Plant organelle RNA recognition domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G62990 |
| fragaria_vesca | FvH4_4g12420 |
| malus_domestica | MD04G1026700.v1.1 MD04G1027400.v1.1 |
| prunus_persica | Prupe.1G176800_v2.0.a1 |
| pyrus_communis | pycom04g02270 |
| rosa_chinensis | RchiOBHm_Chr4g0410651 |
| rosa_laevigata | RLG00000008409 |
| rosa_multiflora | Rmu_co8404567.1_g000001 Rmu_sc0006144.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00355430 |
| rosa_rugosa | Rorug04G0111800 |
| rosa_samantha | Rh4AG162100 Rh4BG161100 Rh4CG175100 Rh4DG157900 |
| rosa_wichuraiana | Rw4G013520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1607 |
| AccB1I | GGYRCC | 1 cut(s) | 963 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 515, 628 |
| AccI | GTMKAC | 2 cut(s) | 21, 678 |
| AciI | CCGC | 5 cut(s) | 40, 66, 200, 644, 1617 |
| AclWI | GGATC | 4 cut(s) | 219, 262, 1260, 1963 |
| AcoI | YGGCCR | 1 cut(s) | 592 |
| AcsI | RAATTY | 3 cut(s) | 566, 768, 1906 |
| AcuI | CTGAAG | 4 cut(s) | 68, 176, 188, 749 |
| AcvI | CACGTG | 1 cut(s) | 665 |
| AfeI | AGCGCT | 1 cut(s) | 384 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 515, 628, 802, 1021, 1695 |
| AjnI | CCWGG | 3 cut(s) | 614, 1014, 1230 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1052, 1084 |
| AluBI | AGCT | 9 cut(s) | 57, 82, 607, 842, 987, 1139, 1439, 1825, 1930 |
| AluI | AGCT | 9 cut(s) | 57, 82, 607, 842, 987, 1139, 1439, 1825, 1930 |
| Alw21I | GWGCWC | 2 cut(s) | 601, 2025 |
| Alw26I | GTCTC | 4 cut(s) | 543, 548, 1283, 1482 |
| Alw44I | GTGCAC | 1 cut(s) | 597 |
| AlwI | GGATC | 4 cut(s) | 219, 262, 1260, 1963 |
| Aor51HI | AGCGCT | 1 cut(s) | 384 |
| AoxI | GGCC | 2 cut(s) | 592, 683 |
| ApaLI | GTGCAC | 1 cut(s) | 597 |
| ApeKI | GCWGC | 7 cut(s) | 172, 374, 377, 380, 389, 1436, 1719 |
| ApoI | RAATTY | 3 cut(s) | 566, 768, 1906 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 236, 268 |
| AseI | ATTAAT | 1 cut(s) | 893 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2116 |
| AspLEI | GCGC | 1 cut(s) | 385 |
| AspS9I | GGNCC | 2 cut(s) | 506, 619 |
| AsuHPI | GGTGA | 8 cut(s) | 464, 491, 515, 865, 1084, 1187, 1286, 1325 |
| AsuII | TTCGAA | 1 cut(s) | 1798 |
| AvaII | GGWCC | 2 cut(s) | 506, 619 |
| BaeGI | GKGCMC | 2 cut(s) | 601, 785 |
| BanI | GGYRCC | 1 cut(s) | 963 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1809, 1841 |
| BbrPI | CACGTG | 1 cut(s) | 665 |
| BbsI | GAAGAC | 4 cut(s) | 289, 512, 1356, 1824 |
| Bbv12I | GWGCWC | 2 cut(s) | 601, 2025 |
| BbvI | GCAGC | 7 cut(s) | 159, 361, 376, 389, 392, 1448, 1706 |
| BccI | CCATC | 8 cut(s) | 263, 279, 425, 564, 868, 1084, 1217, 1637 |
| BceAI | ACGGC | 2 cut(s) | 579, 607 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1701, 1735 |
| BciT130I | CCWGG | 3 cut(s) | 616, 1016, 1232 |
| BciVI | GTATCC | 2 cut(s) | 622, 1693 |
| BclI | TGATCA | 1 cut(s) | 1735 |
| BcoDI | GTCTC | 4 cut(s) | 543, 548, 1283, 1482 |
| BfaI | CTAG | 5 cut(s) | 113, 479, 866, 1155, 1979 |
| BfmI | CTRYAG | 2 cut(s) | 375, 1326 |
| BfoI | RGCGCY | 1 cut(s) | 386 |
| BfuI | GTATCC | 2 cut(s) | 622, 1693 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1983 |
| BglII | AGATCT | 1 cut(s) | 511 |
| BisI | GCNGC | 8 cut(s) | 66, 173, 375, 378, 381, 390, 1437, 1720 |
| BlsI | GCNGC | 8 cut(s) | 67, 174, 376, 379, 382, 391, 1438, 1721 |
| Bme1390I | CCNGG | 3 cut(s) | 616, 1016, 1232 |
| Bme18I | GGWCC | 2 cut(s) | 506, 619 |
| BmgT120I | GGNCC | 2 cut(s) | 506, 619 |
| BmiI | GGNNCC | 4 cut(s) | 620, 965, 1374, 1681 |
| BmrFI | CCNGG | 3 cut(s) | 616, 1016, 1232 |
| BmrI | ACTGGG | 1 cut(s) | 244 |
| BmsI | GCATC | 7 cut(s) | 16, 179, 1321, 1579, 1628, 1906, 2053 |
| BmuI | ACTGGG | 1 cut(s) | 244 |
| BpiI | GAAGAC | 4 cut(s) | 289, 512, 1356, 1824 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1123, 1155 |
| BpmI | CTGGAG | 3 cut(s) | 428, 633, 1464 |
| Bpu10I | CCTNAGC | 1 cut(s) | 393 |
| Bpu14I | TTCGAA | 1 cut(s) | 1798 |
| BpuEI | CTTGAG | 2 cut(s) | 623, 2112 |
| BsaAI | YACGTR | 1 cut(s) | 665 |
| BsaI | GGTCTC | 2 cut(s) | 543, 1482 |
| BsaJI | CCNNGG | 4 cut(s) | 429, 502, 615, 801 |
| BsaWI | WCCGGW | 1 cut(s) | 2035 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1462, 1492, 1736, 1766 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 515, 628, 802, 1021, 1695 |
| Bse118I | RCCGGY | 1 cut(s) | 474 |
| Bse1I | ACTGG | 2 cut(s) | 250, 1519 |
| Bse3DI | GCAATG | 2 cut(s) | 556, 1626 |
| BseBI | CCWGG | 3 cut(s) | 616, 1016, 1232 |
| BseDI | CCNNGG | 4 cut(s) | 429, 502, 615, 801 |
| BseGI | GGATG | 8 cut(s) | 103, 255, 556, 876, 957, 1270, 2004, 2095 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 515, 628, 802, 1021, 1695 |
| BseMI | GCAATG | 2 cut(s) | 556, 1626 |
| BseMII | CTCAG | 6 cut(s) | 85, 407, 960, 1239, 1950, 2040 |
| BseNI | ACTGG | 2 cut(s) | 250, 1519 |
| BseRI | GAGGAG | 1 cut(s) | 1144 |
| BseSI | GKGCMC | 2 cut(s) | 601, 785 |
| BseX3I | CGGCCG | 1 cut(s) | 592 |
| BseXI | GCAGC | 7 cut(s) | 159, 361, 376, 389, 392, 1448, 1706 |
| Bsh1285I | CGRYCG | 1 cut(s) | 595 |
| BshFI | GGCC | 2 cut(s) | 594, 685 |
| BshNI | GGYRCC | 1 cut(s) | 963 |
| BsiEI | CGRYCG | 1 cut(s) | 595 |
| BsiHKAI | GWGCWC | 2 cut(s) | 601, 2025 |
| BsiSI | CCGG | 2 cut(s) | 475, 2036 |
| BslFI | GGGAC | 2 cut(s) | 632, 2156 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 515, 628, 802, 1021, 1695 |
| BsmAI | GTCTC | 4 cut(s) | 543, 548, 1283, 1482 |
| BsmBI | CGTCTC | 1 cut(s) | 548 |
| BsmFI | GGGAC | 2 cut(s) | 632, 2156 |
| BsnI | GGCC | 2 cut(s) | 594, 685 |
| Bso31I | GGTCTC | 2 cut(s) | 543, 1482 |
| Bsp119I | TTCGAA | 1 cut(s) | 1798 |
| Bsp1286I | GDGCHC | 3 cut(s) | 601, 785, 2025 |
| BspACI | CCGC | 5 cut(s) | 40, 66, 200, 644, 1617 |
| BspANI | GGCC | 2 cut(s) | 594, 685 |
| BspCNI | CTCAG | 6 cut(s) | 84, 406, 961, 1240, 1951, 2039 |
| BspHI | TCATGA | 3 cut(s) | 1546, 1842, 2059 |
| BspLI | GGNNCC | 4 cut(s) | 620, 965, 1374, 1681 |
| BspMAI | CTGCAG | 2 cut(s) | 379, 1330 |
| BspPI | GGATC | 4 cut(s) | 219, 262, 1260, 1963 |
| BspT104I | TTCGAA | 1 cut(s) | 1798 |
| BspT107I | GGYRCC | 1 cut(s) | 963 |
| BspTNI | GGTCTC | 2 cut(s) | 543, 1482 |
| BsrDI | GCAATG | 2 cut(s) | 556, 1626 |
| BsrFI | RCCGGY | 1 cut(s) | 474 |
| BsrI | ACTGG | 2 cut(s) | 250, 1519 |
| BssAI | RCCGGY | 1 cut(s) | 474 |
| BssECI | CCNNGG | 4 cut(s) | 429, 502, 615, 801 |
| BssT1I | CCWWGG | 2 cut(s) | 429, 502 |
| Bst2UI | CCWGG | 3 cut(s) | 616, 1016, 1232 |
| Bst4CI | ACNGT | 4 cut(s) | 19, 147, 1830, 2137 |
| Bst6I | CTCTTC | 2 cut(s) | 725, 1571 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 386 |
| BstBAI | YACGTR | 1 cut(s) | 665 |
| BstBI | TTCGAA | 1 cut(s) | 1798 |
| BstC8I | GCNNGC | 4 cut(s) | 387, 1141, 1594, 2173 |
| BstDEI | CTNAG | 6 cut(s) | 71, 393, 969, 1248, 1959, 2026 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1019 |
| BstF5I | GGATG | 8 cut(s) | 103, 255, 556, 876, 957, 1270, 2004, 2095 |
| BstH2I | RGCGCY | 1 cut(s) | 386 |
| BstHHI | GCGC | 1 cut(s) | 385 |
| BstMAI | GTCTC | 4 cut(s) | 543, 548, 1283, 1482 |
| BstMCI | CGRYCG | 1 cut(s) | 595 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 380, 386, 389, 1428, 1983 |
| BstNI | CCWGG | 3 cut(s) | 616, 1016, 1232 |
| BstNSI | RCATGY | 1 cut(s) | 125 |
| BstSCI | CCNGG | 3 cut(s) | 614, 1014, 1230 |
| BstSFI | CTRYAG | 2 cut(s) | 375, 1326 |
| BstSLI | GKGCMC | 2 cut(s) | 601, 785 |
| BstV1I | GCAGC | 7 cut(s) | 159, 361, 376, 389, 392, 1448, 1706 |
| BstV2I | GAAGAC | 4 cut(s) | 289, 512, 1356, 1824 |
| BstX2I | RGATCY | 3 cut(s) | 511, 1252, 1955 |
| BstYI | RGATCY | 3 cut(s) | 511, 1252, 1955 |
| BstZI | CGGCCG | 1 cut(s) | 592 |
| BsuI | GTATCC | 2 cut(s) | 622, 1693 |
| BsuRI | GGCC | 2 cut(s) | 594, 685 |
| BtsCI | GGATG | 8 cut(s) | 103, 255, 556, 876, 957, 1270, 2004, 2095 |
| BtsI | GCAGTG | 3 cut(s) | 167, 1465, 1885 |
| BtsIMutI | CAGTG | 4 cut(s) | 92, 167, 1465, 1885 |
| Cac8I | GCNNGC | 4 cut(s) | 387, 1141, 1594, 2173 |
| CciI | TCATGA | 3 cut(s) | 1546, 1842, 2059 |
| CfoI | GCGC | 1 cut(s) | 385 |
| Cfr10I | RCCGGY | 1 cut(s) | 474 |
| Cfr13I | GGNCC | 2 cut(s) | 506, 619 |
| CseI | GACGC | 1 cut(s) | 321 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1488, 1523 |
| CviAII | CATG | 8 cut(s) | 122, 319, 1412, 1547, 1843, 1857, 2060, 2183 |
| DdeI | CTNAG | 6 cut(s) | 71, 393, 969, 1248, 1959, 2026 |
| EaeI | YGGCCR | 1 cut(s) | 592 |
| EagI | CGGCCG | 1 cut(s) | 592 |
| Eam1104I | CTCTTC | 2 cut(s) | 725, 1571 |
| EarI | CTCTTC | 2 cut(s) | 725, 1571 |
| EclXI | CGGCCG | 1 cut(s) | 592 |
| Eco130I | CCWWGG | 2 cut(s) | 429, 502 |
| Eco147I | AGGCCT | 1 cut(s) | 685 |
| Eco31I | GGTCTC | 2 cut(s) | 543, 1482 |
| Eco47I | GGWCC | 2 cut(s) | 506, 619 |
| Eco47III | AGCGCT | 1 cut(s) | 384 |
| Eco52I | CGGCCG | 1 cut(s) | 592 |
| Eco57I | CTGAAG | 4 cut(s) | 68, 176, 188, 749 |
| Eco72I | CACGTG | 1 cut(s) | 665 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1019 |
| EcoRII | CCWGG | 3 cut(s) | 614, 1014, 1230 |
| EcoT14I | CCWWGG | 2 cut(s) | 429, 502 |
| ErhI | CCWWGG | 2 cut(s) | 429, 502 |
| Esp3I | CGTCTC | 1 cut(s) | 548 |
| FaeI | CATG | 8 cut(s) | 125, 322, 1415, 1550, 1846, 1860, 2063, 2186 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1128, 1160, 1929, 1961 |
| FaqI | GGGAC | 2 cut(s) | 632, 2156 |
| FatI | CATG | 8 cut(s) | 121, 318, 1411, 1546, 1842, 1856, 2059, 2182 |
| FauI | CCCGC | 1 cut(s) | 47 |
| FbaI | TGATCA | 1 cut(s) | 1735 |
| FblI | GTMKAC | 2 cut(s) | 21, 678 |
| Fnu4HI | GCNGC | 8 cut(s) | 66, 173, 375, 378, 381, 390, 1437, 1720 |
| FokI | GGATG | 8 cut(s) | 110, 242, 543, 883, 964, 1277, 1991, 2102 |
| Fsp4HI | GCNGC | 8 cut(s) | 66, 173, 375, 378, 381, 390, 1437, 1720 |
| FspBI | CTAG | 5 cut(s) | 113, 479, 866, 1155, 1979 |
| GlaI | GCGC | 1 cut(s) | 384 |
| GluI | GCNGC | 8 cut(s) | 66, 173, 375, 378, 381, 390, 1437, 1720 |
| GsuI | CTGGAG | 3 cut(s) | 428, 633, 1464 |
| HaeII | RGCGCY | 1 cut(s) | 386 |
| HaeIII | GGCC | 2 cut(s) | 594, 685 |
| HapII | CCGG | 2 cut(s) | 475, 2036 |
| HgaI | GACGC | 1 cut(s) | 321 |
| HhaI | GCGC | 1 cut(s) | 385 |
| Hin1II | CATG | 8 cut(s) | 125, 322, 1415, 1550, 1846, 1860, 2063, 2186 |
| Hin6I | GCGC | 1 cut(s) | 383 |
| HinP1I | GCGC | 1 cut(s) | 383 |
| HincII | GTYRAC | 1 cut(s) | 22 |
| HindII | GTYRAC | 1 cut(s) | 22 |
| HindIII | AAGCTT | 2 cut(s) | 80, 1928 |
| HpaII | CCGG | 2 cut(s) | 475, 2036 |
| HphI | GGTGA | 8 cut(s) | 464, 491, 515, 865, 1084, 1187, 1286, 1325 |
| Hpy166II | GTNNAC | 7 cut(s) | 22, 499, 599, 679, 1043, 1385, 2195 |
| Hpy8I | GTNNAC | 7 cut(s) | 22, 499, 599, 679, 1043, 1385, 2195 |
| Hpy99I | CGWCG | 3 cut(s) | 23, 26, 51 |
| HpyAV | CCTTC | 1 cut(s) | 117 |
| HpyCH4III | ACNGT | 4 cut(s) | 19, 147, 1830, 2137 |
| HpyCH4IV | ACGT | 2 cut(s) | 49, 664 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 380, 386, 389, 1428, 1983 |
| HpyF3I | CTNAG | 6 cut(s) | 71, 393, 969, 1248, 1959, 2026 |
| HpySE526I | ACGT | 2 cut(s) | 49, 664 |
| Hsp92II | CATG | 8 cut(s) | 125, 322, 1415, 1550, 1846, 1860, 2063, 2186 |
| HspAI | GCGC | 1 cut(s) | 383 |
| Ksp22I | TGATCA | 1 cut(s) | 1735 |
| LmnI | GCTCC | 1 cut(s) | 1372 |
| Lsp1109I | GCAGC | 7 cut(s) | 159, 361, 376, 389, 392, 1448, 1706 |
| LweI | GCATC | 7 cut(s) | 16, 179, 1321, 1579, 1628, 1906, 2053 |
| MaeI | CTAG | 5 cut(s) | 113, 479, 866, 1155, 1979 |
| MaeII | ACGT | 2 cut(s) | 49, 664 |
| MaeIII | GTNAC | 3 cut(s) | 159, 275, 1774 |
| MfeI | CAATTG | 2 cut(s) | 822, 2013 |
| MflI | RGATCY | 3 cut(s) | 511, 1252, 1955 |
| MhlI | GDGCHC | 3 cut(s) | 601, 785, 2025 |
| MlyI | GAGTC | 5 cut(s) | 419, 827, 1253, 2010, 2119 |
| MmeI | TCCRAC | 4 cut(s) | 72, 332, 1383, 2032 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2116 |
| MseI | TTAA | 5 cut(s) | 213, 893, 1146, 1571, 1731 |
| MspI | CCGG | 2 cut(s) | 475, 2036 |
| MspR9I | CCNGG | 3 cut(s) | 616, 1016, 1232 |
| MunI | CAATTG | 2 cut(s) | 822, 2013 |
| MvaI | CCWGG | 3 cut(s) | 616, 1016, 1232 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 380, 386, 389, 1428, 1983 |
| NlaIII | CATG | 8 cut(s) | 125, 322, 1415, 1550, 1846, 1860, 2063, 2186 |
| NlaIV | GGNNCC | 4 cut(s) | 620, 965, 1374, 1681 |
| NspI | RCATGY | 1 cut(s) | 125 |
| NspV | TTCGAA | 1 cut(s) | 1798 |
| PagI | TCATGA | 3 cut(s) | 1546, 1842, 2059 |
| PceI | AGGCCT | 1 cut(s) | 685 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 27 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2116 |
| PfeI | GAWTC | 7 cut(s) | 208, 398, 706, 724, 1004, 1424, 1550 |
| PflFI | GACNNNGTC | 1 cut(s) | 1474 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 515, 628 |
| PfoI | TCCNGGA | 1 cut(s) | 1230 |
| PkrI | GCNGC | 8 cut(s) | 67, 174, 376, 379, 382, 391, 1438, 1721 |
| PleI | GAGTC | 5 cut(s) | 419, 826, 1252, 2009, 2119 |
| PmaCI | CACGTG | 1 cut(s) | 665 |
| PmlI | CACGTG | 1 cut(s) | 665 |
| PpsI | GAGTC | 5 cut(s) | 419, 826, 1252, 2009, 2119 |
| Ppu21I | YACGTR | 1 cut(s) | 665 |
| PshBI | ATTAAT | 1 cut(s) | 893 |
| PsiI | TTATAA | 1 cut(s) | 1607 |
| Psp6I | CCWGG | 3 cut(s) | 614, 1014, 1230 |
| PspCI | CACGTG | 1 cut(s) | 665 |
| PspGI | CCWGG | 3 cut(s) | 614, 1014, 1230 |
| PspN4I | GGNNCC | 4 cut(s) | 620, 965, 1374, 1681 |
| PspPI | GGNCC | 2 cut(s) | 506, 619 |
| PstI | CTGCAG | 2 cut(s) | 379, 1330 |
| PsuI | RGATCY | 3 cut(s) | 511, 1252, 1955 |
| PsyI | GACNNNGTC | 1 cut(s) | 1474 |
| SalI | GTCGAC | 1 cut(s) | 20 |
| SaqAI | TTAA | 5 cut(s) | 213, 893, 1146, 1571, 1731 |
| SatI | GCNGC | 8 cut(s) | 66, 173, 375, 378, 381, 390, 1437, 1720 |
| Sau96I | GGNCC | 2 cut(s) | 506, 619 |
| SchI | GAGTC | 5 cut(s) | 419, 827, 1253, 2010, 2119 |
| ScrFI | CCNGG | 3 cut(s) | 616, 1016, 1232 |
| SduI | GDGCHC | 3 cut(s) | 601, 785, 2025 |
| SfaNI | GCATC | 7 cut(s) | 16, 179, 1321, 1579, 1628, 1906, 2053 |
| SfcI | CTRYAG | 2 cut(s) | 375, 1326 |
| SfuI | TTCGAA | 1 cut(s) | 1798 |
| SgrDI | CGTCGACG | 1 cut(s) | 20 |
| SinI | GGWCC | 2 cut(s) | 506, 619 |
| SmlI | CTYRAG | 2 cut(s) | 602, 2127 |
| SmoI | CTYRAG | 2 cut(s) | 602, 2127 |
| SseBI | AGGCCT | 1 cut(s) | 685 |
| SsiI | CCGC | 5 cut(s) | 40, 66, 200, 644, 1617 |
| SspMI | CTAG | 5 cut(s) | 113, 479, 866, 1155, 1979 |
| StuI | AGGCCT | 1 cut(s) | 685 |
| StyD4I | CCNGG | 3 cut(s) | 614, 1014, 1230 |
| StyI | CCWWGG | 2 cut(s) | 429, 502 |
| TaaI | ACNGT | 4 cut(s) | 19, 147, 1830, 2137 |
| TaiI | ACGT | 2 cut(s) | 52, 667 |
| TaqI | TCGA | 5 cut(s) | 5, 21, 46, 223, 1798 |
| TaqII | GACCGA | 1 cut(s) | 525 |
| TauI | GCSGC | 1 cut(s) | 68 |
| TfiI | GAWTC | 7 cut(s) | 208, 398, 706, 724, 1004, 1424, 1550 |
| Tru1I | TTAA | 5 cut(s) | 213, 893, 1146, 1571, 1731 |
| Tru9I | TTAA | 5 cut(s) | 213, 893, 1146, 1571, 1731 |
| TscAI | CASTG | 4 cut(s) | 92, 174, 1465, 1885 |
| TseI | GCWGC | 7 cut(s) | 172, 374, 377, 380, 389, 1436, 1719 |
| TspDTI | ATGAA | 6 cut(s) | 1206, 1400, 1563, 1845, 1859, 1950 |
| TspGWI | ACGGA | 1 cut(s) | 350 |
| TspRI | CASTG | 4 cut(s) | 92, 174, 1465, 1885 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1474 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 515, 628 |
| VneI | GTGCAC | 1 cut(s) | 597 |
| VpaK11BI | GGWCC | 2 cut(s) | 506, 619 |
| VspI | ATTAAT | 1 cut(s) | 893 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1019 |
| XapI | RAATTY | 3 cut(s) | 566, 768, 1906 |
| XceI | RCATGY | 1 cut(s) | 125 |
| XmiI | GTMKAC | 2 cut(s) | 21, 678 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2116 |
| XspI | CTAG | 5 cut(s) | 113, 479, 866, 1155, 1979 |