Rmu_sc0019504.1_g000005

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019504.1
Physical Location & Seq
Forward (+)
12397 .. 12714
318 bp
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UTR
Exon/CDS
Intron
Rmu_sc0019504.1_g000005.1.cds

Sequence Viewer

Length: 318 bp
atgacagtgttgcctgagaagttcggctataattctgggttcttcttctttttggaagtatctgttttcactatctccacaccgacatcggttcttgcagactgtcaatgtggttttcggttcaattttcagtctatgttgggtttctgtttgattacacttaacaaaacctgttttttgctttccgattttgttgaaacagaagaagaggaggaggaggaagaagaagaagaagaagaagagggagacgggaagaagttgtcgctcgattcgaacaaatcatctcaggtattctatgatgggttcgaatttgtttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

105

Amino Acids

12.06

Weight (kDa)

4.05

Isoelectric Point (pI)

69.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 308
AgsI TTSAA 2 cut(s) 124, 197
Alw26I GTCTC 1 cut(s) 240
ApoI RAATTY 1 cut(s) 308
AsuII TTCGAA 2 cut(s) 272, 306
BccI CCATC 1 cut(s) 293
BcoDI GTCTC 1 cut(s) 240
Bpu14I TTCGAA 2 cut(s) 272, 306
BseMII CTCAG 2 cut(s) 6, 299
BseRI GAGGAG 3 cut(s) 224, 227, 230
BsmAI GTCTC 1 cut(s) 240
BsmBI CGTCTC 1 cut(s) 240
Bsp119I TTCGAA 2 cut(s) 272, 306
BspCNI CTCAG 2 cut(s) 7, 298
BspT104I TTCGAA 2 cut(s) 272, 306
Bst4CI ACNGT 2 cut(s) 7, 104
Bst6I CTCTTC 2 cut(s) 201, 234
BstBI TTCGAA 2 cut(s) 272, 306
BstDEI CTNAG 2 cut(s) 15, 285
BstMAI GTCTC 1 cut(s) 240
BtsIMutI CAGTG 1 cut(s) 12
CviJI RGCY 1 cut(s) 27
CviKI_1 RGCY 1 cut(s) 27
DdeI CTNAG 2 cut(s) 15, 285
Eam1104I CTCTTC 2 cut(s) 201, 234
EarI CTCTTC 2 cut(s) 201, 234
Esp3I CGTCTC 1 cut(s) 240
FaiI YATR 3 cut(s) 30, 137, 297
HinfI GANTC 1 cut(s) 269
Hpy188I TCNGA 1 cut(s) 187
HpyCH4III ACNGT 2 cut(s) 7, 104
HpyCH4V TGCA 1 cut(s) 98
HpyF3I CTNAG 2 cut(s) 15, 285
LpnPI CCDG 4 cut(s) 21, 27, 184, 272
MluCI AATT 3 cut(s) 31, 124, 308
MnlI CCTC 5 cut(s) 202, 205, 208, 211, 235
MseI TTAA 1 cut(s) 162
NspV TTCGAA 2 cut(s) 272, 306
PcsI WCGNNNNNNNCGW 1 cut(s) 269
PfeI GAWTC 1 cut(s) 269
SaqAI TTAA 1 cut(s) 162
SetI ASST 2 cut(s) 173, 291
SfuI TTCGAA 2 cut(s) 272, 306
SgeI CNNG 7 cut(s) 26, 48, 107, 183, 262, 278, 299
Sse9I AATT 3 cut(s) 31, 124, 308
TaaI ACNGT 2 cut(s) 7, 104
TaqI TCGA 3 cut(s) 267, 272, 306
TasI AATT 3 cut(s) 31, 124, 308
TfiI GAWTC 1 cut(s) 269
Tru1I TTAA 1 cut(s) 162
Tru9I TTAA 1 cut(s) 162
TscAI CASTG 1 cut(s) 12
TspRI CASTG 1 cut(s) 12
XapI RAATTY 1 cut(s) 308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.