Rmu_sc0041866.1_g000003

Aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0041866.1
Physical Location & Seq
Forward (+)
4989 .. 8805
3817 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0041866.1_g000003.1.cds

Sequence Viewer

Length: 1488 bp
atgagtttcggcacagaaaaagactatgaatttctggagaagatcggtttggctacggaaaatcctggtgggttcataaatggcaagtggaaggcaactggcccggttatctctactttcaatcctgcagacgatcaggagattgctaaggtcacggaagtgtctatagaggactatgaggagggcattcgtgcttgcagtgaagcatccaagttatggaagactctcacagcaccgaagagaggtgacattgttagacagataggagatgcattaagggccaaattggactatctgggtaggcttgtatccctcgagatggggaaaatacttgctgaaggaattggggaagttcaggaagttatcgatatgtgtgatttttgtgtgggattgagccgtcaactgaatggatctatcataccctcagaacgtccaaatcacatgatgtttgaggtttggaatccattgggaatagttggtgtcatcactgctttcaatttcccatgtgctgttcttggatggaatgcctgcgttgcgcttgtctgtggtaactgtgttgtctggaagggtgcaccaacaactccattggtaactattgctgtgacaaagctaattgccgaggttcttgagaaaaataacttgcccggggctatattcaccgctttctgtggtggagctgaagttggtgaagcattagcaaaagacaacagaatacccctggtttcattcactggaagttcaaaggtgggtcagaaggttcaacgaattgtcagtgagaggtttggtaaatgcttacttgaattaagtgggaacaacgccataattgttatggatgatgctgacatcgagctggcagtgcgttctatattgtttgcagccgttggtactgctggtcagcgctgcacaacatgccgtagattgtatcttcatgaaactatatatcagaatgtattagataaactagtcggactttacaagcaagtcaagattgggaaccctttggagaaaggaactctagttgggccactacatactcaccagtcgaaggagaattttgagaaggggattggggccattaaatctcaggcatgttctggggggaaaattgctgtaggtggatcaactgtaggttcagatggcaattatgtgcagccaacaattgttgagatttctccaactgcagctgtggtgaaagaagagttgtttggtccagttctgtatgttatgaaattcaagagtcttgatgaagcaatagaattgaacaactccgtaccacaaggattaagtagctcaatcttcacaagaaaaccagaaattctctttaaatggattgggccacagggcagtgattgtggtatagtgaatgtaaacattcctactaatggcgctgagattggcggtgcctttggtggagagaaggcaactggtggtggccgagaagcagggagcgactcttggaagcaatacatgagacgctcaacatggtaa

Protein Analysis

495

Amino Acids

53.16

Weight (kDa)

5.83

Isoelectric Point (pI)

30.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1400
AccB7I CCANNNNNTGG 1 cut(s) 216
AciI CCGC 2 cut(s) 660, 1398
AclWI GGATC 2 cut(s) 418, 1126
AcoI YGGCCR 1 cut(s) 1432
AcsI RAATTY 4 cut(s) 29, 1051, 1229, 1314
AcuI CTGAAG 2 cut(s) 357, 699
AfaI GTAC 2 cut(s) 886, 1272
AfeI AGCGCT 1 cut(s) 899
AfiI CCNNNNNNNGG 5 cut(s) 216, 242, 319, 1045, 1382
AgsI TTSAA 7 cut(s) 121, 496, 741, 761, 800, 1234, 1261
AhlI ACTAGT 1 cut(s) 961
AjnI CCWGG 2 cut(s) 64, 717
AjuI GAANNNNNNNTTGG 4 cut(s) 32, 64, 1188, 1220
AleI CACNNNNGTG 1 cut(s) 158
AluBI AGCT 5 cut(s) 610, 677, 850, 1184, 1290
AluI AGCT 5 cut(s) 610, 677, 850, 1184, 1290
Alw21I GWGCWC 1 cut(s) 574
Alw26I GTCTC 1 cut(s) 1465
Alw44I GTGCAC 1 cut(s) 570
AlwI GGATC 2 cut(s) 418, 1126
Ama87I CYCGRG 2 cut(s) 314, 644
Aor51HI AGCGCT 1 cut(s) 899
AoxI GGCC 6 cut(s) 100, 279, 1022, 1071, 1334, 1432
ApaLI GTGCAC 1 cut(s) 570
ApeKI GCWGC 4 cut(s) 875, 900, 1150, 1181
ApoI RAATTY 4 cut(s) 29, 1051, 1229, 1314
AspLEI GCGC 3 cut(s) 538, 900, 1388
AspS9I GGNCC 6 cut(s) 101, 279, 1022, 1071, 1208, 1334
AsuC2I CCSGG 3 cut(s) 104, 645, 646
AsuHPI GGTGA 5 cut(s) 257, 649, 698, 1028, 1201
AvaI CYCGRG 2 cut(s) 314, 644
AvaII GGWCC 1 cut(s) 1208
BaeGI GKGCMC 1 cut(s) 574
BanI GGYRCC 1 cut(s) 1400
BbsI GAAGAC 1 cut(s) 227
Bbv12I GWGCWC 1 cut(s) 574
BbvI GCAGC 4 cut(s) 887, 887, 1162, 1193
BccI CCATC 3 cut(s) 313, 513, 1130
BceAI ACGGC 3 cut(s) 381, 863, 897
BciT130I CCWGG 2 cut(s) 66, 719
BciVI GTATCC 1 cut(s) 319
BcnI CCSGG 3 cut(s) 104, 645, 646
BcoDI GTCTC 1 cut(s) 1465
BcuI ACTAGT 1 cut(s) 961
BfaI CTAG 2 cut(s) 962, 1016
BfmI CTRYAG 5 cut(s) 126, 165, 1110, 1125, 1179
BfoI RGCGCY 2 cut(s) 901, 1389
BfuI GTATCC 1 cut(s) 319
BisI GCNGC 4 cut(s) 876, 901, 1151, 1182
BlsI GCNGC 4 cut(s) 877, 902, 1152, 1183
Bme1390I CCNGG 5 cut(s) 66, 104, 645, 646, 719
Bme18I GGWCC 1 cut(s) 1208
BmeT110I CYCGRG 2 cut(s) 314, 644
BmgT120I GGNCC 6 cut(s) 101, 279, 1022, 1071, 1208, 1334
BmiI GGNNCC 3 cut(s) 995, 1072, 1402
BmrFI CCNGG 5 cut(s) 66, 104, 645, 646, 719
BmsI GCATC 3 cut(s) 215, 259, 826
BpiI GAAGAC 1 cut(s) 227
BpmI CTGGAG 1 cut(s) 56
Bpu10I CCTNAGC 1 cut(s) 147
BpuEI CTTGAG 1 cut(s) 647
BpuMI CCSGG 3 cut(s) 104, 645, 646
Bsa29I ATCGAT 1 cut(s) 366
BsaJI CCNNGG 4 cut(s) 618, 644, 645, 717
BsaXI ACNNNNNCTCC 2 cut(s) 666, 696
Bsc4I CCNNNNNNNGG 5 cut(s) 216, 242, 319, 1045, 1382
Bse1I ACTGG 5 cut(s) 103, 736, 1039, 1211, 1429
BseBI CCWGG 2 cut(s) 66, 719
BseCI ATCGAT 1 cut(s) 366
BseDI CCNNGG 4 cut(s) 618, 644, 645, 717
BseGI GGATG 3 cut(s) 206, 524, 838
BseLI CCNNNNNNNGG 5 cut(s) 216, 242, 319, 1045, 1382
BseMII CTCAG 3 cut(s) 438, 1097, 1380
BseNI ACTGG 5 cut(s) 103, 736, 1039, 1211, 1429
BseRI GAGGAG 1 cut(s) 194
BseSI GKGCMC 1 cut(s) 574
BseXI GCAGC 4 cut(s) 887, 887, 1162, 1193
BsgI GTGCAG 2 cut(s) 886, 1169
BshFI GGCC 6 cut(s) 102, 281, 1024, 1073, 1336, 1434
BshNI GGYRCC 1 cut(s) 1400
BshVI ATCGAT 1 cut(s) 366
BsiHKAI GWGCWC 1 cut(s) 574
BsiHKCI CYCGRG 2 cut(s) 314, 644
BsiSI CCGG 2 cut(s) 104, 645
BslI CCNNNNNNNGG 5 cut(s) 216, 242, 319, 1045, 1382
BsmAI GTCTC 1 cut(s) 1465
BsmBI CGTCTC 1 cut(s) 1465
BsmI GAATGC 2 cut(s) 186, 529
BsnI GGCC 6 cut(s) 102, 281, 1024, 1073, 1336, 1434
BsoBI CYCGRG 2 cut(s) 314, 644
Bsp1286I GDGCHC 1 cut(s) 574
Bsp143I GATC 4 cut(s) 42, 133, 410, 1118
BspACI CCGC 2 cut(s) 660, 1398
BspANI GGCC 6 cut(s) 102, 281, 1024, 1073, 1336, 1434
BspCNI CTCAG 3 cut(s) 437, 1096, 1381
BspDI ATCGAT 1 cut(s) 366
BspHI TCATGA 1 cut(s) 928
BspLI GGNNCC 3 cut(s) 995, 1072, 1402
BspMAI CTGCAG 2 cut(s) 130, 1183
BspPI GGATC 2 cut(s) 418, 1126
BspT107I GGYRCC 1 cut(s) 1400
BsrI ACTGG 5 cut(s) 103, 736, 1039, 1211, 1429
BssECI CCNNGG 4 cut(s) 618, 644, 645, 717
BssMI GATC 4 cut(s) 42, 133, 410, 1118
Bst2UI CCWGG 2 cut(s) 66, 719
Bst4CI ACNGT 2 cut(s) 554, 1126
Bst6I CTCTTC 2 cut(s) 233, 1191
BstAPI GCANNNNNTGC 1 cut(s) 909
BstC8I GCNNGC 3 cut(s) 196, 529, 852
BstDEI CTNAG 4 cut(s) 147, 424, 1083, 1389
BstF5I GGATG 3 cut(s) 206, 524, 838
BstH2I RGCGCY 2 cut(s) 901, 1389
BstHHI GCGC 3 cut(s) 538, 900, 1388
BstKTI GATC 4 cut(s) 45, 136, 413, 1121
BstMAI GTCTC 1 cut(s) 1465
BstMBI GATC 4 cut(s) 42, 133, 410, 1118
BstMWI GCNNNNNNNGC 4 cut(s) 278, 533, 856, 909
BstNI CCWGG 2 cut(s) 66, 719
BstNSI RCATGY 2 cut(s) 912, 1092
BstSCI CCNGG 5 cut(s) 64, 102, 643, 644, 717
BstSFI CTRYAG 5 cut(s) 126, 165, 1110, 1125, 1179
BstSLI GKGCMC 1 cut(s) 574
BstV1I GCAGC 4 cut(s) 887, 887, 1162, 1193
BstV2I GAAGAC 1 cut(s) 227
BstX2I RGATCY 1 cut(s) 410
BstYI RGATCY 1 cut(s) 410
Bsu15I ATCGAT 1 cut(s) 366
BsuI GTATCC 1 cut(s) 319
BsuRI GGCC 6 cut(s) 102, 281, 1024, 1073, 1336, 1434
BsuTUI ATCGAT 1 cut(s) 366
BtsCI GGATG 3 cut(s) 206, 524, 838
BtsI GCAGTG 4 cut(s) 205, 486, 861, 1351
BtsIMutI CAGTG 6 cut(s) 205, 486, 729, 778, 861, 1351
Cac8I GCNNGC 3 cut(s) 196, 529, 852
CciI TCATGA 1 cut(s) 928
CfoI GCGC 3 cut(s) 538, 900, 1388
Cfr13I GGNCC 6 cut(s) 101, 279, 1022, 1071, 1208, 1334
Cfr9I CCCGGG 1 cut(s) 644
ClaI ATCGAT 1 cut(s) 366
CseI GACGC 1 cut(s) 1482
Csp6I GTAC 2 cut(s) 885, 1271
CviAII CATG 7 cut(s) 442, 504, 909, 929, 1089, 1468, 1482
CviQI GTAC 2 cut(s) 885, 1271
DdeI CTNAG 4 cut(s) 147, 424, 1083, 1389
DpnI GATC 4 cut(s) 44, 135, 412, 1120
DpnII GATC 4 cut(s) 42, 133, 410, 1118
DraI TTTAAA 1 cut(s) 1324
EaeI YGGCCR 1 cut(s) 1432
Eam1104I CTCTTC 2 cut(s) 233, 1191
EarI CTCTTC 2 cut(s) 233, 1191
Eco47I GGWCC 1 cut(s) 1208
Eco47III AGCGCT 1 cut(s) 899
Eco57I CTGAAG 2 cut(s) 357, 699
Eco88I CYCGRG 2 cut(s) 314, 644
EcoRII CCWGG 2 cut(s) 64, 717
EcoT22I ATGCAT 1 cut(s) 274
Esp3I CGTCTC 1 cut(s) 1465
FaeI CATG 7 cut(s) 445, 507, 912, 932, 1092, 1471, 1485
FatI CATG 7 cut(s) 441, 503, 908, 928, 1088, 1467, 1481
Fnu4HI GCNGC 4 cut(s) 876, 901, 1151, 1182
FokI GGATG 3 cut(s) 193, 531, 845
Fsp4HI GCNGC 4 cut(s) 876, 901, 1151, 1182
FspBI CTAG 2 cut(s) 962, 1016
GlaI GCGC 3 cut(s) 537, 899, 1387
GluI GCNGC 4 cut(s) 876, 901, 1151, 1182
GsuI CTGGAG 1 cut(s) 56
HaeII RGCGCY 2 cut(s) 901, 1389
HaeIII GGCC 6 cut(s) 102, 281, 1024, 1073, 1336, 1434
HapII CCGG 2 cut(s) 104, 645
HgaI GACGC 1 cut(s) 1482
HhaI GCGC 3 cut(s) 538, 900, 1388
Hin1II CATG 7 cut(s) 445, 507, 912, 932, 1092, 1471, 1485
Hin6I GCGC 3 cut(s) 536, 898, 1386
HinP1I GCGC 3 cut(s) 536, 898, 1386
HincII GTYRAC 1 cut(s) 401
HindII GTYRAC 1 cut(s) 401
HinfI GANTC 4 cut(s) 223, 460, 1237, 1451
HpaII CCGG 2 cut(s) 104, 645
HphI GGTGA 5 cut(s) 257, 649, 698, 1028, 1201
Hpy166II GTNNAC 3 cut(s) 401, 572, 1369
Hpy188I TCNGA 5 cut(s) 427, 753, 945, 968, 1135
Hpy8I GTNNAC 3 cut(s) 401, 572, 1369
HpyAV CCTTC 7 cut(s) 85, 332, 559, 748, 1039, 1054, 1411
HpyCH4III ACNGT 2 cut(s) 554, 1126
HpyCH4IV ACGT 1 cut(s) 430
HpyCH4V TGCA 8 cut(s) 128, 198, 272, 572, 875, 903, 1150, 1181
HpyF10VI GCNNNNNNNGC 4 cut(s) 278, 533, 856, 909
HpyF3I CTNAG 4 cut(s) 147, 424, 1083, 1389
HpySE526I ACGT 1 cut(s) 430
Hsp92II CATG 7 cut(s) 445, 507, 912, 932, 1092, 1471, 1485
HspAI GCGC 3 cut(s) 536, 898, 1386
Kzo9I GATC 4 cut(s) 42, 133, 410, 1118
LmnI GCTCC 2 cut(s) 674, 1446
Lsp1109I GCAGC 4 cut(s) 887, 887, 1162, 1193
LweI GCATC 3 cut(s) 215, 259, 826
MaeI CTAG 2 cut(s) 962, 1016
MaeII ACGT 1 cut(s) 430
MaeIII GTNAC 5 cut(s) 151, 245, 548, 589, 601
MalI GATC 4 cut(s) 44, 135, 412, 1120
MboI GATC 4 cut(s) 42, 133, 410, 1118
MboII GAAGA 6 cut(s) 52, 232, 250, 917, 1208, 1288
MfeI CAATTG 1 cut(s) 1158
MflI RGATCY 1 cut(s) 410
MhlI GDGCHC 1 cut(s) 574
MlyI GAGTC 3 cut(s) 217, 1246, 1445
MmeI TCCRAC 2 cut(s) 946, 1199
MnlI CCTC 9 cut(s) 163, 172, 175, 236, 323, 433, 445, 613, 771
Mph1103I ATGCAT 1 cut(s) 274
MseI TTAA 5 cut(s) 275, 803, 1077, 1283, 1323
MslI CAYNNNNRTG 1 cut(s) 158
MspA1I CMGCKG 1 cut(s) 1184
MspI CCGG 2 cut(s) 104, 645
MspR9I CCNGG 5 cut(s) 66, 104, 645, 646, 719
MunI CAATTG 1 cut(s) 1158
Mva1269I GAATGC 2 cut(s) 186, 529
MvaI CCWGG 2 cut(s) 66, 719
MwoI GCNNNNNNNGC 4 cut(s) 278, 533, 856, 909
NciI CCSGG 3 cut(s) 104, 645, 646
NdeII GATC 4 cut(s) 42, 133, 410, 1118
NlaIII CATG 7 cut(s) 445, 507, 912, 932, 1092, 1471, 1485
NlaIV GGNNCC 3 cut(s) 995, 1072, 1402
NmeAIII GCCGAG 2 cut(s) 643, 1460
NmuCI GTSAC 3 cut(s) 151, 245, 601
NsiI ATGCAT 1 cut(s) 274
NspI RCATGY 2 cut(s) 912, 1092
OliI CACNNNNGTG 1 cut(s) 158
PaeR7I CTCGAG 1 cut(s) 314
PagI TCATGA 1 cut(s) 928
PctI GAATGC 2 cut(s) 186, 529
PfeI GAWTC 1 cut(s) 460
PflMI CCANNNNNTGG 1 cut(s) 216
PkrI GCNGC 4 cut(s) 877, 902, 1152, 1183
PleI GAGTC 3 cut(s) 217, 1245, 1445
PpsI GAGTC 3 cut(s) 217, 1245, 1445
Psp6I CCWGG 2 cut(s) 64, 717
PspGI CCWGG 2 cut(s) 64, 717
PspN4I GGNNCC 3 cut(s) 995, 1072, 1402
PspPI GGNCC 6 cut(s) 101, 279, 1022, 1071, 1208, 1334
PstI CTGCAG 2 cut(s) 130, 1183
PsuI RGATCY 1 cut(s) 410
PvuII CAGCTG 1 cut(s) 1184
RsaI GTAC 2 cut(s) 886, 1272
RsaNI GTAC 2 cut(s) 885, 1271
RseI CAYNNNNRTG 1 cut(s) 158
SaqAI TTAA 5 cut(s) 275, 803, 1077, 1283, 1323
SatI GCNGC 4 cut(s) 876, 901, 1151, 1182
Sau3AI GATC 4 cut(s) 42, 133, 410, 1118
Sau96I GGNCC 6 cut(s) 101, 279, 1022, 1071, 1208, 1334
SchI GAGTC 3 cut(s) 217, 1246, 1445
ScrFI CCNGG 5 cut(s) 66, 104, 645, 646, 719
SduI GDGCHC 1 cut(s) 574
SfaNI GCATC 3 cut(s) 215, 259, 826
SfcI CTRYAG 5 cut(s) 126, 165, 1110, 1125, 1179
Sfr274I CTCGAG 1 cut(s) 314
SinI GGWCC 1 cut(s) 1208
SlaI CTCGAG 1 cut(s) 314
SmaI CCCGGG 1 cut(s) 646
SmiMI CAYNNNNRTG 1 cut(s) 158
SmlI CTYRAG 2 cut(s) 314, 626
SmoI CTYRAG 2 cut(s) 314, 626
SpeI ACTAGT 1 cut(s) 961
SsiI CCGC 2 cut(s) 660, 1398
SspMI CTAG 2 cut(s) 962, 1016
StyD4I CCNGG 5 cut(s) 64, 102, 643, 644, 717
TaaI ACNGT 2 cut(s) 554, 1126
TaiI ACGT 1 cut(s) 433
TaqI TCGA 4 cut(s) 315, 366, 846, 1043
TfiI GAWTC 1 cut(s) 460
Tru1I TTAA 5 cut(s) 275, 803, 1077, 1283, 1323
Tru9I TTAA 5 cut(s) 275, 803, 1077, 1283, 1323
TscAI CASTG 6 cut(s) 205, 493, 736, 778, 861, 1351
TseFI GTSAC 3 cut(s) 151, 245, 601
TseI GCWGC 4 cut(s) 875, 900, 1150, 1181
Tsp45I GTSAC 3 cut(s) 151, 245, 601
TspDTI ATGAA 7 cut(s) 42, 64, 714, 917, 945, 1241, 1260
TspGWI ACGGA 3 cut(s) 71, 170, 1258
TspMI CCCGGG 1 cut(s) 644
TspRI CASTG 6 cut(s) 205, 493, 736, 778, 861, 1351
Van91I CCANNNNNTGG 1 cut(s) 216
VneI GTGCAC 1 cut(s) 570
VpaK11BI GGWCC 1 cut(s) 1208
XapI RAATTY 4 cut(s) 29, 1051, 1229, 1314
XceI RCATGY 2 cut(s) 912, 1092
XcmI CCANNNNNNNNNTGG 1 cut(s) 826
XhoI CTCGAG 1 cut(s) 314
XmaI CCCGGG 1 cut(s) 644
XspI CTAG 2 cut(s) 962, 1016
Zsp2I ATGCAT 1 cut(s) 274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.