RLG00000007573

BTB POZ domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
18374481 .. 18374922
442 bp
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UTR
Exon/CDS
Intron
RLM00000007573

Sequence Viewer

Length: 369 bp
ATGGTCAAAGAACTCTTGGTTACAGAGAGAGTTTCGAGGCCCAAAGTGGAAAATTTGCTGAAGAAGGTGGCAATTGAGTTTGGTGAGCCTGGAACTAGTGATATGAAGGTGATTTTACTTGGGAAGCAGGGATTTTGTGTGAAGTTGAGTGTTCACAAGAATGTTCTAATGGAGAATAGCAACTTTTTAGCTGACAAACTTGCTGAACAACAGTCTAGTTCATCGTGCCTTGAAATTGAAGAGTGTGAGGATGTTGAAATATATGTTGAAACTATTGGGCTGATGTACTGCGAAGAAATGAAGCAACGGCTGATGAAGCAAAGCGTTTCCCATATGTTTTGTTATTGGTTGTGCTTCAATGCCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

123

Amino Acids

14.02

Weight (kDa)

5.23

Isoelectric Point (pI)

57.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 52
AcuI CTGAAG 1 cut(s) 80
AfaI GTAC 1 cut(s) 287
AgsI TTSAA 5 cut(s) 233, 239, 257, 269, 358
AhlI ACTAGT 1 cut(s) 95
AjnI CCWGG 1 cut(s) 88
AluBI AGCT 1 cut(s) 191
AluI AGCT 1 cut(s) 191
AoxI GGCC 1 cut(s) 38
ApoI RAATTY 1 cut(s) 52
AspS9I GGNCC 1 cut(s) 39
AsuHPI GGTGA 2 cut(s) 95, 121
BceAI ACGGC 1 cut(s) 323
BciT130I CCWGG 1 cut(s) 90
BcuI ACTAGT 1 cut(s) 95
BfaI CTAG 2 cut(s) 96, 216
Bme1390I CCNGG 1 cut(s) 90
BmgT120I GGNCC 1 cut(s) 39
BmrFI CCNGG 1 cut(s) 90
BseBI CCWGG 1 cut(s) 90
BseGI GGATG 1 cut(s) 256
BshFI GGCC 1 cut(s) 40
BsnI GGCC 1 cut(s) 40
BspANI GGCC 1 cut(s) 40
Bst2UI CCWGG 1 cut(s) 90
Bst4CI ACNGT 1 cut(s) 213
Bst6I CTCTTC 1 cut(s) 234
BstF5I GGATG 1 cut(s) 256
BstMWI GCNNNNNNNGC 1 cut(s) 316
BstNI CCWGG 1 cut(s) 90
BstSCI CCNGG 1 cut(s) 88
BsuRI GGCC 1 cut(s) 40
BtsCI GGATG 1 cut(s) 256
Cfr13I GGNCC 1 cut(s) 39
Csp6I GTAC 1 cut(s) 286
CviAII CATG 1 cut(s) 364
CviJI RGCY 5 cut(s) 40, 88, 191, 280, 310
CviKI_1 RGCY 5 cut(s) 40, 88, 191, 280, 310
CviQI GTAC 1 cut(s) 286
Eam1104I CTCTTC 1 cut(s) 234
EarI CTCTTC 1 cut(s) 234
Eco57I CTGAAG 1 cut(s) 80
EcoRII CCWGG 1 cut(s) 88
FaeI CATG 1 cut(s) 367
FaiI YATR 6 cut(s) 104, 262, 264, 333, 335, 365
FatI CATG 1 cut(s) 363
FauNDI CATATG 1 cut(s) 333
FokI GGATG 1 cut(s) 263
FspBI CTAG 2 cut(s) 96, 216
HaeIII GGCC 1 cut(s) 40
Hin1II CATG 1 cut(s) 367
HphI GGTGA 2 cut(s) 95, 121
Hpy166II GTNNAC 1 cut(s) 154
Hpy8I GTNNAC 1 cut(s) 154
HpyAV CCTTC 2 cut(s) 58, 100
HpyCH4III ACNGT 1 cut(s) 213
HpyF10VI GCNNNNNNNGC 1 cut(s) 316
Hsp92II CATG 1 cut(s) 367
LpnPI CCDG 3 cut(s) 75, 102, 113
MaeI CTAG 2 cut(s) 96, 216
MaeIII GTNAC 1 cut(s) 19
MboII GAAGA 3 cut(s) 73, 251, 305
MfeI CAATTG 1 cut(s) 72
MluCI AATT 3 cut(s) 52, 72, 234
MnlI CCTC 2 cut(s) 30, 241
MslI CAYNNNNRTG 1 cut(s) 159
MspR9I CCNGG 1 cut(s) 90
MunI CAATTG 1 cut(s) 72
MvaI CCWGG 1 cut(s) 90
MwoI GCNNNNNNNGC 1 cut(s) 316
NdeI CATATG 1 cut(s) 333
NlaIII CATG 1 cut(s) 367
Psp6I CCWGG 1 cut(s) 88
PspGI CCWGG 1 cut(s) 88
PspPI GGNCC 1 cut(s) 39
RsaI GTAC 1 cut(s) 287
RsaNI GTAC 1 cut(s) 286
RseI CAYNNNNRTG 1 cut(s) 159
Sau96I GGNCC 1 cut(s) 39
ScrFI CCNGG 1 cut(s) 90
SetI ASST 3 cut(s) 69, 111, 193
SmiMI CAYNNNNRTG 1 cut(s) 159
SpeI ACTAGT 1 cut(s) 95
Sse9I AATT 3 cut(s) 52, 72, 234
SspMI CTAG 2 cut(s) 96, 216
StyD4I CCNGG 1 cut(s) 88
TaaI ACNGT 1 cut(s) 213
TaqI TCGA 1 cut(s) 35
TasI AATT 3 cut(s) 52, 72, 234
TatI WGTACW 1 cut(s) 285
TspDTI ATGAA 4 cut(s) 119, 210, 314, 329
XapI RAATTY 1 cut(s) 52
XspI CTAG 2 cut(s) 96, 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.