Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0016104

Physical Location & Seq

Genomic Coordinates Forward (+)

37672861 .. 37675917

Gene Structure 3057 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G016520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2496 bp

ATGCCCACCACCACCATGCAGCTGAACCACCTCTGCTTCATTTTGCCACCAGACTGCGACGAAGTCGAGCCACCGGACGACGAAAACCAGCAAAAACCCACCAAGGAGGTGTTAGAGGTCAGAAAGAATCACACCTGTCGCGAATGCCTGAGTCATGTTCGTGCTTTCGTCAAAGAGTCACTCTGCAGGCTCTACGACCTGAAATGGATCAGTCTCTGTCACCATGACACGAGAAAAAACCGAGACCAGCACCATTCTGGGGTGTTTCAGGACATGGATGGGATACAACTCAAGGACAAGGTCGGAGGAGACAACCCGAGGATCTTCAGCTTCTCGGAGCTTTATATTGGTTCGAATGGTTTCAGTGAGGATCAAGTTTTAGGGAGTGGAGGTTTTGGGAAAGTGTACAGAGCGGTTCTGCCTAGTGATGGAACTGTTGTTGCTGTGAAGTCCTTGGTGGAGAGAGGAGAGCGGTTCGAGAAGACTTTTGTGGCGGAGTTGGTTGCGGTGGCTCACCTTCGTCACCGGAATCTTGTCCGGTTAAGGGGGTGGTGTGTTCATGAAAAAGAGCTGTTTTTGGTTTATGACTACATGCCGAACCTCAGCCTTGACCGCATACTTTTCAGGAAACCTGAGAATATAGGGTCTCCGACATCAGTGCCTCTCAATTGGGAGCGTAGAAGGAACATAATCGGTGGCTTGGCAGCGGCGCTTTACTATCTTCACGAACAGTTGGAAACTCAAATCATTCACCGGGATGTCAAGACGAGTAATGTGATGCTTGATTCCCATTTTAATGCTCGGCTAGGTGACTTTGGCTTGGCACGGTGGCTGGAACATGAAATTGAGTACGAGATAAAGACACCATCGATGCAAAACCACCAGTTTCGGGTGGCAGAAACGACCAAAATTGGTGGAACAATAGGGTATTTGCCACCTGAAAGCTTCCAGAAACGAAGCGTGGCTACTGCAAAATCTGACGTTTTCAGCTTTGGGATTGTTGTTCTGGAGGTGGTGTCGGGTAGAAGGGCAGTAGATCTCACTTGTCCAGATGATCAGATCATATTGCTCGACTGGATCCGGAAGCTGTCTGATGAAGGGAAGCTTTTAAAAGCAAGGGACAAGAGGATTCCAGACGGGTCTTATCAGCTTCTTGACATGGAGTATCAGTTGCATCTTGCACTTCTTTGTACACTTCAAAATCCACAATCGCGACCAAACATGAAATGGGTTGTGGAAGCACTTTCTGGCAACATCCATGGCAAATTGCCAAGCCTCCCATCGTTTCAGTGCCACCCTCTCTACATCTCTCTATCCTCTGCCAGCAATACTAGCACAAACACCAGGTACACCATAGCCACCACCACTGCATCTCTTGAATCATCTATTCTATCAACCTATGTCACAGCCAGTGGAGAAACCATATATGCAACCGCTGACAATGGAAACAGTGGAAGCAGTGAGGTCAGCACGTGTGAAAGCTTCCGACATAAGAAACCAACATTTCCCCTGGTTGAAACTCCACGAGAAATATCCTACATGGAAATTGTATCTGCCACAAATAATTTCGCAGATTCTCAGAAGGTAGCAGAGCTGGACTTTGGAACAGCCTACCAGGGTTTTCTCAACAACCGCCATCATGTCCTGGTAAAGCGGCTTGGAATGAAGACTTGCCCTGCATTGCGGGCACGATTCTCAAATGAACTTAAAAACTTGGGAAGGCTCCGCCACCGAAACTTGGTTCAGCTCCGTGGATGGTGCACTGAGCAAGGAGAAATGCTAGTTGTCTACGATTACTTAGCTGATCGCCTTCTAAGCCACCTACTTTTTCGTGAAGACTACAGATTTGGCCACTCAATCCTGCAATGGCGTCATAGATACAACATTATCAAATCGCTTGCTTCTGCGATTCTTTATCTCCACGAGGAATGGGACGAACAAGTTATTCACAGAAACATTACCTCTTCTGCTGTAATTCTTGATCCAGACATGAACCCAAGGCTCAGTTCTTTCGCCCTTGCTGAATTCTTGACACGGAACGACCATGGGCACCATGCAGTTACTGACACAAGCAAATCTGCTCGAGGGATTTTTGGTTACATGTCACCTGAATGTATGGAATCTGGAGAAGCAACCACAGTGACTGACATATACAGCTTTGGTGTAGTAATACTTGAGGTTATAACTGGACAGATGGCAGTTGACTTTCGGCGGCCTGAGGTGCTACTGGTCAAGAGGGTCCGTGAATTTGCGGCACGGAAAAAGACTTTAGAGGATATGGCAGATTTTAGGTTGAATGGAGTGTACAATCAGAAGGAACTGTTGACACTGTTTAAACTAGGAATTGCTTGTACACGCTCCAATCCTCAACTGAGACCGAGCATGAGGCAGATTGTAAGGATACTTGATGGGAATGACAAATGCTTGACGGAAATATGCAAAAAGGACGAAAGTGGGGAAGAATGGAGACGAGTGAATGATTTGCTTTGTCGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0008150 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009987 GO:0010033 GO:0014070 GO:0016020 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0043207 GO:0044464 GO:0046677 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

831

Amino Acids

94.78

Weight (kDa)

7.37

Isoelectric Point (pI)

41.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	122 - 346	1.1e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	124 - 414	7.7e-36	Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr	PF07714	527 - 802	2.3e-30	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	533 - 799	1.8e-24	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016104)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32800
fragaria_vesca	FvH4_4g14630 FvH4_4g15750 FvH4_5g04690
malus_domestica	MD04G1008600.v1.1
prunus_persica	Prupe.1G007200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0415351
rosa_laevigata	RLG00000008076
rosa_multiflora	Rmu_sc0013726.1_g000001 Rmu_sc0028326.1_g000002
rosa_roxburghii	Rroxscaffold_5G00359130
rosa_rugosa	Rorug04G0133800
rosa_samantha	Rh4BG192800 Rh4DG191900
rosa_wichuraiana	Rw4G016520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2183
AccB1I	GGYRCC	1 cut(s)	2049
AccBSI	CCGCTC	2 cut(s)	413, 472
AccI	GTMKAC	1 cut(s)	1788
AccII	CGCG	2 cut(s)	141, 1213
AccIII	TCCGGA	1 cut(s)	1080
AclWI	GGATC	6 cut(s)	215, 329, 378, 1072, 1085, 1976
AcoI	YGGCCR	1 cut(s)	1849
AcsI	RAATTY	2 cut(s)	2024, 2246
AcuI	CTGAAG	1 cut(s)	310
AcvI	CACGTG	1 cut(s)	1473
AcyI	GRCGYC	1 cut(s)	1870
AfaI	GTAC	6 cut(s)	407, 851, 1192, 1349, 2306, 2353
AfiI	CCNNNNNNNGG	5 cut(s)	259, 428, 544, 889, 1738
AflIII	ACRYGT	2 cut(s)	1472, 2100
AgsI	TTSAA	4 cut(s)	1199, 1379, 1517, 2296
AjnI	CCWGG	4 cut(s)	1343, 1509, 1614, 1644
AjuI	GAANNNNNNNTTGG	2 cut(s)	1990, 2022
Alw21I	GWGCWC	1 cut(s)	1763
Alw26I	GTCTC	6 cut(s)	218, 237, 303, 651, 2368, 2461
Alw44I	GTGCAC	1 cut(s)	1759
AlwI	GGATC	6 cut(s)	215, 329, 378, 1072, 1085, 1976
AlwNI	CAGNNNCTG	3 cut(s)	216, 2063, 2144
Ama87I	CYCGRG	2 cut(s)	316, 2082
Aor13HI	TCCGGA	1 cut(s)	1080
AoxI	GGCC	2 cut(s)	1849, 2213
ApaLI	GTGCAC	1 cut(s)	1759
ApeKI	GCWGC	2 cut(s)	19, 704
ApoI	RAATTY	2 cut(s)	2024, 2246
ArsI	GACNNNNNNTTYG	2 cut(s)	1829, 1861
Asp700I	GAANNNNTTC	1 cut(s)	359
AspLEI	GCGC	1 cut(s)	712
AspS9I	GGNCC	1 cut(s)	2239
AsuC2I	CCSGG	1 cut(s)	755
AsuHPI	GGTGA	6 cut(s)	212, 506, 515, 743, 821, 2097
AsuII	TTCGAA	1 cut(s)	353
AvaI	CYCGRG	2 cut(s)	316, 2082
AvaII	GGWCC	1 cut(s)	2239
AxyI	CCTNAGG	1 cut(s)	2217
BaeGI	GKGCMC	3 cut(s)	1690, 1763, 2052
BalI	TGGCCA	1 cut(s)	1851
BamHI	GGATCC	1 cut(s)	1077
BanI	GGYRCC	1 cut(s)	2049
BarI	GAAGNNNNNNTAC	2 cut(s)	949, 981
BauI	CACGAG	3 cut(s)	229, 1524, 1922
BbrPI	CACGTG	1 cut(s)	1473
BbsI	GAAGAC	3 cut(s)	488, 1673, 1842
Bbv12I	GWGCWC	1 cut(s)	1763
BbvCI	CCTCAGC	1 cut(s)	602
BbvI	GCAGC	2 cut(s)	31, 716
BccI	CCATC	8 cut(s)	272, 422, 874, 1288, 1644, 1749, 2188, 2402
BcgI	CGANNNNNNTGC	2 cut(s)	640, 674
BciT130I	CCWGG	4 cut(s)	1345, 1511, 1616, 1646
BciVI	GTATCC	2 cut(s)	276, 2394
BclI	TGATCA	1 cut(s)	1054
BcnI	CCSGG	1 cut(s)	755
BcoDI	GTCTC	6 cut(s)	218, 237, 303, 651, 2368, 2461
BfaI	CTAG	5 cut(s)	423, 806, 1332, 1781, 2339
BfmI	CTRYAG	2 cut(s)	184, 1840
BfoI	RGCGCY	1 cut(s)	713
BfuI	GTATCC	2 cut(s)	276, 2394
BglII	AGATCT	1 cut(s)	1036
BisI	GCNGC	6 cut(s)	20, 705, 708, 1655, 2213, 2253
BlsI	GCNGC	6 cut(s)	21, 706, 709, 1656, 2214, 2254
Bme1390I	CCNGG	5 cut(s)	755, 1345, 1511, 1616, 1646
Bme18I	GGWCC	1 cut(s)	2239
BmeT110I	CYCGRG	2 cut(s)	316, 2082
BmgT120I	GGNCC	1 cut(s)	2239
BmiI	GGNNCC	4 cut(s)	1079, 1724, 2051, 2240
BmrFI	CCNGG	5 cut(s)	755, 1345, 1511, 1616, 1646
BmsI	GCATC	4 cut(s)	768, 861, 1183, 1379
BpiI	GAAGAC	3 cut(s)	488, 1673, 1842
BpmI	CTGGAG	2 cut(s)	1028, 2145
Bpu10I	CCTNAGC	1 cut(s)	602
Bpu14I	TTCGAA	1 cut(s)	353
BpuEI	CTTGAG	2 cut(s)	275, 2195
BpuMI	CCSGG	1 cut(s)	755
Bsa29I	ATCGAT	1 cut(s)	869
BsaAI	YACGTR	1 cut(s)	1473
BsaHI	GRCGYC	1 cut(s)	1870
BsaI	GGTCTC	3 cut(s)	237, 651, 2368
BsaJI	CCNNGG	9 cut(s)	102, 317, 453, 1258, 1509, 1615, 1750, 1997, 2044
BsaWI	WCCGGW	4 cut(s)	73, 525, 537, 1080
BsaXI	ACNNNNNCTCC	6 cut(s)	376, 406, 1001, 1031, 1154, 1184
Bsc4I	CCNNNNNNNGG	5 cut(s)	259, 428, 544, 889, 1738
Bse1I	ACTGG	5 cut(s)	883, 1079, 1410, 2191, 2232
Bse21I	CCTNAGG	1 cut(s)	2217
Bse3DI	GCAATG	2 cut(s)	1679, 1871
BseAI	TCCGGA	1 cut(s)	1080
BseBI	CCWGG	4 cut(s)	1345, 1511, 1616, 1646
BseCI	ATCGAT	1 cut(s)	869
BseDI	CCNNGG	9 cut(s)	102, 317, 453, 1258, 1509, 1615, 1750, 1997, 2044
BseGI	GGATG	4 cut(s)	283, 763, 1254, 1760
BseLI	CCNNNNNNNGG	5 cut(s)	259, 428, 544, 889, 1738
BseMI	GCAATG	2 cut(s)	1679, 1871
BseMII	CTCAG	8 cut(s)	140, 616, 624, 1592, 1755, 2017, 2208, 2363
BseNI	ACTGG	5 cut(s)	883, 1079, 1410, 2191, 2232
BseRI	GAGGAG	2 cut(s)	321, 480
BseSI	GKGCMC	3 cut(s)	1690, 1763, 2052
BseXI	GCAGC	2 cut(s)	31, 716
Bsh1236I	CGCG	2 cut(s)	141, 1213
BshFI	GGCC	2 cut(s)	1851, 2215
BshNI	GGYRCC	1 cut(s)	2049
BshVI	ATCGAT	1 cut(s)	869
BsiHKAI	GWGCWC	1 cut(s)	1763
BsiHKCI	CYCGRG	2 cut(s)	316, 2082
BsiSI	CCGG	5 cut(s)	74, 526, 538, 754, 1081
BslFI	GGGAC	2 cut(s)	1133, 1946
BslI	CCNNNNNNNGG	5 cut(s)	259, 428, 544, 889, 1738
BsmAI	GTCTC	6 cut(s)	218, 237, 303, 651, 2368, 2461
BsmBI	CGTCTC	1 cut(s)	2461
BsmFI	GGGAC	2 cut(s)	1133, 1946
BsmI	GAATGC	1 cut(s)	149
BsnI	GGCC	2 cut(s)	1851, 2215
Bso31I	GGTCTC	3 cut(s)	237, 651, 2368
BsoBI	CYCGRG	2 cut(s)	316, 2082
Bsp119I	TTCGAA	1 cut(s)	353
Bsp1286I	GDGCHC	3 cut(s)	1690, 1763, 2052
Bsp13I	TCCGGA	1 cut(s)	1080
Bsp1407I	TGTACA	4 cut(s)	405, 1190, 2304, 2351
Bsp143I	GATC	9 cut(s)	207, 321, 370, 1036, 1054, 1059, 1077, 1804, 1981
Bsp19I	CCATGG	2 cut(s)	1258, 2044
Bsp68I	TCGCGA	2 cut(s)	141, 1213
BspANI	GGCC	2 cut(s)	1851, 2215
BspCNI	CTCAG	8 cut(s)	141, 615, 625, 1591, 1756, 2016, 2209, 2364
BspDI	ATCGAT	1 cut(s)	869
BspEI	TCCGGA	1 cut(s)	1080
BspFNI	CGCG	2 cut(s)	141, 1213
BspHI	TCATGA	1 cut(s)	559
BspLI	GGNNCC	4 cut(s)	1079, 1724, 2051, 2240
BspMAI	CTGCAG	1 cut(s)	188
BspPI	GGATC	6 cut(s)	215, 329, 378, 1072, 1085, 1976
BspT104I	TTCGAA	1 cut(s)	353
BspT107I	GGYRCC	1 cut(s)	2049
BspTNI	GGTCTC	3 cut(s)	237, 651, 2368
BsrBI	CCGCTC	2 cut(s)	413, 472
BsrDI	GCAATG	2 cut(s)	1679, 1871
BsrGI	TGTACA	4 cut(s)	405, 1190, 2304, 2351
BsrI	ACTGG	5 cut(s)	883, 1079, 1410, 2191, 2232
BssECI	CCNNGG	9 cut(s)	102, 317, 453, 1258, 1509, 1615, 1750, 1997, 2044
BssMI	GATC	9 cut(s)	207, 321, 370, 1036, 1054, 1059, 1077, 1804, 1981
BssNI	GRCGYC	1 cut(s)	1870
BssSI	CACGAG	3 cut(s)	229, 1524, 1922
BssT1I	CCWWGG	5 cut(s)	102, 453, 1258, 1997, 2044
Bst2BI	CACGAG	3 cut(s)	229, 1524, 1922
Bst2UI	CCWGG	4 cut(s)	1345, 1511, 1616, 1646
Bst4CI	ACNGT	7 cut(s)	436, 732, 828, 1451, 2140, 2322, 2331
Bst6I	CTCTTC	1 cut(s)	1969
BstACI	GRCGYC	1 cut(s)	1870
BstAUI	TGTACA	4 cut(s)	405, 1190, 2304, 2351
BstBAI	YACGTR	1 cut(s)	1473
BstBI	TTCGAA	1 cut(s)	353
BstC8I	GCNNGC	4 cut(s)	188, 1324, 1686, 1899
BstDSI	CCRYGG	3 cut(s)	1258, 1750, 2044
BstF5I	GGATG	4 cut(s)	283, 763, 1254, 1760
BstFNI	CGCG	2 cut(s)	141, 1213
BstH2I	RGCGCY	1 cut(s)	713
BstHHI	GCGC	1 cut(s)	712
BstKTI	GATC	9 cut(s)	210, 324, 373, 1039, 1057, 1062, 1080, 1807, 1984
BstMAI	GTCTC	6 cut(s)	218, 237, 303, 651, 2368, 2461
BstMBI	GATC	9 cut(s)	207, 321, 370, 1036, 1054, 1059, 1077, 1804, 1981
BstMWI	GCNNNNNNNGC	5 cut(s)	612, 1332, 1685, 1815, 2221
BstNI	CCWGG	4 cut(s)	1345, 1511, 1616, 1646
BstNSI	RCATGY	2 cut(s)	595, 2104
BstSCI	CCNGG	5 cut(s)	753, 1343, 1509, 1614, 1644
BstSFI	CTRYAG	2 cut(s)	184, 1840
BstSLI	GKGCMC	3 cut(s)	1690, 1763, 2052
BstUI	CGCG	2 cut(s)	141, 1213
BstV1I	GCAGC	2 cut(s)	31, 716
BstV2I	GAAGAC	3 cut(s)	488, 1673, 1842
BstX2I	RGATCY	3 cut(s)	321, 1036, 1077
BstYI	RGATCY	3 cut(s)	321, 1036, 1077
Bsu15I	ATCGAT	1 cut(s)	869
Bsu36I	CCTNAGG	1 cut(s)	2217
BsuI	GTATCC	2 cut(s)	276, 2394
BsuRI	GGCC	2 cut(s)	1851, 2215
BsuTUI	ATCGAT	1 cut(s)	869
BtgI	CCRYGG	3 cut(s)	1258, 1750, 2044
BtsCI	GGATG	4 cut(s)	283, 763, 1254, 1760
BtsI	GCAGTG	2 cut(s)	1365, 1465
BtuMI	TCGCGA	2 cut(s)	141, 1213
Cac8I	GCNNGC	4 cut(s)	188, 1324, 1686, 1899
CaiI	CAGNNNCTG	3 cut(s)	216, 2063, 2144
CciI	TCATGA	1 cut(s)	559
CfoI	GCGC	1 cut(s)	712
Cfr13I	GGNCC	1 cut(s)	2239
ClaI	ATCGAT	1 cut(s)	869
CseI	GACGC	1 cut(s)	1859
CsiI	ACCWGGT	1 cut(s)	1343
Csp6I	GTAC	6 cut(s)	406, 850, 1191, 1348, 2305, 2352
CspCI	CAANNNNNGTGG	2 cut(s)	895, 930
CviQI	GTAC	6 cut(s)	406, 850, 1191, 1348, 2305, 2352
DpnI	GATC	9 cut(s)	209, 323, 372, 1038, 1056, 1061, 1079, 1806, 1983
DpnII	GATC	9 cut(s)	207, 321, 370, 1036, 1054, 1059, 1077, 1804, 1981
DraI	TTTAAA	2 cut(s)	1110, 2335
EaeI	YGGCCR	1 cut(s)	1849
Eam1104I	CTCTTC	1 cut(s)	1969
EarI	CTCTTC	1 cut(s)	1969
EciI	GGCGGA	2 cut(s)	509, 1715
Eco130I	CCWWGG	5 cut(s)	102, 453, 1258, 1997, 2044
Eco31I	GGTCTC	3 cut(s)	237, 651, 2368
Eco47I	GGWCC	1 cut(s)	2239
Eco57I	CTGAAG	1 cut(s)	310
Eco72I	CACGTG	1 cut(s)	1473
Eco81I	CCTNAGG	1 cut(s)	2217
Eco88I	CYCGRG	2 cut(s)	316, 2082
EcoRI	GAATTC	1 cut(s)	2024
EcoRII	CCWGG	4 cut(s)	1343, 1509, 1614, 1644
EcoT14I	CCWWGG	5 cut(s)	102, 453, 1258, 1997, 2044
ErhI	CCWWGG	5 cut(s)	102, 453, 1258, 1997, 2044
Esp3I	CGTCTC	1 cut(s)	2461
FalI	AAGNNNNNCTT	2 cut(s)	1089, 1121
FaqI	GGGAC	2 cut(s)	1133, 1946
FauI	CCCGC	1 cut(s)	1677
FbaI	TGATCA	1 cut(s)	1054
FblI	GTMKAC	1 cut(s)	1788
Fnu4HI	GCNGC	6 cut(s)	20, 705, 708, 1655, 2213, 2253
FokI	GGATG	4 cut(s)	290, 770, 1241, 1767
Fsp4HI	GCNGC	6 cut(s)	20, 705, 708, 1655, 2213, 2253
FspBI	CTAG	5 cut(s)	423, 806, 1332, 1781, 2339
GlaI	GCGC	1 cut(s)	711
GluI	GCNGC	6 cut(s)	20, 705, 708, 1655, 2213, 2253
GsuI	CTGGAG	2 cut(s)	1028, 2145
HaeII	RGCGCY	1 cut(s)	713
HaeIII	GGCC	2 cut(s)	1851, 2215
HapII	CCGG	5 cut(s)	74, 526, 538, 754, 1081
HgaI	GACGC	1 cut(s)	1859
HhaI	GCGC	1 cut(s)	712
Hin1I	GRCGYC	1 cut(s)	1870
Hin6I	GCGC	1 cut(s)	710
HinP1I	GCGC	1 cut(s)	710
HincII	GTYRAC	2 cut(s)	2203, 2325
HindII	GTYRAC	2 cut(s)	2203, 2325
HindIII	AAGCTT	3 cut(s)	943, 1103, 1480
HpaII	CCGG	5 cut(s)	74, 526, 538, 754, 1081
HphI	GGTGA	6 cut(s)	212, 506, 515, 743, 821, 2097
Hpy166II	GTNNAC	9 cut(s)	406, 1193, 1350, 1761, 1789, 2203, 2305, 2325, 2354
Hpy8I	GTNNAC	9 cut(s)	406, 1193, 1350, 1761, 1789, 2203, 2305, 2325, 2354
Hpy99I	CGWCG	2 cut(s)	62, 83
HpyAV	CCTTC	8 cut(s)	527, 675, 1020, 1091, 1576, 1713, 1820, 2308
HpyCH4III	ACNGT	7 cut(s)	436, 732, 828, 1451, 2140, 2322, 2331
HpyCH4IV	ACGT	2 cut(s)	981, 1472
HpyF10VI	GCNNNNNNNGC	5 cut(s)	612, 1332, 1685, 1815, 2221
HpySE526I	ACGT	2 cut(s)	981, 1472
Hsp92I	GRCGYC	1 cut(s)	1870
HspAI	GCGC	1 cut(s)	710
Kpn2I	TCCGGA	1 cut(s)	1080
Ksp22I	TGATCA	1 cut(s)	1054
Kzo9I	GATC	9 cut(s)	207, 321, 370, 1036, 1054, 1059, 1077, 1804, 1981
LmnI	GCTCC	5 cut(s)	337, 673, 1728, 1752, 2363
Lsp1109I	GCAGC	2 cut(s)	31, 716
LweI	GCATC	4 cut(s)	768, 861, 1183, 1379
MabI	ACCWGGT	1 cut(s)	1343
MaeI	CTAG	5 cut(s)	423, 806, 1332, 1781, 2339
MaeII	ACGT	2 cut(s)	981, 1472
MaeIII	GTNAC	9 cut(s)	177, 218, 521, 809, 1402, 2059, 2096, 2103, 2140
MalI	GATC	9 cut(s)	209, 323, 372, 1038, 1056, 1061, 1079, 1806, 1983
MbiI	CCGCTC	2 cut(s)	413, 472
MboI	GATC	9 cut(s)	207, 321, 370, 1036, 1054, 1059, 1077, 1804, 1981
MboII	GAAGA	7 cut(s)	316, 493, 713, 1678, 1847, 1956, 2471
MfeI	CAATTG	1 cut(s)	667
MflI	RGATCY	3 cut(s)	321, 1036, 1077
MhlI	GDGCHC	3 cut(s)	1690, 1763, 2052
MlsI	TGGCCA	1 cut(s)	1851
MluNI	TGGCCA	1 cut(s)	1851
MlyI	GAGTC	2 cut(s)	160, 185
MmeI	TCCRAC	4 cut(s)	283, 674, 714, 1510
Mox20I	TGGCCA	1 cut(s)	1851
MroI	TCCGGA	1 cut(s)	1080
MroXI	GAANNNNTTC	1 cut(s)	359
MscI	TGGCCA	1 cut(s)	1851
MseI	TTAA	5 cut(s)	542, 795, 1109, 1707, 2334
MslI	CAYNNNNRTG	5 cut(s)	14, 159, 756, 795, 2110
Msp20I	TGGCCA	1 cut(s)	1851
MspA1I	CMGCKG	3 cut(s)	22, 707, 1436
MspI	CCGG	5 cut(s)	74, 526, 538, 754, 1081
MspR9I	CCNGG	5 cut(s)	755, 1345, 1511, 1616, 1646
MssI	GTTTAAAC	1 cut(s)	2335
MunI	CAATTG	1 cut(s)	667
Mva1269I	GAATGC	1 cut(s)	149
MvaI	CCWGG	4 cut(s)	1345, 1511, 1616, 1646
MvnI	CGCG	2 cut(s)	141, 1213
MwoI	GCNNNNNNNGC	5 cut(s)	612, 1332, 1685, 1815, 2221
NciI	CCSGG	1 cut(s)	755
NcoI	CCATGG	2 cut(s)	1258, 2044
NdeII	GATC	9 cut(s)	207, 321, 370, 1036, 1054, 1059, 1077, 1804, 1981
NlaIV	GGNNCC	4 cut(s)	1079, 1724, 2051, 2240
NmeAIII	GCCGAG	1 cut(s)	781
NmuCI	GTSAC	7 cut(s)	177, 218, 521, 809, 1402, 2103, 2140
NruI	TCGCGA	2 cut(s)	141, 1213
NspI	RCATGY	2 cut(s)	595, 2104
NspV	TTCGAA	1 cut(s)	353
PaeR7I	CTCGAG	1 cut(s)	2082
PagI	TCATGA	1 cut(s)	559
PciI	ACATGT	1 cut(s)	2100
PctI	GAATGC	1 cut(s)	149
PdmI	GAANNNNTTC	1 cut(s)	359
PfeI	GAWTC	9 cut(s)	127, 529, 785, 1129, 1379, 1574, 1692, 1909, 2120
PflFI	GACNNNGTC	2 cut(s)	62, 299
PkrI	GCNGC	6 cut(s)	21, 706, 709, 1656, 2214, 2254
PleI	GAGTC	2 cut(s)	159, 184
PmaCI	CACGTG	1 cut(s)	1473
PmeI	GTTTAAAC	1 cut(s)	2335
PmlI	CACGTG	1 cut(s)	1473
PpsI	GAGTC	2 cut(s)	159, 184
Ppu21I	YACGTR	1 cut(s)	1473
PscI	ACATGT	1 cut(s)	2100
PsiI	TTATAA	1 cut(s)	2183
Psp6I	CCWGG	4 cut(s)	1343, 1509, 1614, 1644
PspCI	CACGTG	1 cut(s)	1473
PspGI	CCWGG	4 cut(s)	1343, 1509, 1614, 1644
PspN4I	GGNNCC	4 cut(s)	1079, 1724, 2051, 2240
PspPI	GGNCC	1 cut(s)	2239
PspXI	VCTCGAGB	1 cut(s)	2082
PstI	CTGCAG	1 cut(s)	188
PstNI	CAGNNNCTG	3 cut(s)	216, 2063, 2144
PsuI	RGATCY	3 cut(s)	321, 1036, 1077
PsyI	GACNNNGTC	2 cut(s)	62, 299
PvuII	CAGCTG	1 cut(s)	22
RruI	TCGCGA	2 cut(s)	141, 1213
RsaI	GTAC	6 cut(s)	407, 851, 1192, 1349, 2306, 2353
RsaNI	GTAC	6 cut(s)	406, 850, 1191, 1348, 2305, 2352
RseI	CAYNNNNRTG	5 cut(s)	14, 159, 756, 795, 2110
SaqAI	TTAA	5 cut(s)	542, 795, 1109, 1707, 2334
SatI	GCNGC	6 cut(s)	20, 705, 708, 1655, 2213, 2253
Sau3AI	GATC	9 cut(s)	207, 321, 370, 1036, 1054, 1059, 1077, 1804, 1981
Sau96I	GGNCC	1 cut(s)	2239
SchI	GAGTC	2 cut(s)	160, 185
ScrFI	CCNGG	5 cut(s)	755, 1345, 1511, 1616, 1646
SduI	GDGCHC	3 cut(s)	1690, 1763, 2052
SexAI	ACCWGGT	1 cut(s)	1343
SfaNI	GCATC	4 cut(s)	768, 861, 1183, 1379
SfcI	CTRYAG	2 cut(s)	184, 1840
Sfr274I	CTCGAG	1 cut(s)	2082
SfuI	TTCGAA	1 cut(s)	353
SinI	GGWCC	1 cut(s)	2239
SlaI	CTCGAG	1 cut(s)	2082
SmiMI	CAYNNNNRTG	5 cut(s)	14, 159, 756, 795, 2110
SmlI	CTYRAG	3 cut(s)	290, 2082, 2174
SmoI	CTYRAG	3 cut(s)	290, 2082, 2174
SspMI	CTAG	5 cut(s)	423, 806, 1332, 1781, 2339
StyD4I	CCNGG	5 cut(s)	753, 1343, 1509, 1614, 1644
StyI	CCWWGG	5 cut(s)	102, 453, 1258, 1997, 2044
TaaI	ACNGT	7 cut(s)	436, 732, 828, 1451, 2140, 2322, 2331
TaiI	ACGT	2 cut(s)	984, 1475
TaqI	TCGA	6 cut(s)	66, 353, 477, 869, 1071, 2083
TaqII	GACCGA	1 cut(s)	2392
TatI	WGTACW	4 cut(s)	405, 1190, 2304, 2351
TauI	GCSGC	4 cut(s)	710, 1657, 2215, 2255
TfiI	GAWTC	9 cut(s)	127, 529, 785, 1129, 1379, 1574, 1692, 1909, 2120
Tru1I	TTAA	5 cut(s)	542, 795, 1109, 1707, 2334
Tru9I	TTAA	5 cut(s)	542, 795, 1109, 1707, 2334
TseFI	GTSAC	7 cut(s)	177, 218, 521, 809, 1402, 2103, 2140
TseI	GCWGC	2 cut(s)	19, 704
Tsp45I	GTSAC	7 cut(s)	177, 218, 521, 809, 1402, 2103, 2140
TspDTI	ATGAA	9 cut(s)	28, 548, 576, 855, 1110, 1238, 1679, 1716, 2006
TspGWI	ACGGA	5 cut(s)	1739, 2050, 2231, 2272, 2444
Tth111I	GACNNNGTC	2 cut(s)	62, 299
VneI	GTGCAC	1 cut(s)	1759
VpaK11BI	GGWCC	1 cut(s)	2239
XapI	RAATTY	2 cut(s)	2024, 2246
XceI	RCATGY	2 cut(s)	595, 2104
XcmI	CCANNNNNNNNNTGG	2 cut(s)	254, 1224
XhoI	CTCGAG	1 cut(s)	2082
XmiI	GTMKAC	1 cut(s)	1788
XmnI	GAANNNNTTC	1 cut(s)	359
XspI	CTAG	5 cut(s)	423, 806, 1332, 1781, 2339

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.