Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0012427

Physical Location & Seq

Genomic Coordinates Forward (+)

17563532 .. 17566714

Gene Structure 3183 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007495

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1437 bp

ATGTTTGTTTCAGGGAAGAGTGAAATGCAAGTCTGCTGCATTGTAGACTCTACGGTGAAAACAAACATCACTGCAGATGAAGAGTTTCTCCCTCGCCAGAATGGAGATCTTTCAATCATGTATGATGTGACCCGGACGTATGGATCAAGTTACTTTGCACAAGTGACAATCTCCAACCACAACTCTCTAGGCCGTCTTGATAGTTGGAAGTTGAGCTGGGACTGGATGGCACAAGAGTTTATCAATACGATGAGAGGGGCTTATCCATCTGTCGTTGATTCTTCTGAATGCATATTTGGCGAACAAGGTCAATACTACGCGGATCTAGACTTTGCCAATGTCTTGAGTTGTGAAAAAAGGCCAACCATTATTGACCTGCCTCTGGAAAAGACTAACGACACTAAACTTGGTATGATCCCTTATTGTTGCCGAAATGGTACTATCTTGCCAACAACAATGGATGCAACCAAGTCCAAATCTTCATTCCAGATGGAAGTCTATAAAATGCCTCCAAATATCAACCGCTCTGTGATCATACCACCACAAAACTGGGCAATCAATGGCACTCTCAACCCTGATTACAAATGTGGTCCTCCTGTGCGGGTGAGTCCTAGTCAATTCCCTGATGCAAGTGGCTTACCGGTGAATTCAACTGCAGTAGCTAGCTGGCAGGTTGTGTGCAATATTACACAGGCCAAGGGAGCAAGCCCTAGATGCTGTGTTTCATTTTCTGCTTACTTCAACGAGTCTGTTGTACCATGCAAAACTTGTGCGTGTGGGTGCCCTAGTAATACAGCTCAAACTTGTAGCACAACTGCACCGGCTATGCTTCTTCCACCAGAGTCGCTTCTCGTTCCCTTTGAGAACCGAACTGTCAAGGCAAAAGCTTGGGCTGAGCTTAAACACCTAGCAGATCCGAACCCAATGCCCTGTGGTGATAACTGTGGGGTCAGCATAAACTGGCACGTACTCTCAGACTACAGTAAAGGATGGACTGCAAGGGTTACACTCTTCAACTGGGGCGAAACTTCTTTTGCTGATTGGTTTACTGCAGTACAACTGGATAAAGCTGTTCCTGGTTTCGAAAAAATGTACTCTTTCAACGCTACTACTGTGGGAACGGATGGGGTCAACAATACGGTGTTTATGCAGGGTTTGGAAGGATTGAACTACCTTGTGGCAGAAGTAGATGGAGCCAACCCAAAGAAGGATCCTAGGGTGCCTGGGAAGCAGCAATCAGTGATCTCATTTACAAAGAAGCTTACTCCTGGCATTAATGTGGCTGGTAGAGATGGGTTTCCGACAAAAGTGTTCTTTAATGGGGAGGAGTGCTCACTTCCTGATATATACCCAAGTAGTGCCTACAGAACAAGCTCAGCCATGATGATGTTTCCTGTCCTCCTAATGGTTGCACTGTTCATGTTGATGCAGCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0007275 GO:0008150 GO:0009506 GO:0009653 GO:0009826 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0021700 GO:0022622 GO:0030054 GO:0030154 GO:0031224 GO:0031225 GO:0031226 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046658 GO:0048364 GO:0048468 GO:0048469 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0055044 GO:0060560 GO:0071695 GO:0071840 GO:0071944 GO:0090558 GO:0090627 GO:0097708 GO:0098791 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COBRA

Protein Analysis

479

Amino Acids

52.59

Weight (kDa)

5.44

Isoelectric Point (pI)

35.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COBRA	PF04833	51 - 230	6e-65	COBRA-like protein
COB_C	PF25079	238 - 451	6.2e-101	COBRA family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012427)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16120
fragaria_vesca	FvH4_4g19240
malus_domestica	MD13G1159600.v1.1 MD16G1159300.v1.1
prunus_persica	Prupe.1G126300_v2.0.a1
pyrus_communis	pycom13g13600 pycom16g13430
rosa_chinensis	RchiOBHm_Chr4g0424221
rosa_laevigata	RLG00000007495
rosa_multiflora	Rmu_sc0000980.1_g000001 Rmu_sc0002260.1_g000034 Rmu_sc0019001.1_g000001
rosa_roxburghii	Rroxscaffold_5G00366170
rosa_rugosa	Rorug04G0194400
rosa_samantha	Rh4AG251800 Rh4BG257100 Rh4CG267700 Rh4DG251500
rosa_wichuraiana	Rw4G021710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	384, 661
AccB1I	GGYRCC	2 cut(s)	780, 1219
AccBSI	CCGCTC	1 cut(s)	525
AccI	GTMKAC	1 cut(s)	45
AccII	CGCG	1 cut(s)	320
AciI	CCGC	3 cut(s)	320, 523, 601
AclWI	GGATC	6 cut(s)	151, 330, 409, 908, 1205, 1218
AcsI	RAATTY	1 cut(s)	646
AfaI	GTAC	5 cut(s)	439, 756, 969, 1056, 1094
AfiI	CCNNNNNNNGG	3 cut(s)	382, 1207, 1405
AgeI	ACCGGT	1 cut(s)	640
AgsI	TTSAA	6 cut(s)	114, 651, 742, 1015, 1102, 1168
AjnI	CCWGG	3 cut(s)	1075, 1222, 1267
AjuI	GAANNNNNNNTTGG	4 cut(s)	279, 311, 467, 499
AluBI	AGCT	9 cut(s)	216, 662, 666, 797, 887, 898, 1070, 1261, 1374
AluI	AGCT	9 cut(s)	216, 662, 666, 797, 887, 898, 1070, 1261, 1374
Alw21I	GWGCWC	1 cut(s)	1334
AlwI	GGATC	6 cut(s)	151, 330, 409, 908, 1205, 1218
AoxI	GGCC	3 cut(s)	190, 359, 693
ApeKI	GCWGC	3 cut(s)	36, 1231, 1429
ApoI	RAATTY	1 cut(s)	646
AseI	ATTAAT	1 cut(s)	1275
AsiGI	ACCGGT	1 cut(s)	640
Asp700I	GAANNNNTTC	1 cut(s)	84
AspA2I	CCTAGG	1 cut(s)	1214
AspS9I	GGNCC	1 cut(s)	590
AsuC2I	CCSGG	1 cut(s)	133
AsuHPI	GGTGA	4 cut(s)	67, 616, 655, 947
AsuII	TTCGAA	1 cut(s)	1083
AsuNHI	GCTAGC	1 cut(s)	662
AvaII	GGWCC	1 cut(s)	590
AvrII	CCTAGG	1 cut(s)	1214
BaeGI	GKGCMC	1 cut(s)	785
BamHI	GGATCC	1 cut(s)	1210
BanI	GGYRCC	2 cut(s)	780, 1219
Bbv12I	GWGCWC	1 cut(s)	1334
BbvI	GCAGC	2 cut(s)	23, 1243
BccI	CCATC	7 cut(s)	220, 274, 484, 984, 1118, 1184, 1286
BceAI	ACGGC	1 cut(s)	177
BcgI	CGANNNNNNTGC	2 cut(s)	907, 941
BciT130I	CCWGG	3 cut(s)	1077, 1224, 1269
BclI	TGATCA	1 cut(s)	531
BcnI	CCSGG	1 cut(s)	133
BfaI	CTAG	8 cut(s)	188, 326, 612, 663, 711, 786, 908, 1215
BfmI	CTRYAG	5 cut(s)	72, 654, 979, 1050, 1363
BfuAI	ACCTGC	2 cut(s)	384, 661
BglII	AGATCT	1 cut(s)	106
BisI	GCNGC	3 cut(s)	37, 1232, 1430
BlnI	CCTAGG	1 cut(s)	1214
BlpI	GCTNAGC	2 cut(s)	894, 1375
BlsI	GCNGC	3 cut(s)	38, 1233, 1431
Bme1390I	CCNGG	4 cut(s)	133, 1077, 1224, 1269
Bme18I	GGWCC	1 cut(s)	590
BmgT120I	GGNCC	1 cut(s)	590
BmiI	GGNNCC	4 cut(s)	782, 1195, 1212, 1221
BmrFI	CCNGG	4 cut(s)	133, 1077, 1224, 1269
BmrI	ACTGGG	2 cut(s)	559, 1027
BmsI	GCATC	4 cut(s)	451, 616, 704, 1416
BmtI	GCTAGC	1 cut(s)	666
BmuI	ACTGGG	2 cut(s)	559, 1027
BplI	GAGNNNNNCTC	2 cut(s)	1316, 1348
Bpu1102I	GCTNAGC	2 cut(s)	894, 1375
Bpu14I	TTCGAA	1 cut(s)	1083
BpuEI	CTTGAG	1 cut(s)	364
BpuMI	CCSGG	1 cut(s)	133
BsaAI	YACGTR	1 cut(s)	967
BsaJI	CCNNGG	3 cut(s)	696, 1214, 1223
BsaWI	WCCGGW	1 cut(s)	640
Bsc4I	CCNNNNNNNGG	3 cut(s)	382, 1207, 1405
Bse118I	RCCGGY	2 cut(s)	640, 820
Bse1I	ACTGG	5 cut(s)	227, 554, 965, 1022, 1065
BseBI	CCWGG	3 cut(s)	1077, 1224, 1269
BseDI	CCNNGG	3 cut(s)	696, 1214, 1223
BseGI	GGATG	4 cut(s)	231, 466, 995, 1129
BseLI	CCNNNNNNNGG	3 cut(s)	382, 1207, 1405
BseMII	CTCAG	3 cut(s)	885, 987, 1389
BseNI	ACTGG	5 cut(s)	227, 554, 965, 1022, 1065
BseRI	GAGGAG	1 cut(s)	1340
BseSI	GKGCMC	1 cut(s)	785
BseXI	GCAGC	2 cut(s)	23, 1243
BseYI	CCCAGC	1 cut(s)	216
BsgI	GTGCAG	1 cut(s)	801
Bsh1236I	CGCG	1 cut(s)	320
BshFI	GGCC	3 cut(s)	192, 361, 695
BshNI	GGYRCC	2 cut(s)	780, 1219
BshTI	ACCGGT	1 cut(s)	640
BsiHKAI	GWGCWC	1 cut(s)	1334
BsiSI	CCGG	3 cut(s)	133, 641, 821
BslFI	GGGAC	1 cut(s)	233
BslI	CCNNNNNNNGG	3 cut(s)	382, 1207, 1405
BsmFI	GGGAC	1 cut(s)	233
BsmI	GAATGC	1 cut(s)	293
BsnI	GGCC	3 cut(s)	192, 361, 695
Bsp119I	TTCGAA	1 cut(s)	1083
Bsp1286I	GDGCHC	2 cut(s)	785, 1334
Bsp143I	GATC	8 cut(s)	106, 143, 322, 414, 531, 913, 1210, 1242
Bsp1720I	GCTNAGC	2 cut(s)	894, 1375
BspACI	CCGC	3 cut(s)	320, 523, 601
BspANI	GGCC	3 cut(s)	192, 361, 695
BspCNI	CTCAG	3 cut(s)	886, 986, 1388
BspFNI	CGCG	1 cut(s)	320
BspLI	GGNNCC	4 cut(s)	782, 1195, 1212, 1221
BspMAI	CTGCAG	3 cut(s)	76, 658, 1054
BspMI	ACCTGC	2 cut(s)	384, 661
BspOI	GCTAGC	1 cut(s)	666
BspPI	GGATC	6 cut(s)	151, 330, 409, 908, 1205, 1218
BspT104I	TTCGAA	1 cut(s)	1083
BspT107I	GGYRCC	2 cut(s)	780, 1219
BsrBI	CCGCTC	1 cut(s)	525
BsrFI	RCCGGY	2 cut(s)	640, 820
BsrI	ACTGG	5 cut(s)	227, 554, 965, 1022, 1065
BssAI	RCCGGY	2 cut(s)	640, 820
BssECI	CCNNGG	3 cut(s)	696, 1214, 1223
BssMI	GATC	8 cut(s)	106, 143, 322, 414, 531, 913, 1210, 1242
BssT1I	CCWWGG	2 cut(s)	696, 1214
Bst2UI	CCWGG	3 cut(s)	1077, 1224, 1269
Bst4CI	ACNGT	7 cut(s)	55, 874, 944, 983, 1114, 1141, 1416
Bst6I	CTCTTC	3 cut(s)	11, 75, 1016
BstBAI	YACGTR	1 cut(s)	967
BstBI	TTCGAA	1 cut(s)	1083
BstC8I	GCNNGC	3 cut(s)	664, 668, 706
BstDEI	CTNAG	3 cut(s)	894, 973, 1375
BstF5I	GGATG	4 cut(s)	231, 466, 995, 1129
BstFNI	CGCG	1 cut(s)	320
BstKTI	GATC	8 cut(s)	109, 146, 325, 417, 534, 916, 1213, 1245
BstMBI	GATC	8 cut(s)	106, 143, 322, 414, 531, 913, 1210, 1242
BstMWI	GCNNNNNNNGC	4 cut(s)	297, 701, 714, 1228
BstNI	CCWGG	3 cut(s)	1077, 1224, 1269
BstSCI	CCNGG	4 cut(s)	131, 1075, 1222, 1267
BstSFI	CTRYAG	5 cut(s)	72, 654, 979, 1050, 1363
BstSLI	GKGCMC	1 cut(s)	785
BstUI	CGCG	1 cut(s)	320
BstV1I	GCAGC	2 cut(s)	23, 1243
BstX2I	RGATCY	4 cut(s)	106, 322, 913, 1210
BstXI	CCANNNNNNTGG	1 cut(s)	549
BstYI	RGATCY	4 cut(s)	106, 322, 913, 1210
BsuRI	GGCC	3 cut(s)	192, 361, 695
BtsCI	GGATG	4 cut(s)	231, 466, 995, 1129
BtsI	GCAGTG	1 cut(s)	69
BtsIMutI	CAGTG	3 cut(s)	69, 1245, 1412
BveI	ACCTGC	2 cut(s)	384, 661
Cac8I	GCNNGC	3 cut(s)	664, 668, 706
Cfr10I	RCCGGY	2 cut(s)	640, 820
Cfr13I	GGNCC	1 cut(s)	590
Csp6I	GTAC	5 cut(s)	438, 755, 968, 1055, 1093
CspAI	ACCGGT	1 cut(s)	640
CviAII	CATG	4 cut(s)	118, 759, 1381, 1420
CviQI	GTAC	5 cut(s)	438, 755, 968, 1055, 1093
DdeI	CTNAG	3 cut(s)	894, 973, 1375
DpnI	GATC	8 cut(s)	108, 145, 324, 416, 533, 915, 1212, 1244
DpnII	GATC	8 cut(s)	106, 143, 322, 414, 531, 913, 1210, 1242
Eam1104I	CTCTTC	3 cut(s)	11, 75, 1016
EarI	CTCTTC	3 cut(s)	11, 75, 1016
Eco130I	CCWWGG	2 cut(s)	696, 1214
Eco47I	GGWCC	1 cut(s)	590
EcoRI	GAATTC	1 cut(s)	646
EcoRII	CCWGG	3 cut(s)	1075, 1222, 1267
EcoT14I	CCWWGG	2 cut(s)	696, 1214
EcoT22I	ATGCAT	1 cut(s)	293
ErhI	CCWWGG	2 cut(s)	696, 1214
FaeI	CATG	4 cut(s)	121, 762, 1384, 1423
FaqI	GGGAC	1 cut(s)	233
FatI	CATG	4 cut(s)	117, 758, 1380, 1419
FauI	CCCGC	1 cut(s)	594
FbaI	TGATCA	1 cut(s)	531
FblI	GTMKAC	1 cut(s)	45
Fnu4HI	GCNGC	3 cut(s)	37, 1232, 1430
FokI	GGATG	4 cut(s)	238, 473, 1002, 1136
Fsp4HI	GCNGC	3 cut(s)	37, 1232, 1430
FspBI	CTAG	8 cut(s)	188, 326, 612, 663, 711, 786, 908, 1215
GluI	GCNGC	3 cut(s)	37, 1232, 1430
GsaI	CCCAGC	1 cut(s)	220
HaeIII	GGCC	3 cut(s)	192, 361, 695
HapII	CCGG	3 cut(s)	133, 641, 821
Hin1II	CATG	4 cut(s)	121, 762, 1384, 1423
HincII	GTYRAC	1 cut(s)	1132
HindII	GTYRAC	1 cut(s)	1132
HindIII	AAGCTT	2 cut(s)	885, 1259
HinfI	GANTC	5 cut(s)	47, 278, 607, 746, 842
HpaII	CCGG	3 cut(s)	133, 641, 821
HphI	GGTGA	4 cut(s)	67, 616, 655, 947
Hpy166II	GTNNAC	3 cut(s)	46, 1047, 1132
Hpy188I	TCNGA	4 cut(s)	286, 918, 976, 1302
Hpy188III	TCNNGA	6 cut(s)	197, 326, 343, 383, 487, 1340
Hpy8I	GTNNAC	3 cut(s)	46, 1047, 1132
HpyAV	CCTTC	2 cut(s)	1154, 1201
HpyCH4III	ACNGT	7 cut(s)	55, 874, 944, 983, 1114, 1141, 1416
HpyCH4IV	ACGT	2 cut(s)	137, 966
HpyF10VI	GCNNNNNNNGC	4 cut(s)	297, 701, 714, 1228
HpyF3I	CTNAG	3 cut(s)	894, 973, 1375
HpySE526I	ACGT	2 cut(s)	137, 966
Hsp92II	CATG	4 cut(s)	121, 762, 1384, 1423
Ksp22I	TGATCA	1 cut(s)	531
Kzo9I	GATC	8 cut(s)	106, 143, 322, 414, 531, 913, 1210, 1242
LmnI	GCTCC	2 cut(s)	701, 1193
Lsp1109I	GCAGC	2 cut(s)	23, 1243
LweI	GCATC	4 cut(s)	451, 616, 704, 1416
MaeI	CTAG	8 cut(s)	188, 326, 612, 663, 711, 786, 908, 1215
MaeII	ACGT	2 cut(s)	137, 966
MaeIII	GTNAC	4 cut(s)	127, 149, 163, 1003
MalI	GATC	8 cut(s)	108, 145, 324, 416, 533, 915, 1212, 1244
MbiI	CCGCTC	1 cut(s)	525
MboI	GATC	8 cut(s)	106, 143, 322, 414, 531, 913, 1210, 1242
MboII	GAAGA	6 cut(s)	28, 92, 273, 471, 824, 1003
MflI	RGATCY	4 cut(s)	106, 322, 913, 1210
MhlI	GDGCHC	2 cut(s)	785, 1334
MluCI	AATT	2 cut(s)	617, 646
MlyI	GAGTC	4 cut(s)	41, 616, 755, 851
MmeI	TCCRAC	3 cut(s)	185, 198, 1325
MnlI	CCTC	7 cut(s)	102, 248, 390, 519, 603, 1318, 1409
Mph1103I	ATGCAT	1 cut(s)	293
MroXI	GAANNNNTTC	1 cut(s)	84
MseI	TTAA	3 cut(s)	900, 1275, 1317
MslI	CAYNNNNRTG	3 cut(s)	1277, 1385, 1424
MspI	CCGG	3 cut(s)	133, 641, 821
MspR9I	CCNGG	4 cut(s)	133, 1077, 1224, 1269
Mva1269I	GAATGC	1 cut(s)	293
MvaI	CCWGG	3 cut(s)	1077, 1224, 1269
MvnI	CGCG	1 cut(s)	320
MwoI	GCNNNNNNNGC	4 cut(s)	297, 701, 714, 1228
NciI	CCSGG	1 cut(s)	133
NdeII	GATC	8 cut(s)	106, 143, 322, 414, 531, 913, 1210, 1242
NheI	GCTAGC	1 cut(s)	662
NlaIII	CATG	4 cut(s)	121, 762, 1384, 1423
NlaIV	GGNNCC	4 cut(s)	782, 1195, 1212, 1221
NmuCI	GTSAC	2 cut(s)	127, 163
NsiI	ATGCAT	1 cut(s)	293
NspV	TTCGAA	1 cut(s)	1083
PctI	GAATGC	1 cut(s)	293
PdmI	GAANNNNTTC	1 cut(s)	84
PfeI	GAWTC	1 cut(s)	278
PinAI	ACCGGT	1 cut(s)	640
PkrI	GCNGC	3 cut(s)	38, 1233, 1431
PleI	GAGTC	4 cut(s)	41, 615, 754, 850
PpsI	GAGTC	4 cut(s)	41, 615, 754, 850
Ppu21I	YACGTR	1 cut(s)	967
PshBI	ATTAAT	1 cut(s)	1275
Psp6I	CCWGG	3 cut(s)	1075, 1222, 1267
PspFI	CCCAGC	1 cut(s)	216
PspGI	CCWGG	3 cut(s)	1075, 1222, 1267
PspN4I	GGNNCC	4 cut(s)	782, 1195, 1212, 1221
PspPI	GGNCC	1 cut(s)	590
PstI	CTGCAG	3 cut(s)	76, 658, 1054
PsuI	RGATCY	4 cut(s)	106, 322, 913, 1210
RsaI	GTAC	5 cut(s)	439, 756, 969, 1056, 1094
RsaNI	GTAC	5 cut(s)	438, 755, 968, 1055, 1093
RseI	CAYNNNNRTG	3 cut(s)	1277, 1385, 1424
SaqAI	TTAA	3 cut(s)	900, 1275, 1317
SatI	GCNGC	3 cut(s)	37, 1232, 1430
Sau3AI	GATC	8 cut(s)	106, 143, 322, 414, 531, 913, 1210, 1242
Sau96I	GGNCC	1 cut(s)	590
SchI	GAGTC	4 cut(s)	41, 616, 755, 851
ScrFI	CCNGG	4 cut(s)	133, 1077, 1224, 1269
SduI	GDGCHC	2 cut(s)	785, 1334
SfaNI	GCATC	4 cut(s)	451, 616, 704, 1416
SfcI	CTRYAG	5 cut(s)	72, 654, 979, 1050, 1363
SfuI	TTCGAA	1 cut(s)	1083
SinI	GGWCC	1 cut(s)	590
SmiMI	CAYNNNNRTG	3 cut(s)	1277, 1385, 1424
SmlI	CTYRAG	1 cut(s)	343
SmoI	CTYRAG	1 cut(s)	343
Sse9I	AATT	2 cut(s)	617, 646
SsiI	CCGC	3 cut(s)	320, 523, 601
SspI	AATATT	1 cut(s)	685
SspMI	CTAG	8 cut(s)	188, 326, 612, 663, 711, 786, 908, 1215
StyD4I	CCNGG	4 cut(s)	131, 1075, 1222, 1267
StyI	CCWWGG	2 cut(s)	696, 1214
TaaI	ACNGT	7 cut(s)	55, 874, 944, 983, 1114, 1141, 1416
TaiI	ACGT	2 cut(s)	140, 969
TaqI	TCGA	1 cut(s)	1083
TasI	AATT	2 cut(s)	617, 646
TatI	WGTACW	2 cut(s)	1054, 1092
TfiI	GAWTC	1 cut(s)	278
Tru1I	TTAA	3 cut(s)	900, 1275, 1317
Tru9I	TTAA	3 cut(s)	900, 1275, 1317
TscAI	CASTG	3 cut(s)	76, 1245, 1419
TseFI	GTSAC	2 cut(s)	127, 163
TseI	GCWGC	3 cut(s)	36, 1231, 1429
Tsp45I	GTSAC	2 cut(s)	127, 163
TspDTI	ATGAA	4 cut(s)	93, 471, 714, 1408
TspGWI	ACGGA	1 cut(s)	1136
TspRI	CASTG	3 cut(s)	76, 1245, 1419
VpaK11BI	GGWCC	1 cut(s)	590
VspI	ATTAAT	1 cut(s)	1275
XapI	RAATTY	1 cut(s)	646
XbaI	TCTAGA	1 cut(s)	325
XcmI	CCANNNNNNNNNTGG	1 cut(s)	546
XmaJI	CCTAGG	1 cut(s)	1214
XmiI	GTMKAC	1 cut(s)	45
XmnI	GAANNNNTTC	1 cut(s)	84
XspI	CTAG	8 cut(s)	188, 326, 612, 663, 711, 786, 908, 1215
Zsp2I	ATGCAT	1 cut(s)	293

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.