Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0005591

Physical Location & Seq

Genomic Coordinates Reverse (-)

52832747 .. 52836215

Gene Structure 3469 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG273400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1440 bp

ATGGAAAGCTTTGGTGGCTCTGGATTTTCTGCTGGAGGATGCATTGTGAGGAAGAAAAGGAGTGTTGTATCGCATAAACCTCGCTTGGATCCACTCACATTTTCTGAGAGGTCTAATATCTTGCTACGAATTGTACATCCCTTTGGCAAAGAAAGCCTTGATAAGAATCATGATAGTAAGGAGAAAGGAGTGCATTCTGATGGACTGCGAAGTGAGAAAAGGCCGAAGAAATTAAAGCTTAAGCTTCGAGGTGTTACTCATACAATCCAAACCAAGTGTACAGTTGATTCTAGTCTTGGTGGTGGCTCTTCCATACCTAAATCCTCATGCCCTTCCGATGACTTCATACCCCAACCGAAGCCACTTCTCCAGGATGGCAAACCCTTCTGTTCTTCTGATGGAGGCAAAGGCATTGGAGTTAAACGGAAATACTCCTTGAAAATTGACTCTACTTTGAGAAAGGAGTATTCTTTGAAAGGTAAAATCTCCAGGGAAAGTTTTCCTGAGGATGGTGAACCAGCTCGTAAGAGCAAGAGGATTCCTAGGAGACGTGTCTTGGATGTGGGACTTAGTGAAGATGGTAATGAAGATGGTGAAATTCGATTCCTTGAAAGACTAAATGCTTCTAAGGTTGCTCTTTCAAAGAGCAATCAAATGGATGGCGATCATGGAGGTGATATTGGAAACTGTAAATTACCAAGGCTGCGGAAACATGGTGGAATAAAGTCAAGATCAGAAAAAATGTACAAGGATAAAGACTATTTGGGAGAAGAAGAAGAACTGACATCTGATGATGAACTTCAATCTAATGGGAAGACACTGAAAAGGGGATCTCTTAGTTTACTTCTGGAAGGGCAGCAAAAGTCCACACCCACGACACGTAACCGGGCCCTTCAGGCTGGGATAGATATCTTAACTGGTTCTGGTTCAAGCTTTGTTAACCCTGCAAATCTATTGCTTCCTGCCCCATCTAGAAAAAAGAAGGAGAAAATCTCTGAAGTGGATAAGCAATCAAAGAAAGCCGAGGCTGCACAGAGACGTAAAATACAAACAGAGAAGATAGCTAGAGAAGCTGAGGCTGAGGCAATCAGAAAGATACTTGGTCAAGATTCGAAGAAGAAGAAGAGGGAAGAAGAACTGAAGCAGAAGAGGGATGAATTGTCACAGGGGAGGAATGGCAGTGCTGTCACACTGGCACCAAACACTGTCCGATGGGTCAATGGTCCTAATGGAACGGTCGTTACATTCTCTGATGATATTGGTCTGCCGAACATTTTCAGTCCAGTGCCCTGCAGCTACCCTCCCCCACGTGAAAAATGTGCTGGTCCAAATTGTACAAATGCATACAAGTATCGGGATTCTAAGTCCAAGCTCCCCCTTTGCAGTCTCCACTGCTACAGGGCATTGCACGGAAAGACGCAGCCTCTAATTGCTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PAPA-1 zf-HIT

Protein Analysis

479

Amino Acids

52.82

Weight (kDa)

9.73

Isoelectric Point (pI)

52.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAPA-1	PF04795	336 - 419	4.4e-19	PAPA-1-like conserved region
zf-HIT	PF04438	436 - 467	2.1e-06	HIT zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005591)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06660
fragaria_vesca	FvH4_4g19561 FvH4_4g19561 FvH4_4g19561 FvH4_4g19561 FvH4_4g19561
malus_domestica	MD13G1155600.v1.1 MD16G1155300.v1.1
prunus_persica	Prupe.1G118900_v2.0.a1 Prupe.1G118900_v2.0.a1 Prupe.1G118900_v2.0.a1 Prupe.1G118900_v2.0.a1 Prupe.1G118900_v2.0.a1 Prupe.1G118900_v2.0.a1 Prupe.1G118900_v2.0.a1
pyrus_communis	pycom13g13260
rosa_chinensis	RchiOBHm_Chr4g0424821
rosa_laevigata	RLG00000007419
rosa_multiflora	Rmu_sc0003608.1_g000022 Rmu_sc0007418.1_g000001
rosa_roxburghii	Rroxscaffold_5G00367040
rosa_rugosa	Rorug04G0199300
rosa_samantha	Rh4AG257100 Rh4BG262400 Rh4CG273400 Rh4DG258200
rosa_wichuraiana	Rw4G022180 Rw4G024040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1195
AciI	CCGC	1 cut(s)	706
AclWI	GGATC	3 cut(s)	83, 96, 838
AcsI	RAATTY	1 cut(s)	597
AcuI	CTGAAG	3 cut(s)	878, 1017, 1160
AcvI	CACGTG	1 cut(s)	1310
AfaI	GTAC	4 cut(s)	135, 280, 746, 1336
AfiI	CCNNNNNNNGG	1 cut(s)	509
AflII	CTTAAG	1 cut(s)	239
AflIII	ACRYGT	2 cut(s)	550, 878
AgsI	TTSAA	6 cut(s)	439, 475, 611, 642, 803, 930
AjiI	CACGTC	1 cut(s)	551
AjnI	CCWGG	2 cut(s)	369, 488
AluBI	AGCT	9 cut(s)	9, 238, 244, 521, 933, 1064, 1073, 1296, 1372
AluI	AGCT	9 cut(s)	9, 238, 244, 521, 933, 1064, 1073, 1296, 1372
Alw26I	GTCTC	3 cut(s)	541, 1030, 1391
AlwI	GGATC	3 cut(s)	83, 96, 838
AoxI	GGCC	2 cut(s)	221, 888
ApaI	GGGCCC	1 cut(s)	892
ApeKI	GCWGC	5 cut(s)	703, 856, 1028, 1293, 1420
ApoI	RAATTY	1 cut(s)	597
Asp700I	GAANNNNTTC	2 cut(s)	498, 1274
AspA2I	CCTAGG	1 cut(s)	542
AspS9I	GGNCC	4 cut(s)	888, 889, 1223, 1325
AsuC2I	CCSGG	1 cut(s)	887
AsuHPI	GGTGA	3 cut(s)	524, 605, 686
AsuII	TTCGAA	1 cut(s)	1112
AvaII	GGWCC	2 cut(s)	1223, 1325
AvrII	CCTAGG	1 cut(s)	542
AxyI	CCTNAGG	1 cut(s)	504
BaeGI	GKGCMC	2 cut(s)	892, 1290
BamHI	GGATCC	1 cut(s)	88
BanI	GGYRCC	1 cut(s)	1195
BanII	GRGCYC	1 cut(s)	892
BbrPI	CACGTG	1 cut(s)	1310
BbsI	GAAGAC	1 cut(s)	821
BbvCI	CCTCAGC	2 cut(s)	1074, 1080
BbvI	GCAGC	5 cut(s)	690, 868, 1015, 1305, 1432
BccI	CCATC	9 cut(s)	194, 368, 392, 503, 572, 584, 653, 976, 1206
BcgI	CGANNNNNNTGC	2 cut(s)	62, 96
BciT130I	CCWGG	2 cut(s)	371, 490
BcnI	CCSGG	1 cut(s)	887
BcoDI	GTCTC	3 cut(s)	541, 1030, 1391
BfaI	CTAG	4 cut(s)	291, 543, 972, 1065
BfmI	CTRYAG	2 cut(s)	1291, 1396
BfrI	CTTAAG	1 cut(s)	239
BglI	GCCNNNNNGGC	1 cut(s)	896
BisI	GCNGC	5 cut(s)	704, 857, 1029, 1294, 1421
BlnI	CCTAGG	1 cut(s)	542
BlsI	GCNGC	5 cut(s)	705, 858, 1030, 1295, 1422
Bme1390I	CCNGG	3 cut(s)	371, 490, 887
Bme18I	GGWCC	2 cut(s)	1223, 1325
BmgBI	CACGTC	1 cut(s)	551
BmgT120I	GGNCC	4 cut(s)	888, 889, 1223, 1325
BmiI	GGNNCC	3 cut(s)	90, 890, 1197
BmrFI	CCNGG	3 cut(s)	371, 490, 887
BmsI	GCATC	1 cut(s)	29
BpiI	GAAGAC	1 cut(s)	821
BplI	GAGNNNNNCTC	2 cut(s)	977, 1009
BpmI	CTGGAG	3 cut(s)	54, 353, 472
Bpu10I	CCTNAGC	2 cut(s)	1074, 1080
Bpu14I	TTCGAA	1 cut(s)	1112
BpuMI	CCSGG	1 cut(s)	887
BsaAI	YACGTR	2 cut(s)	881, 1310
BsaBI	GATNNNNATC	3 cut(s)	165, 663, 908
BsaJI	CCNNGG	4 cut(s)	489, 542, 698, 1023
Bsc4I	CCNNNNNNNGG	1 cut(s)	509
Bse1I	ACTGG	3 cut(s)	922, 1197, 1283
Bse21I	CCTNAGG	1 cut(s)	504
Bse3DI	GCAATG	1 cut(s)	1403
Bse8I	GATNNNNATC	3 cut(s)	165, 663, 908
BseBI	CCWGG	2 cut(s)	371, 490
BseDI	CCNNGG	4 cut(s)	489, 542, 698, 1023
BseGI	GGATG	7 cut(s)	44, 136, 379, 514, 565, 664, 1159
BseJI	GATNNNNATC	3 cut(s)	165, 663, 908
BseLI	CCNNNNNNNGG	1 cut(s)	509
BseMI	GCAATG	1 cut(s)	1403
BseMII	CTCAG	4 cut(s)	96, 495, 1065, 1071
BseNI	ACTGG	3 cut(s)	922, 1197, 1283
BseSI	GKGCMC	2 cut(s)	892, 1290
BseXI	GCAGC	5 cut(s)	690, 868, 1015, 1305, 1432
BseYI	CCCAGC	1 cut(s)	899
BsgI	GTGCAG	1 cut(s)	1014
Bsh1285I	CGRYCG	1 cut(s)	1239
BshFI	GGCC	2 cut(s)	223, 890
BshNI	GGYRCC	1 cut(s)	1195
BsiEI	CGRYCG	1 cut(s)	1239
BsiSI	CCGG	1 cut(s)	886
BslFI	GGGAC	1 cut(s)	579
BslI	CCNNNNNNNGG	1 cut(s)	509
BsmAI	GTCTC	3 cut(s)	541, 1030, 1391
BsmBI	CGTCTC	2 cut(s)	541, 1030
BsmFI	GGGAC	1 cut(s)	579
BsmI	GAATGC	1 cut(s)	193
BsnI	GGCC	2 cut(s)	223, 890
Bsp119I	TTCGAA	1 cut(s)	1112
Bsp120I	GGGCCC	1 cut(s)	888
Bsp1286I	GDGCHC	2 cut(s)	892, 1290
Bsp1407I	TGTACA	4 cut(s)	133, 278, 744, 1334
Bsp143I	GATC	4 cut(s)	88, 664, 731, 830
BspACI	CCGC	1 cut(s)	706
BspANI	GGCC	2 cut(s)	223, 890
BspCNI	CTCAG	4 cut(s)	97, 496, 1066, 1072
BspHI	TCATGA	1 cut(s)	169
BspLI	GGNNCC	3 cut(s)	90, 890, 1197
BspMAI	CTGCAG	1 cut(s)	1295
BspPI	GGATC	3 cut(s)	83, 96, 838
BspQI	GCTCTTC	1 cut(s)	313
BspT104I	TTCGAA	1 cut(s)	1112
BspT107I	GGYRCC	1 cut(s)	1195
BspTI	CTTAAG	1 cut(s)	239
BsrDI	GCAATG	1 cut(s)	1403
BsrGI	TGTACA	4 cut(s)	133, 278, 744, 1334
BsrI	ACTGG	3 cut(s)	922, 1197, 1283
BssECI	CCNNGG	4 cut(s)	489, 542, 698, 1023
BssMI	GATC	4 cut(s)	88, 664, 731, 830
BssT1I	CCWWGG	2 cut(s)	542, 698
Bst2UI	CCWGG	2 cut(s)	371, 490
Bst4CI	ACNGT	4 cut(s)	283, 689, 1207, 1237
Bst6I	CTCTTC	3 cut(s)	313, 1118, 1142
BstAFI	CTTAAG	1 cut(s)	239
BstAUI	TGTACA	4 cut(s)	133, 278, 744, 1334
BstBAI	YACGTR	2 cut(s)	881, 1310
BstBI	TTCGAA	1 cut(s)	1112
BstDEI	CTNAG	8 cut(s)	105, 504, 569, 627, 836, 1074, 1080, 1362
BstF5I	GGATG	7 cut(s)	44, 136, 379, 514, 565, 664, 1159
BstKTI	GATC	4 cut(s)	91, 667, 734, 833
BstMAI	GTCTC	3 cut(s)	541, 1030, 1391
BstMBI	GATC	4 cut(s)	88, 664, 731, 830
BstMCI	CGRYCG	1 cut(s)	1239
BstMWI	GCNNNNNNNGC	5 cut(s)	15, 153, 896, 1028, 1070
BstNI	CCWGG	2 cut(s)	371, 490
BstSCI	CCNGG	3 cut(s)	369, 488, 885
BstSFI	CTRYAG	2 cut(s)	1291, 1396
BstSLI	GKGCMC	2 cut(s)	892, 1290
BstV1I	GCAGC	5 cut(s)	690, 868, 1015, 1305, 1432
BstV2I	GAAGAC	1 cut(s)	821
BstX2I	RGATCY	2 cut(s)	88, 830
BstYI	RGATCY	2 cut(s)	88, 830
Bsu36I	CCTNAGG	1 cut(s)	504
BsuRI	GGCC	2 cut(s)	223, 890
BtrI	CACGTC	1 cut(s)	551
BtsCI	GGATG	7 cut(s)	44, 136, 379, 514, 565, 664, 1159
BtsI	GCAGTG	2 cut(s)	1186, 1390
BtsIMutI	CAGTG	6 cut(s)	818, 1186, 1190, 1203, 1290, 1390
CciI	TCATGA	1 cut(s)	169
Cfr13I	GGNCC	4 cut(s)	888, 889, 1223, 1325
CseI	GACGC	1 cut(s)	1426
Csp6I	GTAC	4 cut(s)	134, 279, 745, 1335
CviAII	CATG	4 cut(s)	170, 327, 668, 713
CviQI	GTAC	4 cut(s)	134, 279, 745, 1335
DdeI	CTNAG	8 cut(s)	105, 504, 569, 627, 836, 1074, 1080, 1362
DpnI	GATC	4 cut(s)	90, 666, 733, 832
DpnII	GATC	4 cut(s)	88, 664, 731, 830
Eam1104I	CTCTTC	3 cut(s)	313, 1118, 1142
EarI	CTCTTC	3 cut(s)	313, 1118, 1142
Eco130I	CCWWGG	2 cut(s)	542, 698
Eco24I	GRGCYC	1 cut(s)	892
Eco32I	GATATC	1 cut(s)	910
Eco47I	GGWCC	2 cut(s)	1223, 1325
Eco57I	CTGAAG	3 cut(s)	878, 1017, 1160
Eco72I	CACGTG	1 cut(s)	1310
Eco81I	CCTNAGG	1 cut(s)	504
EcoO109I	RGGNCCY	1 cut(s)	889
EcoRII	CCWGG	2 cut(s)	369, 488
EcoRV	GATATC	1 cut(s)	910
EcoT14I	CCWWGG	2 cut(s)	542, 698
EcoT22I	ATGCAT	2 cut(s)	44, 1345
EcoT38I	GRGCYC	1 cut(s)	892
ErhI	CCWWGG	2 cut(s)	542, 698
Esp3I	CGTCTC	2 cut(s)	541, 1030
FaeI	CATG	4 cut(s)	173, 330, 671, 716
FaiI	YATR	9 cut(s)	75, 171, 261, 314, 328, 347, 669, 714, 1345
FalI	AAGNNNNNCTT	2 cut(s)	141, 173
FaqI	GGGAC	1 cut(s)	579
FatI	CATG	4 cut(s)	169, 326, 667, 712
Fnu4HI	GCNGC	5 cut(s)	704, 857, 1029, 1294, 1421
FokI	GGATG	7 cut(s)	51, 123, 386, 521, 572, 671, 1166
FriOI	GRGCYC	1 cut(s)	892
Fsp4HI	GCNGC	5 cut(s)	704, 857, 1029, 1294, 1421
FspBI	CTAG	4 cut(s)	291, 543, 972, 1065
GluI	GCNGC	5 cut(s)	704, 857, 1029, 1294, 1421
GsaI	CCCAGC	1 cut(s)	903
GsuI	CTGGAG	3 cut(s)	54, 353, 472
HaeIII	GGCC	2 cut(s)	223, 890
HapII	CCGG	1 cut(s)	886
HgaI	GACGC	1 cut(s)	1426
Hin1II	CATG	4 cut(s)	173, 330, 671, 716
HincII	GTYRAC	1 cut(s)	940
HindII	GTYRAC	1 cut(s)	940
HindIII	AAGCTT	4 cut(s)	7, 236, 242, 931
HinfI	GANTC	7 cut(s)	166, 287, 446, 538, 603, 1109, 1358
HpaI	GTTAAC	1 cut(s)	940
HpaII	CCGG	1 cut(s)	886
HphI	GGTGA	3 cut(s)	524, 605, 686
Hpy166II	GTNNAC	5 cut(s)	279, 515, 842, 867, 940
Hpy188III	TCNNGA	8 cut(s)	21, 170, 503, 729, 848, 972, 1106, 1355
Hpy8I	GTNNAC	5 cut(s)	279, 515, 842, 867, 940
HpyAV	CCTTC	5 cut(s)	342, 394, 845, 902, 976
HpyCH4III	ACNGT	4 cut(s)	283, 689, 1207, 1237
HpyCH4IV	ACGT	4 cut(s)	550, 880, 1039, 1309
HpyCH4V	TGCA	8 cut(s)	42, 193, 947, 1031, 1293, 1343, 1383, 1408
HpyF10VI	GCNNNNNNNGC	5 cut(s)	15, 153, 896, 1028, 1070
HpyF3I	CTNAG	8 cut(s)	105, 504, 569, 627, 836, 1074, 1080, 1362
HpySE526I	ACGT	4 cut(s)	550, 880, 1039, 1309
Hsp92II	CATG	4 cut(s)	173, 330, 671, 716
KspAI	GTTAAC	1 cut(s)	940
Kzo9I	GATC	4 cut(s)	88, 664, 731, 830
LguI	GCTCTTC	1 cut(s)	313
LmnI	GCTCC	1 cut(s)	1377
Lsp1109I	GCAGC	5 cut(s)	690, 868, 1015, 1305, 1432
LweI	GCATC	1 cut(s)	29
MaeI	CTAG	4 cut(s)	291, 543, 972, 1065
MaeII	ACGT	4 cut(s)	550, 880, 1039, 1309
MaeIII	GTNAC	5 cut(s)	253, 881, 1161, 1186, 1240
MalI	GATC	4 cut(s)	90, 666, 733, 832
MboI	GATC	4 cut(s)	88, 664, 731, 830
MflI	RGATCY	2 cut(s)	88, 830
MhlI	GDGCHC	2 cut(s)	892, 1290
MluCI	AATT	8 cut(s)	129, 230, 441, 597, 692, 1157, 1330, 1428
MlyI	GAGTC	1 cut(s)	440
Mph1103I	ATGCAT	2 cut(s)	44, 1345
MroXI	GAANNNNTTC	2 cut(s)	498, 1274
MseI	TTAA	5 cut(s)	233, 240, 420, 914, 939
MslI	CAYNNNNRTG	2 cut(s)	198, 672
MspCI	CTTAAG	1 cut(s)	239
MspI	CCGG	1 cut(s)	886
MspR9I	CCNGG	3 cut(s)	371, 490, 887
Mva1269I	GAATGC	1 cut(s)	193
MvaI	CCWGG	2 cut(s)	371, 490
MwoI	GCNNNNNNNGC	5 cut(s)	15, 153, 896, 1028, 1070
NciI	CCSGG	1 cut(s)	887
NdeII	GATC	4 cut(s)	88, 664, 731, 830
NlaIII	CATG	4 cut(s)	173, 330, 671, 716
NlaIV	GGNNCC	3 cut(s)	90, 890, 1197
NmeAIII	GCCGAG	1 cut(s)	1048
NmuCI	GTSAC	2 cut(s)	1161, 1186
NsiI	ATGCAT	2 cut(s)	44, 1345
NspV	TTCGAA	1 cut(s)	1112
PagI	TCATGA	1 cut(s)	169
PciSI	GCTCTTC	1 cut(s)	313
PctI	GAATGC	1 cut(s)	193
PdmI	GAANNNNTTC	2 cut(s)	498, 1274
PfeI	GAWTC	6 cut(s)	166, 287, 538, 603, 1109, 1358
PfoI	TCCNGGA	1 cut(s)	369
PkrI	GCNGC	5 cut(s)	705, 858, 1030, 1295, 1422
PleI	GAGTC	1 cut(s)	440
PmaCI	CACGTG	1 cut(s)	1310
PmlI	CACGTG	1 cut(s)	1310
PpsI	GAGTC	1 cut(s)	440
Ppu21I	YACGTR	2 cut(s)	881, 1310
Psp6I	CCWGG	2 cut(s)	369, 488
PspCI	CACGTG	1 cut(s)	1310
PspFI	CCCAGC	1 cut(s)	899
PspGI	CCWGG	2 cut(s)	369, 488
PspN4I	GGNNCC	3 cut(s)	90, 890, 1197
PspOMI	GGGCCC	1 cut(s)	888
PspPI	GGNCC	4 cut(s)	888, 889, 1223, 1325
PsrI	GAACNNNNNNTAC	2 cut(s)	1225, 1257
PstI	CTGCAG	1 cut(s)	1295
PsuI	RGATCY	2 cut(s)	88, 830
RsaI	GTAC	4 cut(s)	135, 280, 746, 1336
RsaNI	GTAC	4 cut(s)	134, 279, 745, 1335
RseI	CAYNNNNRTG	2 cut(s)	198, 672
SapI	GCTCTTC	1 cut(s)	313
SaqAI	TTAA	5 cut(s)	233, 240, 420, 914, 939
SatI	GCNGC	5 cut(s)	704, 857, 1029, 1294, 1421
Sau3AI	GATC	4 cut(s)	88, 664, 731, 830
Sau96I	GGNCC	4 cut(s)	888, 889, 1223, 1325
SchI	GAGTC	1 cut(s)	440
ScrFI	CCNGG	3 cut(s)	371, 490, 887
SduI	GDGCHC	2 cut(s)	892, 1290
SfaNI	GCATC	1 cut(s)	29
SfcI	CTRYAG	2 cut(s)	1291, 1396
SfuI	TTCGAA	1 cut(s)	1112
SinI	GGWCC	2 cut(s)	1223, 1325
SmiMI	CAYNNNNRTG	2 cut(s)	198, 672
SmlI	CTYRAG	1 cut(s)	239
SmoI	CTYRAG	1 cut(s)	239
Sse9I	AATT	8 cut(s)	129, 230, 441, 597, 692, 1157, 1330, 1428
SsiI	CCGC	1 cut(s)	706
SspMI	CTAG	4 cut(s)	291, 543, 972, 1065
StyD4I	CCNGG	3 cut(s)	369, 488, 885
StyI	CCWWGG	2 cut(s)	542, 698
TaaI	ACNGT	4 cut(s)	283, 689, 1207, 1237
TaiI	ACGT	4 cut(s)	553, 883, 1042, 1312
TaqI	TCGA	3 cut(s)	247, 601, 1112
TasI	AATT	8 cut(s)	129, 230, 441, 597, 692, 1157, 1330, 1428
TatI	WGTACW	4 cut(s)	133, 278, 744, 1334
TfiI	GAWTC	6 cut(s)	166, 287, 538, 603, 1109, 1358
Tru1I	TTAA	5 cut(s)	233, 240, 420, 914, 939
Tru9I	TTAA	5 cut(s)	233, 240, 420, 914, 939
TscAI	CASTG	6 cut(s)	825, 1186, 1197, 1210, 1290, 1397
TseFI	GTSAC	2 cut(s)	1161, 1186
TseI	GCWGC	5 cut(s)	703, 856, 1028, 1293, 1420
Tsp45I	GTSAC	2 cut(s)	1161, 1186
TspDTI	ATGAA	4 cut(s)	334, 600, 810, 1170
TspGWI	ACGGA	2 cut(s)	439, 1425
TspRI	CASTG	6 cut(s)	825, 1186, 1197, 1210, 1290, 1397
Vha464I	CTTAAG	1 cut(s)	239
VpaK11BI	GGWCC	2 cut(s)	1223, 1325
XapI	RAATTY	1 cut(s)	597
XbaI	TCTAGA	1 cut(s)	971
XmaJI	CCTAGG	1 cut(s)	542
XmnI	GAANNNNTTC	2 cut(s)	498, 1274
XspI	CTAG	4 cut(s)	291, 543, 972, 1065
Zsp2I	ATGCAT	2 cut(s)	44, 1345

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.