Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0016104

Physical Location & Seq

Genomic Coordinates Forward (+)

37700380 .. 37722582

Gene Structure 22203 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG191900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2583 bp

ATGAATCTAAAACCCAGTAAAATCCACTCAACTGAAAACAATCGGACTAATCAGAAGCGATTGAAAGCTAGAGAGCTGAACCACCTCTGCTTCATTTTGCCACCAGACTGCGACGAAGTCGAGCCACCGGACGACGAAAACCAGCAAAAACCCACCAAGGAGGTGTTAGAGGTCAGAAAGAATCACACCTGTCGCGAATGCCTGAGTCATGTTCGTGCTTTCGTCAAAGAGTCACTCTGCAGGCTCTACGACCTGAAATGGATCAGTCTCTGTCACCATGACACGAGAAAAAACCGAGACCAGCACCATTCTGGGGTGTTTCAGGACATGGATGGGATACAACTCAAGGACAAGGTCGGAGGAGACAACCCGAGGATCTTCAGCTTCTCGGAGCTTTATATTGGTTCGAATGGTTTCAGTGAGGATCAAGTTTTAGGGAGTGGAGGTTTTGGGAAAGTGTACAGAGCGGTTCTGCCTAGTGATGGAACTGTTGTTGCTGTGAAGTCCTTGGTGGAGAGAGGAGAGCGGTTCGAGAAGACTTTTGTGGCGGAGTTGGTTGCGGTGGCTCACCTTCGTCACCGGAATCTTGTCCGGTTAAGGGGGTGGTGTGTTCATGAAAAAGAGCTGTTTTTGGTTTATGACTACATGCCGAACCTCAGCCTTGACCGCATACTTTTCAGGAAACCTGAGAATATAGGGTCTCCGACATCAGTGCCTCTCAATTGGGAGCGTAGAAGGAACATAATCGGTGGCTTGGCAGCGGCGCTTTACTATCTTCACGAACAGTTGGAAACTCAAATCATTCACCGGGATGTCAAGACGAGTAATGTGATGCTTGATTCCCATTTTAATGCTCGGCTAGGTGACTTTGGCTTGGCACGGTGGCTGGAACATGAAATTGAGTACGAGATAAAGACACCATCGATGCAAAACCACCAGTTTCGGGTGGCAGAAACGACCAAAATTGGTGGAACCATAGGGTATTTGCCACCTGAAAGCTTCCAGAAACGAAGCGTGGCTACTGCAAAATCTGACGTTTTCAGCTTTGGGATTGTTGTTCTGGAGGTGGTGTCGGGTAGAAGGGCAGTAGATCTCACTTGTCCAGATGATCAGATCATATTGCTCGACTGGATCCGGAAGCTGTCTGATGAAGGGAAGCTTTTAAAAGCAAGGGACAAGAGGATTCCAGACGGGTCTTATCAGCTTCTTGACATGGAGTATCAGTTGCATCTTGCACTTCTTTGTACACTTCAAAATCCACAATCGCGACCAAACATGAAATGGGTTGTGGAAGCACTTTCTGGCAACATCCATGGCAAATTGCCAAGCCTCCCATCGTTTCAGTGCCACCCTCTCTACATCTCTCTATCCTCTGCCAGCAATACTAGCACAAACACCAGGTACACCATAGCCACCACCACTGCATCTCTTGAATCATCTATTCTATCAACCTATGTCACAGCCAGTGGAGAAACCATATATGCAACCGCTGACAATGGAAACAGTGGAAGCAGTGAGGTCAGCACGTGTGAAAGCTTCCGACATAAGAAACCAACATTTCCCCTGGTTGAAACTCCACGAGAAATATCCTACATGGAAATTGTATCTGCCACAAATAATTTCGCAGATTCTCAGAAGGTAGCAGAGCTGGACTTTGGAACAGCCTACCAGGGTTTTCTCAACAACCGCCATCATGTCCTGGTAAAGCGGCTTGGAATGAAGACTTGCCCTGCATTGCGGGCACGATTCTCAAATGAACTTAAAAACTTGGGAAGGCTCCGCCACCGAAACTTGGTTCAGCTCCGTGGATGGTGCACTGAGCAAGGAGAAATGCTAGTTGTCTACGATTACTTAGCTGATCGCCTTCTAAGCCACCTACTTTTTCGTGAAGACTACAGATTTGGCCACTCAATCCTGCAATGGCGTCATAGATACAACATTATCAAATCGCTTGCTTCTGCGATACTTTATCTCCACGAGGAATGGGACGAACAAGTTATTCACAGAAACATTACCTCTTCTGCTGTAATTCTTGATCCAGACATGAACCCAAGGCTCAGTTCTTTCGCCCTTGCTGAATTCTTGACACGGAACGACCATGGGCACCATGCAGTTACTGACACAAGCAAATCTGCTCGAGGGATTTTTGGTTACATGTCACCTGAATGTATGGAATCTGGAGAAGCGACCACAGTGACTGACATATACAGCTTTGGTGTAGTAATACTTGAGGTTATAACTGGACAGATGGCAGTTGACTTTCGGCGGCCTGAGGTGCTACTGGTCAAGAGGGTCCGTGAATTTGGGGCACGGAAAAAGACTTTAGAGGATATGGCAGATTTTAGGTTGAATGGAGTGTACAATCAGAAGGAACTGTTGAGACTGTTTAAACTAGGAATTGCTTGTACACGCTCCAATCCTCAACTGAGACCGAGCATGAGGCAGATTGTAAGGATACTTGATGGGAATGACAAATGCTTGACGGAAATATGCAAAAAGGACGAAAGTGGGGAAGAATGGAGACGAGTGAATGATTCTGCTTTGTCGCTAATTAAGAGGATCCAAGCTCTAGGAATACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0008150 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009987 GO:0010033 GO:0014070 GO:0016020 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0043207 GO:0044464 GO:0046677 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

860

Amino Acids

98.11

Weight (kDa)

8.49

Isoelectric Point (pI)

40.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	140 - 364	1.2e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	142 - 432	8.3e-36	Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr	PF07714	545 - 820	4e-30	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	551 - 817	4.2e-24	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0016104)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32800
fragaria_vesca	FvH4_4g14630 FvH4_4g15750 FvH4_5g04690
malus_domestica	MD04G1008600.v1.1
prunus_persica	Prupe.1G007200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0415351
rosa_laevigata	RLG00000008076
rosa_multiflora	Rmu_sc0013726.1_g000001 Rmu_sc0028326.1_g000002
rosa_roxburghii	Rroxscaffold_5G00359130
rosa_rugosa	Rorug04G0133800
rosa_samantha	Rh4BG192800 Rh4DG191900
rosa_wichuraiana	Rw4G016520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2237
AccB1I	GGYRCC	1 cut(s)	2103
AccBSI	CCGCTC	2 cut(s)	467, 526
AccI	GTMKAC	1 cut(s)	1842
AccII	CGCG	2 cut(s)	195, 1267
AccIII	TCCGGA	1 cut(s)	1134
AclWI	GGATC	8 cut(s)	269, 383, 432, 1126, 1139, 2030, 2554, 2567
AcoI	YGGCCR	1 cut(s)	1903
AcsI	RAATTY	2 cut(s)	2078, 2300
AcuI	CTGAAG	1 cut(s)	364
AcvI	CACGTG	1 cut(s)	1527
AcyI	GRCGYC	1 cut(s)	1924
AfaI	GTAC	6 cut(s)	461, 905, 1246, 1403, 2360, 2407
AfiI	CCNNNNNNNGG	5 cut(s)	313, 482, 598, 943, 1792
AflIII	ACRYGT	2 cut(s)	1526, 2154
AgsI	TTSAA	5 cut(s)	64, 1253, 1433, 1571, 2350
AjnI	CCWGG	4 cut(s)	1397, 1563, 1668, 1698
AjuI	GAANNNNNNNTTGG	2 cut(s)	2044, 2076
Alw21I	GWGCWC	1 cut(s)	1817
Alw26I	GTCTC	7 cut(s)	272, 291, 357, 705, 2374, 2422, 2515
Alw44I	GTGCAC	1 cut(s)	1813
AlwI	GGATC	8 cut(s)	269, 383, 432, 1126, 1139, 2030, 2554, 2567
AlwNI	CAGNNNCTG	3 cut(s)	270, 2117, 2198
Ama87I	CYCGRG	2 cut(s)	370, 2136
Aor13HI	TCCGGA	1 cut(s)	1134
AoxI	GGCC	2 cut(s)	1903, 2267
ApaLI	GTGCAC	1 cut(s)	1813
ApeKI	GCWGC	1 cut(s)	758
ApoI	RAATTY	2 cut(s)	2078, 2300
ArsI	GACNNNNNNTTYG	2 cut(s)	1883, 1915
Asp700I	GAANNNNTTC	1 cut(s)	413
AspLEI	GCGC	1 cut(s)	766
AspS9I	GGNCC	1 cut(s)	2293
AsuC2I	CCSGG	1 cut(s)	809
AsuHPI	GGTGA	6 cut(s)	266, 560, 569, 797, 875, 2151
AsuII	TTCGAA	1 cut(s)	407
AvaI	CYCGRG	2 cut(s)	370, 2136
AvaII	GGWCC	1 cut(s)	2293
AxyI	CCTNAGG	1 cut(s)	2271
BaeGI	GKGCMC	4 cut(s)	1744, 1817, 2106, 2311
BalI	TGGCCA	1 cut(s)	1905
BamHI	GGATCC	2 cut(s)	1131, 2559
BanI	GGYRCC	1 cut(s)	2103
BarI	GAAGNNNNNNTAC	2 cut(s)	1003, 1035
BauI	CACGAG	3 cut(s)	283, 1578, 1976
BbrPI	CACGTG	1 cut(s)	1527
BbsI	GAAGAC	3 cut(s)	542, 1727, 1896
Bbv12I	GWGCWC	1 cut(s)	1817
BbvCI	CCTCAGC	1 cut(s)	656
BbvI	GCAGC	1 cut(s)	770
BccI	CCATC	8 cut(s)	326, 476, 928, 1342, 1698, 1803, 2242, 2456
BcgI	CGANNNNNNTGC	2 cut(s)	694, 728
BciT130I	CCWGG	4 cut(s)	1399, 1565, 1670, 1700
BciVI	GTATCC	2 cut(s)	330, 2448
BclI	TGATCA	1 cut(s)	1108
BcnI	CCSGG	1 cut(s)	809
BcoDI	GTCTC	7 cut(s)	272, 291, 357, 705, 2374, 2422, 2515
BfaI	CTAG	7 cut(s)	69, 477, 860, 1386, 1835, 2393, 2570
BfmI	CTRYAG	2 cut(s)	238, 1894
BfoI	RGCGCY	1 cut(s)	767
BfuI	GTATCC	2 cut(s)	330, 2448
BglII	AGATCT	1 cut(s)	1090
BisI	GCNGC	4 cut(s)	759, 762, 1709, 2267
BlsI	GCNGC	4 cut(s)	760, 763, 1710, 2268
Bme1390I	CCNGG	5 cut(s)	809, 1399, 1565, 1670, 1700
Bme18I	GGWCC	1 cut(s)	2293
BmeT110I	CYCGRG	2 cut(s)	370, 2136
BmgT120I	GGNCC	1 cut(s)	2293
BmiI	GGNNCC	6 cut(s)	973, 1133, 1778, 2105, 2294, 2561
BmrFI	CCNGG	5 cut(s)	809, 1399, 1565, 1670, 1700
BmrI	ACTGGG	1 cut(s)	9
BmsI	GCATC	4 cut(s)	822, 915, 1237, 1433
BmuI	ACTGGG	1 cut(s)	9
BpiI	GAAGAC	3 cut(s)	542, 1727, 1896
BpmI	CTGGAG	2 cut(s)	1082, 2199
Bpu10I	CCTNAGC	1 cut(s)	656
Bpu14I	TTCGAA	1 cut(s)	407
BpuEI	CTTGAG	2 cut(s)	329, 2249
BpuMI	CCSGG	1 cut(s)	809
Bsa29I	ATCGAT	1 cut(s)	923
BsaAI	YACGTR	1 cut(s)	1527
BsaHI	GRCGYC	1 cut(s)	1924
BsaI	GGTCTC	3 cut(s)	291, 705, 2422
BsaJI	CCNNGG	9 cut(s)	156, 371, 507, 1312, 1563, 1669, 1804, 2051, 2098
BsaWI	WCCGGW	4 cut(s)	127, 579, 591, 1134
BsaXI	ACNNNNNCTCC	8 cut(s)	430, 460, 1055, 1085, 1208, 1238, 1956, 1986
Bsc4I	CCNNNNNNNGG	5 cut(s)	313, 482, 598, 943, 1792
Bse1I	ACTGG	6 cut(s)	15, 937, 1133, 1464, 2245, 2286
Bse21I	CCTNAGG	1 cut(s)	2271
Bse3DI	GCAATG	2 cut(s)	1733, 1925
BseAI	TCCGGA	1 cut(s)	1134
BseBI	CCWGG	4 cut(s)	1399, 1565, 1670, 1700
BseCI	ATCGAT	1 cut(s)	923
BseDI	CCNNGG	9 cut(s)	156, 371, 507, 1312, 1563, 1669, 1804, 2051, 2098
BseGI	GGATG	4 cut(s)	337, 817, 1308, 1814
BseLI	CCNNNNNNNGG	5 cut(s)	313, 482, 598, 943, 1792
BseMI	GCAATG	2 cut(s)	1733, 1925
BseMII	CTCAG	8 cut(s)	194, 670, 678, 1646, 1809, 2071, 2262, 2417
BseNI	ACTGG	6 cut(s)	15, 937, 1133, 1464, 2245, 2286
BseRI	GAGGAG	2 cut(s)	375, 534
BseSI	GKGCMC	4 cut(s)	1744, 1817, 2106, 2311
BseXI	GCAGC	1 cut(s)	770
Bsh1236I	CGCG	2 cut(s)	195, 1267
BshFI	GGCC	2 cut(s)	1905, 2269
BshNI	GGYRCC	1 cut(s)	2103
BshVI	ATCGAT	1 cut(s)	923
BsiHKAI	GWGCWC	1 cut(s)	1817
BsiHKCI	CYCGRG	2 cut(s)	370, 2136
BsiSI	CCGG	5 cut(s)	128, 580, 592, 808, 1135
BslFI	GGGAC	2 cut(s)	1187, 2000
BslI	CCNNNNNNNGG	5 cut(s)	313, 482, 598, 943, 1792
BsmAI	GTCTC	7 cut(s)	272, 291, 357, 705, 2374, 2422, 2515
BsmBI	CGTCTC	1 cut(s)	2515
BsmFI	GGGAC	2 cut(s)	1187, 2000
BsmI	GAATGC	1 cut(s)	203
BsnI	GGCC	2 cut(s)	1905, 2269
Bso31I	GGTCTC	3 cut(s)	291, 705, 2422
BsoBI	CYCGRG	2 cut(s)	370, 2136
Bsp119I	TTCGAA	1 cut(s)	407
Bsp1286I	GDGCHC	4 cut(s)	1744, 1817, 2106, 2311
Bsp13I	TCCGGA	1 cut(s)	1134
Bsp1407I	TGTACA	4 cut(s)	459, 1244, 2358, 2405
Bsp19I	CCATGG	2 cut(s)	1312, 2098
Bsp68I	TCGCGA	2 cut(s)	195, 1267
BspANI	GGCC	2 cut(s)	1905, 2269
BspCNI	CTCAG	8 cut(s)	195, 669, 679, 1645, 1810, 2070, 2263, 2418
BspDI	ATCGAT	1 cut(s)	923
BspEI	TCCGGA	1 cut(s)	1134
BspFNI	CGCG	2 cut(s)	195, 1267
BspHI	TCATGA	1 cut(s)	613
BspLI	GGNNCC	6 cut(s)	973, 1133, 1778, 2105, 2294, 2561
BspMAI	CTGCAG	1 cut(s)	242
BspPI	GGATC	8 cut(s)	269, 383, 432, 1126, 1139, 2030, 2554, 2567
BspT104I	TTCGAA	1 cut(s)	407
BspT107I	GGYRCC	1 cut(s)	2103
BspTNI	GGTCTC	3 cut(s)	291, 705, 2422
BsrBI	CCGCTC	2 cut(s)	467, 526
BsrDI	GCAATG	2 cut(s)	1733, 1925
BsrGI	TGTACA	4 cut(s)	459, 1244, 2358, 2405
BsrI	ACTGG	6 cut(s)	15, 937, 1133, 1464, 2245, 2286
BssECI	CCNNGG	9 cut(s)	156, 371, 507, 1312, 1563, 1669, 1804, 2051, 2098
BssNI	GRCGYC	1 cut(s)	1924
BssSI	CACGAG	3 cut(s)	283, 1578, 1976
BssT1I	CCWWGG	5 cut(s)	156, 507, 1312, 2051, 2098
Bst2BI	CACGAG	3 cut(s)	283, 1578, 1976
Bst2UI	CCWGG	4 cut(s)	1399, 1565, 1670, 1700
Bst4CI	ACNGT	7 cut(s)	490, 786, 882, 1505, 2194, 2376, 2385
Bst6I	CTCTTC	1 cut(s)	2023
BstACI	GRCGYC	1 cut(s)	1924
BstAUI	TGTACA	4 cut(s)	459, 1244, 2358, 2405
BstBAI	YACGTR	1 cut(s)	1527
BstBI	TTCGAA	1 cut(s)	407
BstC8I	GCNNGC	4 cut(s)	242, 1378, 1740, 1953
BstDSI	CCRYGG	3 cut(s)	1312, 1804, 2098
BstF5I	GGATG	4 cut(s)	337, 817, 1308, 1814
BstFNI	CGCG	2 cut(s)	195, 1267
BstH2I	RGCGCY	1 cut(s)	767
BstHHI	GCGC	1 cut(s)	766
BstMAI	GTCTC	7 cut(s)	272, 291, 357, 705, 2374, 2422, 2515
BstMWI	GCNNNNNNNGC	5 cut(s)	666, 1386, 1739, 1869, 2275
BstNI	CCWGG	4 cut(s)	1399, 1565, 1670, 1700
BstNSI	RCATGY	2 cut(s)	649, 2158
BstSCI	CCNGG	5 cut(s)	807, 1397, 1563, 1668, 1698
BstSFI	CTRYAG	2 cut(s)	238, 1894
BstSLI	GKGCMC	4 cut(s)	1744, 1817, 2106, 2311
BstUI	CGCG	2 cut(s)	195, 1267
BstV1I	GCAGC	1 cut(s)	770
BstV2I	GAAGAC	3 cut(s)	542, 1727, 1896
BstX2I	RGATCY	4 cut(s)	375, 1090, 1131, 2559
BstYI	RGATCY	4 cut(s)	375, 1090, 1131, 2559
Bsu15I	ATCGAT	1 cut(s)	923
Bsu36I	CCTNAGG	1 cut(s)	2271
BsuI	GTATCC	2 cut(s)	330, 2448
BsuRI	GGCC	2 cut(s)	1905, 2269
BsuTUI	ATCGAT	1 cut(s)	923
BtgI	CCRYGG	3 cut(s)	1312, 1804, 2098
BtsCI	GGATG	4 cut(s)	337, 817, 1308, 1814
BtsI	GCAGTG	2 cut(s)	1419, 1519
BtsIMutI	CAGTG	9 cut(s)	424, 717, 1349, 1419, 1471, 1510, 1519, 1815, 2199
BtuMI	TCGCGA	2 cut(s)	195, 1267
Cac8I	GCNNGC	4 cut(s)	242, 1378, 1740, 1953
CaiI	CAGNNNCTG	3 cut(s)	270, 2117, 2198
CciI	TCATGA	1 cut(s)	613
CfoI	GCGC	1 cut(s)	766
Cfr13I	GGNCC	1 cut(s)	2293
ClaI	ATCGAT	1 cut(s)	923
CseI	GACGC	1 cut(s)	1913
CsiI	ACCWGGT	1 cut(s)	1397
Csp6I	GTAC	6 cut(s)	460, 904, 1245, 1402, 2359, 2406
CspCI	CAANNNNNGTGG	2 cut(s)	949, 984
CviQI	GTAC	6 cut(s)	460, 904, 1245, 1402, 2359, 2406
DraI	TTTAAA	2 cut(s)	1164, 2389
EaeI	YGGCCR	1 cut(s)	1903
Eam1104I	CTCTTC	1 cut(s)	2023
EarI	CTCTTC	1 cut(s)	2023
EciI	GGCGGA	2 cut(s)	563, 1769
Eco130I	CCWWGG	5 cut(s)	156, 507, 1312, 2051, 2098
Eco31I	GGTCTC	3 cut(s)	291, 705, 2422
Eco47I	GGWCC	1 cut(s)	2293
Eco57I	CTGAAG	1 cut(s)	364
Eco72I	CACGTG	1 cut(s)	1527
Eco81I	CCTNAGG	1 cut(s)	2271
Eco88I	CYCGRG	2 cut(s)	370, 2136
EcoRI	GAATTC	1 cut(s)	2078
EcoRII	CCWGG	4 cut(s)	1397, 1563, 1668, 1698
EcoT14I	CCWWGG	5 cut(s)	156, 507, 1312, 2051, 2098
ErhI	CCWWGG	5 cut(s)	156, 507, 1312, 2051, 2098
Esp3I	CGTCTC	1 cut(s)	2515
FalI	AAGNNNNNCTT	2 cut(s)	1143, 1175
FaqI	GGGAC	2 cut(s)	1187, 2000
FauI	CCCGC	1 cut(s)	1731
FbaI	TGATCA	1 cut(s)	1108
FblI	GTMKAC	1 cut(s)	1842
Fnu4HI	GCNGC	4 cut(s)	759, 762, 1709, 2267
FokI	GGATG	4 cut(s)	344, 824, 1295, 1821
Fsp4HI	GCNGC	4 cut(s)	759, 762, 1709, 2267
FspBI	CTAG	7 cut(s)	69, 477, 860, 1386, 1835, 2393, 2570
GlaI	GCGC	1 cut(s)	765
GluI	GCNGC	4 cut(s)	759, 762, 1709, 2267
GsuI	CTGGAG	2 cut(s)	1082, 2199
HaeII	RGCGCY	1 cut(s)	767
HaeIII	GGCC	2 cut(s)	1905, 2269
HapII	CCGG	5 cut(s)	128, 580, 592, 808, 1135
HgaI	GACGC	1 cut(s)	1913
HhaI	GCGC	1 cut(s)	766
Hin1I	GRCGYC	1 cut(s)	1924
Hin6I	GCGC	1 cut(s)	764
HinP1I	GCGC	1 cut(s)	764
HincII	GTYRAC	1 cut(s)	2257
HindII	GTYRAC	1 cut(s)	2257
HindIII	AAGCTT	3 cut(s)	997, 1157, 1534
HpaII	CCGG	5 cut(s)	128, 580, 592, 808, 1135
HphI	GGTGA	6 cut(s)	266, 560, 569, 797, 875, 2151
Hpy166II	GTNNAC	8 cut(s)	460, 1247, 1404, 1815, 1843, 2257, 2359, 2408
Hpy8I	GTNNAC	8 cut(s)	460, 1247, 1404, 1815, 1843, 2257, 2359, 2408
Hpy99I	CGWCG	2 cut(s)	116, 137
HpyAV	CCTTC	8 cut(s)	581, 729, 1074, 1145, 1630, 1767, 1874, 2362
HpyCH4III	ACNGT	7 cut(s)	490, 786, 882, 1505, 2194, 2376, 2385
HpyCH4IV	ACGT	2 cut(s)	1035, 1526
HpyF10VI	GCNNNNNNNGC	5 cut(s)	666, 1386, 1739, 1869, 2275
HpySE526I	ACGT	2 cut(s)	1035, 1526
Hsp92I	GRCGYC	1 cut(s)	1924
HspAI	GCGC	1 cut(s)	764
Kpn2I	TCCGGA	1 cut(s)	1134
Ksp22I	TGATCA	1 cut(s)	1108
LmnI	GCTCC	5 cut(s)	391, 727, 1782, 1806, 2417
Lsp1109I	GCAGC	1 cut(s)	770
LweI	GCATC	4 cut(s)	822, 915, 1237, 1433
MabI	ACCWGGT	1 cut(s)	1397
MaeI	CTAG	7 cut(s)	69, 477, 860, 1386, 1835, 2393, 2570
MaeII	ACGT	2 cut(s)	1035, 1526
MaeIII	GTNAC	9 cut(s)	231, 272, 575, 863, 1456, 2113, 2150, 2157, 2194
MbiI	CCGCTC	2 cut(s)	467, 526
MboII	GAAGA	7 cut(s)	370, 547, 767, 1732, 1901, 2010, 2525
MfeI	CAATTG	1 cut(s)	721
MflI	RGATCY	4 cut(s)	375, 1090, 1131, 2559
MhlI	GDGCHC	4 cut(s)	1744, 1817, 2106, 2311
MlsI	TGGCCA	1 cut(s)	1905
MluNI	TGGCCA	1 cut(s)	1905
MlyI	GAGTC	2 cut(s)	214, 239
MmeI	TCCRAC	4 cut(s)	337, 728, 768, 1564
Mox20I	TGGCCA	1 cut(s)	1905
MroI	TCCGGA	1 cut(s)	1134
MroXI	GAANNNNTTC	1 cut(s)	413
MscI	TGGCCA	1 cut(s)	1905
MseI	TTAA	6 cut(s)	596, 849, 1163, 1761, 2388, 2553
MslI	CAYNNNNRTG	4 cut(s)	213, 810, 849, 2164
Msp20I	TGGCCA	1 cut(s)	1905
MspA1I	CMGCKG	2 cut(s)	761, 1490
MspI	CCGG	5 cut(s)	128, 580, 592, 808, 1135
MspR9I	CCNGG	5 cut(s)	809, 1399, 1565, 1670, 1700
MssI	GTTTAAAC	1 cut(s)	2389
MunI	CAATTG	1 cut(s)	721
Mva1269I	GAATGC	1 cut(s)	203
MvaI	CCWGG	4 cut(s)	1399, 1565, 1670, 1700
MvnI	CGCG	2 cut(s)	195, 1267
MwoI	GCNNNNNNNGC	5 cut(s)	666, 1386, 1739, 1869, 2275
NciI	CCSGG	1 cut(s)	809
NcoI	CCATGG	2 cut(s)	1312, 2098
NlaIV	GGNNCC	6 cut(s)	973, 1133, 1778, 2105, 2294, 2561
NmeAIII	GCCGAG	1 cut(s)	835
NmuCI	GTSAC	7 cut(s)	231, 272, 575, 863, 1456, 2157, 2194
NruI	TCGCGA	2 cut(s)	195, 1267
NspI	RCATGY	2 cut(s)	649, 2158
NspV	TTCGAA	1 cut(s)	407
PaeR7I	CTCGAG	1 cut(s)	2136
PagI	TCATGA	1 cut(s)	613
PciI	ACATGT	1 cut(s)	2154
PctI	GAATGC	1 cut(s)	203
PdmI	GAANNNNTTC	1 cut(s)	413
PflFI	GACNNNGTC	2 cut(s)	116, 353
PkrI	GCNGC	4 cut(s)	760, 763, 1710, 2268
PleI	GAGTC	2 cut(s)	213, 238
PmaCI	CACGTG	1 cut(s)	1527
PmeI	GTTTAAAC	1 cut(s)	2389
PmlI	CACGTG	1 cut(s)	1527
PpsI	GAGTC	2 cut(s)	213, 238
Ppu21I	YACGTR	1 cut(s)	1527
PscI	ACATGT	1 cut(s)	2154
PsiI	TTATAA	1 cut(s)	2237
Psp6I	CCWGG	4 cut(s)	1397, 1563, 1668, 1698
PspCI	CACGTG	1 cut(s)	1527
PspGI	CCWGG	4 cut(s)	1397, 1563, 1668, 1698
PspN4I	GGNNCC	6 cut(s)	973, 1133, 1778, 2105, 2294, 2561
PspPI	GGNCC	1 cut(s)	2293
PspXI	VCTCGAGB	1 cut(s)	2136
PstI	CTGCAG	1 cut(s)	242
PstNI	CAGNNNCTG	3 cut(s)	270, 2117, 2198
PsuI	RGATCY	4 cut(s)	375, 1090, 1131, 2559
PsyI	GACNNNGTC	2 cut(s)	116, 353
RruI	TCGCGA	2 cut(s)	195, 1267
RsaI	GTAC	6 cut(s)	461, 905, 1246, 1403, 2360, 2407
RsaNI	GTAC	6 cut(s)	460, 904, 1245, 1402, 2359, 2406
RseI	CAYNNNNRTG	4 cut(s)	213, 810, 849, 2164
SaqAI	TTAA	6 cut(s)	596, 849, 1163, 1761, 2388, 2553
SatI	GCNGC	4 cut(s)	759, 762, 1709, 2267
Sau96I	GGNCC	1 cut(s)	2293
SchI	GAGTC	2 cut(s)	214, 239
ScrFI	CCNGG	5 cut(s)	809, 1399, 1565, 1670, 1700
SduI	GDGCHC	4 cut(s)	1744, 1817, 2106, 2311
SexAI	ACCWGGT	1 cut(s)	1397
SfaNI	GCATC	4 cut(s)	822, 915, 1237, 1433
SfcI	CTRYAG	2 cut(s)	238, 1894
Sfr274I	CTCGAG	1 cut(s)	2136
SfuI	TTCGAA	1 cut(s)	407
SinI	GGWCC	1 cut(s)	2293
SlaI	CTCGAG	1 cut(s)	2136
SmiMI	CAYNNNNRTG	4 cut(s)	213, 810, 849, 2164
SmlI	CTYRAG	3 cut(s)	344, 2136, 2228
SmoI	CTYRAG	3 cut(s)	344, 2136, 2228
SspMI	CTAG	7 cut(s)	69, 477, 860, 1386, 1835, 2393, 2570
StyD4I	CCNGG	5 cut(s)	807, 1397, 1563, 1668, 1698
StyI	CCWWGG	5 cut(s)	156, 507, 1312, 2051, 2098
TaaI	ACNGT	7 cut(s)	490, 786, 882, 1505, 2194, 2376, 2385
TaiI	ACGT	2 cut(s)	1038, 1529
TaqI	TCGA	6 cut(s)	120, 407, 531, 923, 1125, 2137
TaqII	GACCGA	1 cut(s)	2446
TatI	WGTACW	4 cut(s)	459, 1244, 2358, 2405
TauI	GCSGC	3 cut(s)	764, 1711, 2269
Tru1I	TTAA	6 cut(s)	596, 849, 1163, 1761, 2388, 2553
Tru9I	TTAA	6 cut(s)	596, 849, 1163, 1761, 2388, 2553
TscAI	CASTG	9 cut(s)	424, 717, 1349, 1426, 1471, 1510, 1519, 1822, 2199
TseFI	GTSAC	7 cut(s)	231, 272, 575, 863, 1456, 2157, 2194
TseI	GCWGC	1 cut(s)	758
Tsp45I	GTSAC	7 cut(s)	231, 272, 575, 863, 1456, 2157, 2194
TspGWI	ACGGA	5 cut(s)	1793, 2104, 2285, 2326, 2498
TspRI	CASTG	9 cut(s)	424, 717, 1349, 1426, 1471, 1510, 1519, 1822, 2199
Tth111I	GACNNNGTC	2 cut(s)	116, 353
VneI	GTGCAC	1 cut(s)	1813
VpaK11BI	GGWCC	1 cut(s)	2293
XapI	RAATTY	2 cut(s)	2078, 2300
XceI	RCATGY	2 cut(s)	649, 2158
XcmI	CCANNNNNNNNNTGG	2 cut(s)	308, 1278
XhoI	CTCGAG	1 cut(s)	2136
XmiI	GTMKAC	1 cut(s)	1842
XmnI	GAANNNNTTC	1 cut(s)	413
XspI	CTAG	7 cut(s)	69, 477, 860, 1386, 1835, 2393, 2570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.