010628 GO:0016538 GO:0019207 GO:0019219 GO:0019220 GO:0019222 GO:0019887 GO:0030234 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0032991 GO:0033674 GO:0042325 GO:0042327 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043549 GO:0044093 GO:0044424 GO:0044464 GO:0045737 GO:0045787 GO:0045859 GO:0045860 GO:0045893 GO:0045935 GO:0045937 GO:0045944 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051338 GO:0051347 GO:0051726 GO:0060255 GO:0061695 GO:0065007 GO:0065009 GO:0071900 GO:0071902 GO:0080090 GO:0098772 GO:1901407 GO:1901409 GO:1902494 GO:1902554 GO:1902680 GO:1902911 GO:1903506 GO:1903508 GO:1904029 GO:1904031 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko05202 map05202

Pfam Domains

Protein Families

Cyclin_C Cyclin_N

Protein Analysis

516

Amino Acids

58.96

Weight (kDa)

7.99

Isoelectric Point (pI)

31.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	87 - 127	7.2e-06	PPR repeat family
PPR_3	PF13812	101 - 157	4.2e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	113 - 162	8.9e-15	PPR repeat family
PPR_1	PF12854	144 - 176	1.4e-10	PPR repeat
PPR_2	PF13041	148 - 196	1e-11	PPR repeat family
PPR	PF01535	151 - 181	2.6e-06	PPR repeat
PPR_3	PF13812	214 - 267	1.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	215 - 241	1.9e-06	PPR repeat
PPR_2	PF13041	221 - 267	1.6e-12	PPR repeat family
PPR_2	PF13041	256 - 302	1.1e-12	PPR repeat family
PPR_1	PF12854	321 - 351	1.7e-10	PPR repeat
PPR_3	PF13812	323 - 369	1.3e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	324 - 371	3.4e-17	PPR repeat family
TPR_24	PF23276	325 - 420	7.4e-06	Fungal tetratrico peptide repeats
PPR	PF01535	326 - 355	2.2e-07	PPR repeat
PPR_3	PF13812	346 - 403	3.3e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	355 - 387	6.2e-07	PPR repeat
PPR_3	PF13812	381 - 438	7.1e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	390 - 421	1.9e-07	PPR repeat
PPR_2	PF13041	393 - 431	2.3e-09	PPR repeat family
TPR_24	PF23276	406 - 512	1e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	417 - 473	6.1e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	426 - 457	1.3e-09	PPR repeat
PPR_2	PF13041	429 - 476	8.9e-17	PPR repeat family
PPR	PF01535	431 - 461	2.7e-08	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015795)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66400
fragaria_vesca	FvH4_4g33640 FvH4_4g33721 FvH4_6g16340
rosa_chinensis	RchiOBHm_Chr4g0443101
rosa_laevigata	RLG00000005953
rosa_multiflora	Rmu_sc0007968.1_g000015 Rmu_sc0008069.1_g000002
rosa_roxburghii	Rroxscaffold_5G00383730
rosa_rugosa	Rorug04G0344400
rosa_samantha	Rh3AG156900 Rh4BG410300 Rh4CG425900 Rh4DG405300
rosa_wichuraiana	Rw4G034370

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	879, 1427
AarI	CACCTGC	1 cut(s)	581
Acc36I	ACCTGC	1 cut(s)	581
AccB1I	GGYRCC	2 cut(s)	214, 750
AccI	GTMKAC	1 cut(s)	458
AccII	CGCG	3 cut(s)	126, 178, 569
AciI	CCGC	8 cut(s)	28, 40, 46, 124, 218, 567, 1281, 1314
AclWI	GGATC	1 cut(s)	1176
AcsI	RAATTY	1 cut(s)	283
AcuI	CTGAAG	1 cut(s)	1362
AcyI	GRCGYC	2 cut(s)	21, 215
AdeI	CACNNNGTG	1 cut(s)	778
AgsI	TTSAA	8 cut(s)	367, 655, 787, 1058, 1255, 1332, 1405, 1536
AjnI	CCWGG	1 cut(s)	90
AluBI	AGCT	5 cut(s)	304, 488, 698, 1106, 1144
AluI	AGCT	5 cut(s)	304, 488, 698, 1106, 1144
Alw21I	GWGCWC	2 cut(s)	566, 700
Alw26I	GTCTC	3 cut(s)	20, 306, 1425
Alw44I	GTGCAC	1 cut(s)	562
AlwI	GGATC	1 cut(s)	1176
AlwNI	CAGNNNCTG	1 cut(s)	1516
Ama87I	CYCGRG	2 cut(s)	250, 326
AoxI	GGCC	3 cut(s)	70, 545, 895
ApaLI	GTGCAC	1 cut(s)	562
ApeKI	GCWGC	1 cut(s)	42
ApoI	RAATTY	1 cut(s)	283
AseI	ATTAAT	1 cut(s)	1521
Asp700I	GAANNNNTTC	1 cut(s)	1053
AspLEI	GCGC	3 cut(s)	217, 571, 676
AspS9I	GGNCC	2 cut(s)	477, 895
AsuHPI	GGTGA	4 cut(s)	641, 778, 1202, 1270
AvaI	CYCGRG	2 cut(s)	250, 326
AvaII	GGWCC	1 cut(s)	477
BaeGI	GKGCMC	1 cut(s)	566
BanI	GGYRCC	2 cut(s)	214, 750
BanII	GRGCYC	1 cut(s)	700
Bbv12I	GWGCWC	2 cut(s)	566, 700
BbvI	GCAGC	1 cut(s)	54
BccI	CCATC	8 cut(s)	415, 467, 850, 943, 998, 1100, 1159, 1468
BciT130I	CCWGG	1 cut(s)	92
BciVI	GTATCC	1 cut(s)	384
BclI	TGATCA	2 cut(s)	1150, 1207
BcoDI	GTCTC	3 cut(s)	20, 306, 1425
BfaI	CTAG	2 cut(s)	1023, 1374
BfmI	CTRYAG	2 cut(s)	462, 871
BfoI	RGCGCY	1 cut(s)	218
BfuAI	ACCTGC	1 cut(s)	581
BfuI	GTATCC	1 cut(s)	384
BisI	GCNGC	4 cut(s)	43, 46, 124, 218
BlsI	GCNGC	4 cut(s)	44, 47, 125, 219
Bme1390I	CCNGG	1 cut(s)	92
Bme18I	GGWCC	1 cut(s)	477
BmeT110I	CYCGRG	2 cut(s)	250, 326
BmgT120I	GGNCC	2 cut(s)	477, 895
BmiI	GGNNCC	4 cut(s)	216, 478, 752, 954
BmrFI	CCNGG	1 cut(s)	92
BmsI	GCATC	2 cut(s)	856, 1370
BpmI	CTGGAG	1 cut(s)	74
BpuEI	CTTGAG	1 cut(s)	875
Bsa29I	ATCGAT	1 cut(s)	78
BsaHI	GRCGYC	2 cut(s)	21, 215
BsaXI	ACNNNNNCTCC	2 cut(s)	150, 180
Bse118I	RCCGGY	1 cut(s)	68
Bse3DI	GCAATG	1 cut(s)	1242
BseBI	CCWGG	1 cut(s)	92
BseCI	ATCGAT	1 cut(s)	78
BseGI	GGATG	7 cut(s)	426, 451, 861, 1092, 1170, 1385, 1471
BseMI	GCAATG	1 cut(s)	1242
BseMII	CTCAG	1 cut(s)	125
BseRI	GAGGAG	1 cut(s)	830
BseSI	GKGCMC	1 cut(s)	566
BseXI	GCAGC	1 cut(s)	54
BsgI	GTGCAG	2 cut(s)	74, 609
Bsh1236I	CGCG	3 cut(s)	126, 178, 569
BshFI	GGCC	3 cut(s)	72, 547, 897
BshNI	GGYRCC	2 cut(s)	214, 750
BshVI	ATCGAT	1 cut(s)	78
BsiHKAI	GWGCWC	2 cut(s)	566, 700
BsiHKCI	CYCGRG	2 cut(s)	250, 326
BsiSI	CCGG	3 cut(s)	69, 443, 758
BsmAI	GTCTC	3 cut(s)	20, 306, 1425
BsmBI	CGTCTC	1 cut(s)	20
BsnI	GGCC	3 cut(s)	72, 547, 897
BsoBI	CYCGRG	2 cut(s)	250, 326
Bsp1286I	GDGCHC	2 cut(s)	566, 700
Bsp143I	GATC	6 cut(s)	79, 663, 1150, 1168, 1180, 1207
BspACI	CCGC	8 cut(s)	28, 40, 46, 124, 218, 567, 1281, 1314
BspANI	GGCC	3 cut(s)	72, 547, 897
BspCNI	CTCAG	1 cut(s)	124
BspDI	ATCGAT	1 cut(s)	78
BspFNI	CGCG	3 cut(s)	126, 178, 569
BspLI	GGNNCC	4 cut(s)	216, 478, 752, 954
BspMI	ACCTGC	1 cut(s)	581
BspPI	GGATC	1 cut(s)	1176
BspT107I	GGYRCC	2 cut(s)	214, 750
BsrDI	GCAATG	1 cut(s)	1242
BsrFI	RCCGGY	1 cut(s)	68
BssAI	RCCGGY	1 cut(s)	68
BssMI	GATC	6 cut(s)	79, 663, 1150, 1168, 1180, 1207
BssNAI	GTATAC	1 cut(s)	459
BssNI	GRCGYC	2 cut(s)	21, 215
Bst1107I	GTATAC	1 cut(s)	459
Bst2UI	CCWGG	1 cut(s)	92
Bst4CI	ACNGT	3 cut(s)	11, 396, 1041
Bst6I	CTCTTC	1 cut(s)	734
BstACI	GRCGYC	2 cut(s)	21, 215
BstC8I	GCNNGC	3 cut(s)	562, 755, 1316
BstDEI	CTNAG	1 cut(s)	111
BstF5I	GGATG	7 cut(s)	426, 451, 861, 1092, 1170, 1385, 1471
BstFNI	CGCG	3 cut(s)	126, 178, 569
BstH2I	RGCGCY	1 cut(s)	218
BstHHI	GCGC	3 cut(s)	217, 571, 676
BstKTI	GATC	6 cut(s)	82, 666, 1153, 1171, 1183, 1210
BstMAI	GTCTC	3 cut(s)	20, 306, 1425
BstMBI	GATC	6 cut(s)	79, 663, 1150, 1168, 1180, 1207
BstMWI	GCNNNNNNNGC	5 cut(s)	27, 132, 169, 566, 1320
BstNI	CCWGG	1 cut(s)	92
BstSCI	CCNGG	1 cut(s)	90
BstSFI	CTRYAG	2 cut(s)	462, 871
BstSLI	GKGCMC	1 cut(s)	566
BstUI	CGCG	3 cut(s)	126, 178, 569
BstV1I	GCAGC	1 cut(s)	54
BstX2I	RGATCY	1 cut(s)	1168
BstYI	RGATCY	1 cut(s)	1168
BstZ17I	GTATAC	1 cut(s)	459
Bsu15I	ATCGAT	1 cut(s)	78
BsuI	GTATCC	1 cut(s)	384
BsuRI	GGCC	3 cut(s)	72, 547, 897
BsuTUI	ATCGAT	1 cut(s)	78
BtsCI	GGATG	7 cut(s)	426, 451, 861, 1092, 1170, 1385, 1471
BtsIMutI	CAGTG	1 cut(s)	1514
BveI	ACCTGC	1 cut(s)	581
Cac8I	GCNNGC	3 cut(s)	562, 755, 1316
CaiI	CAGNNNCTG	1 cut(s)	1516
CfoI	GCGC	3 cut(s)	217, 571, 676
Cfr10I	RCCGGY	1 cut(s)	68
Cfr13I	GGNCC	2 cut(s)	477, 895
ClaI	ATCGAT	1 cut(s)	78
CseI	GACGC	1 cut(s)	10
CviAII	CATG	5 cut(s)	49, 316, 808, 1348, 1548
DdeI	CTNAG	1 cut(s)	111
DinI	GGCGCC	1 cut(s)	216
DpnI	GATC	6 cut(s)	81, 665, 1152, 1170, 1182, 1209
DpnII	GATC	6 cut(s)	79, 663, 1150, 1168, 1180, 1207
DraIII	CACNNNGTG	1 cut(s)	778
Eam1104I	CTCTTC	1 cut(s)	734
EarI	CTCTTC	1 cut(s)	734
Ecl136II	GAGCTC	1 cut(s)	698
Eco147I	AGGCCT	1 cut(s)	547
Eco24I	GRGCYC	1 cut(s)	700
Eco47I	GGWCC	1 cut(s)	477
Eco53kI	GAGCTC	1 cut(s)	698
Eco57I	CTGAAG	1 cut(s)	1362
Eco88I	CYCGRG	2 cut(s)	250, 326
EcoICRI	GAGCTC	1 cut(s)	698
EcoO109I	RGGNCCY	2 cut(s)	477, 895
EcoRII	CCWGG	1 cut(s)	90
EcoT22I	ATGCAT	1 cut(s)	1353
EcoT38I	GRGCYC	1 cut(s)	700
EgeI	GGCGCC	1 cut(s)	216
EheI	GGCGCC	1 cut(s)	216
Esp3I	CGTCTC	1 cut(s)	20
FaeI	CATG	5 cut(s)	52, 319, 811, 1351, 1551
FatI	CATG	5 cut(s)	48, 315, 807, 1347, 1547
FauI	CCCGC	1 cut(s)	1307
FbaI	TGATCA	2 cut(s)	1150, 1207
FblI	GTMKAC	1 cut(s)	458
Fnu4HI	GCNGC	4 cut(s)	43, 46, 124, 218
FokI	GGATG	7 cut(s)	433, 458, 868, 1079, 1177, 1392, 1478
FriOI	GRGCYC	1 cut(s)	700
Fsp4HI	GCNGC	4 cut(s)	43, 46, 124, 218
FspBI	CTAG	2 cut(s)	1023, 1374
GlaI	GCGC	3 cut(s)	216, 570, 675
GluI	GCNGC	4 cut(s)	43, 46, 124, 218
GsuI	CTGGAG	1 cut(s)	74
HaeII	RGCGCY	1 cut(s)	218
HaeIII	GGCC	3 cut(s)	72, 547, 897
HapII	CCGG	3 cut(s)	69, 443, 758
HgaI	GACGC	1 cut(s)	10
HhaI	GCGC	3 cut(s)	217, 571, 676
Hin1I	GRCGYC	2 cut(s)	21, 215
Hin1II	CATG	5 cut(s)	52, 319, 811, 1351, 1551
Hin6I	GCGC	3 cut(s)	215, 569, 674
HinP1I	GCGC	3 cut(s)	215, 569, 674
HindIII	AAGCTT	3 cut(s)	302, 1104, 1142
HinfI	GANTC	5 cut(s)	109, 367, 645, 769, 1275
HpaII	CCGG	3 cut(s)	69, 443, 758
HphI	GGTGA	4 cut(s)	641, 778, 1202, 1270
Hpy166II	GTNNAC	3 cut(s)	25, 459, 564
Hpy188I	TCNGA	2 cut(s)	1129, 1155
Hpy188III	TCNNGA	8 cut(s)	252, 280, 311, 1096, 1148, 1332, 1388, 1493
Hpy8I	GTNNAC	3 cut(s)	25, 459, 564
Hpy99I	CGWCG	1 cut(s)	104
HpyAV	CCTTC	5 cut(s)	424, 631, 1020, 1112, 1474
HpyCH4III	ACNGT	3 cut(s)	11, 396, 1041
HpyCH4IV	ACGT	2 cut(s)	945, 1248
HpyF10VI	GCNNNNNNNGC	5 cut(s)	27, 132, 169, 566, 1320
HpyF3I	CTNAG	1 cut(s)	111
HpySE526I	ACGT	2 cut(s)	945, 1248
Hsp92I	GRCGYC	2 cut(s)	21, 215
Hsp92II	CATG	5 cut(s)	52, 319, 811, 1351, 1551
HspAI	GCGC	3 cut(s)	215, 569, 674
KasI	GGCGCC	1 cut(s)	214
Ksp22I	TGATCA	2 cut(s)	1150, 1207
Kzo9I	GATC	6 cut(s)	79, 663, 1150, 1168, 1180, 1207
LmnI	GCTCC	1 cut(s)	952
Lsp1109I	GCAGC	1 cut(s)	54
LweI	GCATC	2 cut(s)	856, 1370
MaeI	CTAG	2 cut(s)	1023, 1374
MaeII	ACGT	2 cut(s)	945, 1248
MaeIII	GTNAC	6 cut(s)	179, 766, 1081, 1173, 1336, 1396
MalI	GATC	6 cut(s)	81, 665, 1152, 1170, 1182, 1209
MboI	GATC	6 cut(s)	79, 663, 1150, 1168, 1180, 1207
MboII	GAAGA	4 cut(s)	299, 362, 751, 1240
MflI	RGATCY	1 cut(s)	1168
MhlI	GDGCHC	2 cut(s)	566, 700
MluCI	AATT	9 cut(s)	118, 283, 624, 658, 705, 723, 787, 1203, 1413
Mly113I	GGCGCC	1 cut(s)	215
MlyI	GAGTC	3 cut(s)	103, 654, 763
MmeI	TCCRAC	1 cut(s)	792
Mph1103I	ATGCAT	1 cut(s)	1353
MroXI	GAANNNNTTC	1 cut(s)	1053
MseI	TTAA	5 cut(s)	354, 726, 984, 1112, 1521
MslI	CAYNNNNRTG	2 cut(s)	158, 1356
MspA1I	CMGCKG	1 cut(s)	1283
MspI	CCGG	3 cut(s)	69, 443, 758
MspR9I	CCNGG	1 cut(s)	92
MvaI	CCWGG	1 cut(s)	92
MvnI	CGCG	3 cut(s)	126, 178, 569
MwoI	GCNNNNNNNGC	5 cut(s)	27, 132, 169, 566, 1320
NarI	GGCGCC	1 cut(s)	215
NdeII	GATC	6 cut(s)	79, 663, 1150, 1168, 1180, 1207
NlaIII	CATG	5 cut(s)	52, 319, 811, 1351, 1551
NlaIV	GGNNCC	4 cut(s)	216, 478, 752, 954
NmeAIII	GCCGAG	1 cut(s)	217
NmuCI	GTSAC	2 cut(s)	766, 1336
NsiI	ATGCAT	1 cut(s)	1353
PaeR7I	CTCGAG	1 cut(s)	250
PaqCI	CACCTGC	1 cut(s)	581
PceI	AGGCCT	1 cut(s)	547
PcsI	WCGNNNNNNNCGW	1 cut(s)	189
PdmI	GAANNNNTTC	1 cut(s)	1053
PfeI	GAWTC	2 cut(s)	367, 1275
PflFI	GACNNNGTC	1 cut(s)	112
PkrI	GCNGC	4 cut(s)	44, 47, 125, 219
PleI	GAGTC	3 cut(s)	103, 653, 763
PluTI	GGCGCC	1 cut(s)	218
PpsI	GAGTC	3 cut(s)	103, 653, 763
PpuMI	RGGWCCY	1 cut(s)	477
PshBI	ATTAAT	1 cut(s)	1521
PsiI	TTATAA	2 cut(s)	879, 1427
Psp124BI	GAGCTC	1 cut(s)	700
Psp5II	RGGWCCY	1 cut(s)	477
Psp6I	CCWGG	1 cut(s)	90
PspGI	CCWGG	1 cut(s)	90
PspN4I	GGNNCC	4 cut(s)	216, 478, 752, 954
PspPI	GGNCC	2 cut(s)	477, 895
PspPPI	RGGWCCY	1 cut(s)	477
PstNI	CAGNNNCTG	1 cut(s)	1516
PsuI	RGATCY	1 cut(s)	1168
PsyI	GACNNNGTC	1 cut(s)	112
RseI	CAYNNNNRTG	2 cut(s)	158, 1356
SacI	GAGCTC	1 cut(s)	700
SaqAI	TTAA	5 cut(s)	354, 726, 984, 1112, 1521
SatI	GCNGC	4 cut(s)	43, 46, 124, 218
Sau3AI	GATC	6 cut(s)	79, 663, 1150, 1168, 1180, 1207
Sau96I	GGNCC	2 cut(s)	477, 895
SchI	GAGTC	3 cut(s)	103, 654, 763
ScrFI	CCNGG	1 cut(s)	92
SduI	GDGCHC	2 cut(s)	566, 700
SfaNI	GCATC	2 cut(s)	856, 1370
SfcI	CTRYAG	2 cut(s)	462, 871
SfoI	GGCGCC	1 cut(s)	216
Sfr274I	CTCGAG	1 cut(s)	250
SinI	GGWCC	1 cut(s)	477
SlaI	CTCGAG	1 cut(s)	250
SmiMI	CAYNNNNRTG	2 cut(s)	158, 1356
SmlI	CTYRAG	2 cut(s)	250, 890
SmoI	CTYRAG	2 cut(s)	250, 890
Sse9I	AATT	9 cut(s)	118, 283, 624, 658, 705, 723, 787, 1203, 1413
SseBI	AGGCCT	1 cut(s)	547
SsiI	CCGC	8 cut(s)	28, 40, 46, 124, 218, 567, 1281, 1314
SspDI	GGCGCC	1 cut(s)	214
SspMI	CTAG	2 cut(s)	1023, 1374
SstI	GAGCTC	1 cut(s)	700
StuI	AGGCCT	1 cut(s)	547
StyD4I	CCNGG	1 cut(s)	90
TaaI	ACNGT	3 cut(s)	11, 396, 1041
TaiI	ACGT	2 cut(s)	948, 1251
TaqI	TCGA	6 cut(s)	78, 99, 251, 310, 694, 864
TasI	AATT	9 cut(s)	118, 283, 624, 658, 705, 723, 787, 1203, 1413
TauI	GCSGC	3 cut(s)	48, 126, 220
TfiI	GAWTC	2 cut(s)	367, 1275
Tru1I	TTAA	5 cut(s)	354, 726, 984, 1112, 1521
Tru9I	TTAA	5 cut(s)	354, 726, 984, 1112, 1521
TscAI	CASTG	1 cut(s)	1521
TseFI	GTSAC	2 cut(s)	766, 1336
TseI	GCWGC	1 cut(s)	42
Tsp45I	GTSAC	2 cut(s)	766, 1336
TspDTI	ATGAA	6 cut(s)	142, 650, 752, 796, 848, 969
TspRI	CASTG	1 cut(s)	1521
Tth111I	GACNNNGTC	1 cut(s)	112
VneI	GTGCAC	1 cut(s)	562
VpaK11BI	GGWCC	1 cut(s)	477
VspI	ATTAAT	1 cut(s)	1521
XapI	RAATTY	1 cut(s)	283
XhoI	CTCGAG	1 cut(s)	250
XmiI	GTMKAC	1 cut(s)	458
XmnI	GAANNNNTTC	1 cut(s)	1053
XspI	CTAG	2 cut(s)	1023, 1374
Zsp2I	ATGCAT	1 cut(s)	1353

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.