Polysaccharide biosynthesis protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0399501 RchiOBHm_Chr7g0216271 |
| rosa_laevigata | RLG00000001578 RLG00000012574 RLG00000022818 |
| rosa_multiflora | Rmu_sc0001360.1_g000004 Rmu_sc0006531.1_g000002 Rmu_sc0019504.1_g000005 |
| rosa_samantha | Rh1BG298300 |
| rosa_wichuraiana | Rw1G011870 Rw3G026520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 441 |
| AarI | CACCTGC | 1 cut(s) | 16 |
| Acc36I | ACCTGC | 1 cut(s) | 16 |
| AfaI | GTAC | 1 cut(s) | 179 |
| AflIII | ACRYGT | 1 cut(s) | 119 |
| AgsI | TTSAA | 4 cut(s) | 17, 106, 169, 457 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 50, 82 |
| AluBI | AGCT | 2 cut(s) | 433, 453 |
| AluI | AGCT | 2 cut(s) | 433, 453 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 433 |
| AoxI | GGCC | 1 cut(s) | 420 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 215 |
| AsuC2I | CCSGG | 1 cut(s) | 46 |
| AsuHPI | GGTGA | 3 cut(s) | 40, 166, 328 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 161, 193 |
| BbsI | GAAGAC | 1 cut(s) | 176 |
| BccI | CCATC | 5 cut(s) | 145, 185, 304, 313, 319 |
| BcnI | CCSGG | 1 cut(s) | 46 |
| BfaI | CTAG | 1 cut(s) | 447 |
| BfuAI | ACCTGC | 1 cut(s) | 16 |
| Bme1390I | CCNGG | 1 cut(s) | 46 |
| BmrFI | CCNGG | 1 cut(s) | 46 |
| BmsI | GCATC | 1 cut(s) | 403 |
| BpiI | GAAGAC | 1 cut(s) | 176 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 65, 97 |
| BpmI | CTGGAG | 1 cut(s) | 67 |
| BpuMI | CCSGG | 1 cut(s) | 46 |
| BsaBI | GATNNNNATC | 1 cut(s) | 441 |
| BsaJI | CCNNGG | 1 cut(s) | 44 |
| BsaWI | WCCGGW | 1 cut(s) | 9 |
| Bse8I | GATNNNNATC | 1 cut(s) | 441 |
| BseDI | CCNNGG | 1 cut(s) | 44 |
| BseGI | GGATG | 1 cut(s) | 315 |
| BseJI | GATNNNNATC | 1 cut(s) | 441 |
| BseMII | CTCAG | 1 cut(s) | 53 |
| BseRI | GAGGAG | 2 cut(s) | 86, 253 |
| BshFI | GGCC | 1 cut(s) | 422 |
| BsiSI | CCGG | 2 cut(s) | 10, 46 |
| BsnI | GGCC | 1 cut(s) | 422 |
| Bsp143I | GATC | 1 cut(s) | 98 |
| BspANI | GGCC | 1 cut(s) | 422 |
| BspCNI | CTCAG | 1 cut(s) | 54 |
| BspMI | ACCTGC | 1 cut(s) | 16 |
| BssECI | CCNNGG | 1 cut(s) | 44 |
| BssMI | GATC | 1 cut(s) | 98 |
| Bst4CI | ACNGT | 1 cut(s) | 280 |
| Bst6I | CTCTTC | 1 cut(s) | 293 |
| BstDEI | CTNAG | 2 cut(s) | 62, 389 |
| BstF5I | GGATG | 1 cut(s) | 315 |
| BstKTI | GATC | 1 cut(s) | 101 |
| BstMBI | GATC | 1 cut(s) | 98 |
| BstNSI | RCATGY | 1 cut(s) | 123 |
| BstSCI | CCNGG | 1 cut(s) | 44 |
| BstV2I | GAAGAC | 1 cut(s) | 176 |
| BsuRI | GGCC | 1 cut(s) | 422 |
| BtsCI | GGATG | 1 cut(s) | 315 |
| BtsIMutI | CAGTG | 1 cut(s) | 404 |
| BveI | ACCTGC | 1 cut(s) | 16 |
| CaiI | CAGNNNCTG | 1 cut(s) | 433 |
| Csp6I | GTAC | 1 cut(s) | 178 |
| CviAII | CATG | 2 cut(s) | 120, 174 |
| CviJI | RGCY | 4 cut(s) | 40, 422, 433, 453 |
| CviKI_1 | RGCY | 4 cut(s) | 40, 422, 433, 453 |
| CviQI | GTAC | 1 cut(s) | 178 |
| DdeI | CTNAG | 2 cut(s) | 62, 389 |
| DpnI | GATC | 1 cut(s) | 100 |
| DpnII | GATC | 1 cut(s) | 98 |
| Eam1104I | CTCTTC | 1 cut(s) | 293 |
| EarI | CTCTTC | 1 cut(s) | 293 |
| FaeI | CATG | 2 cut(s) | 123, 177 |
| FaiI | YATR | 7 cut(s) | 121, 175, 351, 384, 408, 441, 469 |
| FatI | CATG | 2 cut(s) | 119, 173 |
| FokI | GGATG | 1 cut(s) | 322 |
| FspBI | CTAG | 1 cut(s) | 447 |
| GsuI | CTGGAG | 1 cut(s) | 67 |
| HaeIII | GGCC | 1 cut(s) | 422 |
| HapII | CCGG | 2 cut(s) | 10, 46 |
| Hin1II | CATG | 2 cut(s) | 123, 177 |
| HindIII | AAGCTT | 1 cut(s) | 451 |
| HinfI | GANTC | 1 cut(s) | 58 |
| HpaII | CCGG | 2 cut(s) | 10, 46 |
| HphI | GGTGA | 3 cut(s) | 40, 166, 328 |
| Hpy188I | TCNGA | 1 cut(s) | 63 |
| Hpy188III | TCNNGA | 1 cut(s) | 84 |
| HpyAV | CCTTC | 2 cut(s) | 325, 412 |
| HpyCH4III | ACNGT | 1 cut(s) | 280 |
| HpyF3I | CTNAG | 2 cut(s) | 62, 389 |
| Hsp92II | CATG | 2 cut(s) | 123, 177 |
| Kzo9I | GATC | 1 cut(s) | 98 |
| LmnI | GCTCC | 1 cut(s) | 430 |
| LpnPI | CCDG | 8 cut(s) | 11, 23, 59, 97, 201, 255, 413, 419 |
| LweI | GCATC | 1 cut(s) | 403 |
| MaeI | CTAG | 1 cut(s) | 447 |
| MalI | GATC | 1 cut(s) | 100 |
| MboI | GATC | 1 cut(s) | 98 |
| MboII | GAAGA | 6 cut(s) | 122, 181, 220, 265, 310, 469 |
| MluCI | AATT | 1 cut(s) | 114 |
| MnlI | CCTC | 9 cut(s) | 64, 67, 150, 231, 234, 267, 294, 331, 337 |
| MroXI | GAANNNNTTC | 1 cut(s) | 215 |
| MspI | CCGG | 2 cut(s) | 10, 46 |
| MspR9I | CCNGG | 1 cut(s) | 46 |
| NciI | CCSGG | 1 cut(s) | 46 |
| NdeII | GATC | 1 cut(s) | 98 |
| NlaIII | CATG | 2 cut(s) | 123, 177 |
| NspI | RCATGY | 1 cut(s) | 123 |
| PaqCI | CACCTGC | 1 cut(s) | 16 |
| PciI | ACATGT | 1 cut(s) | 119 |
| PdmI | GAANNNNTTC | 1 cut(s) | 215 |
| PfeI | GAWTC | 1 cut(s) | 58 |
| PscI | ACATGT | 1 cut(s) | 119 |
| PsiI | TTATAA | 1 cut(s) | 441 |
| PstNI | CAGNNNCTG | 1 cut(s) | 433 |
| RsaI | GTAC | 1 cut(s) | 179 |
| RsaNI | GTAC | 1 cut(s) | 178 |
| Sau3AI | GATC | 1 cut(s) | 98 |
| ScrFI | CCNGG | 1 cut(s) | 46 |
| SetI | ASST | 9 cut(s) | 30, 161, 245, 336, 342, 348, 373, 435, 455 |
| SfaNI | GCATC | 1 cut(s) | 403 |
| Sse9I | AATT | 1 cut(s) | 114 |
| SspMI | CTAG | 1 cut(s) | 447 |
| StyD4I | CCNGG | 1 cut(s) | 44 |
| TaaI | ACNGT | 1 cut(s) | 280 |
| TasI | AATT | 1 cut(s) | 114 |
| TfiI | GAWTC | 1 cut(s) | 58 |
| TscAI | CASTG | 1 cut(s) | 404 |
| TspRI | CASTG | 1 cut(s) | 404 |
| XceI | RCATGY | 1 cut(s) | 123 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 430 |
| XmnI | GAANNNNTTC | 1 cut(s) | 215 |
| XspI | CTAG | 1 cut(s) | 447 |