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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g01680 FvH4_6g01700 |
| rosa_laevigata | RLG00000012435 RLG00000025827 |
| rosa_multiflora | Rmu_sc0010766.1_g000007 |
| rosa_roxburghii | Rroxscaffold_6G00427430 |
| rosa_rugosa | Rorug02G0621400 Rorug06G0194500 |
| rosa_samantha | Rh3AG019100 Rh3BG019500 Rh3CG018300 Rh3DG019600 Rh6AG304800 Rh6BG310800 Rh6CG318900 Rh6DG303800 |
| rosa_wichuraiana | Rw3G001520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 139, 207 |
| AciI | CCGC | 1 cut(s) | 414 |
| AcuI | CTGAAG | 1 cut(s) | 131 |
| AfaI | GTAC | 1 cut(s) | 62 |
| AgsI | TTSAA | 3 cut(s) | 38, 43, 323 |
| AjnI | CCWGG | 1 cut(s) | 302 |
| AluBI | AGCT | 2 cut(s) | 83, 245 |
| AluI | AGCT | 2 cut(s) | 83, 245 |
| AoxI | GGCC | 1 cut(s) | 299 |
| ApaI | GGGCCC | 1 cut(s) | 303 |
| AspS9I | GGNCC | 2 cut(s) | 299, 300 |
| AsuHPI | GGTGA | 1 cut(s) | 223 |
| BaeGI | GKGCMC | 1 cut(s) | 303 |
| BanII | GRGCYC | 3 cut(s) | 272, 303, 378 |
| BbsI | GAAGAC | 1 cut(s) | 438 |
| BccI | CCATC | 2 cut(s) | 185, 196 |
| BciT130I | CCWGG | 1 cut(s) | 304 |
| Bme1390I | CCNGG | 1 cut(s) | 304 |
| BmgT120I | GGNCC | 2 cut(s) | 299, 300 |
| BmiI | GGNNCC | 1 cut(s) | 301 |
| BmrFI | CCNGG | 1 cut(s) | 304 |
| BpiI | GAAGAC | 1 cut(s) | 438 |
| BsaJI | CCNNGG | 2 cut(s) | 302, 303 |
| Bse1I | ACTGG | 1 cut(s) | 350 |
| BseBI | CCWGG | 1 cut(s) | 304 |
| BseDI | CCNNGG | 2 cut(s) | 302, 303 |
| BseMII | CTCAG | 1 cut(s) | 237 |
| BseNI | ACTGG | 1 cut(s) | 350 |
| BseSI | GKGCMC | 1 cut(s) | 303 |
| BshFI | GGCC | 1 cut(s) | 301 |
| BsnI | GGCC | 1 cut(s) | 301 |
| Bsp120I | GGGCCC | 1 cut(s) | 299 |
| Bsp1286I | GDGCHC | 3 cut(s) | 272, 303, 378 |
| BspACI | CCGC | 1 cut(s) | 414 |
| BspANI | GGCC | 1 cut(s) | 301 |
| BspCNI | CTCAG | 1 cut(s) | 238 |
| BspHI | TCATGA | 1 cut(s) | 85 |
| BspLI | GGNNCC | 1 cut(s) | 301 |
| BsrI | ACTGG | 1 cut(s) | 350 |
| BssECI | CCNNGG | 2 cut(s) | 302, 303 |
| Bst2UI | CCWGG | 1 cut(s) | 304 |
| Bst4CI | ACNGT | 2 cut(s) | 94, 367 |
| BstC8I | GCNNGC | 1 cut(s) | 412 |
| BstDEI | CTNAG | 4 cut(s) | 116, 222, 246, 273 |
| BstNI | CCWGG | 1 cut(s) | 304 |
| BstNSI | RCATGY | 1 cut(s) | 414 |
| BstSCI | CCNGG | 1 cut(s) | 302 |
| BstSLI | GKGCMC | 1 cut(s) | 303 |
| BstV2I | GAAGAC | 1 cut(s) | 438 |
| BsuRI | GGCC | 1 cut(s) | 301 |
| BtsIMutI | CAGTG | 3 cut(s) | 333, 357, 372 |
| Cac8I | GCNNGC | 1 cut(s) | 412 |
| CciI | TCATGA | 1 cut(s) | 85 |
| Cfr13I | GGNCC | 2 cut(s) | 299, 300 |
| Csp6I | GTAC | 1 cut(s) | 61 |
| CviAII | CATG | 3 cut(s) | 86, 98, 411 |
| CviJI | RGCY | 7 cut(s) | 83, 151, 161, 245, 270, 301, 376 |
| CviKI_1 | RGCY | 7 cut(s) | 83, 151, 161, 245, 270, 301, 376 |
| CviQI | GTAC | 1 cut(s) | 61 |
| DdeI | CTNAG | 4 cut(s) | 116, 222, 246, 273 |
| Eco24I | GRGCYC | 3 cut(s) | 272, 303, 378 |
| Eco32I | GATATC | 1 cut(s) | 103 |
| Eco57I | CTGAAG | 1 cut(s) | 131 |
| EcoO109I | RGGNCCY | 2 cut(s) | 299, 300 |
| EcoRII | CCWGG | 1 cut(s) | 302 |
| EcoRV | GATATC | 1 cut(s) | 103 |
| EcoT38I | GRGCYC | 3 cut(s) | 272, 303, 378 |
| FaeI | CATG | 3 cut(s) | 89, 101, 414 |
| FaiI | YATR | 6 cut(s) | 29, 87, 99, 240, 336, 412 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 99, 131 |
| FatI | CATG | 3 cut(s) | 85, 97, 410 |
| FauI | CCCGC | 1 cut(s) | 407 |
| FblI | GTMKAC | 2 cut(s) | 139, 207 |
| FriOI | GRGCYC | 3 cut(s) | 272, 303, 378 |
| HaeIII | GGCC | 1 cut(s) | 301 |
| Hin1II | CATG | 3 cut(s) | 89, 101, 414 |
| HincII | GTYRAC | 1 cut(s) | 208 |
| HindII | GTYRAC | 1 cut(s) | 208 |
| HinfI | GANTC | 2 cut(s) | 175, 404 |
| HphI | GGTGA | 1 cut(s) | 223 |
| Hpy166II | GTNNAC | 4 cut(s) | 140, 169, 208, 370 |
| Hpy188III | TCNNGA | 2 cut(s) | 86, 179 |
| Hpy8I | GTNNAC | 4 cut(s) | 140, 169, 208, 370 |
| HpyAV | CCTTC | 4 cut(s) | 115, 155, 290, 412 |
| HpyCH4III | ACNGT | 2 cut(s) | 94, 367 |
| HpyCH4IV | ACGT | 1 cut(s) | 228 |
| HpyCH4V | TGCA | 1 cut(s) | 97 |
| HpyF3I | CTNAG | 4 cut(s) | 116, 222, 246, 273 |
| HpySE526I | ACGT | 1 cut(s) | 228 |
| Hsp92II | CATG | 3 cut(s) | 89, 101, 414 |
| LpnPI | CCDG | 4 cut(s) | 212, 289, 316, 363 |
| MaeII | ACGT | 1 cut(s) | 228 |
| MaeIII | GTNAC | 1 cut(s) | 229 |
| MboII | GAAGA | 2 cut(s) | 209, 443 |
| MhlI | GDGCHC | 3 cut(s) | 272, 303, 378 |
| MluCI | AATT | 1 cut(s) | 38 |
| MlyI | GAGTC | 1 cut(s) | 413 |
| MnlI | CCTC | 4 cut(s) | 68, 173, 243, 290 |
| MseI | TTAA | 2 cut(s) | 362, 399 |
| MspR9I | CCNGG | 1 cut(s) | 304 |
| MvaI | CCWGG | 1 cut(s) | 304 |
| NlaIII | CATG | 3 cut(s) | 89, 101, 414 |
| NlaIV | GGNNCC | 1 cut(s) | 301 |
| NmuCI | GTSAC | 1 cut(s) | 229 |
| NspI | RCATGY | 1 cut(s) | 414 |
| PaeI | GCATGC | 1 cut(s) | 414 |
| PagI | TCATGA | 1 cut(s) | 85 |
| PasI | CCCWGGG | 1 cut(s) | 303 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 162 |
| PfeI | GAWTC | 1 cut(s) | 175 |
| PleI | GAGTC | 1 cut(s) | 412 |
| PpsI | GAGTC | 1 cut(s) | 412 |
| Psp6I | CCWGG | 1 cut(s) | 302 |
| PspGI | CCWGG | 1 cut(s) | 302 |
| PspN4I | GGNNCC | 1 cut(s) | 301 |
| PspOMI | GGGCCC | 1 cut(s) | 299 |
| PspPI | GGNCC | 2 cut(s) | 299, 300 |
| RsaI | GTAC | 1 cut(s) | 62 |
| RsaNI | GTAC | 1 cut(s) | 61 |
| SalI | GTCGAC | 1 cut(s) | 206 |
| SaqAI | TTAA | 2 cut(s) | 362, 399 |
| Sau96I | GGNCC | 2 cut(s) | 299, 300 |
| SchI | GAGTC | 1 cut(s) | 413 |
| ScrFI | CCNGG | 1 cut(s) | 304 |
| SduI | GDGCHC | 3 cut(s) | 272, 303, 378 |
| SetI | ASST | 7 cut(s) | 79, 85, 147, 201, 231, 247, 282 |
| SphI | GCATGC | 1 cut(s) | 414 |
| Sse9I | AATT | 1 cut(s) | 38 |
| SsiI | CCGC | 1 cut(s) | 414 |
| StyD4I | CCNGG | 1 cut(s) | 302 |
| TaaI | ACNGT | 2 cut(s) | 94, 367 |
| TaiI | ACGT | 1 cut(s) | 231 |
| TaqI | TCGA | 3 cut(s) | 178, 207, 346 |
| TasI | AATT | 1 cut(s) | 38 |
| TfiI | GAWTC | 1 cut(s) | 175 |
| Tru1I | TTAA | 2 cut(s) | 362, 399 |
| Tru9I | TTAA | 2 cut(s) | 362, 399 |
| TscAI | CASTG | 3 cut(s) | 333, 357, 372 |
| TseFI | GTSAC | 1 cut(s) | 229 |
| Tsp45I | GTSAC | 1 cut(s) | 229 |
| TspDTI | ATGAA | 3 cut(s) | 22, 102, 309 |
| TspGWI | ACGGA | 1 cut(s) | 252 |
| TspRI | CASTG | 3 cut(s) | 333, 357, 372 |
| XceI | RCATGY | 1 cut(s) | 414 |
| XmiI | GTMKAC | 2 cut(s) | 139, 207 |