RLG00000012574

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
20012195 .. 20015301
3107 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012574

Sequence Viewer

Length: 369 bp
ATGGGAAATAAGCTAACAAGCAGCCATAATAGTTTTAAGTATAACCACAAGGTGTGTTCTGAGTACAGCAGCTTCTCTGTAAGAAGATATTGCTTTGTTGGATGCAAGTTCTTCTTTTTGGAAGTATCTGTTTCCACTAATATCTCCCCATTGACATCCGCTCTTGCAGACTATCAAGCTTGGTTTATTCATTATCTATCTACTTTATTTTGCTCATTAGCAAATGGAGCATATGTGTGCCATTCTGTTTATGATTACAGTTTAATCTCCAAGTTTTGTAATGGCAGTACTTCAATTTTTGCTTCATTGTCCTTTTACAACCACTATAAGAAAAATAGCCACTTCTATCGTCACAGGTCAAGTAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

123

Amino Acids

14.04

Weight (kDa)

9.18

Isoelectric Point (pI)

46.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 161
AciI CCGC 1 cut(s) 159
AdeI CACNNNGTG 1 cut(s) 52
AfaI GTAC 2 cut(s) 65, 289
AgsI TTSAA 1 cut(s) 294
AluBI AGCT 4 cut(s) 13, 72, 179, 366
AluI AGCT 4 cut(s) 13, 72, 179, 366
ApeKI GCWGC 2 cut(s) 21, 69
BarI GAAGNNNNNNTAC 2 cut(s) 56, 88
BbvI GCAGC 2 cut(s) 33, 81
BfaI CTAG 1 cut(s) 367
BisI GCNGC 2 cut(s) 22, 70
BlsI GCNGC 2 cut(s) 23, 71
BmcAI AGTACT 1 cut(s) 289
BmsI GCATC 1 cut(s) 92
BsaXI ACNNNNNCTCC 2 cut(s) 219, 249
BseGI GGATG 2 cut(s) 107, 155
BseMII CTCAG 1 cut(s) 51
BseXI GCAGC 2 cut(s) 33, 81
BspACI CCGC 1 cut(s) 159
BspCNI CTCAG 1 cut(s) 52
BsrBI CCGCTC 1 cut(s) 161
Bst4CI ACNGT 1 cut(s) 260
BstDEI CTNAG 1 cut(s) 60
BstF5I GGATG 2 cut(s) 107, 155
BstMWI GCNNNNNNNGC 1 cut(s) 227
BstV1I GCAGC 2 cut(s) 33, 81
BtsCI GGATG 2 cut(s) 107, 155
Csp6I GTAC 2 cut(s) 64, 288
CviJI RGCY 6 cut(s) 13, 24, 72, 179, 339, 366
CviKI_1 RGCY 6 cut(s) 13, 24, 72, 179, 339, 366
CviQI GTAC 2 cut(s) 64, 288
DdeI CTNAG 1 cut(s) 60
DraIII CACNNNGTG 1 cut(s) 52
FaiI YATR 6 cut(s) 27, 42, 232, 234, 252, 327
FalI AAGNNNNNCTT 2 cut(s) 98, 130
FauNDI CATATG 1 cut(s) 232
Fnu4HI GCNGC 2 cut(s) 22, 70
FokI GGATG 2 cut(s) 114, 142
Fsp4HI GCNGC 2 cut(s) 22, 70
FspBI CTAG 1 cut(s) 367
GluI GCNGC 2 cut(s) 22, 70
HindIII AAGCTT 1 cut(s) 177
Hpy188I TCNGA 1 cut(s) 61
HpyCH4III ACNGT 1 cut(s) 260
HpyCH4V TGCA 2 cut(s) 105, 167
HpyF10VI GCNNNNNNNGC 1 cut(s) 227
HpyF3I CTNAG 1 cut(s) 60
LmnI GCTCC 1 cut(s) 227
LpnPI CCDG 1 cut(s) 340
Lsp1109I GCAGC 2 cut(s) 33, 81
LweI GCATC 1 cut(s) 92
MaeI CTAG 1 cut(s) 367
MaeIII GTNAC 1 cut(s) 350
MbiI CCGCTC 1 cut(s) 161
MboII GAAGA 2 cut(s) 96, 103
MluCI AATT 1 cut(s) 294
MmeI TCCRAC 1 cut(s) 79
MseI TTAA 2 cut(s) 36, 263
MslI CAYNNNNRTG 1 cut(s) 235
MwoI GCNNNNNNNGC 1 cut(s) 227
NdeI CATATG 1 cut(s) 232
NmuCI GTSAC 1 cut(s) 350
PkrI GCNGC 2 cut(s) 23, 71
RsaI GTAC 2 cut(s) 65, 289
RsaNI GTAC 2 cut(s) 64, 288
RseI CAYNNNNRTG 1 cut(s) 235
SaqAI TTAA 2 cut(s) 36, 263
SatI GCNGC 2 cut(s) 22, 70
ScaI AGTACT 1 cut(s) 289
SetI ASST 6 cut(s) 15, 54, 74, 181, 359, 368
SfaNI GCATC 1 cut(s) 92
SgeI CNNG 7 cut(s) 30, 61, 118, 176, 188, 192, 283
SmiMI CAYNNNNRTG 1 cut(s) 235
Sse9I AATT 1 cut(s) 294
SsiI CCGC 1 cut(s) 159
SspMI CTAG 1 cut(s) 367
TaaI ACNGT 1 cut(s) 260
TasI AATT 1 cut(s) 294
TatI WGTACW 2 cut(s) 63, 287
Tru1I TTAA 2 cut(s) 36, 263
Tru9I TTAA 2 cut(s) 36, 263
TseFI GTSAC 1 cut(s) 350
TseI GCWGC 2 cut(s) 21, 69
Tsp45I GTSAC 1 cut(s) 350
TspDTI ATGAA 2 cut(s) 179, 294
XspI CTAG 1 cut(s) 367
ZrmI AGTACT 1 cut(s) 289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.