Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0016104

Physical Location & Seq

Genomic Coordinates Reverse (-)

25342826 .. 25345354

Gene Structure 2529 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000008076

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2529 bp

ATGTCCACCACCACCATGCAGCTGAACCACCTCTGCTTCATTTTGCCACCAGACTGCGACGAAATCGAGCCACCGGACCACGAAAACCAGCAAAAACCCACCAAGGAGGTGTTAGAGGTCAGAAAGAATCACACCAGTCGCGAATGCCTGAGTCATGTTCGTGCTTTCGTCAAAGAATCACTCTGCAGGCTCTACGATCTGAAATGGATCAGTCTCTGTCACCATGACACGAGAAAAAACCGAGACCGGCACCATTCTGGGGTGTTTCAGGACATGGATGGGATACAACTCAAGGACAAGGTCGGAGGAGACAACCCGAGGATCTTCAGCTTCTCGGAGCTTTATATTGGTTCGAATGGTTTCAGTGAGGATCAAGTTTTAGGGAGTGGAGGTTTTGGGAAAGTGTACAGAGCGGTTCTGCCTAGTGATGGAACTGTCGTTGCTGTGAAGTGCTTGGTGGAGAGAGGAGAGCGGTTCGAGAAGACTTTTGTGGCGGAGTTGGTTGCGGTGGCTCACCTTCGTCACCGGAATCTTGTCCGGCTAAGGGGGTGGTGTGTTCATGAAAAAGAGCTGTTTTTGGTTTATGACTACATGCCGAACCTCAGCCTTGACCGCATACTTTTCAGGAAACCTGAGAATATAGGGTCTCCAACATCAGTACCTCTCAATTGGGAGCGTAGAAGGAACATAATCGGTGGCTTGGCAGCGGCGCTTTACTATCTTCACGAACAGTTGGAAACTCAGATCATTCACCGGGATGTCAAGACGAGTAATGTGATGCTTGATTCCCATTTTAATGCTCGGCTAGGAGACTTTGGCTTGGCACGGTGGCTGGAACATGAAATTGAGTACGAGATAAAGACACCATCGATGCAAAACCACCAGTTTCGGCTAGCAGAAACGACCAAAATTGGTGGAACAATAGGGTATTTGCCACCTGAAAGCTTCCAGAAACGAAGCGTGGCTACTGCAAAATCTGACGTTTTCAGCTTTGGGATTGTTGTTCTGGAGGTGGTGTCGGGTAGAAAGGCAGTAGATCTCACTTGTCCAGATGATCAGATCATATTGCTCGACTGGATCCGGAAGCTGTCTGATGAAGGGAAGCTTTTAAAAGCAAGGGACAAGAGGATTCCAGACGGGTCTTATCAGCTTCTTGACATGGAGTATCAGTTGCATCTTGCACTTCTTTGCACACTTCAAAATCCACAATCGCGACCAAACATGAAATGGGTTGTGGAAGCACTTTCTGGCAACATCCATGGCAAATTGCCGAGCCTCCCATCGTTTCAGTGCCACCCTCTCTACATCTCTCTATCCTCTGCCAGCAATACTAGCACAAACACTAGGTATACCATAGCCACCAGCACTGCAACTCTTGCATCATCTATTCTATCAACCTATGTCACAGCCACAGGAGAAACAATATATGCAACTGCTGACAATGGAAGCAGTGGAAGCAGTGAGGTCAGCACGTGTGAAAGTTTCCGACATAAGAAACCAACATTTCCCCTGGTTGAAACTCCACGAGAAATATCCTACATGGAAATTGTATCTGCCACAAATAATTTCGCAGATTCTCAGAGGGTAGCAGAGCTGGACTTTGGGACAGCCTACCAGGGTTTTCTCAACAACCGCCATCATGTCCTGGTAAAGCGGCTTGGAATGAAGACTTGCCCTGCATTGCGGGCACGATTCTCAAATGAACTTAAAAATTTGGGAAGGCTCCGCCACCGAAACTTGGTTCAGCTCCGTGGATGGTGCACTGAGCAAGGAGAAATGCTAGTTGTCTATGATTACTTAGCTGATCGCCTTCTAAGCCACCTACTTTTTCGTGAAGACTACAGATTTGGCCATTCAATCCTGCAATGGCGTCATAGATGCAACATTATCAAATCGCTTGCTTCTGCGATTCTTTATCTCCACGAGGAATGGGACGAACAAGTTATTCACAGAAACATTACCTCTTCTGCTGTTATTCTCGATCCAGACATGAACCCAAGACTCAGTTCTTTCGCTCTTGCTGAATTCTTGACACGGAACGACCATGGGCATCATGCAGTTACTGACACAAGCAAATCTGCTCGGGGGATTTTTGGTTACATGTCACCTGAATGTATGGAATCTGGAGAAGCAACCACAATGACTGACATATACAGCTTTGGTGTAGTAATACTTGAGGTTATAACTGGACAGATGGCGGTTGACTTTCGGCGGCCTGAGGTGCTACTGGTCAAGAGGGTCCGTGAATTTGGGGCACGGAAAAAGACTCTAGAGGATATGGCAGATTTTAGGTTGAATGGAGTGTACAATCAGAAGGAACTGTTGAGACTGTTTAAACTAGGAATTGCTTGTACACGCTCTAATCCTCAACTGAGACCGAGCATGAGGCAGATTGTAAGGATACTTGATGGGAATGACAAATGCTTGACGGAAATATGCAAAAAGGACGAAAGTGGGGAAGAATGGAGACAAGTGAATGATTCTGCTTTGTCGCTAATTAAGAGGATCCAAGCTCTAGGAATACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0008150 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009987 GO:0010033 GO:0014070 GO:0016020 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0043207 GO:0044464 GO:0046677 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

843

Amino Acids

95.87

Weight (kDa)

8.17

Isoelectric Point (pI)

41.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	122 - 346	5.4e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	124 - 414	7.6e-36	Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr	PF07714	529 - 802	3.3e-30	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	533 - 799	4.8e-24	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0016104)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32800
fragaria_vesca	FvH4_4g14630 FvH4_4g15750 FvH4_5g04690
malus_domestica	MD04G1008600.v1.1
prunus_persica	Prupe.1G007200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0415351
rosa_laevigata	RLG00000008076
rosa_multiflora	Rmu_sc0013726.1_g000001 Rmu_sc0028326.1_g000002
rosa_roxburghii	Rroxscaffold_5G00359130
rosa_rugosa	Rorug04G0133800
rosa_samantha	Rh4BG192800 Rh4DG191900
rosa_wichuraiana	Rw4G016520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2183
AccB1I	GGYRCC	1 cut(s)	249
AccBSI	CCGCTC	2 cut(s)	413, 472
AccI	GTMKAC	1 cut(s)	1349
AccII	CGCG	2 cut(s)	141, 1213
AccIII	TCCGGA	1 cut(s)	1080
AclWI	GGATC	8 cut(s)	215, 329, 378, 1072, 1085, 1976, 2500, 2513
AcoI	YGGCCR	1 cut(s)	1849
AcsI	RAATTY	3 cut(s)	1711, 2024, 2246
AcuI	CTGAAG	1 cut(s)	310
AcvI	CACGTG	1 cut(s)	1473
AcyI	GRCGYC	1 cut(s)	1870
AfaI	GTAC	5 cut(s)	407, 660, 851, 2306, 2353
AfiI	CCNNNNNNNGG	4 cut(s)	259, 428, 544, 1738
AflIII	ACRYGT	2 cut(s)	1472, 2100
AgsI	TTSAA	4 cut(s)	1199, 1517, 1857, 2296
AjnI	CCWGG	3 cut(s)	1509, 1614, 1644
AjuI	GAANNNNNNNTTGG	2 cut(s)	1990, 2022
Alw21I	GWGCWC	1 cut(s)	1763
Alw26I	GTCTC	8 cut(s)	218, 237, 303, 651, 804, 2320, 2368, 2461
Alw44I	GTGCAC	1 cut(s)	1759
AlwI	GGATC	8 cut(s)	215, 329, 378, 1072, 1085, 1976, 2500, 2513
AlwNI	CAGNNNCTG	2 cut(s)	216, 2063
Ama87I	CYCGRG	2 cut(s)	316, 2082
Aor13HI	TCCGGA	1 cut(s)	1080
AoxI	GGCC	2 cut(s)	1849, 2213
ApaLI	GTGCAC	1 cut(s)	1759
ApeKI	GCWGC	2 cut(s)	19, 704
ApoI	RAATTY	3 cut(s)	1711, 2024, 2246
ArsI	GACNNNNNNTTYG	2 cut(s)	1829, 1861
Asp700I	GAANNNNTTC	1 cut(s)	359
AspLEI	GCGC	1 cut(s)	712
AspS9I	GGNCC	2 cut(s)	76, 2239
AsuC2I	CCSGG	1 cut(s)	755
AsuHPI	GGTGA	5 cut(s)	212, 506, 515, 743, 2097
AsuII	TTCGAA	1 cut(s)	353
AsuNHI	GCTAGC	1 cut(s)	892
AvaI	CYCGRG	2 cut(s)	316, 2082
AvaII	GGWCC	2 cut(s)	76, 2239
AxyI	CCTNAGG	1 cut(s)	2217
BaeGI	GKGCMC	3 cut(s)	1690, 1763, 2257
BaeI	ACNNNNGTAYC	2 cut(s)	642, 675
BalI	TGGCCA	1 cut(s)	1851
BamHI	GGATCC	2 cut(s)	1077, 2505
BanI	GGYRCC	1 cut(s)	249
BarI	GAAGNNNNNNTAC	2 cut(s)	949, 981
BauI	CACGAG	3 cut(s)	229, 1524, 1922
BbrPI	CACGTG	1 cut(s)	1473
BbsI	GAAGAC	3 cut(s)	488, 1673, 1842
Bbv12I	GWGCWC	1 cut(s)	1763
BbvCI	CCTCAGC	1 cut(s)	602
BbvI	GCAGC	2 cut(s)	31, 716
BccI	CCATC	8 cut(s)	272, 422, 874, 1288, 1644, 1749, 2188, 2402
BciT130I	CCWGG	3 cut(s)	1511, 1616, 1646
BciVI	GTATCC	2 cut(s)	276, 2394
BclI	TGATCA	1 cut(s)	1054
BcnI	CCSGG	1 cut(s)	755
BcoDI	GTCTC	8 cut(s)	218, 237, 303, 651, 804, 2320, 2368, 2461
BfaI	CTAG	9 cut(s)	423, 806, 893, 1332, 1344, 1781, 2270, 2339, 2516
BfmI	CTRYAG	2 cut(s)	184, 1840
BfoI	RGCGCY	1 cut(s)	713
BfuI	GTATCC	2 cut(s)	276, 2394
BglII	AGATCT	1 cut(s)	1036
BisI	GCNGC	5 cut(s)	20, 705, 708, 1655, 2213
BlsI	GCNGC	5 cut(s)	21, 706, 709, 1656, 2214
Bme1390I	CCNGG	4 cut(s)	755, 1511, 1616, 1646
Bme18I	GGWCC	2 cut(s)	76, 2239
BmeT110I	CYCGRG	2 cut(s)	316, 2082
BmgT120I	GGNCC	2 cut(s)	76, 2239
BmiI	GGNNCC	5 cut(s)	251, 1079, 1724, 2240, 2507
BmrFI	CCNGG	4 cut(s)	755, 1511, 1616, 1646
BmsI	GCATC	6 cut(s)	768, 861, 1183, 1388, 1868, 2059
BmtI	GCTAGC	1 cut(s)	896
BpiI	GAAGAC	3 cut(s)	488, 1673, 1842
BpmI	CTGGAG	2 cut(s)	1028, 2145
Bpu10I	CCTNAGC	2 cut(s)	542, 602
Bpu14I	TTCGAA	1 cut(s)	353
BpuEI	CTTGAG	2 cut(s)	275, 2195
BpuMI	CCSGG	1 cut(s)	755
Bsa29I	ATCGAT	1 cut(s)	869
BsaAI	YACGTR	1 cut(s)	1473
BsaHI	GRCGYC	1 cut(s)	1870
BsaI	GGTCTC	3 cut(s)	237, 651, 2368
BsaJI	CCNNGG	7 cut(s)	102, 317, 1258, 1509, 1615, 1750, 2044
BsaWI	WCCGGW	3 cut(s)	73, 525, 1080
BsaXI	ACNNNNNCTCC	6 cut(s)	376, 406, 1001, 1031, 1154, 1184
Bsc4I	CCNNNNNNNGG	4 cut(s)	259, 428, 544, 1738
Bse118I	RCCGGY	1 cut(s)	246
Bse1I	ACTGG	5 cut(s)	135, 883, 1079, 2191, 2232
Bse21I	CCTNAGG	1 cut(s)	2217
Bse3DI	GCAATG	2 cut(s)	1679, 1871
BseAI	TCCGGA	1 cut(s)	1080
BseBI	CCWGG	3 cut(s)	1511, 1616, 1646
BseCI	ATCGAT	1 cut(s)	869
BseDI	CCNNGG	7 cut(s)	102, 317, 1258, 1509, 1615, 1750, 2044
BseGI	GGATG	4 cut(s)	283, 763, 1254, 1760
BseLI	CCNNNNNNNGG	4 cut(s)	259, 428, 544, 1738
BseMI	GCAATG	2 cut(s)	1679, 1871
BseMII	CTCAG	9 cut(s)	140, 616, 624, 755, 1592, 1755, 2017, 2208, 2363
BseNI	ACTGG	5 cut(s)	135, 883, 1079, 2191, 2232
BseRI	GAGGAG	2 cut(s)	321, 480
BseSI	GKGCMC	3 cut(s)	1690, 1763, 2257
BseXI	GCAGC	2 cut(s)	31, 716
Bsh1236I	CGCG	2 cut(s)	141, 1213
BshFI	GGCC	2 cut(s)	1851, 2215
BshNI	GGYRCC	1 cut(s)	249
BshVI	ATCGAT	1 cut(s)	869
BsiHKAI	GWGCWC	1 cut(s)	1763
BsiHKCI	CYCGRG	2 cut(s)	316, 2082
BsiSI	CCGG	6 cut(s)	74, 247, 526, 538, 754, 1081
BslFI	GGGAC	3 cut(s)	1133, 1618, 1946
BslI	CCNNNNNNNGG	4 cut(s)	259, 428, 544, 1738
BsmAI	GTCTC	8 cut(s)	218, 237, 303, 651, 804, 2320, 2368, 2461
BsmFI	GGGAC	3 cut(s)	1133, 1618, 1946
BsmI	GAATGC	1 cut(s)	149
BsnI	GGCC	2 cut(s)	1851, 2215
Bso31I	GGTCTC	3 cut(s)	237, 651, 2368
BsoBI	CYCGRG	2 cut(s)	316, 2082
Bsp119I	TTCGAA	1 cut(s)	353
Bsp1286I	GDGCHC	3 cut(s)	1690, 1763, 2257
Bsp13I	TCCGGA	1 cut(s)	1080
Bsp1407I	TGTACA	3 cut(s)	405, 2304, 2351
Bsp19I	CCATGG	2 cut(s)	1258, 2044
Bsp68I	TCGCGA	2 cut(s)	141, 1213
BspANI	GGCC	2 cut(s)	1851, 2215
BspCNI	CTCAG	9 cut(s)	141, 615, 625, 754, 1591, 1756, 2016, 2209, 2364
BspDI	ATCGAT	1 cut(s)	869
BspEI	TCCGGA	1 cut(s)	1080
BspFNI	CGCG	2 cut(s)	141, 1213
BspHI	TCATGA	1 cut(s)	559
BspLI	GGNNCC	5 cut(s)	251, 1079, 1724, 2240, 2507
BspMAI	CTGCAG	1 cut(s)	188
BspOI	GCTAGC	1 cut(s)	896
BspPI	GGATC	8 cut(s)	215, 329, 378, 1072, 1085, 1976, 2500, 2513
BspT104I	TTCGAA	1 cut(s)	353
BspT107I	GGYRCC	1 cut(s)	249
BspTNI	GGTCTC	3 cut(s)	237, 651, 2368
BsrBI	CCGCTC	2 cut(s)	413, 472
BsrDI	GCAATG	2 cut(s)	1679, 1871
BsrFI	RCCGGY	1 cut(s)	246
BsrGI	TGTACA	3 cut(s)	405, 2304, 2351
BsrI	ACTGG	5 cut(s)	135, 883, 1079, 2191, 2232
BssAI	RCCGGY	1 cut(s)	246
BssECI	CCNNGG	7 cut(s)	102, 317, 1258, 1509, 1615, 1750, 2044
BssNAI	GTATAC	1 cut(s)	1350
BssNI	GRCGYC	1 cut(s)	1870
BssSI	CACGAG	3 cut(s)	229, 1524, 1922
BssT1I	CCWWGG	3 cut(s)	102, 1258, 2044
Bst1107I	GTATAC	1 cut(s)	1350
Bst2BI	CACGAG	3 cut(s)	229, 1524, 1922
Bst2UI	CCWGG	3 cut(s)	1511, 1616, 1646
Bst4CI	ACNGT	5 cut(s)	436, 732, 828, 2322, 2331
Bst6I	CTCTTC	1 cut(s)	1969
BstACI	GRCGYC	1 cut(s)	1870
BstAPI	GCANNNNNTGC	1 cut(s)	1376
BstAUI	TGTACA	3 cut(s)	405, 2304, 2351
BstBAI	YACGTR	1 cut(s)	1473
BstBI	TTCGAA	1 cut(s)	353
BstC8I	GCNNGC	5 cut(s)	188, 894, 1324, 1686, 1899
BstDSI	CCRYGG	3 cut(s)	1258, 1750, 2044
BstF5I	GGATG	4 cut(s)	283, 763, 1254, 1760
BstFNI	CGCG	2 cut(s)	141, 1213
BstH2I	RGCGCY	1 cut(s)	713
BstHHI	GCGC	1 cut(s)	712
BstMAI	GTCTC	8 cut(s)	218, 237, 303, 651, 804, 2320, 2368, 2461
BstMWI	GCNNNNNNNGC	7 cut(s)	612, 1332, 1376, 1455, 1685, 1815, 2221
BstNI	CCWGG	3 cut(s)	1511, 1616, 1646
BstNSI	RCATGY	2 cut(s)	595, 2104
BstSCI	CCNGG	4 cut(s)	753, 1509, 1614, 1644
BstSFI	CTRYAG	2 cut(s)	184, 1840
BstSLI	GKGCMC	3 cut(s)	1690, 1763, 2257
BstUI	CGCG	2 cut(s)	141, 1213
BstV1I	GCAGC	2 cut(s)	31, 716
BstV2I	GAAGAC	3 cut(s)	488, 1673, 1842
BstX2I	RGATCY	4 cut(s)	321, 1036, 1077, 2505
BstYI	RGATCY	4 cut(s)	321, 1036, 1077, 2505
BstZ17I	GTATAC	1 cut(s)	1350
Bsu15I	ATCGAT	1 cut(s)	869
Bsu36I	CCTNAGG	1 cut(s)	2217
BsuI	GTATCC	2 cut(s)	276, 2394
BsuRI	GGCC	2 cut(s)	1851, 2215
BsuTUI	ATCGAT	1 cut(s)	869
BtgI	CCRYGG	3 cut(s)	1258, 1750, 2044
BtsCI	GGATG	4 cut(s)	283, 763, 1254, 1760
BtsI	GCAGTG	3 cut(s)	1365, 1456, 1465
BtsIMutI	CAGTG	6 cut(s)	370, 1295, 1365, 1456, 1465, 1761
BtuMI	TCGCGA	2 cut(s)	141, 1213
Cac8I	GCNNGC	5 cut(s)	188, 894, 1324, 1686, 1899
CaiI	CAGNNNCTG	2 cut(s)	216, 2063
CciI	TCATGA	1 cut(s)	559
CfoI	GCGC	1 cut(s)	712
Cfr10I	RCCGGY	1 cut(s)	246
Cfr13I	GGNCC	2 cut(s)	76, 2239
ClaI	ATCGAT	1 cut(s)	869
CseI	GACGC	1 cut(s)	1859
Csp6I	GTAC	5 cut(s)	406, 659, 850, 2305, 2352
CspCI	CAANNNNNGTGG	2 cut(s)	895, 930
CviQI	GTAC	5 cut(s)	406, 659, 850, 2305, 2352
DraI	TTTAAA	2 cut(s)	1110, 2335
EaeI	YGGCCR	1 cut(s)	1849
Eam1104I	CTCTTC	1 cut(s)	1969
EarI	CTCTTC	1 cut(s)	1969
EciI	GGCGGA	2 cut(s)	509, 1715
Eco130I	CCWWGG	3 cut(s)	102, 1258, 2044
Eco31I	GGTCTC	3 cut(s)	237, 651, 2368
Eco47I	GGWCC	2 cut(s)	76, 2239
Eco57I	CTGAAG	1 cut(s)	310
Eco72I	CACGTG	1 cut(s)	1473
Eco81I	CCTNAGG	1 cut(s)	2217
Eco88I	CYCGRG	2 cut(s)	316, 2082
EcoRI	GAATTC	1 cut(s)	2024
EcoRII	CCWGG	3 cut(s)	1509, 1614, 1644
EcoT14I	CCWWGG	3 cut(s)	102, 1258, 2044
ErhI	CCWWGG	3 cut(s)	102, 1258, 2044
FalI	AAGNNNNNCTT	2 cut(s)	1089, 1121
FaqI	GGGAC	3 cut(s)	1133, 1618, 1946
FauI	CCCGC	1 cut(s)	1677
FbaI	TGATCA	1 cut(s)	1054
FblI	GTMKAC	1 cut(s)	1349
Fnu4HI	GCNGC	5 cut(s)	20, 705, 708, 1655, 2213
FokI	GGATG	4 cut(s)	290, 770, 1241, 1767
Fsp4HI	GCNGC	5 cut(s)	20, 705, 708, 1655, 2213
FspBI	CTAG	9 cut(s)	423, 806, 893, 1332, 1344, 1781, 2270, 2339, 2516
GlaI	GCGC	1 cut(s)	711
GluI	GCNGC	5 cut(s)	20, 705, 708, 1655, 2213
GsuI	CTGGAG	2 cut(s)	1028, 2145
HaeII	RGCGCY	1 cut(s)	713
HaeIII	GGCC	2 cut(s)	1851, 2215
HapII	CCGG	6 cut(s)	74, 247, 526, 538, 754, 1081
HgaI	GACGC	1 cut(s)	1859
HhaI	GCGC	1 cut(s)	712
Hin1I	GRCGYC	1 cut(s)	1870
Hin6I	GCGC	1 cut(s)	710
HinP1I	GCGC	1 cut(s)	710
HincII	GTYRAC	1 cut(s)	2203
HindII	GTYRAC	1 cut(s)	2203
HindIII	AAGCTT	2 cut(s)	943, 1103
HpaII	CCGG	6 cut(s)	74, 247, 526, 538, 754, 1081
HphI	GGTGA	5 cut(s)	212, 506, 515, 743, 2097
Hpy166II	GTNNAC	7 cut(s)	6, 406, 1350, 1761, 2203, 2305, 2354
Hpy8I	GTNNAC	7 cut(s)	6, 406, 1350, 1761, 2203, 2305, 2354
Hpy99I	CGWCG	1 cut(s)	62
HpyAV	CCTTC	6 cut(s)	527, 675, 1091, 1713, 1820, 2308
HpyCH4III	ACNGT	5 cut(s)	436, 732, 828, 2322, 2331
HpyCH4IV	ACGT	2 cut(s)	981, 1472
HpyF10VI	GCNNNNNNNGC	7 cut(s)	612, 1332, 1376, 1455, 1685, 1815, 2221
HpySE526I	ACGT	2 cut(s)	981, 1472
Hsp92I	GRCGYC	1 cut(s)	1870
HspAI	GCGC	1 cut(s)	710
Kpn2I	TCCGGA	1 cut(s)	1080
Ksp22I	TGATCA	1 cut(s)	1054
LmnI	GCTCC	4 cut(s)	337, 673, 1728, 1752
Lsp1109I	GCAGC	2 cut(s)	31, 716
LweI	GCATC	6 cut(s)	768, 861, 1183, 1388, 1868, 2059
MaeI	CTAG	9 cut(s)	423, 806, 893, 1332, 1344, 1781, 2270, 2339, 2516
MaeII	ACGT	2 cut(s)	981, 1472
MaeIII	GTNAC	6 cut(s)	218, 521, 1402, 2059, 2096, 2103
MbiI	CCGCTC	2 cut(s)	413, 472
MboII	GAAGA	7 cut(s)	316, 493, 713, 1678, 1847, 1956, 2471
MfeI	CAATTG	1 cut(s)	667
MflI	RGATCY	4 cut(s)	321, 1036, 1077, 2505
MhlI	GDGCHC	3 cut(s)	1690, 1763, 2257
MlsI	TGGCCA	1 cut(s)	1851
MluNI	TGGCCA	1 cut(s)	1851
MlyI	GAGTC	3 cut(s)	160, 1995, 2260
MmeI	TCCRAC	4 cut(s)	283, 674, 714, 1510
Mox20I	TGGCCA	1 cut(s)	1851
MroI	TCCGGA	1 cut(s)	1080
MroXI	GAANNNNTTC	1 cut(s)	359
MscI	TGGCCA	1 cut(s)	1851
MseI	TTAA	5 cut(s)	795, 1109, 1707, 2334, 2499
MslI	CAYNNNNRTG	5 cut(s)	14, 159, 756, 795, 2110
Msp20I	TGGCCA	1 cut(s)	1851
MspA1I	CMGCKG	2 cut(s)	22, 707
MspI	CCGG	6 cut(s)	74, 247, 526, 538, 754, 1081
MspR9I	CCNGG	4 cut(s)	755, 1511, 1616, 1646
MssI	GTTTAAAC	1 cut(s)	2335
MunI	CAATTG	1 cut(s)	667
Mva1269I	GAATGC	1 cut(s)	149
MvaI	CCWGG	3 cut(s)	1511, 1616, 1646
MvnI	CGCG	2 cut(s)	141, 1213
MwoI	GCNNNNNNNGC	7 cut(s)	612, 1332, 1376, 1455, 1685, 1815, 2221
NciI	CCSGG	1 cut(s)	755
NcoI	CCATGG	2 cut(s)	1258, 2044
NheI	GCTAGC	1 cut(s)	892
NlaIV	GGNNCC	5 cut(s)	251, 1079, 1724, 2240, 2507
NmeAIII	GCCGAG	2 cut(s)	781, 1296
NmuCI	GTSAC	4 cut(s)	218, 521, 1402, 2103
NruI	TCGCGA	2 cut(s)	141, 1213
NspI	RCATGY	2 cut(s)	595, 2104
NspV	TTCGAA	1 cut(s)	353
PagI	TCATGA	1 cut(s)	559
PciI	ACATGT	1 cut(s)	2100
PctI	GAATGC	1 cut(s)	149
PdmI	GAANNNNTTC	1 cut(s)	359
PflFI	GACNNNGTC	1 cut(s)	299
PkrI	GCNGC	5 cut(s)	21, 706, 709, 1656, 2214
PleI	GAGTC	3 cut(s)	159, 1995, 2260
PmaCI	CACGTG	1 cut(s)	1473
PmeI	GTTTAAAC	1 cut(s)	2335
PmlI	CACGTG	1 cut(s)	1473
PpsI	GAGTC	3 cut(s)	159, 1995, 2260
Ppu21I	YACGTR	1 cut(s)	1473
PscI	ACATGT	1 cut(s)	2100
PsiI	TTATAA	1 cut(s)	2183
Psp6I	CCWGG	3 cut(s)	1509, 1614, 1644
PspCI	CACGTG	1 cut(s)	1473
PspGI	CCWGG	3 cut(s)	1509, 1614, 1644
PspN4I	GGNNCC	5 cut(s)	251, 1079, 1724, 2240, 2507
PspPI	GGNCC	2 cut(s)	76, 2239
PstI	CTGCAG	1 cut(s)	188
PstNI	CAGNNNCTG	2 cut(s)	216, 2063
PsuI	RGATCY	4 cut(s)	321, 1036, 1077, 2505
PsyI	GACNNNGTC	1 cut(s)	299
PvuII	CAGCTG	1 cut(s)	22
RruI	TCGCGA	2 cut(s)	141, 1213
RsaI	GTAC	5 cut(s)	407, 660, 851, 2306, 2353
RsaNI	GTAC	5 cut(s)	406, 659, 850, 2305, 2352
RseI	CAYNNNNRTG	5 cut(s)	14, 159, 756, 795, 2110
SaqAI	TTAA	5 cut(s)	795, 1109, 1707, 2334, 2499
SatI	GCNGC	5 cut(s)	20, 705, 708, 1655, 2213
Sau96I	GGNCC	2 cut(s)	76, 2239
SchI	GAGTC	3 cut(s)	160, 1995, 2260
ScrFI	CCNGG	4 cut(s)	755, 1511, 1616, 1646
SduI	GDGCHC	3 cut(s)	1690, 1763, 2257
SfaNI	GCATC	6 cut(s)	768, 861, 1183, 1388, 1868, 2059
SfcI	CTRYAG	2 cut(s)	184, 1840
SfuI	TTCGAA	1 cut(s)	353
SinI	GGWCC	2 cut(s)	76, 2239
SmiMI	CAYNNNNRTG	5 cut(s)	14, 159, 756, 795, 2110
SmlI	CTYRAG	2 cut(s)	290, 2174
SmoI	CTYRAG	2 cut(s)	290, 2174
SspMI	CTAG	9 cut(s)	423, 806, 893, 1332, 1344, 1781, 2270, 2339, 2516
StyD4I	CCNGG	4 cut(s)	753, 1509, 1614, 1644
StyI	CCWWGG	3 cut(s)	102, 1258, 2044
TaaI	ACNGT	5 cut(s)	436, 732, 828, 2322, 2331
TaiI	ACGT	2 cut(s)	984, 1475
TaqI	TCGA	6 cut(s)	66, 353, 477, 869, 1071, 1980
TaqII	GACCGA	1 cut(s)	2392
TatI	WGTACW	3 cut(s)	405, 2304, 2351
TauI	GCSGC	3 cut(s)	710, 1657, 2215
Tru1I	TTAA	5 cut(s)	795, 1109, 1707, 2334, 2499
Tru9I	TTAA	5 cut(s)	795, 1109, 1707, 2334, 2499
TscAI	CASTG	6 cut(s)	370, 1295, 1372, 1456, 1465, 1768
TseFI	GTSAC	4 cut(s)	218, 521, 1402, 2103
TseI	GCWGC	2 cut(s)	19, 704
Tsp45I	GTSAC	4 cut(s)	218, 521, 1402, 2103
TspDTI	ATGAA	9 cut(s)	28, 548, 576, 855, 1110, 1238, 1679, 1716, 2006
TspGWI	ACGGA	5 cut(s)	1739, 2050, 2231, 2272, 2444
TspRI	CASTG	6 cut(s)	370, 1295, 1372, 1456, 1465, 1768
Tth111I	GACNNNGTC	1 cut(s)	299
VneI	GTGCAC	1 cut(s)	1759
VpaK11BI	GGWCC	2 cut(s)	76, 2239
XapI	RAATTY	3 cut(s)	1711, 2024, 2246
XbaI	TCTAGA	1 cut(s)	2269
XceI	RCATGY	2 cut(s)	595, 2104
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1224
XmiI	GTMKAC	1 cut(s)	1349
XmnI	GAANNNNTTC	1 cut(s)	359
XspI	CTAG	9 cut(s)	423, 806, 893, 1332, 1344, 1781, 2270, 2339, 2516

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.