RLG00000012255

phospholipase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
16793111 .. 16794459
1349 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012255

Sequence Viewer

Length: 1155 bp
ATGACTGACTTTTCCAAAAACTGGGAAAAACTGTCTGGTGACAATCTCTGGAGTGCTCTTAAAGATCCTCTCCACGTCGATCTCCGCCGCTATATCATTCATTACGGTGAAAGGGCTGGAGCTATTGACGATGCCTTCATTGATGGCAAGCTCGTTTCCCCGATAAATCCCCAGTCCATCGGATATCCTCGATATGCAAGGAAAGATTTATTCAATAAAGTGGGATTGGTGAAAGGCAATTATCGACCCACGTACATAGTGGAGAAATATGTGTATGGAGCACCAAAACTGCGATCTCGCCCATCCTACCTGTTGGCTTACGTTGCGGTGTCAGACAATGAAGGAACTAAAGCCTTGGGGAGGAGGGACATTCTGATTGCCTGGAGAGGAACCAAGTTGGAGGCTGAAGTTGCTGTCGACAAAAAAACCGAACTACGCCCGGCTCCTAAAATTTTTGGAAACCAGTATGCCGGCGCTATGGTGCACGGTGGTTGGTATGATTATTACACTAATACTGACGTTAGGACCCCCAAGAACCAACGTACTAGTTGCCAAGATCAGGTTGGAGAGGCAGTTAGAAAACTGATAGATCAATACGGTAACGAGGGTCAAGAAGTCAGCATTACTATAACTGGCCGCGGCACTGGTGCTGCATTTGCAATTTTAAATGGGATGGATATTGTATGCAACAAACTCAATTGTCCTACAAAACAACCCAAGAGCCCATGTCTGGTCACGGCGATTGTCTTTGGCTGTCCCTTTGTTGGAAACGAAGCCTTTAAGAATGCGGAGAACGATGAGACCATGTTTCAGATCTTGCGGGTCACAAATGAACCAGATCCAGTGACTAATTCGGAGCCTTCTCCGGAATATGAACATATTGGAGTAGAGCTGAAAATTAACACAGTCAATTCGCCCTACTTGAAGAATCCAATAGATACCGTACATGAGTTGGAGGTTTACTTGCATGGGGTCGCAGCACACCCAGGGACAACTGTGGCGTTGGAAGATATCCGCAGTACAGTGATGGTGAACAAAACATTGGACGGTCTTAAGGATGAAACTATAGTCCCCCCCATCTGGATTTTAAACAAGTTCATGGTTCAAAATGAGAGAGGCGCCTGGGAGCTGAAGGATGTTCCCGTTGACGATTAG

Protein Analysis

385

Amino Acids

42.94

Weight (kDa)

6.05

Isoelectric Point (pI)

28.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 126 - 285 3.6e-22 Lipase (class 3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0016264)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1118
AccB7I CCANNNNNTGG 1 cut(s) 21
AccI GTMKAC 1 cut(s) 417
AccII CGCG 1 cut(s) 639
AccIII TCCGGA 1 cut(s) 865
AciI CCGC 8 cut(s) 85, 88, 326, 637, 639, 788, 820, 1015
AclWI GGATC 2 cut(s) 59, 833
AcoI YGGCCR 1 cut(s) 634
AcsI RAATTY 1 cut(s) 450
AcuI CTGAAG 2 cut(s) 426, 1151
AcyI GRCGYC 1 cut(s) 1119
AfaI GTAC 4 cut(s) 254, 544, 945, 1021
AfiI CCNNNNNNNGG 6 cut(s) 21, 360, 559, 730, 764, 1080
AflII CTTAAG 1 cut(s) 1052
AgsI TTSAA 3 cut(s) 214, 925, 1106
AhlI ACTAGT 1 cut(s) 545
AjiI CACGTC 1 cut(s) 76
AjnI CCWGG 3 cut(s) 380, 985, 1121
AjuI GAANNNNNNNTTGG 2 cut(s) 1025, 1057
AluBI AGCT 4 cut(s) 122, 151, 892, 1129
AluI AGCT 4 cut(s) 122, 151, 892, 1129
Alw21I GWGCWC 3 cut(s) 58, 283, 486
Alw26I GTCTC 1 cut(s) 794
Alw44I GTGCAC 1 cut(s) 482
AlwI GGATC 2 cut(s) 59, 833
Aor13HI TCCGGA 1 cut(s) 865
AoxI GGCC 1 cut(s) 634
ApaLI GTGCAC 1 cut(s) 482
ApeKI GCWGC 2 cut(s) 650, 977
ApoI RAATTY 1 cut(s) 450
AspLEI GCGC 2 cut(s) 476, 1121
AspS9I GGNCC 1 cut(s) 525
AsuC2I CCSGG 1 cut(s) 440
AsuHPI GGTGA 4 cut(s) 50, 119, 241, 1042
AvaII GGWCC 1 cut(s) 525
BaeGI GKGCMC 1 cut(s) 486
BanI GGYRCC 1 cut(s) 1118
BanII GRGCYC 1 cut(s) 725
Bbv12I GWGCWC 3 cut(s) 58, 283, 486
BbvI GCAGC 2 cut(s) 637, 989
BccI CCATC 6 cut(s) 137, 185, 310, 667, 1021, 1085
BceAI ACGGC 1 cut(s) 753
BciT130I CCWGG 3 cut(s) 382, 987, 1123
BcnI CCSGG 1 cut(s) 440
BcoDI GTCTC 1 cut(s) 794
BcuI ACTAGT 1 cut(s) 545
BfaI CTAG 1 cut(s) 546
BfmI CTRYAG 1 cut(s) 1065
BfoI RGCGCY 2 cut(s) 477, 1122
BfrI CTTAAG 1 cut(s) 1052
BglII AGATCT 1 cut(s) 813
BisI GCNGC 5 cut(s) 88, 637, 640, 651, 978
BlsI GCNGC 5 cut(s) 89, 638, 641, 652, 979
Bme1390I CCNGG 4 cut(s) 382, 440, 987, 1123
Bme18I GGWCC 1 cut(s) 525
BmgBI CACGTC 1 cut(s) 76
BmgT120I GGNCC 1 cut(s) 525
BmiI GGNNCC 5 cut(s) 391, 444, 527, 858, 1120
BmrFI CCNGG 4 cut(s) 382, 440, 987, 1123
BmrI ACTGGG 2 cut(s) 31, 166
BmsI GCATC 1 cut(s) 121
BmuI ACTGGG 2 cut(s) 31, 166
BpmI CTGGAG 3 cut(s) 70, 138, 403
BpuMI CCSGG 1 cut(s) 440
BsaAI YACGTR 1 cut(s) 252
BsaHI GRCGYC 1 cut(s) 1119
BsaI GGTCTC 1 cut(s) 794
BsaJI CCNNGG 5 cut(s) 354, 637, 985, 986, 1122
BsaWI WCCGGW 1 cut(s) 865
BsaXI ACNNNNNCTCC 2 cut(s) 558, 588
Bsc4I CCNNNNNNNGG 6 cut(s) 21, 360, 559, 730, 764, 1080
Bse118I RCCGGY 1 cut(s) 470
Bse1I ACTGG 6 cut(s) 26, 172, 463, 637, 649, 842
BseAI TCCGGA 1 cut(s) 865
BseBI CCWGG 3 cut(s) 382, 987, 1123
BseDI CCNNGG 5 cut(s) 354, 637, 985, 986, 1122
BseGI GGATG 4 cut(s) 302, 678, 1063, 1141
BseLI CCNNNNNNNGG 6 cut(s) 21, 360, 559, 730, 764, 1080
BseNI ACTGG 6 cut(s) 26, 172, 463, 637, 649, 842
BseRI GAGGAG 1 cut(s) 376
BseSI GKGCMC 1 cut(s) 486
BseXI GCAGC 2 cut(s) 637, 989
Bsh1236I CGCG 1 cut(s) 639
BshFI GGCC 1 cut(s) 636
BshNI GGYRCC 1 cut(s) 1118
BsiHKAI GWGCWC 3 cut(s) 58, 283, 486
BsiSI CCGG 3 cut(s) 440, 471, 866
BslFI GGGAC 4 cut(s) 380, 741, 1003, 1055
BslI CCNNNNNNNGG 6 cut(s) 21, 360, 559, 730, 764, 1080
BsmAI GTCTC 1 cut(s) 794
BsmFI GGGAC 4 cut(s) 380, 741, 1003, 1055
BsmI GAATGC 1 cut(s) 790
BsnI GGCC 1 cut(s) 636
Bso31I GGTCTC 1 cut(s) 794
Bsp1286I GDGCHC 4 cut(s) 58, 283, 486, 725
Bsp13I TCCGGA 1 cut(s) 865
Bsp143I GATC 7 cut(s) 64, 79, 293, 556, 589, 813, 838
BspACI CCGC 8 cut(s) 85, 88, 326, 637, 639, 788, 820, 1015
BspANI GGCC 1 cut(s) 636
BspEI TCCGGA 1 cut(s) 865
BspFNI CGCG 1 cut(s) 639
BspLI GGNNCC 5 cut(s) 391, 444, 527, 858, 1120
BspPI GGATC 2 cut(s) 59, 833
BspT107I GGYRCC 1 cut(s) 1118
BspTI CTTAAG 1 cut(s) 1052
BspTNI GGTCTC 1 cut(s) 794
BsrFI RCCGGY 1 cut(s) 470
BsrI ACTGG 6 cut(s) 26, 172, 463, 637, 649, 842
BssAI RCCGGY 1 cut(s) 470
BssECI CCNNGG 5 cut(s) 354, 637, 985, 986, 1122
BssMI GATC 7 cut(s) 64, 79, 293, 556, 589, 813, 838
BssNI GRCGYC 1 cut(s) 1119
BssT1I CCWWGG 1 cut(s) 354
Bst2UI CCWGG 3 cut(s) 382, 987, 1123
Bst4CI ACNGT 9 cut(s) 33, 107, 488, 599, 907, 943, 997, 1024, 1049
BstACI GRCGYC 1 cut(s) 1119
BstAFI CTTAAG 1 cut(s) 1052
BstBAI YACGTR 1 cut(s) 252
BstC8I GCNNGC 2 cut(s) 149, 472
BstDSI CCRYGG 1 cut(s) 637
BstENI CCTNNNNNAGG 1 cut(s) 358
BstF5I GGATG 4 cut(s) 302, 678, 1063, 1141
BstFNI CGCG 1 cut(s) 639
BstH2I RGCGCY 2 cut(s) 477, 1122
BstHHI GCGC 2 cut(s) 476, 1121
BstKTI GATC 7 cut(s) 67, 82, 296, 559, 592, 816, 841
BstMAI GTCTC 1 cut(s) 794
BstMBI GATC 7 cut(s) 64, 79, 293, 556, 589, 813, 838
BstMWI GCNNNNNNNGC 3 cut(s) 323, 410, 656
BstNI CCWGG 3 cut(s) 382, 987, 1123
BstSCI CCNGG 4 cut(s) 380, 438, 985, 1121
BstSFI CTRYAG 1 cut(s) 1065
BstSLI GKGCMC 1 cut(s) 486
BstUI CGCG 1 cut(s) 639
BstV1I GCAGC 2 cut(s) 637, 989
BstX2I RGATCY 3 cut(s) 64, 813, 838
BstYI RGATCY 3 cut(s) 64, 813, 838
BsuRI GGCC 1 cut(s) 636
BtgI CCRYGG 1 cut(s) 637
BtrI CACGTC 1 cut(s) 76
BtsCI GGATG 4 cut(s) 302, 678, 1063, 1141
BtsIMutI CAGTG 3 cut(s) 642, 849, 1029
Cac8I GCNNGC 2 cut(s) 149, 472
CfoI GCGC 2 cut(s) 476, 1121
Cfr10I RCCGGY 1 cut(s) 470
Cfr13I GGNCC 1 cut(s) 525
Cfr42I CCGCGG 1 cut(s) 640
Csp6I GTAC 4 cut(s) 253, 543, 944, 1020
CviAII CATG 5 cut(s) 726, 805, 947, 968, 1099
CviQI GTAC 4 cut(s) 253, 543, 944, 1020
DinI GGCGCC 1 cut(s) 1120
DpnI GATC 7 cut(s) 66, 81, 295, 558, 591, 815, 840
DpnII GATC 7 cut(s) 64, 79, 293, 556, 589, 813, 838
DraI TTTAAA 2 cut(s) 666, 1089
EaeI YGGCCR 1 cut(s) 634
EciI GGCGGA 1 cut(s) 74
Eco130I CCWWGG 1 cut(s) 354
Eco24I GRGCYC 1 cut(s) 725
Eco31I GGTCTC 1 cut(s) 794
Eco32I GATATC 2 cut(s) 185, 1012
Eco47I GGWCC 1 cut(s) 525
Eco57I CTGAAG 2 cut(s) 426, 1151
EcoNI CCTNNNNNAGG 1 cut(s) 358
EcoO109I RGGNCCY 1 cut(s) 525
EcoRII CCWGG 3 cut(s) 380, 985, 1121
EcoRV GATATC 2 cut(s) 185, 1012
EcoT14I CCWWGG 1 cut(s) 354
EcoT38I GRGCYC 1 cut(s) 725
EgeI GGCGCC 1 cut(s) 1120
EheI GGCGCC 1 cut(s) 1120
ErhI CCWWGG 1 cut(s) 354
FaeI CATG 5 cut(s) 729, 808, 950, 971, 1102
FaqI GGGAC 4 cut(s) 380, 741, 1003, 1055
FatI CATG 5 cut(s) 725, 804, 946, 967, 1098
FauI CCCGC 1 cut(s) 813
FblI GTMKAC 1 cut(s) 417
Fnu4HI GCNGC 5 cut(s) 88, 637, 640, 651, 978
FokI GGATG 4 cut(s) 289, 685, 1070, 1148
FriOI GRGCYC 1 cut(s) 725
Fsp4HI GCNGC 5 cut(s) 88, 637, 640, 651, 978
FspBI CTAG 1 cut(s) 546
GlaI GCGC 2 cut(s) 475, 1120
GluI GCNGC 5 cut(s) 88, 637, 640, 651, 978
GsuI CTGGAG 3 cut(s) 70, 138, 403
HaeII RGCGCY 2 cut(s) 477, 1122
HaeIII GGCC 1 cut(s) 636
HapII CCGG 3 cut(s) 440, 471, 866
HhaI GCGC 2 cut(s) 476, 1121
Hin1I GRCGYC 1 cut(s) 1119
Hin1II CATG 5 cut(s) 729, 808, 950, 971, 1102
Hin6I GCGC 2 cut(s) 474, 1119
HinP1I GCGC 2 cut(s) 474, 1119
HincII GTYRAC 2 cut(s) 418, 1147
HindII GTYRAC 2 cut(s) 418, 1147
HinfI GANTC 1 cut(s) 928
HpaII CCGG 3 cut(s) 440, 471, 866
HphI GGTGA 4 cut(s) 50, 119, 241, 1042
Hpy166II GTNNAC 5 cut(s) 418, 484, 961, 1033, 1147
Hpy188I TCNGA 5 cut(s) 182, 334, 375, 813, 856
Hpy188III TCNNGA 4 cut(s) 49, 611, 866, 1081
Hpy8I GTNNAC 5 cut(s) 418, 484, 961, 1033, 1147
Hpy99I CGWCG 1 cut(s) 80
HpyAV CCTTC 4 cut(s) 145, 335, 870, 1126
HpyCH4III ACNGT 9 cut(s) 33, 107, 488, 599, 907, 943, 997, 1024, 1049
HpyCH4IV ACGT 5 cut(s) 75, 251, 321, 519, 541
HpyCH4V TGCA 6 cut(s) 197, 484, 653, 659, 687, 967
HpyF10VI GCNNNNNNNGC 3 cut(s) 323, 410, 656
HpySE526I ACGT 5 cut(s) 75, 251, 321, 519, 541
Hsp92I GRCGYC 1 cut(s) 1119
Hsp92II CATG 5 cut(s) 729, 808, 950, 971, 1102
HspAI GCGC 2 cut(s) 474, 1119
KasI GGCGCC 1 cut(s) 1118
Kpn2I TCCGGA 1 cut(s) 865
KroI GCCGGC 1 cut(s) 470
KroNI GCCGGC 1 cut(s) 472
KspI CCGCGG 1 cut(s) 640
Kzo9I GATC 7 cut(s) 64, 79, 293, 556, 589, 813, 838
LmnI GCTCC 5 cut(s) 119, 278, 448, 856, 1126
Lsp1109I GCAGC 2 cut(s) 637, 989
LweI GCATC 1 cut(s) 121
MaeI CTAG 1 cut(s) 546
MaeII ACGT 5 cut(s) 75, 251, 321, 519, 541
MaeIII GTNAC 5 cut(s) 38, 599, 733, 823, 844
MalI GATC 7 cut(s) 66, 81, 295, 558, 591, 815, 840
MboI GATC 7 cut(s) 64, 79, 293, 556, 589, 813, 838
MboII GAAGA 2 cut(s) 937, 1019
MfeI CAATTG 1 cut(s) 697
MflI RGATCY 3 cut(s) 64, 813, 838
MhlI GDGCHC 4 cut(s) 58, 283, 486, 725
MluCI AATT 7 cut(s) 238, 450, 660, 697, 850, 897, 910
Mly113I GGCGCC 1 cut(s) 1119
MmeI TCCRAC 5 cut(s) 378, 544, 745, 933, 984
MroI TCCGGA 1 cut(s) 865
MroNI GCCGGC 1 cut(s) 470
MseI TTAA 6 cut(s) 60, 665, 780, 900, 1053, 1088
MslI CAYNNNNRTG 1 cut(s) 105
MspA1I CMGCKG 1 cut(s) 639
MspCI CTTAAG 1 cut(s) 1052
MspI CCGG 3 cut(s) 440, 471, 866
MspR9I CCNGG 4 cut(s) 382, 440, 987, 1123
MunI CAATTG 1 cut(s) 697
Mva1269I GAATGC 1 cut(s) 790
MvaI CCWGG 3 cut(s) 382, 987, 1123
MvnI CGCG 1 cut(s) 639
MwoI GCNNNNNNNGC 3 cut(s) 323, 410, 656
NaeI GCCGGC 1 cut(s) 472
NarI GGCGCC 1 cut(s) 1119
NciI CCSGG 1 cut(s) 440
NdeII GATC 7 cut(s) 64, 79, 293, 556, 589, 813, 838
NgoMIV GCCGGC 1 cut(s) 470
NlaIII CATG 5 cut(s) 729, 808, 950, 971, 1102
NlaIV GGNNCC 5 cut(s) 391, 444, 527, 858, 1120
NmuCI GTSAC 4 cut(s) 38, 733, 823, 844
PasI CCCWGGG 1 cut(s) 986
PctI GAATGC 1 cut(s) 790
PdiI GCCGGC 1 cut(s) 472
PfeI GAWTC 1 cut(s) 928
PflMI CCANNNNNTGG 1 cut(s) 21
PkrI GCNGC 5 cut(s) 89, 638, 641, 652, 979
PluTI GGCGCC 1 cut(s) 1122
Ppu21I YACGTR 1 cut(s) 252
PpuMI RGGWCCY 1 cut(s) 525
Psp5II RGGWCCY 1 cut(s) 525
Psp6I CCWGG 3 cut(s) 380, 985, 1121
PspGI CCWGG 3 cut(s) 380, 985, 1121
PspN4I GGNNCC 5 cut(s) 391, 444, 527, 858, 1120
PspPI GGNCC 1 cut(s) 525
PspPPI RGGWCCY 1 cut(s) 525
PsuI RGATCY 3 cut(s) 64, 813, 838
RsaI GTAC 4 cut(s) 254, 544, 945, 1021
RsaNI GTAC 4 cut(s) 253, 543, 944, 1020
RseI CAYNNNNRTG 1 cut(s) 105
SacII CCGCGG 1 cut(s) 640
SalI GTCGAC 1 cut(s) 416
SaqAI TTAA 6 cut(s) 60, 665, 780, 900, 1053, 1088
SatI GCNGC 5 cut(s) 88, 637, 640, 651, 978
Sau3AI GATC 7 cut(s) 64, 79, 293, 556, 589, 813, 838
Sau96I GGNCC 1 cut(s) 525
ScrFI CCNGG 4 cut(s) 382, 440, 987, 1123
SduI GDGCHC 4 cut(s) 58, 283, 486, 725
SfaNI GCATC 1 cut(s) 121
SfcI CTRYAG 1 cut(s) 1065
SfoI GGCGCC 1 cut(s) 1120
Sfr303I CCGCGG 1 cut(s) 640
SgrBI CCGCGG 1 cut(s) 640
SinI GGWCC 1 cut(s) 525
SmiMI CAYNNNNRTG 1 cut(s) 105
SmlI CTYRAG 1 cut(s) 1052
SmoI CTYRAG 1 cut(s) 1052
SpeI ACTAGT 1 cut(s) 545
Sse9I AATT 7 cut(s) 238, 450, 660, 697, 850, 897, 910
SsiI CCGC 8 cut(s) 85, 88, 326, 637, 639, 788, 820, 1015
SspDI GGCGCC 1 cut(s) 1118
SspMI CTAG 1 cut(s) 546
StyD4I CCNGG 4 cut(s) 380, 438, 985, 1121
StyI CCWWGG 1 cut(s) 354
TaaI ACNGT 9 cut(s) 33, 107, 488, 599, 907, 943, 997, 1024, 1049
TaiI ACGT 5 cut(s) 78, 254, 324, 522, 544
TaqI TCGA 4 cut(s) 78, 190, 244, 417
TasI AATT 7 cut(s) 238, 450, 660, 697, 850, 897, 910
TatI WGTACW 1 cut(s) 1019
TauI GCSGC 3 cut(s) 90, 639, 642
TfiI GAWTC 1 cut(s) 928
Tru1I TTAA 6 cut(s) 60, 665, 780, 900, 1053, 1088
Tru9I TTAA 6 cut(s) 60, 665, 780, 900, 1053, 1088
TscAI CASTG 3 cut(s) 649, 849, 1029
TseFI GTSAC 4 cut(s) 38, 733, 823, 844
TseI GCWGC 2 cut(s) 650, 977
Tsp45I GTSAC 4 cut(s) 38, 733, 823, 844
TspDTI ATGAA 7 cut(s) 89, 127, 354, 846, 888, 1074, 1087
TspRI CASTG 3 cut(s) 649, 849, 1029
Van91I CCANNNNNTGG 1 cut(s) 21
Vha464I CTTAAG 1 cut(s) 1052
VneI GTGCAC 1 cut(s) 482
VpaK11BI GGWCC 1 cut(s) 525
XagI CCTNNNNNAGG 1 cut(s) 358
XapI RAATTY 1 cut(s) 450
XcmI CCANNNNNNNNNTGG 2 cut(s) 256, 560
XmiI GTMKAC 1 cut(s) 417
XspI CTAG 1 cut(s) 546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.