Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0006153

Physical Location & Seq

Genomic Coordinates Forward (+)

7635598 .. 7641410

Gene Structure 5813 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016557

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGGCCAGAGCTTATAGTACATTGGTAGCTTGCCCTTCCTTGGTGTTCGGAGCGCAAGTAGGTGGAGAGGGGATTGGTGATTTGAACTATTTGATGCTAGTCTCGACTCCAAAGGCTCGAGTGCGGAGGGCACTTCAACCTCGACCATCAGGGGAGGTTACGTCTAGTACTAAAGATGTAGCTGAGGATGATAGTCATGAGGGTCATGTGACAGTGGAATCGGTGAGGGAAGGAAAGGCTAGTGCAGATGGCCTGGAAGTCAGCGAGGAAGGTCAAAACCATGAACCTTCAACTGGGGAGCTGGTATTGGTTACGAAGACTCCAGTGGCTGAGATGAGTTTCGGCACAGAAAAAGACTATGAATTTCTGGAGAAGATCGGTTTGGCTACGGAAAATCCTGGTGGGTTCATAAATGGCAAGTGGAAGGCAACTGGCCCAGTTATCTCTACTTTCAATCCTGCAGACAATCAGGAAATTGCTAAGGTCACGGAAGTGTCTATAGAGGACTATGAGGAGGGCATTCGTGCTTGCAGTGAAGCATCCAAGTTATGGAAGACTCTCACGGCACCGAAGAGAGGTGACATTGTTAGACAGATAGGAGATGCATTAAGGGCCAAATTGGACTATCTGGGTAGGCTTGTATCCCTCGAGATGGGGAAAATACTTGCTGAAGGAATTGGGGAAGTTCAGGAAGTTATCGATATGTGTGATTTTTGTGTTGGATTGAGCCGTCAACTGAATGGATCTGTCATACCCTCAGAACGTCCAAATCACATGATGTTTGAGGTTTGGAATCCATTGGGAATAGTTGGTGTCATCACTGCTTTCAATTTCCCATGTGCTGTTCTTGGATGGAATGCCTGCATTGCACTTGTCTGTGGTAACTGCGTTGTCTGGAAGGGTGCACCAACAACTCCATTGGTAACTATTGCTGTGACAAAGCTAATTGCCGAGGTTCTTGAGAAAAACACCTTGCCCGGGGCTATATTCACCTCTTTCTGTGGTGGAGCTGAAGTTGGTGAAGCAATAGCAAAAGACAATAGAATACCCCTGGTTTCATTCACTGGAAGTTCAAAGGTGGGTCAGAAGGTTCAACGAATTGTCAGTGAGAGGTTTGGTAAATGCTTACTTGAATTAAGTGGGAACAACGCCTTAATTGTTATGGATGATGCTGACATCGAGCTGGCAGTGCGTTCTATATTGTTTGCGGCTGTTGGTACTGCTGGTCAGCGCTGCACAACGTGCCGTAGATTGTATCTTCATGAAAGTATATATCAGAATGTATTAGATAAACTAGTCGGACTTTACAAGCAAGTCAAGATTGGGAACCCCTTGGAGAAAGGAACTCTAGTTGGGCCACTACATACTCACCAGTCGAAGGAGAATTTTGAGAAGGGGATTGGGGCCATTAAATCTCAGGGGGGAAAGATTGCTGTAGGTGGATCGACTGTAGGGTCAGATGGCAATTATGTGCAGCCAACAATTGTTGAGATTTCTCCAACTGCAGCTGTGGTGAAAGAAGAGTTGTTTGGTCCAGTTCTGTATGTTATGAGATTCAAGAGTCTTGATGAAGCAATAGAATTGAACAACTCCGTACCACAAGGATTAAGTAGCTCAATCTTCACAAGAAAACCAGAAATTCTCTTTAAATGGATTGGGCCACAGGGCAGTGATTGTGGTATAGTGAATGTAAACATTCCTACTAATGGCGCTGAGATTGGCGGTGCCTTTGGTGGAGAGAAGGCGACTGGTGGTGGCCGAGAAGCAGGGAGCGACTCTTGGAAGCAATACATGAGACGCTCAACATGTACAATCAATTATGGGAGCGAACTACCACTTGCTCAAGGAAGCGCATTCTGCAGTAGCCGCTATCAAGATTATGATTCCCCTACCAGCTTGAATATGTTCAATGAAGCCTGCACTGATCGTTATGATGTTTGGTGCAAGACTATTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004029 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006081 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009269 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010035 GO:0016491 GO:0016620 GO:0016903 GO:0033993 GO:0042221 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071704 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00010 ko00053 ko00071 ko00260 ko00280 ko00310 ko00330 ko00340 ko00380 ko00410 ko00561 ko00620 ko01100 ko01110 ko01120 ko01130 map00010 map00053 map00071 map00260 map00280 map00310 map00330 map00340 map00380 map00410 map00561 map00620 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Aldedh

Protein Analysis

653

Amino Acids

70.02

Weight (kDa)

5.32

Isoelectric Point (pI)

34.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldedh	PF00171	147 - 600	4.1e-133	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0006153)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54100 AT1G54100
fragaria_vesca	FvH4_1g08890 FvH4_1g08890 FvH4_1g08890 FvH4_1g08890
malus_domestica	MD02G1094300.v1.1 MD15G1219200.v1.1
prunus_persica	Prupe.7G196700_v2.0.a1 Prupe.7G196700_v2.0.a1 Prupe.7G196700_v2.0.a1 Prupe.7G196700_v2.0.a1
pyrus_communis	pycom02g07450 pycom02g07460 pycom15g19430 pycom15g19450
rosa_chinensis	RchiOBHm_Chr2g0095351
rosa_laevigata	RLG00000016557
rosa_multiflora	Rmu_sc0024400.1_g000001 Rmu_sc0041866.1_g000003
rosa_roxburghii	Rroxscaffold_2G00146450
rosa_rugosa	Rorug02G0049900
rosa_samantha	Rh2AG098100 Rh2BG099300 Rh2CG101300 Rh2DG098900
rosa_wichuraiana	Rw2G007400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1453
AccB1I	GGYRCC	2 cut(s)	565, 1724
AccB7I	CCANNNNNTGG	1 cut(s)	549
AciI	CCGC	4 cut(s)	124, 1208, 1722, 1867
AclWI	GGATC	2 cut(s)	751, 1450
AcoI	YGGCCR	2 cut(s)	3, 1756
AcsI	RAATTY	3 cut(s)	362, 1384, 1638
AcuI	CTGAAG	2 cut(s)	690, 1032
AdeI	CACNNNGTG	1 cut(s)	1242
AfaI	GTAC	5 cut(s)	19, 169, 1219, 1596, 1810
AfeI	AGCGCT	1 cut(s)	1232
AfiI	CCNNNNNNNGG	8 cut(s)	40, 293, 549, 575, 652, 978, 1378, 1706
AflIII	ACRYGT	1 cut(s)	1805
AhlI	ACTAGT	1 cut(s)	1294
AjnI	CCWGG	3 cut(s)	252, 397, 1050
AjuI	GAANNNNNNNTTGG	4 cut(s)	365, 397, 1512, 1544
AleI	CACNNNNGTG	1 cut(s)	491
Alw21I	GWGCWC	1 cut(s)	907
Alw26I	GTCTC	2 cut(s)	106, 1789
Alw44I	GTGCAC	1 cut(s)	903
AlwI	GGATC	2 cut(s)	751, 1450
AlwNI	CAGNNNCTG	1 cut(s)	329
Ama87I	CYCGRG	3 cut(s)	117, 647, 977
Aor51HI	AGCGCT	1 cut(s)	1232
AoxI	GGCC	8 cut(s)	3, 250, 433, 612, 1355, 1404, 1658, 1756
ApaLI	GTGCAC	1 cut(s)	903
ApeKI	GCWGC	3 cut(s)	1233, 1474, 1505
ApoI	RAATTY	3 cut(s)	362, 1384, 1638
Asp700I	GAANNNNTTC	1 cut(s)	1904
AspLEI	GCGC	4 cut(s)	55, 1233, 1712, 1853
AspS9I	GGNCC	6 cut(s)	434, 612, 1355, 1404, 1532, 1658
AsuC2I	CCSGG	2 cut(s)	978, 979
AsuHPI	GGTGA	7 cut(s)	89, 235, 590, 982, 1031, 1361, 1525
AvaI	CYCGRG	3 cut(s)	117, 647, 977
AvaII	GGWCC	1 cut(s)	1532
BaeGI	GKGCMC	2 cut(s)	133, 907
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	2 cut(s)	565, 1724
BbsI	GAAGAC	2 cut(s)	323, 560
Bbv12I	GWGCWC	1 cut(s)	907
BbvCI	CCTCAGC	1 cut(s)	183
BbvI	GCAGC	3 cut(s)	1220, 1486, 1517
BccI	CCATC	5 cut(s)	154, 242, 646, 846, 1454
BceAI	ACGGC	3 cut(s)	579, 714, 1230
BciT130I	CCWGG	3 cut(s)	254, 399, 1052
BciVI	GTATCC	1 cut(s)	652
BcnI	CCSGG	2 cut(s)	978, 979
BcoDI	GTCTC	2 cut(s)	106, 1789
BcuI	ACTAGT	1 cut(s)	1294
BfaI	CTAG	5 cut(s)	98, 165, 240, 1295, 1349
BfmI	CTRYAG	6 cut(s)	459, 498, 1434, 1449, 1503, 1858
BfoI	RGCGCY	2 cut(s)	1234, 1713
BfuI	GTATCC	1 cut(s)	652
BisI	GCNGC	5 cut(s)	1209, 1234, 1475, 1506, 1867
BlsI	GCNGC	5 cut(s)	1210, 1235, 1476, 1507, 1868
BmcAI	AGTACT	1 cut(s)	169
Bme1390I	CCNGG	5 cut(s)	254, 399, 978, 979, 1052
Bme18I	GGWCC	1 cut(s)	1532
BmeT110I	CYCGRG	3 cut(s)	117, 647, 977
BmgT120I	GGNCC	6 cut(s)	434, 612, 1355, 1404, 1532, 1658
BmiI	GGNNCC	4 cut(s)	567, 1328, 1405, 1726
BmrFI	CCNGG	5 cut(s)	254, 399, 978, 979, 1052
BmrI	ACTGGG	2 cut(s)	303, 431
BmsI	GCATC	4 cut(s)	84, 548, 592, 1159
BmuI	ACTGGG	2 cut(s)	303, 431
BpiI	GAAGAC	2 cut(s)	323, 560
BpmI	CTGGAG	2 cut(s)	306, 389
Bpu10I	CCTNAGC	2 cut(s)	183, 480
BpuEI	CTTGAG	2 cut(s)	980, 1827
BpuMI	CCSGG	2 cut(s)	978, 979
Bsa29I	ATCGAT	1 cut(s)	699
BsaJI	CCNNGG	6 cut(s)	39, 951, 977, 978, 1050, 1332
BsaXI	ACNNNNNCTCC	8 cut(s)	42, 72, 146, 176, 304, 334, 999, 1029
Bsc4I	CCNNNNNNNGG	8 cut(s)	40, 293, 549, 575, 652, 978, 1378, 1706
Bse1I	ACTGG	8 cut(s)	298, 323, 436, 437, 1069, 1372, 1535, 1753
Bse3DI	GCAATG	1 cut(s)	864
BseBI	CCWGG	3 cut(s)	254, 399, 1052
BseCI	ATCGAT	1 cut(s)	699
BseDI	CCNNGG	6 cut(s)	39, 951, 977, 978, 1050, 1332
BseGI	GGATG	4 cut(s)	193, 539, 857, 1171
BseLI	CCNNNNNNNGG	8 cut(s)	40, 293, 549, 575, 652, 978, 1378, 1706
BseMI	GCAATG	1 cut(s)	864
BseMII	CTCAG	5 cut(s)	174, 321, 771, 1430, 1704
BseNI	ACTGG	8 cut(s)	298, 323, 436, 437, 1069, 1372, 1535, 1753
BseRI	GAGGAG	1 cut(s)	527
BseSI	GKGCMC	2 cut(s)	133, 907
BseXI	GCAGC	3 cut(s)	1220, 1486, 1517
BsgI	GTGCAG	4 cut(s)	264, 1219, 1493, 1903
BshFI	GGCC	8 cut(s)	5, 252, 435, 614, 1357, 1406, 1660, 1758
BshNI	GGYRCC	2 cut(s)	565, 1724
BshVI	ATCGAT	1 cut(s)	699
BsiHKAI	GWGCWC	1 cut(s)	907
BsiHKCI	CYCGRG	3 cut(s)	117, 647, 977
BsiSI	CCGG	1 cut(s)	978
BslI	CCNNNNNNNGG	8 cut(s)	40, 293, 549, 575, 652, 978, 1378, 1706
BsmAI	GTCTC	2 cut(s)	106, 1789
BsmBI	CGTCTC	1 cut(s)	1789
BsmI	GAATGC	3 cut(s)	519, 862, 1853
BsnI	GGCC	8 cut(s)	5, 252, 435, 614, 1357, 1406, 1660, 1758
BsoBI	CYCGRG	3 cut(s)	117, 647, 977
Bsp1286I	GDGCHC	2 cut(s)	133, 907
Bsp1407I	TGTACA	1 cut(s)	1808
Bsp143I	GATC	4 cut(s)	375, 743, 1442, 1924
BspACI	CCGC	4 cut(s)	124, 1208, 1722, 1867
BspANI	GGCC	8 cut(s)	5, 252, 435, 614, 1357, 1406, 1660, 1758
BspCNI	CTCAG	5 cut(s)	175, 322, 770, 1429, 1705
BspDI	ATCGAT	1 cut(s)	699
BspHI	TCATGA	2 cut(s)	196, 1261
BspLI	GGNNCC	4 cut(s)	567, 1328, 1405, 1726
BspMAI	CTGCAG	3 cut(s)	463, 1507, 1862
BspPI	GGATC	2 cut(s)	751, 1450
BspT107I	GGYRCC	2 cut(s)	565, 1724
BsrDI	GCAATG	1 cut(s)	864
BsrGI	TGTACA	1 cut(s)	1808
BsrI	ACTGG	8 cut(s)	298, 323, 436, 437, 1069, 1372, 1535, 1753
BssECI	CCNNGG	6 cut(s)	39, 951, 977, 978, 1050, 1332
BssMI	GATC	4 cut(s)	375, 743, 1442, 1924
BssT1I	CCWWGG	2 cut(s)	39, 1332
Bst2UI	CCWGG	3 cut(s)	254, 399, 1052
Bst4CI	ACNGT	2 cut(s)	214, 1450
Bst6I	CTCTTC	2 cut(s)	566, 1515
BstAPI	GCANNNNNTGC	1 cut(s)	1242
BstAUI	TGTACA	1 cut(s)	1808
BstC8I	GCNNGC	5 cut(s)	31, 529, 862, 1185, 1918
BstDEI	CTNAG	6 cut(s)	183, 330, 480, 757, 1416, 1713
BstF5I	GGATG	4 cut(s)	193, 539, 857, 1171
BstH2I	RGCGCY	2 cut(s)	1234, 1713
BstHHI	GCGC	4 cut(s)	55, 1233, 1712, 1853
BstKTI	GATC	4 cut(s)	378, 746, 1445, 1927
BstMAI	GTCTC	2 cut(s)	106, 1789
BstMBI	GATC	4 cut(s)	375, 743, 1442, 1924
BstMWI	GCNNNNNNNGC	6 cut(s)	611, 866, 1189, 1242, 1857, 1866
BstNI	CCWGG	3 cut(s)	254, 399, 1052
BstNSI	RCATGY	1 cut(s)	1809
BstSCI	CCNGG	5 cut(s)	252, 397, 976, 977, 1050
BstSFI	CTRYAG	6 cut(s)	459, 498, 1434, 1449, 1503, 1858
BstSLI	GKGCMC	2 cut(s)	133, 907
BstV1I	GCAGC	3 cut(s)	1220, 1486, 1517
BstV2I	GAAGAC	2 cut(s)	323, 560
BstX2I	RGATCY	1 cut(s)	743
BstYI	RGATCY	1 cut(s)	743
Bsu15I	ATCGAT	1 cut(s)	699
BsuI	GTATCC	1 cut(s)	652
BsuRI	GGCC	8 cut(s)	5, 252, 435, 614, 1357, 1406, 1660, 1758
BsuTUI	ATCGAT	1 cut(s)	699
BtsCI	GGATG	4 cut(s)	193, 539, 857, 1171
BtsI	GCAGTG	4 cut(s)	538, 819, 1194, 1675
BtsIMutI	CAGTG	9 cut(s)	219, 330, 538, 819, 1062, 1111, 1194, 1675, 1920
Cac8I	GCNNGC	5 cut(s)	31, 529, 862, 1185, 1918
CaiI	CAGNNNCTG	1 cut(s)	329
CciI	TCATGA	2 cut(s)	196, 1261
CfoI	GCGC	4 cut(s)	55, 1233, 1712, 1853
Cfr13I	GGNCC	6 cut(s)	434, 612, 1355, 1404, 1532, 1658
Cfr9I	CCCGGG	1 cut(s)	977
ClaI	ATCGAT	1 cut(s)	699
CseI	GACGC	1 cut(s)	1806
Csp6I	GTAC	5 cut(s)	18, 168, 1218, 1595, 1809
CviAII	CATG	8 cut(s)	197, 206, 281, 775, 837, 1262, 1792, 1806
CviQI	GTAC	5 cut(s)	18, 168, 1218, 1595, 1809
DdeI	CTNAG	6 cut(s)	183, 330, 480, 757, 1416, 1713
DpnI	GATC	4 cut(s)	377, 745, 1444, 1926
DpnII	GATC	4 cut(s)	375, 743, 1442, 1924
DraI	TTTAAA	1 cut(s)	1648
DraIII	CACNNNGTG	1 cut(s)	1242
DrdI	GACNNNNNNGTC	1 cut(s)	1453
DseDI	GACNNNNNNGTC	1 cut(s)	1453
EaeI	YGGCCR	2 cut(s)	3, 1756
Eam1104I	CTCTTC	2 cut(s)	566, 1515
EarI	CTCTTC	2 cut(s)	566, 1515
Eco130I	CCWWGG	2 cut(s)	39, 1332
Eco47I	GGWCC	1 cut(s)	1532
Eco47III	AGCGCT	1 cut(s)	1232
Eco57I	CTGAAG	2 cut(s)	690, 1032
Eco88I	CYCGRG	3 cut(s)	117, 647, 977
EcoRII	CCWGG	3 cut(s)	252, 397, 1050
EcoT14I	CCWWGG	2 cut(s)	39, 1332
EcoT22I	ATGCAT	1 cut(s)	607
ErhI	CCWWGG	2 cut(s)	39, 1332
Esp3I	CGTCTC	1 cut(s)	1789
FaeI	CATG	8 cut(s)	200, 209, 284, 778, 840, 1265, 1795, 1809
FatI	CATG	8 cut(s)	196, 205, 280, 774, 836, 1261, 1791, 1805
Fnu4HI	GCNGC	5 cut(s)	1209, 1234, 1475, 1506, 1867
FokI	GGATG	4 cut(s)	200, 526, 864, 1178
Fsp4HI	GCNGC	5 cut(s)	1209, 1234, 1475, 1506, 1867
FspBI	CTAG	5 cut(s)	98, 165, 240, 1295, 1349
GlaI	GCGC	4 cut(s)	54, 1232, 1711, 1852
GluI	GCNGC	5 cut(s)	1209, 1234, 1475, 1506, 1867
GsuI	CTGGAG	2 cut(s)	306, 389
HaeII	RGCGCY	2 cut(s)	1234, 1713
HaeIII	GGCC	8 cut(s)	5, 252, 435, 614, 1357, 1406, 1660, 1758
HapII	CCGG	1 cut(s)	978
HgaI	GACGC	1 cut(s)	1806
HhaI	GCGC	4 cut(s)	55, 1233, 1712, 1853
Hin1II	CATG	8 cut(s)	200, 209, 284, 778, 840, 1265, 1795, 1809
Hin6I	GCGC	4 cut(s)	53, 1231, 1710, 1851
HinP1I	GCGC	4 cut(s)	53, 1231, 1710, 1851
HincII	GTYRAC	1 cut(s)	734
HindII	GTYRAC	1 cut(s)	734
HinfI	GANTC	9 cut(s)	106, 218, 319, 556, 793, 1554, 1561, 1775, 1883
HpaII	CCGG	1 cut(s)	978
HphI	GGTGA	7 cut(s)	89, 235, 590, 982, 1031, 1361, 1525
Hpy166II	GTNNAC	3 cut(s)	734, 905, 1693
Hpy188I	TCNGA	6 cut(s)	50, 760, 1086, 1278, 1301, 1459
Hpy8I	GTNNAC	3 cut(s)	734, 905, 1693
HpyCH4III	ACNGT	2 cut(s)	214, 1450
HpyCH4IV	ACGT	3 cut(s)	161, 763, 1241
HpyF10VI	GCNNNNNNNGC	6 cut(s)	611, 866, 1189, 1242, 1857, 1866
HpyF3I	CTNAG	6 cut(s)	183, 330, 480, 757, 1416, 1713
HpySE526I	ACGT	3 cut(s)	161, 763, 1241
Hsp92II	CATG	8 cut(s)	200, 209, 284, 778, 840, 1265, 1795, 1809
HspAI	GCGC	4 cut(s)	53, 1231, 1710, 1851
Kzo9I	GATC	4 cut(s)	375, 743, 1442, 1924
LmnI	GCTCC	5 cut(s)	50, 298, 1007, 1770, 1824
Lsp1109I	GCAGC	3 cut(s)	1220, 1486, 1517
LweI	GCATC	4 cut(s)	84, 548, 592, 1159
MaeI	CTAG	5 cut(s)	98, 165, 240, 1295, 1349
MaeII	ACGT	3 cut(s)	161, 763, 1241
MaeIII	GTNAC	8 cut(s)	157, 208, 310, 484, 578, 881, 922, 934
MalI	GATC	4 cut(s)	377, 745, 1444, 1926
MboI	GATC	4 cut(s)	375, 743, 1442, 1924
MboII	GAAGA	7 cut(s)	328, 385, 565, 583, 1250, 1532, 1612
MfeI	CAATTG	1 cut(s)	1482
MflI	RGATCY	1 cut(s)	743
MhlI	GDGCHC	2 cut(s)	133, 907
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	5 cut(s)	100, 313, 550, 1570, 1769
MmeI	TCCRAC	3 cut(s)	700, 1279, 1523
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	607
MroXI	GAANNNNTTC	1 cut(s)	1904
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	6 cut(s)	608, 1136, 1154, 1410, 1607, 1647
MslI	CAYNNNNRTG	1 cut(s)	491
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	1508
MspI	CCGG	1 cut(s)	978
MspR9I	CCNGG	5 cut(s)	254, 399, 978, 979, 1052
MunI	CAATTG	1 cut(s)	1482
Mva1269I	GAATGC	3 cut(s)	519, 862, 1853
MvaI	CCWGG	3 cut(s)	254, 399, 1052
MwoI	GCNNNNNNNGC	6 cut(s)	611, 866, 1189, 1242, 1857, 1866
NciI	CCSGG	2 cut(s)	978, 979
NdeII	GATC	4 cut(s)	375, 743, 1442, 1924
NlaIII	CATG	8 cut(s)	200, 209, 284, 778, 840, 1265, 1795, 1809
NlaIV	GGNNCC	4 cut(s)	567, 1328, 1405, 1726
NmeAIII	GCCGAG	2 cut(s)	976, 1784
NmuCI	GTSAC	4 cut(s)	208, 484, 578, 934
NsiI	ATGCAT	1 cut(s)	607
NspI	RCATGY	1 cut(s)	1809
OliI	CACNNNNGTG	1 cut(s)	491
PaeR7I	CTCGAG	2 cut(s)	117, 647
PagI	TCATGA	2 cut(s)	196, 1261
PciI	ACATGT	1 cut(s)	1805
PctI	GAATGC	3 cut(s)	519, 862, 1853
PdmI	GAANNNNTTC	1 cut(s)	1904
PfeI	GAWTC	4 cut(s)	218, 793, 1554, 1883
PflMI	CCANNNNNTGG	1 cut(s)	549
PkrI	GCNGC	5 cut(s)	1210, 1235, 1476, 1507, 1868
PleI	GAGTC	5 cut(s)	100, 313, 550, 1569, 1769
PpsI	GAGTC	5 cut(s)	100, 313, 550, 1569, 1769
PscI	ACATGT	1 cut(s)	1805
Psp6I	CCWGG	3 cut(s)	252, 397, 1050
PspGI	CCWGG	3 cut(s)	252, 397, 1050
PspN4I	GGNNCC	4 cut(s)	567, 1328, 1405, 1726
PspPI	GGNCC	6 cut(s)	434, 612, 1355, 1404, 1532, 1658
PspXI	VCTCGAGB	1 cut(s)	117
PstI	CTGCAG	3 cut(s)	463, 1507, 1862
PstNI	CAGNNNCTG	1 cut(s)	329
PsuI	RGATCY	1 cut(s)	743
PvuII	CAGCTG	1 cut(s)	1508
RsaI	GTAC	5 cut(s)	19, 169, 1219, 1596, 1810
RsaNI	GTAC	5 cut(s)	18, 168, 1218, 1595, 1809
RseI	CAYNNNNRTG	1 cut(s)	491
SaqAI	TTAA	6 cut(s)	608, 1136, 1154, 1410, 1607, 1647
SatI	GCNGC	5 cut(s)	1209, 1234, 1475, 1506, 1867
Sau3AI	GATC	4 cut(s)	375, 743, 1442, 1924
Sau96I	GGNCC	6 cut(s)	434, 612, 1355, 1404, 1532, 1658
ScaI	AGTACT	1 cut(s)	169
SchI	GAGTC	5 cut(s)	100, 313, 550, 1570, 1769
ScrFI	CCNGG	5 cut(s)	254, 399, 978, 979, 1052
SduI	GDGCHC	2 cut(s)	133, 907
SfaNI	GCATC	4 cut(s)	84, 548, 592, 1159
SfcI	CTRYAG	6 cut(s)	459, 498, 1434, 1449, 1503, 1858
Sfr274I	CTCGAG	2 cut(s)	117, 647
SinI	GGWCC	1 cut(s)	1532
SlaI	CTCGAG	2 cut(s)	117, 647
SmaI	CCCGGG	1 cut(s)	979
SmiMI	CAYNNNNRTG	1 cut(s)	491
SmlI	CTYRAG	4 cut(s)	117, 647, 959, 1842
SmoI	CTYRAG	4 cut(s)	117, 647, 959, 1842
SpeI	ACTAGT	1 cut(s)	1294
SsiI	CCGC	4 cut(s)	124, 1208, 1722, 1867
SspMI	CTAG	5 cut(s)	98, 165, 240, 1295, 1349
StyD4I	CCNGG	5 cut(s)	252, 397, 976, 977, 1050
StyI	CCWWGG	2 cut(s)	39, 1332
TaaI	ACNGT	2 cut(s)	214, 1450
TaiI	ACGT	3 cut(s)	164, 766, 1244
TaqI	TCGA	8 cut(s)	104, 118, 142, 648, 699, 1179, 1376, 1445
TatI	WGTACW	3 cut(s)	17, 167, 1808
TauI	GCSGC	2 cut(s)	1211, 1869
TfiI	GAWTC	4 cut(s)	218, 793, 1554, 1883
Tru1I	TTAA	6 cut(s)	608, 1136, 1154, 1410, 1607, 1647
Tru9I	TTAA	6 cut(s)	608, 1136, 1154, 1410, 1607, 1647
TscAI	CASTG	9 cut(s)	219, 330, 538, 826, 1069, 1111, 1194, 1675, 1927
TseFI	GTSAC	4 cut(s)	208, 484, 578, 934
TseI	GCWGC	3 cut(s)	1233, 1474, 1505
Tsp45I	GTSAC	4 cut(s)	208, 484, 578, 934
TspDTI	ATGAA	8 cut(s)	297, 375, 397, 1047, 1250, 1278, 1584, 1926
TspGWI	ACGGA	3 cut(s)	404, 503, 1582
TspMI	CCCGGG	1 cut(s)	977
TspRI	CASTG	9 cut(s)	219, 330, 538, 826, 1069, 1111, 1194, 1675, 1927
Van91I	CCANNNNNTGG	1 cut(s)	549
VneI	GTGCAC	1 cut(s)	903
VpaK11BI	GGWCC	1 cut(s)	1532
XapI	RAATTY	3 cut(s)	362, 1384, 1638
XceI	RCATGY	1 cut(s)	1809
XhoI	CTCGAG	2 cut(s)	117, 647
XmaI	CCCGGG	1 cut(s)	977
XmnI	GAANNNNTTC	1 cut(s)	1904
XspI	CTAG	5 cut(s)	98, 165, 240, 1295, 1349
ZrmI	AGTACT	1 cut(s)	169
Zsp2I	ATGCAT	1 cut(s)	607

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.