RLG00000007560
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
18196868 .. 18197497
630 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007560

Sequence Viewer

Length: 405 bp
ATGTTGGTGAGTAGGGGAAACGGGAGGGATAAGGGATATGCTGAGTCAGGAACATCGTCTCCTATTACGTCCTCTGCCACCTCCAAGTCCGATTACTTTGTCTTCTTCATCTTTCTCCGTCGTCCCTCTACCCAGGTTAGATCCAGTAGGTTTTCGTTATCGGAGAGAAGGCTCGAAGCTTTGGATAAAGCAGGAAGTGCTGGTCTCAGCTTCGGAACTCCTGGGGTTTTAGGCAGAGGAGGAAAGACGCATTCGGAGTGGGACTCGGCTCAAAGCACTCCGGCGAGAAATCGAGCTTCGATTGGAGGTTGTGCGCTAAGCAAAGCTCCAGTGTACAATGGCGGCAGAGCAGGGAGTCCTTCTAGAAAATACCGGGAGATTCTGGTGGGGAATTTGGAGCGTTGA

Protein Analysis

135

Amino Acids

14.31

Weight (kDa)

10.69

Isoelectric Point (pI)

50.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 342
AclWI GGATC 1 cut(s) 135
AcsI RAATTY 1 cut(s) 391
AfaI GTAC 1 cut(s) 335
AjnI CCWGG 2 cut(s) 132, 220
AloI GAACNNNNNNTCC 2 cut(s) 43, 75
AluBI AGCT 4 cut(s) 179, 210, 296, 326
AluI AGCT 4 cut(s) 179, 210, 296, 326
Alw26I GTCTC 2 cut(s) 63, 209
AlwI GGATC 1 cut(s) 135
ApoI RAATTY 1 cut(s) 391
AspLEI GCGC 1 cut(s) 316
AsuC2I CCSGG 1 cut(s) 374
AsuHPI GGTGA 1 cut(s) 19
BbsI GAAGAC 1 cut(s) 94
BciT130I CCWGG 2 cut(s) 134, 222
BcnI CCSGG 1 cut(s) 374
BcoDI GTCTC 2 cut(s) 63, 209
BfaI CTAG 1 cut(s) 363
BisI GCNGC 1 cut(s) 343
BlpI GCTNAGC 1 cut(s) 317
BlsI GCNGC 1 cut(s) 344
Bme1390I CCNGG 3 cut(s) 134, 222, 374
BmrFI CCNGG 3 cut(s) 134, 222, 374
BpiI GAAGAC 1 cut(s) 94
BplI GAGNNNNNCTC 2 cut(s) 248, 280
BpmI CTGGAG 1 cut(s) 312
Bpu1102I GCTNAGC 1 cut(s) 317
BpuMI CCSGG 1 cut(s) 374
BsaI GGTCTC 1 cut(s) 209
BsaJI CCNNGG 2 cut(s) 132, 221
BsaXI ACNNNNNCTCC 2 cut(s) 43, 73
Bse1I ACTGG 2 cut(s) 144, 329
BseBI CCWGG 2 cut(s) 134, 222
BseDI CCNNGG 2 cut(s) 132, 221
BseMII CTCAG 2 cut(s) 33, 220
BseNI ACTGG 2 cut(s) 144, 329
BseRI GAGGAG 1 cut(s) 252
BsiSI CCGG 2 cut(s) 281, 373
BslFI GGGAC 2 cut(s) 108, 275
BsmAI GTCTC 2 cut(s) 63, 209
BsmBI CGTCTC 1 cut(s) 63
BsmFI GGGAC 2 cut(s) 108, 275
BsmI GAATGC 1 cut(s) 250
Bso31I GGTCTC 1 cut(s) 209
Bsp1407I TGTACA 1 cut(s) 333
Bsp143I GATC 1 cut(s) 140
Bsp1720I GCTNAGC 1 cut(s) 317
BspACI CCGC 1 cut(s) 342
BspCNI CTCAG 2 cut(s) 34, 219
BspPI GGATC 1 cut(s) 135
BspTNI GGTCTC 1 cut(s) 209
BsrGI TGTACA 1 cut(s) 333
BsrI ACTGG 2 cut(s) 144, 329
BssECI CCNNGG 2 cut(s) 132, 221
BssMI GATC 1 cut(s) 140
Bst2UI CCWGG 2 cut(s) 134, 222
BstAPI GCANNNNNTGC 1 cut(s) 197
BstAUI TGTACA 1 cut(s) 333
BstDEI CTNAG 3 cut(s) 42, 206, 317
BstHHI GCGC 1 cut(s) 316
BstKTI GATC 1 cut(s) 143
BstMAI GTCTC 2 cut(s) 63, 209
BstMBI GATC 1 cut(s) 140
BstMWI GCNNNNNNNGC 1 cut(s) 197
BstNI CCWGG 2 cut(s) 134, 222
BstSCI CCNGG 3 cut(s) 132, 220, 372
BstV2I GAAGAC 1 cut(s) 94
BstX2I RGATCY 1 cut(s) 140
BstYI RGATCY 1 cut(s) 140
BtsIMutI CAGTG 1 cut(s) 336
CfoI GCGC 1 cut(s) 316
CseI GACGC 1 cut(s) 256
Csp6I GTAC 1 cut(s) 334
CviJI RGCY 6 cut(s) 172, 179, 210, 269, 296, 326
CviKI_1 RGCY 6 cut(s) 172, 179, 210, 269, 296, 326
CviQI GTAC 1 cut(s) 334
DdeI CTNAG 3 cut(s) 42, 206, 317
DpnI GATC 1 cut(s) 142
DpnII GATC 1 cut(s) 140
Eco31I GGTCTC 1 cut(s) 209
EcoRII CCWGG 2 cut(s) 132, 220
Esp3I CGTCTC 1 cut(s) 63
FaiI YATR 1 cut(s) 39
FaqI GGGAC 2 cut(s) 108, 275
Fnu4HI GCNGC 1 cut(s) 343
Fsp4HI GCNGC 1 cut(s) 343
FspBI CTAG 1 cut(s) 363
GlaI GCGC 1 cut(s) 315
GluI GCNGC 1 cut(s) 343
GsuI CTGGAG 1 cut(s) 312
HapII CCGG 2 cut(s) 281, 373
HgaI GACGC 1 cut(s) 256
HhaI GCGC 1 cut(s) 316
Hin6I GCGC 1 cut(s) 314
HinP1I GCGC 1 cut(s) 314
HindIII AAGCTT 1 cut(s) 177
HinfI GANTC 4 cut(s) 44, 263, 355, 379
HpaII CCGG 2 cut(s) 281, 373
HphI GGTGA 1 cut(s) 19
Hpy166II GTNNAC 1 cut(s) 334
Hpy188I TCNGA 4 cut(s) 91, 163, 215, 256
Hpy188III TCNNGA 2 cut(s) 48, 363
Hpy8I GTNNAC 1 cut(s) 334
Hpy99I CGWCG 1 cut(s) 123
HpyAV CCTTC 2 cut(s) 162, 369
HpyCH4IV ACGT 1 cut(s) 68
HpyF10VI GCNNNNNNNGC 1 cut(s) 197
HpyF3I CTNAG 3 cut(s) 42, 206, 317
HpySE526I ACGT 1 cut(s) 68
HspAI GCGC 1 cut(s) 314
Kzo9I GATC 1 cut(s) 140
LmnI GCTCC 2 cut(s) 331, 397
MaeI CTAG 1 cut(s) 363
MaeII ACGT 1 cut(s) 68
MalI GATC 1 cut(s) 142
MboI GATC 1 cut(s) 140
MboII GAAGA 2 cut(s) 94, 97
MflI RGATCY 1 cut(s) 140
MluCI AATT 1 cut(s) 391
MlyI GAGTC 3 cut(s) 53, 257, 364
MnlI CCTC 7 cut(s) 18, 82, 91, 136, 230, 233, 299
MspI CCGG 2 cut(s) 281, 373
MspR9I CCNGG 3 cut(s) 134, 222, 374
Mva1269I GAATGC 1 cut(s) 250
MvaI CCWGG 2 cut(s) 134, 222
MwoI GCNNNNNNNGC 1 cut(s) 197
NciI CCSGG 1 cut(s) 374
NdeII GATC 1 cut(s) 140
NmeAIII GCCGAG 1 cut(s) 245
PctI GAATGC 1 cut(s) 250
PfeI GAWTC 1 cut(s) 379
PkrI GCNGC 1 cut(s) 344
PleI GAGTC 3 cut(s) 52, 257, 363
PpsI GAGTC 3 cut(s) 52, 257, 363
Psp6I CCWGG 2 cut(s) 132, 220
PspGI CCWGG 2 cut(s) 132, 220
PsuI RGATCY 1 cut(s) 140
RsaI GTAC 1 cut(s) 335
RsaNI GTAC 1 cut(s) 334
SatI GCNGC 1 cut(s) 343
Sau3AI GATC 1 cut(s) 140
SchI GAGTC 3 cut(s) 53, 257, 364
ScrFI CCNGG 3 cut(s) 134, 222, 374
SetI ASST 9 cut(s) 71, 83, 138, 152, 181, 212, 298, 310, 328
Sse9I AATT 1 cut(s) 391
SsiI CCGC 1 cut(s) 342
SspMI CTAG 1 cut(s) 363
StyD4I CCNGG 3 cut(s) 132, 220, 372
TaiI ACGT 1 cut(s) 71
TaqI TCGA 3 cut(s) 174, 292, 299
TasI AATT 1 cut(s) 391
TatI WGTACW 1 cut(s) 333
TauI GCSGC 1 cut(s) 345
TfiI GAWTC 1 cut(s) 379
TscAI CASTG 1 cut(s) 336
TspDTI ATGAA 1 cut(s) 97
TspGWI ACGGA 1 cut(s) 107
TspRI CASTG 1 cut(s) 336
XapI RAATTY 1 cut(s) 391
XbaI TCTAGA 1 cut(s) 362
XspI CTAG 1 cut(s) 363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.