Rh1BG298300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Reverse (-)
43323349 .. 43323935
587 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG298300.1

Sequence Viewer

Length: 288 bp
ATGGCGTGGATTGTTGAGAGTGATATTGAGGTCTGGTTCGAAACAGAGCAGGTGAGATATGGGCTTCCCCGGACGAGAAGGAATGTGAGATTGGAGGAAGGGAAGTCGAGGGTGACGCTGAGGTCATCGAAGGGGAAGGATATACCATCATCACTGATGGAGGAGTCTGAGTGCCTGAACTTGAAGATGATATTTCAGACTACTTTGGGCTTTATCTCTACTAATCAATGCGGAGGGAAAAAGTGCCGACTTCAACACCAAATGAACGGAAATGACTACATTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

95

Amino Acids

11.03

Weight (kDa)

7.71

Isoelectric Point (pI)

56.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 40
AasI GACNNNNNNGTC 1 cut(s) 121
Acc36I ACCTGC 1 cut(s) 40
AciI CCGC 1 cut(s) 231
AgsI TTSAA 2 cut(s) 184, 254
AjuI GAANNNNNNNTTGG 2 cut(s) 74, 106
AsuC2I CCSGG 1 cut(s) 70
AsuHPI GGTGA 2 cut(s) 64, 124
AsuII TTCGAA 1 cut(s) 39
BbvCI CCTCAGC 1 cut(s) 119
BccI CCATC 2 cut(s) 151, 154
BcnI CCSGG 1 cut(s) 70
BfuAI ACCTGC 1 cut(s) 40
Bme1390I CCNGG 1 cut(s) 70
BmrFI CCNGG 1 cut(s) 70
Bpu10I CCTNAGC 1 cut(s) 119
Bpu14I TTCGAA 1 cut(s) 39
BpuMI CCSGG 1 cut(s) 70
BsaJI CCNNGG 1 cut(s) 68
BsaXI ACNNNNNCTCC 2 cut(s) 155, 185
BseDI CCNNGG 1 cut(s) 68
BseMII CTCAG 2 cut(s) 110, 159
BseRI GAGGAG 1 cut(s) 176
BsiSI CCGG 1 cut(s) 70
Bsp119I TTCGAA 1 cut(s) 39
BspACI CCGC 1 cut(s) 231
BspCNI CTCAG 2 cut(s) 111, 160
BspMI ACCTGC 1 cut(s) 40
BspT104I TTCGAA 1 cut(s) 39
BssECI CCNNGG 1 cut(s) 68
BstBI TTCGAA 1 cut(s) 39
BstDEI CTNAG 2 cut(s) 119, 168
BstSCI CCNGG 1 cut(s) 68
BtsIMutI CAGTG 1 cut(s) 152
BveI ACCTGC 1 cut(s) 40
CseI GACGC 1 cut(s) 124
CviJI RGCY 2 cut(s) 64, 210
CviKI_1 RGCY 2 cut(s) 64, 210
DdeI CTNAG 2 cut(s) 119, 168
DrdI GACNNNNNNGTC 1 cut(s) 121
DseDI GACNNNNNNGTC 1 cut(s) 121
FaiI YATR 2 cut(s) 60, 143
HapII CCGG 1 cut(s) 70
HgaI GACGC 1 cut(s) 124
HinfI GANTC 1 cut(s) 164
HpaII CCGG 1 cut(s) 70
HphI GGTGA 2 cut(s) 64, 124
Hpy188I TCNGA 2 cut(s) 169, 198
HpyAV CCTTC 4 cut(s) 72, 92, 124, 130
HpyF3I CTNAG 2 cut(s) 119, 168
LpnPI CCDG 4 cut(s) 19, 35, 83, 188
MaeIII GTNAC 1 cut(s) 112
MboII GAAGA 1 cut(s) 196
MlyI GAGTC 1 cut(s) 173
MnlI CCTC 6 cut(s) 22, 88, 102, 114, 154, 227
MseI TTAA 1 cut(s) 286
MspI CCGG 1 cut(s) 70
MspR9I CCNGG 1 cut(s) 70
NciI CCSGG 1 cut(s) 70
NmuCI GTSAC 1 cut(s) 112
NspV TTCGAA 1 cut(s) 39
PaqCI CACCTGC 1 cut(s) 40
PleI GAGTC 1 cut(s) 172
PpsI GAGTC 1 cut(s) 172
SaqAI TTAA 1 cut(s) 286
SchI GAGTC 1 cut(s) 173
ScrFI CCNGG 1 cut(s) 70
SetI ASST 3 cut(s) 33, 54, 125
SfuI TTCGAA 1 cut(s) 39
SgeI CNNG 9 cut(s) 18, 46, 62, 81, 82, 87, 120, 187, 193
SsiI CCGC 1 cut(s) 231
StyD4I CCNGG 1 cut(s) 68
TaqI TCGA 3 cut(s) 39, 107, 128
Tru1I TTAA 1 cut(s) 286
Tru9I TTAA 1 cut(s) 286
TscAI CASTG 1 cut(s) 159
TseFI GTSAC 1 cut(s) 112
Tsp45I GTSAC 1 cut(s) 112
TspDTI ATGAA 1 cut(s) 278
TspGWI ACGGA 1 cut(s) 282
TspRI CASTG 1 cut(s) 159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.