Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0006153

Physical Location & Seq

Genomic Coordinates Forward (+)

8326507 .. 8332426

Gene Structure 5920 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG098100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGAGTTTCGGCACAGAAAAAGACTATGAATTTCTGGAGAAGATCGGTTTGGCTACGGAAAATCCTGGTGGGTTCATAAATGGCAACTGGAAGGCAACTGGCCCAGTTATCTCTACTTTCAATCCTGCAGACGATCAGGAGATTGCTAAGGTCACGGAAGTGTCTATAGAGGACTATGAGGAGGGCATTCGTGCTTGCAGTGAAGCATCCAAGTTATGGAAGACTCTCACAGCACCAAAGAGAGGTGACATTGTTAGACAGATAGGAGATGCATTAAGGGCCAAATTGGACTATCTGGGTAGGCTTGTATCCCTCGAGATGGGGAAAATACTTGCTGAAGGAATTGGGGAAGTTCAGGAAGTTATCGATATGTGTGATTTTTGTGTGGGATTGAGCCGTCAACTGAATGGATCTATCATACCCTCAGAACGTCCAAATCACATGATGTTTGAGGTTTGGAATCCATTGGGAATAGTTGGTGTTATCACTGCTTTCAATTTCCCATGTGCTGTTCTTGGATGGAATGCCTGCGTTGCGCTTGTCTGTGGTAACTGTGTTGTTTGGAAGGGTGCACCAACAACTCCATTGGTAACTATTGCTGTGACAAAGCTAATTGCTGAGGTTCTTGAGAAAAATAACTTGCCCGGGGCTATATTCACCGCTTTCTGTGGTGGAGCTGAAGTTGGTGAAGCATTAGCAAAAGACAACAGAATACCCCTGGTTTCATTCACTGGAAGTTCAAAGGTGGGTCAGAAGGTTCAACGAATTGTCAGTGAGAGGTTTGGTAAATGCTTACTTGAATTAAGTGGGAACAACGCCATAATTGTTATGGATGATGCTGACATCGAGCTGGCAGTGCGTTCTATATTGTTTGCAGCCGTTGGTACTGCTGGTCAGCGCTGCACAACGTGCCGTAGATTGTATCTTCATGAAAGTATATATCAGAATGTGTTAGATAAACTAGTCGGACTTTACAAGCAAGTCAAGATTGGGAACCCTTTGGAGAAAGGAACTCTAGTTGGGCCACTACATACTCACCAGTCGAAGGAGAATTTTGAGAAGGGGATTGGGGCCATTAAATCTCAGGGGGGAAAGATTGCTGTAGGTGGATCGACTGTAGGTTCAGATGGCAATTATGTGCAGCCAACAATTGTTGAGATTTCTCCAACTGCAGCTGTGGTGAAAGAAGAGTTGTTTGGTCCAGTTCTGTATGTTATGAAATTCAAGAGTCTTGATGAAGCAATAGAATTGAACAACTCCGTACCACAAGGATTAAGTAGCTCAATCTTCACAAGAAAACCAGAAATTCTCTTTAAATGGATTGGGCCACAGGGCAGTGATTGTGGTATAGTGAATGTAAACATTCCTACTAATGGCGCTGAGATTGGCGGTGCCTTTGGTGGAGAGAAGGCAACTGGTGGTGGCCGAGAGGCAGGGAGCGACTCTTGGAAGCAATACATGAGACGCTCAACATGTACAATCAATTATGGGAGCGAACTACCACTCGCTCAGGGTATCAATTTCGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004029 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006081 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009269 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010035 GO:0016491 GO:0016620 GO:0016903 GO:0033993 GO:0042221 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071704 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00010 ko00053 ko00071 ko00260 ko00280 ko00310 ko00330 ko00340 ko00380 ko00410 ko00561 ko00620 ko01100 ko01110 ko01120 ko01130 map00010 map00053 map00071 map00260 map00280 map00310 map00330 map00340 map00380 map00410 map00561 map00620 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Aldedh

Protein Analysis

509

Amino Acids

54.56

Weight (kDa)

5.57

Isoelectric Point (pI)

30.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldedh	PF00171	36 - 490	1.6e-133	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006153)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54100 AT1G54100
fragaria_vesca	FvH4_1g08890 FvH4_1g08890 FvH4_1g08890 FvH4_1g08890
malus_domestica	MD02G1094300.v1.1 MD15G1219200.v1.1
prunus_persica	Prupe.7G196700_v2.0.a1 Prupe.7G196700_v2.0.a1 Prupe.7G196700_v2.0.a1 Prupe.7G196700_v2.0.a1
pyrus_communis	pycom02g07450 pycom02g07460 pycom15g19430 pycom15g19450
rosa_chinensis	RchiOBHm_Chr2g0095351
rosa_laevigata	RLG00000016557
rosa_multiflora	Rmu_sc0024400.1_g000001 Rmu_sc0041866.1_g000003
rosa_roxburghii	Rroxscaffold_2G00146450
rosa_rugosa	Rorug02G0049900
rosa_samantha	Rh2AG098100 Rh2BG099300 Rh2CG101300 Rh2DG098900
rosa_wichuraiana	Rw2G007400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1391
AccB7I	CCANNNNNTGG	1 cut(s)	216
AciI	CCGC	2 cut(s)	660, 1389
AclWI	GGATC	2 cut(s)	418, 1117
AcoI	YGGCCR	1 cut(s)	1423
AcsI	RAATTY	4 cut(s)	29, 1051, 1220, 1305
AcuI	CTGAAG	2 cut(s)	357, 699
AdeI	CACNNNGTG	1 cut(s)	909
AfaI	GTAC	3 cut(s)	886, 1263, 1477
AfeI	AGCGCT	1 cut(s)	899
AfiI	CCNNNNNNNGG	5 cut(s)	216, 242, 319, 1045, 1373
AflIII	ACRYGT	1 cut(s)	1472
AgsI	TTSAA	7 cut(s)	121, 496, 741, 761, 800, 1225, 1252
AhlI	ACTAGT	1 cut(s)	961
AjnI	CCWGG	2 cut(s)	64, 717
AjuI	GAANNNNNNNTTGG	4 cut(s)	32, 64, 1179, 1211
AleI	CACNNNNGTG	1 cut(s)	158
AluBI	AGCT	5 cut(s)	610, 677, 850, 1175, 1281
AluI	AGCT	5 cut(s)	610, 677, 850, 1175, 1281
Alw21I	GWGCWC	1 cut(s)	574
Alw26I	GTCTC	1 cut(s)	1456
Alw44I	GTGCAC	1 cut(s)	570
AlwI	GGATC	2 cut(s)	418, 1117
Ama87I	CYCGRG	2 cut(s)	314, 644
Aor51HI	AGCGCT	1 cut(s)	899
AoxI	GGCC	6 cut(s)	100, 279, 1022, 1071, 1325, 1423
ApaLI	GTGCAC	1 cut(s)	570
ApeKI	GCWGC	4 cut(s)	875, 900, 1141, 1172
ApoI	RAATTY	4 cut(s)	29, 1051, 1220, 1305
AspLEI	GCGC	3 cut(s)	538, 900, 1379
AspS9I	GGNCC	6 cut(s)	101, 279, 1022, 1071, 1199, 1325
AsuC2I	CCSGG	2 cut(s)	645, 646
AsuHPI	GGTGA	5 cut(s)	257, 649, 698, 1028, 1192
AvaI	CYCGRG	2 cut(s)	314, 644
AvaII	GGWCC	1 cut(s)	1199
BaeGI	GKGCMC	1 cut(s)	574
BanI	GGYRCC	1 cut(s)	1391
BbsI	GAAGAC	1 cut(s)	227
Bbv12I	GWGCWC	1 cut(s)	574
BbvCI	CCTCAGC	1 cut(s)	618
BbvI	GCAGC	4 cut(s)	887, 887, 1153, 1184
BccI	CCATC	3 cut(s)	313, 513, 1121
BceAI	ACGGC	3 cut(s)	381, 863, 897
BciT130I	CCWGG	2 cut(s)	66, 719
BciVI	GTATCC	1 cut(s)	319
BcnI	CCSGG	2 cut(s)	645, 646
BcoDI	GTCTC	1 cut(s)	1456
BcuI	ACTAGT	1 cut(s)	961
BfaI	CTAG	3 cut(s)	962, 1016, 1528
BfmI	CTRYAG	5 cut(s)	126, 165, 1101, 1116, 1170
BfoI	RGCGCY	2 cut(s)	901, 1380
BfuI	GTATCC	1 cut(s)	319
BisI	GCNGC	4 cut(s)	876, 901, 1142, 1173
BlsI	GCNGC	4 cut(s)	877, 902, 1143, 1174
Bme1390I	CCNGG	4 cut(s)	66, 645, 646, 719
Bme18I	GGWCC	1 cut(s)	1199
BmeT110I	CYCGRG	2 cut(s)	314, 644
BmgT120I	GGNCC	6 cut(s)	101, 279, 1022, 1071, 1199, 1325
BmiI	GGNNCC	3 cut(s)	995, 1072, 1393
BmrFI	CCNGG	4 cut(s)	66, 645, 646, 719
BmrI	ACTGGG	1 cut(s)	98
BmsI	GCATC	3 cut(s)	215, 259, 826
BmuI	ACTGGG	1 cut(s)	98
BpiI	GAAGAC	1 cut(s)	227
BpmI	CTGGAG	1 cut(s)	56
Bpu10I	CCTNAGC	3 cut(s)	147, 618, 1509
BpuEI	CTTGAG	1 cut(s)	647
BpuMI	CCSGG	2 cut(s)	645, 646
Bsa29I	ATCGAT	1 cut(s)	366
BsaJI	CCNNGG	3 cut(s)	644, 645, 717
BsaXI	ACNNNNNCTCC	2 cut(s)	666, 696
Bsc4I	CCNNNNNNNGG	5 cut(s)	216, 242, 319, 1045, 1373
Bse1I	ACTGG	7 cut(s)	92, 103, 104, 736, 1039, 1202, 1420
BseBI	CCWGG	2 cut(s)	66, 719
BseCI	ATCGAT	1 cut(s)	366
BseDI	CCNNGG	3 cut(s)	644, 645, 717
BseGI	GGATG	3 cut(s)	206, 524, 838
BseLI	CCNNNNNNNGG	5 cut(s)	216, 242, 319, 1045, 1373
BseMII	CTCAG	5 cut(s)	438, 609, 1097, 1371, 1523
BseNI	ACTGG	7 cut(s)	92, 103, 104, 736, 1039, 1202, 1420
BseRI	GAGGAG	1 cut(s)	194
BseSI	GKGCMC	1 cut(s)	574
BseXI	GCAGC	4 cut(s)	887, 887, 1153, 1184
BsgI	GTGCAG	2 cut(s)	886, 1160
BshFI	GGCC	6 cut(s)	102, 281, 1024, 1073, 1327, 1425
BshNI	GGYRCC	1 cut(s)	1391
BshVI	ATCGAT	1 cut(s)	366
BsiHKAI	GWGCWC	1 cut(s)	574
BsiHKCI	CYCGRG	2 cut(s)	314, 644
BsiSI	CCGG	1 cut(s)	645
BslI	CCNNNNNNNGG	5 cut(s)	216, 242, 319, 1045, 1373
BsmAI	GTCTC	1 cut(s)	1456
BsmBI	CGTCTC	1 cut(s)	1456
BsmI	GAATGC	2 cut(s)	186, 529
BsnI	GGCC	6 cut(s)	102, 281, 1024, 1073, 1327, 1425
BsoBI	CYCGRG	2 cut(s)	314, 644
Bsp1286I	GDGCHC	1 cut(s)	574
Bsp1407I	TGTACA	1 cut(s)	1475
Bsp143I	GATC	4 cut(s)	42, 133, 410, 1109
BspACI	CCGC	2 cut(s)	660, 1389
BspANI	GGCC	6 cut(s)	102, 281, 1024, 1073, 1327, 1425
BspCNI	CTCAG	5 cut(s)	437, 610, 1096, 1372, 1522
BspDI	ATCGAT	1 cut(s)	366
BspHI	TCATGA	1 cut(s)	928
BspLI	GGNNCC	3 cut(s)	995, 1072, 1393
BspMAI	CTGCAG	2 cut(s)	130, 1174
BspPI	GGATC	2 cut(s)	418, 1117
BspT107I	GGYRCC	1 cut(s)	1391
BsrGI	TGTACA	1 cut(s)	1475
BsrI	ACTGG	7 cut(s)	92, 103, 104, 736, 1039, 1202, 1420
BssECI	CCNNGG	3 cut(s)	644, 645, 717
BssMI	GATC	4 cut(s)	42, 133, 410, 1109
Bst2UI	CCWGG	2 cut(s)	66, 719
Bst4CI	ACNGT	2 cut(s)	554, 1117
Bst6I	CTCTTC	1 cut(s)	1182
BstAPI	GCANNNNNTGC	1 cut(s)	909
BstAUI	TGTACA	1 cut(s)	1475
BstC8I	GCNNGC	3 cut(s)	196, 529, 852
BstDEI	CTNAG	6 cut(s)	147, 424, 618, 1083, 1380, 1509
BstF5I	GGATG	3 cut(s)	206, 524, 838
BstH2I	RGCGCY	2 cut(s)	901, 1380
BstHHI	GCGC	3 cut(s)	538, 900, 1379
BstKTI	GATC	4 cut(s)	45, 136, 413, 1112
BstMAI	GTCTC	1 cut(s)	1456
BstMBI	GATC	4 cut(s)	42, 133, 410, 1109
BstMWI	GCNNNNNNNGC	4 cut(s)	278, 533, 856, 909
BstNI	CCWGG	2 cut(s)	66, 719
BstNSI	RCATGY	1 cut(s)	1476
BstSCI	CCNGG	4 cut(s)	64, 643, 644, 717
BstSFI	CTRYAG	5 cut(s)	126, 165, 1101, 1116, 1170
BstSLI	GKGCMC	1 cut(s)	574
BstV1I	GCAGC	4 cut(s)	887, 887, 1153, 1184
BstV2I	GAAGAC	1 cut(s)	227
BstX2I	RGATCY	1 cut(s)	410
BstYI	RGATCY	1 cut(s)	410
Bsu15I	ATCGAT	1 cut(s)	366
BsuI	GTATCC	1 cut(s)	319
BsuRI	GGCC	6 cut(s)	102, 281, 1024, 1073, 1327, 1425
BsuTUI	ATCGAT	1 cut(s)	366
BtsCI	GGATG	3 cut(s)	206, 524, 838
BtsI	GCAGTG	4 cut(s)	205, 486, 861, 1342
BtsIMutI	CAGTG	6 cut(s)	205, 486, 729, 778, 861, 1342
Cac8I	GCNNGC	3 cut(s)	196, 529, 852
CciI	TCATGA	1 cut(s)	928
CfoI	GCGC	3 cut(s)	538, 900, 1379
Cfr13I	GGNCC	6 cut(s)	101, 279, 1022, 1071, 1199, 1325
Cfr9I	CCCGGG	1 cut(s)	644
ClaI	ATCGAT	1 cut(s)	366
CseI	GACGC	1 cut(s)	1473
Csp6I	GTAC	3 cut(s)	885, 1262, 1476
CviAII	CATG	5 cut(s)	442, 504, 929, 1459, 1473
CviQI	GTAC	3 cut(s)	885, 1262, 1476
DdeI	CTNAG	6 cut(s)	147, 424, 618, 1083, 1380, 1509
DpnI	GATC	4 cut(s)	44, 135, 412, 1111
DpnII	GATC	4 cut(s)	42, 133, 410, 1109
DraI	TTTAAA	1 cut(s)	1315
DraIII	CACNNNGTG	1 cut(s)	909
EaeI	YGGCCR	1 cut(s)	1423
Eam1104I	CTCTTC	1 cut(s)	1182
EarI	CTCTTC	1 cut(s)	1182
Eco47I	GGWCC	1 cut(s)	1199
Eco47III	AGCGCT	1 cut(s)	899
Eco57I	CTGAAG	2 cut(s)	357, 699
Eco88I	CYCGRG	2 cut(s)	314, 644
EcoRII	CCWGG	2 cut(s)	64, 717
EcoT22I	ATGCAT	1 cut(s)	274
Esp3I	CGTCTC	1 cut(s)	1456
FaeI	CATG	5 cut(s)	445, 507, 932, 1462, 1476
FatI	CATG	5 cut(s)	441, 503, 928, 1458, 1472
Fnu4HI	GCNGC	4 cut(s)	876, 901, 1142, 1173
FokI	GGATG	3 cut(s)	193, 531, 845
Fsp4HI	GCNGC	4 cut(s)	876, 901, 1142, 1173
FspBI	CTAG	3 cut(s)	962, 1016, 1528
GlaI	GCGC	3 cut(s)	537, 899, 1378
GluI	GCNGC	4 cut(s)	876, 901, 1142, 1173
GsuI	CTGGAG	1 cut(s)	56
HaeII	RGCGCY	2 cut(s)	901, 1380
HaeIII	GGCC	6 cut(s)	102, 281, 1024, 1073, 1327, 1425
HapII	CCGG	1 cut(s)	645
HgaI	GACGC	1 cut(s)	1473
HhaI	GCGC	3 cut(s)	538, 900, 1379
Hin1II	CATG	5 cut(s)	445, 507, 932, 1462, 1476
Hin6I	GCGC	3 cut(s)	536, 898, 1377
HinP1I	GCGC	3 cut(s)	536, 898, 1377
HincII	GTYRAC	1 cut(s)	401
HindII	GTYRAC	1 cut(s)	401
HinfI	GANTC	4 cut(s)	223, 460, 1228, 1442
HpaII	CCGG	1 cut(s)	645
HphI	GGTGA	5 cut(s)	257, 649, 698, 1028, 1192
Hpy166II	GTNNAC	3 cut(s)	401, 572, 1360
Hpy188I	TCNGA	5 cut(s)	427, 753, 945, 968, 1126
Hpy188III	TCNNGA	9 cut(s)	35, 137, 316, 356, 626, 929, 985, 1225, 1232
Hpy8I	GTNNAC	3 cut(s)	401, 572, 1360
HpyAV	CCTTC	7 cut(s)	85, 332, 559, 748, 1039, 1054, 1402
HpyCH4III	ACNGT	2 cut(s)	554, 1117
HpyCH4IV	ACGT	2 cut(s)	430, 908
HpyCH4V	TGCA	8 cut(s)	128, 198, 272, 572, 875, 903, 1141, 1172
HpyF10VI	GCNNNNNNNGC	4 cut(s)	278, 533, 856, 909
HpyF3I	CTNAG	6 cut(s)	147, 424, 618, 1083, 1380, 1509
HpySE526I	ACGT	2 cut(s)	430, 908
Hsp92II	CATG	5 cut(s)	445, 507, 932, 1462, 1476
HspAI	GCGC	3 cut(s)	536, 898, 1377
Kzo9I	GATC	4 cut(s)	42, 133, 410, 1109
LmnI	GCTCC	3 cut(s)	674, 1437, 1491
Lsp1109I	GCAGC	4 cut(s)	887, 887, 1153, 1184
LweI	GCATC	3 cut(s)	215, 259, 826
MaeI	CTAG	3 cut(s)	962, 1016, 1528
MaeII	ACGT	2 cut(s)	430, 908
MaeIII	GTNAC	5 cut(s)	151, 245, 548, 589, 601
MalI	GATC	4 cut(s)	44, 135, 412, 1111
MboI	GATC	4 cut(s)	42, 133, 410, 1109
MboII	GAAGA	5 cut(s)	52, 232, 917, 1199, 1279
MfeI	CAATTG	1 cut(s)	1149
MflI	RGATCY	1 cut(s)	410
MhlI	GDGCHC	1 cut(s)	574
MlyI	GAGTC	3 cut(s)	217, 1237, 1436
MmeI	TCCRAC	2 cut(s)	946, 1190
Mph1103I	ATGCAT	1 cut(s)	274
MseI	TTAA	5 cut(s)	275, 803, 1077, 1274, 1314
MslI	CAYNNNNRTG	1 cut(s)	158
MspA1I	CMGCKG	1 cut(s)	1175
MspI	CCGG	1 cut(s)	645
MspR9I	CCNGG	4 cut(s)	66, 645, 646, 719
MunI	CAATTG	1 cut(s)	1149
Mva1269I	GAATGC	2 cut(s)	186, 529
MvaI	CCWGG	2 cut(s)	66, 719
MwoI	GCNNNNNNNGC	4 cut(s)	278, 533, 856, 909
NciI	CCSGG	2 cut(s)	645, 646
NdeII	GATC	4 cut(s)	42, 133, 410, 1109
NlaIII	CATG	5 cut(s)	445, 507, 932, 1462, 1476
NlaIV	GGNNCC	3 cut(s)	995, 1072, 1393
NmeAIII	GCCGAG	1 cut(s)	1451
NmuCI	GTSAC	3 cut(s)	151, 245, 601
NsiI	ATGCAT	1 cut(s)	274
NspI	RCATGY	1 cut(s)	1476
OliI	CACNNNNGTG	1 cut(s)	158
PaeR7I	CTCGAG	1 cut(s)	314
PagI	TCATGA	1 cut(s)	928
PciI	ACATGT	1 cut(s)	1472
PctI	GAATGC	2 cut(s)	186, 529
PfeI	GAWTC	1 cut(s)	460
PflMI	CCANNNNNTGG	1 cut(s)	216
PkrI	GCNGC	4 cut(s)	877, 902, 1143, 1174
PleI	GAGTC	3 cut(s)	217, 1236, 1436
PpsI	GAGTC	3 cut(s)	217, 1236, 1436
PscI	ACATGT	1 cut(s)	1472
Psp6I	CCWGG	2 cut(s)	64, 717
PspGI	CCWGG	2 cut(s)	64, 717
PspN4I	GGNNCC	3 cut(s)	995, 1072, 1393
PspPI	GGNCC	6 cut(s)	101, 279, 1022, 1071, 1199, 1325
PstI	CTGCAG	2 cut(s)	130, 1174
PsuI	RGATCY	1 cut(s)	410
PvuII	CAGCTG	1 cut(s)	1175
RsaI	GTAC	3 cut(s)	886, 1263, 1477
RsaNI	GTAC	3 cut(s)	885, 1262, 1476
RseI	CAYNNNNRTG	1 cut(s)	158
SaqAI	TTAA	5 cut(s)	275, 803, 1077, 1274, 1314
SatI	GCNGC	4 cut(s)	876, 901, 1142, 1173
Sau3AI	GATC	4 cut(s)	42, 133, 410, 1109
Sau96I	GGNCC	6 cut(s)	101, 279, 1022, 1071, 1199, 1325
SchI	GAGTC	3 cut(s)	217, 1237, 1436
ScrFI	CCNGG	4 cut(s)	66, 645, 646, 719
SduI	GDGCHC	1 cut(s)	574
SfaNI	GCATC	3 cut(s)	215, 259, 826
SfcI	CTRYAG	5 cut(s)	126, 165, 1101, 1116, 1170
Sfr274I	CTCGAG	1 cut(s)	314
SinI	GGWCC	1 cut(s)	1199
SlaI	CTCGAG	1 cut(s)	314
SmaI	CCCGGG	1 cut(s)	646
SmiMI	CAYNNNNRTG	1 cut(s)	158
SmlI	CTYRAG	2 cut(s)	314, 626
SmoI	CTYRAG	2 cut(s)	314, 626
SpeI	ACTAGT	1 cut(s)	961
SsiI	CCGC	2 cut(s)	660, 1389
SspMI	CTAG	3 cut(s)	962, 1016, 1528
StyD4I	CCNGG	4 cut(s)	64, 643, 644, 717
TaaI	ACNGT	2 cut(s)	554, 1117
TaiI	ACGT	2 cut(s)	433, 911
TaqI	TCGA	5 cut(s)	315, 366, 846, 1043, 1112
TatI	WGTACW	1 cut(s)	1475
TfiI	GAWTC	1 cut(s)	460
Tru1I	TTAA	5 cut(s)	275, 803, 1077, 1274, 1314
Tru9I	TTAA	5 cut(s)	275, 803, 1077, 1274, 1314
TscAI	CASTG	6 cut(s)	205, 493, 736, 778, 861, 1342
TseFI	GTSAC	3 cut(s)	151, 245, 601
TseI	GCWGC	4 cut(s)	875, 900, 1141, 1172
Tsp45I	GTSAC	3 cut(s)	151, 245, 601
TspDTI	ATGAA	7 cut(s)	42, 64, 714, 917, 945, 1232, 1251
TspGWI	ACGGA	3 cut(s)	71, 170, 1249
TspMI	CCCGGG	1 cut(s)	644
TspRI	CASTG	6 cut(s)	205, 493, 736, 778, 861, 1342
Van91I	CCANNNNNTGG	1 cut(s)	216
VneI	GTGCAC	1 cut(s)	570
VpaK11BI	GGWCC	1 cut(s)	1199
XapI	RAATTY	4 cut(s)	29, 1051, 1220, 1305
XceI	RCATGY	1 cut(s)	1476
XcmI	CCANNNNNNNNNTGG	1 cut(s)	826
XhoI	CTCGAG	1 cut(s)	314
XmaI	CCCGGG	1 cut(s)	644
XspI	CTAG	3 cut(s)	962, 1016, 1528
Zsp2I	ATGCAT	1 cut(s)	274

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.