Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0005591

Physical Location & Seq

Genomic Coordinates Forward (+)

16615742 .. 16617891

Gene Structure 2150 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007419

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1437 bp

ATGGAAAGCTTTGGTGGCTCTGGATTTTCTGCTGGAGGATGCATTGTAAGGAAGAAAAGGAGTGTTGTATCACATAAACCTCGCTTGGATCCACTCACATTTTCTGAGAGGTCTAATATCTTGCTACGAATTGTACATCCCTTTGGCAAAGAAAGCCTTGATAAGAATCATGATAGTAAGGAGAAAGGAGTGCTTTCTGATGGACTGCGAAGTGAGAAAAGGCCGAAGAAATTAAAGCTTAAGCTTCGAGGTGTTACTCATACAATCCAAACCAAGTGTACAGTTGATTCTAGTCTTGGTGGTGGCTCTTCCATACCTAAATCCTCATGCCCTTCTGATGACTTCATACCCCAACCGAAGCCACTTCTCCAGGATGGCAAACCCTTCTGTTCTTCTGATGGAGGCAAAGGCATTGGAGTTAAACGGAAATACTCCTTGAAATTTGACTCTACTTTGAGAAAGGAGTATTCTTTAAAAGGTAAAATTTCCAGGGAAAATATTCCTGAGGATGGTGAACCAGCTCGTAAGAGCAAGAGGATTCCTAGGAGACGTGTCTTGGATGTGGGACTTAGTGAAGATGGTAACGAAGATGGGGAAATTCGATTCCTTGAAAGACTAAATGCTTCTAAGGTTGCTCTTTCAAAGAGAAATCAAATGGATGGTGATCATGGAGGTGATATTGGAAACTGTAAATTACCAAGGCTGCGGAAACATGGTGGAATAAAGTCAAGATCAGAAAAAATGTATGAGGATAAAGACTATTTGGGAGAAGAAGAACTGACATCTGATGATGAACTTCAATCTAATGGGAAGATGCTGAAAAGGGGATCTCTTAGTTTACTTCTGGAAGGGCCGCAAAAGTCCACGCCCACCACACGTAACCGGGCCCTTCAGTCTGGGATAGATATCTTAACTGGTTCTGGTTCAAGCGTTGTTAACCCTGCAAATCTGTTGCTTCCTGCCCCATCTAGAAAAAAGAAGGAGAAAATCTCTGAAGTGGATAAGCAATCAAAGAAAGCCGAGGCTGCACAGAGACGTAAAATACAAACAGAGAAGATAGCTAGAGAAGCTGAGGCTGAGGCAATCAGAAAGATACTTGGTCAAGATTCGAAGAAGAAGAAGAGGGAAGAAGAACTGAAGCAGAAGAGGGATGAATTGTCACAGGGGAGGAATGGCAGTGCTGTCACACTGGCACCAAACACTGTCCGATGGGTCAATGGTCCTCATGGAACGGTCGTTACATTCTCTGATGATATTGGTCTGCCGAACATTTTCAGTCCAGTGCCCTGCAGCTACCCTCCCCCACGTGAAAAATGTGCTGGTCCAAATTGTACAAATGCATACAAGTATCGGGATTCTAAGTCCAAGCTCCCCCTTTGCAGTCTCCACTGCTACAAGGCATTGCACGGAAAGACGCAGCCTCTAATTGCTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PAPA-1 zf-HIT

Protein Analysis

479

Amino Acids

52.73

Weight (kDa)

9.73

Isoelectric Point (pI)

55.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAPA-1	PF04795	335 - 418	7.6e-19	PAPA-1-like conserved region
zf-HIT	PF04438	435 - 466	1e-06	HIT zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005591)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06660
fragaria_vesca	FvH4_4g19561 FvH4_4g19561 FvH4_4g19561 FvH4_4g19561 FvH4_4g19561
malus_domestica	MD13G1155600.v1.1 MD16G1155300.v1.1
prunus_persica	Prupe.1G118900_v2.0.a1 Prupe.1G118900_v2.0.a1 Prupe.1G118900_v2.0.a1 Prupe.1G118900_v2.0.a1 Prupe.1G118900_v2.0.a1 Prupe.1G118900_v2.0.a1 Prupe.1G118900_v2.0.a1
pyrus_communis	pycom13g13260
rosa_chinensis	RchiOBHm_Chr4g0424821
rosa_laevigata	RLG00000007419
rosa_multiflora	Rmu_sc0003608.1_g000022 Rmu_sc0007418.1_g000001
rosa_roxburghii	Rroxscaffold_5G00367040
rosa_rugosa	Rorug04G0199300
rosa_samantha	Rh4AG257100 Rh4BG262400 Rh4CG273400 Rh4DG258200
rosa_wichuraiana	Rw4G022180 Rw4G024040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1192
AciI	CCGC	2 cut(s)	706, 854
AclWI	GGATC	3 cut(s)	83, 96, 835
AcsI	RAATTY	3 cut(s)	440, 483, 597
AcuI	CTGAAG	3 cut(s)	875, 1014, 1157
AcvI	CACGTG	1 cut(s)	1307
AfaI	GTAC	3 cut(s)	135, 280, 1333
AfiI	CCNNNNNNNGG	1 cut(s)	509
AflII	CTTAAG	1 cut(s)	239
AflIII	ACRYGT	2 cut(s)	550, 875
AgsI	TTSAA	5 cut(s)	439, 611, 642, 800, 927
AjiI	CACGTC	1 cut(s)	551
AjnI	CCWGG	2 cut(s)	369, 488
AluBI	AGCT	8 cut(s)	9, 238, 244, 521, 1061, 1070, 1293, 1369
AluI	AGCT	8 cut(s)	9, 238, 244, 521, 1061, 1070, 1293, 1369
Alw26I	GTCTC	3 cut(s)	541, 1027, 1388
AlwI	GGATC	3 cut(s)	83, 96, 835
AoxI	GGCC	3 cut(s)	221, 851, 885
ApaI	GGGCCC	1 cut(s)	889
ApeKI	GCWGC	4 cut(s)	703, 1025, 1290, 1417
ApoI	RAATTY	3 cut(s)	440, 483, 597
Asp700I	GAANNNNTTC	2 cut(s)	498, 1271
AspA2I	CCTAGG	1 cut(s)	542
AspS9I	GGNCC	5 cut(s)	851, 885, 886, 1220, 1322
AsuC2I	CCSGG	1 cut(s)	884
AsuHPI	GGTGA	3 cut(s)	524, 674, 686
AsuII	TTCGAA	1 cut(s)	1109
AvaII	GGWCC	2 cut(s)	1220, 1322
AvrII	CCTAGG	1 cut(s)	542
AxyI	CCTNAGG	1 cut(s)	504
BaeGI	GKGCMC	2 cut(s)	889, 1287
BamHI	GGATCC	1 cut(s)	88
BanI	GGYRCC	1 cut(s)	1192
BanII	GRGCYC	1 cut(s)	889
BbrPI	CACGTG	1 cut(s)	1307
BbvCI	CCTCAGC	2 cut(s)	1071, 1077
BbvI	GCAGC	4 cut(s)	690, 1012, 1302, 1429
BccI	CCATC	9 cut(s)	194, 368, 392, 503, 572, 584, 653, 973, 1203
BciT130I	CCWGG	2 cut(s)	371, 490
BclI	TGATCA	1 cut(s)	664
BcnI	CCSGG	1 cut(s)	884
BcoDI	GTCTC	3 cut(s)	541, 1027, 1388
BfaI	CTAG	4 cut(s)	291, 543, 969, 1062
BfmI	CTRYAG	1 cut(s)	1288
BfrI	CTTAAG	1 cut(s)	239
BisI	GCNGC	5 cut(s)	704, 854, 1026, 1291, 1418
BlnI	CCTAGG	1 cut(s)	542
BlsI	GCNGC	5 cut(s)	705, 855, 1027, 1292, 1419
Bme1390I	CCNGG	3 cut(s)	371, 490, 884
Bme18I	GGWCC	2 cut(s)	1220, 1322
BmgBI	CACGTC	1 cut(s)	551
BmgT120I	GGNCC	5 cut(s)	851, 885, 886, 1220, 1322
BmiI	GGNNCC	3 cut(s)	90, 887, 1194
BmrFI	CCNGG	3 cut(s)	371, 490, 884
BmsI	GCATC	2 cut(s)	29, 804
BplI	GAGNNNNNCTC	2 cut(s)	974, 1006
BpmI	CTGGAG	2 cut(s)	54, 353
Bpu10I	CCTNAGC	2 cut(s)	1071, 1077
Bpu14I	TTCGAA	1 cut(s)	1109
BpuMI	CCSGG	1 cut(s)	884
BsaAI	YACGTR	2 cut(s)	878, 1307
BsaBI	GATNNNNATC	3 cut(s)	165, 663, 905
BsaJI	CCNNGG	4 cut(s)	489, 542, 698, 1020
Bsc4I	CCNNNNNNNGG	1 cut(s)	509
Bse1I	ACTGG	3 cut(s)	919, 1194, 1280
Bse21I	CCTNAGG	1 cut(s)	504
Bse3DI	GCAATG	1 cut(s)	1400
Bse8I	GATNNNNATC	3 cut(s)	165, 663, 905
BseBI	CCWGG	2 cut(s)	371, 490
BseDI	CCNNGG	4 cut(s)	489, 542, 698, 1020
BseGI	GGATG	7 cut(s)	44, 136, 379, 514, 565, 664, 1156
BseJI	GATNNNNATC	3 cut(s)	165, 663, 905
BseLI	CCNNNNNNNGG	1 cut(s)	509
BseMI	GCAATG	1 cut(s)	1400
BseMII	CTCAG	4 cut(s)	96, 495, 1062, 1068
BseNI	ACTGG	3 cut(s)	919, 1194, 1280
BseSI	GKGCMC	2 cut(s)	889, 1287
BseXI	GCAGC	4 cut(s)	690, 1012, 1302, 1429
BsgI	GTGCAG	1 cut(s)	1011
Bsh1285I	CGRYCG	1 cut(s)	1236
BshFI	GGCC	3 cut(s)	223, 853, 887
BshNI	GGYRCC	1 cut(s)	1192
BsiEI	CGRYCG	1 cut(s)	1236
BsiSI	CCGG	1 cut(s)	883
BslFI	GGGAC	1 cut(s)	579
BslI	CCNNNNNNNGG	1 cut(s)	509
BsmAI	GTCTC	3 cut(s)	541, 1027, 1388
BsmBI	CGTCTC	2 cut(s)	541, 1027
BsmFI	GGGAC	1 cut(s)	579
BsnI	GGCC	3 cut(s)	223, 853, 887
Bsp119I	TTCGAA	1 cut(s)	1109
Bsp120I	GGGCCC	1 cut(s)	885
Bsp1286I	GDGCHC	2 cut(s)	889, 1287
Bsp1407I	TGTACA	3 cut(s)	133, 278, 1331
Bsp143I	GATC	4 cut(s)	88, 664, 731, 827
BspACI	CCGC	2 cut(s)	706, 854
BspANI	GGCC	3 cut(s)	223, 853, 887
BspCNI	CTCAG	4 cut(s)	97, 496, 1063, 1069
BspHI	TCATGA	1 cut(s)	169
BspLI	GGNNCC	3 cut(s)	90, 887, 1194
BspMAI	CTGCAG	1 cut(s)	1292
BspPI	GGATC	3 cut(s)	83, 96, 835
BspQI	GCTCTTC	1 cut(s)	313
BspT104I	TTCGAA	1 cut(s)	1109
BspT107I	GGYRCC	1 cut(s)	1192
BspTI	CTTAAG	1 cut(s)	239
BsrDI	GCAATG	1 cut(s)	1400
BsrGI	TGTACA	3 cut(s)	133, 278, 1331
BsrI	ACTGG	3 cut(s)	919, 1194, 1280
BssECI	CCNNGG	4 cut(s)	489, 542, 698, 1020
BssMI	GATC	4 cut(s)	88, 664, 731, 827
BssT1I	CCWWGG	2 cut(s)	542, 698
Bst2UI	CCWGG	2 cut(s)	371, 490
Bst4CI	ACNGT	4 cut(s)	283, 689, 1204, 1234
Bst6I	CTCTTC	3 cut(s)	313, 1115, 1139
BstAFI	CTTAAG	1 cut(s)	239
BstAUI	TGTACA	3 cut(s)	133, 278, 1331
BstBAI	YACGTR	2 cut(s)	878, 1307
BstBI	TTCGAA	1 cut(s)	1109
BstDEI	CTNAG	8 cut(s)	105, 504, 569, 627, 833, 1071, 1077, 1359
BstF5I	GGATG	7 cut(s)	44, 136, 379, 514, 565, 664, 1156
BstKTI	GATC	4 cut(s)	91, 667, 734, 830
BstMAI	GTCTC	3 cut(s)	541, 1027, 1388
BstMBI	GATC	4 cut(s)	88, 664, 731, 827
BstMCI	CGRYCG	1 cut(s)	1236
BstMWI	GCNNNNNNNGC	4 cut(s)	15, 153, 1025, 1067
BstNI	CCWGG	2 cut(s)	371, 490
BstSCI	CCNGG	3 cut(s)	369, 488, 882
BstSFI	CTRYAG	1 cut(s)	1288
BstSLI	GKGCMC	2 cut(s)	889, 1287
BstV1I	GCAGC	4 cut(s)	690, 1012, 1302, 1429
BstX2I	RGATCY	2 cut(s)	88, 827
BstYI	RGATCY	2 cut(s)	88, 827
Bsu36I	CCTNAGG	1 cut(s)	504
BsuRI	GGCC	3 cut(s)	223, 853, 887
BtrI	CACGTC	1 cut(s)	551
BtsCI	GGATG	7 cut(s)	44, 136, 379, 514, 565, 664, 1156
BtsI	GCAGTG	2 cut(s)	1183, 1387
BtsIMutI	CAGTG	5 cut(s)	1183, 1187, 1200, 1287, 1387
CciI	TCATGA	1 cut(s)	169
Cfr13I	GGNCC	5 cut(s)	851, 885, 886, 1220, 1322
CseI	GACGC	1 cut(s)	1423
Csp6I	GTAC	3 cut(s)	134, 279, 1332
CviAII	CATG	5 cut(s)	170, 327, 668, 713, 1226
CviQI	GTAC	3 cut(s)	134, 279, 1332
DdeI	CTNAG	8 cut(s)	105, 504, 569, 627, 833, 1071, 1077, 1359
DpnI	GATC	4 cut(s)	90, 666, 733, 829
DpnII	GATC	4 cut(s)	88, 664, 731, 827
DraI	TTTAAA	1 cut(s)	474
Eam1104I	CTCTTC	3 cut(s)	313, 1115, 1139
EarI	CTCTTC	3 cut(s)	313, 1115, 1139
Eco130I	CCWWGG	2 cut(s)	542, 698
Eco24I	GRGCYC	1 cut(s)	889
Eco32I	GATATC	1 cut(s)	907
Eco47I	GGWCC	2 cut(s)	1220, 1322
Eco57I	CTGAAG	3 cut(s)	875, 1014, 1157
Eco72I	CACGTG	1 cut(s)	1307
Eco81I	CCTNAGG	1 cut(s)	504
EcoO109I	RGGNCCY	1 cut(s)	886
EcoRII	CCWGG	2 cut(s)	369, 488
EcoRV	GATATC	1 cut(s)	907
EcoT14I	CCWWGG	2 cut(s)	542, 698
EcoT22I	ATGCAT	2 cut(s)	44, 1342
EcoT38I	GRGCYC	1 cut(s)	889
ErhI	CCWWGG	2 cut(s)	542, 698
Esp3I	CGTCTC	2 cut(s)	541, 1027
FaeI	CATG	5 cut(s)	173, 330, 671, 716, 1229
FalI	AAGNNNNNCTT	4 cut(s)	141, 173, 177, 209
FaqI	GGGAC	1 cut(s)	579
FatI	CATG	5 cut(s)	169, 326, 667, 712, 1225
FbaI	TGATCA	1 cut(s)	664
Fnu4HI	GCNGC	5 cut(s)	704, 854, 1026, 1291, 1418
FokI	GGATG	7 cut(s)	51, 123, 386, 521, 572, 671, 1163
FriOI	GRGCYC	1 cut(s)	889
Fsp4HI	GCNGC	5 cut(s)	704, 854, 1026, 1291, 1418
FspBI	CTAG	4 cut(s)	291, 543, 969, 1062
GluI	GCNGC	5 cut(s)	704, 854, 1026, 1291, 1418
GsuI	CTGGAG	2 cut(s)	54, 353
HaeIII	GGCC	3 cut(s)	223, 853, 887
HapII	CCGG	1 cut(s)	883
HgaI	GACGC	1 cut(s)	1423
Hin1II	CATG	5 cut(s)	173, 330, 671, 716, 1229
HincII	GTYRAC	1 cut(s)	937
HindII	GTYRAC	1 cut(s)	937
HindIII	AAGCTT	3 cut(s)	7, 236, 242
HinfI	GANTC	7 cut(s)	166, 287, 446, 538, 603, 1106, 1355
HpaI	GTTAAC	1 cut(s)	937
HpaII	CCGG	1 cut(s)	883
HphI	GGTGA	3 cut(s)	524, 674, 686
Hpy166II	GTNNAC	5 cut(s)	279, 515, 839, 864, 937
Hpy188III	TCNNGA	8 cut(s)	21, 170, 503, 729, 845, 969, 1103, 1352
Hpy8I	GTNNAC	5 cut(s)	279, 515, 839, 864, 937
HpyAV	CCTTC	5 cut(s)	342, 394, 842, 899, 973
HpyCH4III	ACNGT	4 cut(s)	283, 689, 1204, 1234
HpyCH4IV	ACGT	4 cut(s)	550, 877, 1036, 1306
HpyCH4V	TGCA	7 cut(s)	42, 944, 1028, 1290, 1340, 1380, 1405
HpyF10VI	GCNNNNNNNGC	4 cut(s)	15, 153, 1025, 1067
HpyF3I	CTNAG	8 cut(s)	105, 504, 569, 627, 833, 1071, 1077, 1359
HpySE526I	ACGT	4 cut(s)	550, 877, 1036, 1306
Hsp92II	CATG	5 cut(s)	173, 330, 671, 716, 1229
Ksp22I	TGATCA	1 cut(s)	664
KspAI	GTTAAC	1 cut(s)	937
Kzo9I	GATC	4 cut(s)	88, 664, 731, 827
LguI	GCTCTTC	1 cut(s)	313
LmnI	GCTCC	1 cut(s)	1374
Lsp1109I	GCAGC	4 cut(s)	690, 1012, 1302, 1429
LweI	GCATC	2 cut(s)	29, 804
MaeI	CTAG	4 cut(s)	291, 543, 969, 1062
MaeII	ACGT	4 cut(s)	550, 877, 1036, 1306
MaeIII	GTNAC	6 cut(s)	253, 581, 878, 1158, 1183, 1237
MalI	GATC	4 cut(s)	90, 666, 733, 829
MboI	GATC	4 cut(s)	88, 664, 731, 827
MflI	RGATCY	2 cut(s)	88, 827
MhlI	GDGCHC	2 cut(s)	889, 1287
MluCI	AATT	9 cut(s)	129, 230, 440, 483, 597, 692, 1154, 1327, 1425
MlyI	GAGTC	1 cut(s)	440
Mph1103I	ATGCAT	2 cut(s)	44, 1342
MroXI	GAANNNNTTC	2 cut(s)	498, 1271
MseI	TTAA	6 cut(s)	233, 240, 420, 473, 911, 936
MslI	CAYNNNNRTG	1 cut(s)	672
MspCI	CTTAAG	1 cut(s)	239
MspI	CCGG	1 cut(s)	883
MspR9I	CCNGG	3 cut(s)	371, 490, 884
MvaI	CCWGG	2 cut(s)	371, 490
MwoI	GCNNNNNNNGC	4 cut(s)	15, 153, 1025, 1067
NciI	CCSGG	1 cut(s)	884
NdeII	GATC	4 cut(s)	88, 664, 731, 827
NlaIII	CATG	5 cut(s)	173, 330, 671, 716, 1229
NlaIV	GGNNCC	3 cut(s)	90, 887, 1194
NmeAIII	GCCGAG	1 cut(s)	1045
NmuCI	GTSAC	2 cut(s)	1158, 1183
NsiI	ATGCAT	2 cut(s)	44, 1342
NspV	TTCGAA	1 cut(s)	1109
PagI	TCATGA	1 cut(s)	169
PciSI	GCTCTTC	1 cut(s)	313
PdmI	GAANNNNTTC	2 cut(s)	498, 1271
PfeI	GAWTC	6 cut(s)	166, 287, 538, 603, 1106, 1355
PfoI	TCCNGGA	1 cut(s)	369
PkrI	GCNGC	5 cut(s)	705, 855, 1027, 1292, 1419
PleI	GAGTC	1 cut(s)	440
PmaCI	CACGTG	1 cut(s)	1307
PmlI	CACGTG	1 cut(s)	1307
PpsI	GAGTC	1 cut(s)	440
Ppu21I	YACGTR	2 cut(s)	878, 1307
Psp6I	CCWGG	2 cut(s)	369, 488
PspCI	CACGTG	1 cut(s)	1307
PspGI	CCWGG	2 cut(s)	369, 488
PspN4I	GGNNCC	3 cut(s)	90, 887, 1194
PspOMI	GGGCCC	1 cut(s)	885
PspPI	GGNCC	5 cut(s)	851, 885, 886, 1220, 1322
PsrI	GAACNNNNNNTAC	2 cut(s)	1222, 1254
PstI	CTGCAG	1 cut(s)	1292
PsuI	RGATCY	2 cut(s)	88, 827
RsaI	GTAC	3 cut(s)	135, 280, 1333
RsaNI	GTAC	3 cut(s)	134, 279, 1332
RseI	CAYNNNNRTG	1 cut(s)	672
SapI	GCTCTTC	1 cut(s)	313
SaqAI	TTAA	6 cut(s)	233, 240, 420, 473, 911, 936
SatI	GCNGC	5 cut(s)	704, 854, 1026, 1291, 1418
Sau3AI	GATC	4 cut(s)	88, 664, 731, 827
Sau96I	GGNCC	5 cut(s)	851, 885, 886, 1220, 1322
SchI	GAGTC	1 cut(s)	440
ScrFI	CCNGG	3 cut(s)	371, 490, 884
SduI	GDGCHC	2 cut(s)	889, 1287
SfaNI	GCATC	2 cut(s)	29, 804
SfcI	CTRYAG	1 cut(s)	1288
SfuI	TTCGAA	1 cut(s)	1109
SinI	GGWCC	2 cut(s)	1220, 1322
SmiMI	CAYNNNNRTG	1 cut(s)	672
SmlI	CTYRAG	1 cut(s)	239
SmoI	CTYRAG	1 cut(s)	239
Sse9I	AATT	9 cut(s)	129, 230, 440, 483, 597, 692, 1154, 1327, 1425
SsiI	CCGC	2 cut(s)	706, 854
SspI	AATATT	1 cut(s)	499
SspMI	CTAG	4 cut(s)	291, 543, 969, 1062
StyD4I	CCNGG	3 cut(s)	369, 488, 882
StyI	CCWWGG	2 cut(s)	542, 698
TaaI	ACNGT	4 cut(s)	283, 689, 1204, 1234
TaiI	ACGT	4 cut(s)	553, 880, 1039, 1309
TaqI	TCGA	3 cut(s)	247, 601, 1109
TasI	AATT	9 cut(s)	129, 230, 440, 483, 597, 692, 1154, 1327, 1425
TatI	WGTACW	3 cut(s)	133, 278, 1331
TauI	GCSGC	1 cut(s)	856
TfiI	GAWTC	6 cut(s)	166, 287, 538, 603, 1106, 1355
Tru1I	TTAA	6 cut(s)	233, 240, 420, 473, 911, 936
Tru9I	TTAA	6 cut(s)	233, 240, 420, 473, 911, 936
TscAI	CASTG	5 cut(s)	1183, 1194, 1207, 1287, 1394
TseFI	GTSAC	2 cut(s)	1158, 1183
TseI	GCWGC	4 cut(s)	703, 1025, 1290, 1417
Tsp45I	GTSAC	2 cut(s)	1158, 1183
TspDTI	ATGAA	3 cut(s)	334, 807, 1167
TspGWI	ACGGA	2 cut(s)	439, 1422
TspRI	CASTG	5 cut(s)	1183, 1194, 1207, 1287, 1394
Vha464I	CTTAAG	1 cut(s)	239
VpaK11BI	GGWCC	2 cut(s)	1220, 1322
XapI	RAATTY	3 cut(s)	440, 483, 597
XbaI	TCTAGA	1 cut(s)	968
XmaJI	CCTAGG	1 cut(s)	542
XmnI	GAANNNNTTC	2 cut(s)	498, 1271
XspI	CTAG	4 cut(s)	291, 543, 969, 1062
Zsp2I	ATGCAT	2 cut(s)	44, 1342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.