Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0008292

Physical Location & Seq

Genomic Coordinates Reverse (-)

35470771 .. 35488468

Gene Structure 17698 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018759

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2796 bp

ATGAACTTGCTGTCAAAAGGGACCAAGAGGGGGACCCTCTACCCATTCAGTCTGGAGCAAAAGCAAGTTCCAGTTTTTTTGCGGGACGACCGCAAAAGGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGAGGCGCACCAACTAAAGAAACAAGAAGACAGAATTGCTTAGTTCCATTCGGGGTTAAGGCACAACCTCGAATCGTAGCTGGTTGTGAAGGGATGGGCGACAGTTATGTCATTCACACCCCAAGTATTTCCAACAAACAGAGCCCTAAGAAAACAAAGAAGAAAAAACGTGGGGGAAGTAAGAAGAAAATGACCACTGAGCAGACTCTGGCTTTCAAGTCTGTGAGTGAGTGGGTTTATTTGGATCAAGCTTCTTCACCAGCTTCCACTGCAGCTTCTTGTGTTGTGGATGATTTTGGGGTTCAGAAGACTCTCGGAAGAGGTGTAGAGAAGGTAGTGTTTGAATTGCATTCACATTCAAAATGCAGTGATGGCTTTCTTTCGCCTTCCAAGTTGGTGGAAAGGGCTCATGGAAATGGGGTGAAAGTTCTTGCTCTGACAGATCATGACACAATGTCTGGCATCCCTGAGGCCCTAGAAGCAGCTCGGAGATTTGGCATGAAGATAATTCCTGGTGTTGAAATCAGTACACTTTTCCAACCAAGTGGAGAGTCTGAACCAGAGGAACCAGTGCACATCCTTGCATATTACAGCAGCTGCGGCCCAACAAGTTTTGAAGAGCTTGAAAAGTTCTTGTCTAGTATAAGGGATGGTCGTTATCTTCGTGCAAAGAATATGGTCTCCAAATTGAACAAGCTTAAGTTTCCTCTTACATGGGAGCATGTTGCAAGGGTTGCAGGCAAGGGAGTCGCTCCTGGGAGATTGCATGTGGCCCGAGCCATGGTTGAAGCCGGTTATGTGGAAAATCTGAAACAAGCTTTTGCTCGCTATCTTTTTGATGGTGGACCTGCATATGCTACGGGAAGTGAACCGCCGACAGAGGATGCAATAAAAATGATATGTGATACGGGAGGTGTGGCTGTGCTAGCTCATCCATGGGCATTGAAAAATACAGTTGCTATCATCAGAAGTTTGAAAGAAGCTGGTCTTCATGGGATGGAAGTTTACAGAAGTGATGGAAAACTGACTGCATACAGTGATCTAGCTGATACTTATGGTCTTCTGAAGCTAGGAGGGTCAGATTACCATGGCAGAGGTGGACAGGGTGAGTCTGAGCTGGGTAGTGTGAACCTTCCAGTTTTGGTTTTGCGTGACTTTCTTAAAGTCGCTCGACCAATTTGGTGTGGTGCCATTAGTCACATATTAGAGAACTATGCTGACGAACCTTCAGATTCAAATCTAGCGAGGATTACAAGGTTTGGGAAGGGAGGTTCTCCTTTAAGCTGCGGCAAGGACATGATTGATCGTTGCTTGTTTTTGTGGTTGACAAATGAAGAGAGGCAAAATGCAGTTTTTGAGGCCATTAAACTGAAGCTTTCTCGTATTTCAATTAATCACGGAGGAAACCAGGTTGCTATAGAGACTGCTGCTGACATTCCAATCATCTTTCTCAGAGTTAACCAAAAGATGGCTGCTGAGCTTGTCAATTCTGCAACAAGTGAGAAACTGAGTGAAATGGATTGGACCAAGAATATTCAAATCTGTGAATTAGTTGCTCATGATAATAGACAAGCTAGAGATGTCATTAAAGCTATCAAGAAACGTCTGGGGAGTAAAAATGCAAATTCTCAACTTTTTGCAGTTTTGTTGCTGGAGATGTTGATGAACAACATTGGAGAACATATTCATAAGCAAGTGATCGAAGTTGGGATTCTTCCTAGTCTAGTGAAGATAGTCAAGAAAAAGTCAGACTTACCAGTGAGGGAGCGCATTTTTCTACTGCTAGATGCGACACAGACATCCCTTGGCGGTGCTTCTGGAAAGTTCCCTCAGTATTATACTGCTTATTACGACTTGGTGAGTGCTGGAATACAGTTCCCTCAAAGGCCTCCTCCGGTCCCTTCAAATTGCCAAGTACCAGAACCAGCTAAGAATAATTTACCTAACAGGGATAACGGGATTGCTCCACGAGTGGAGCCACATGTTGTTCCTGAATCTAGTGTTATTCAGAAGGCTGGTAATGCACTGGAGGTTTTGAAAGATGTCCTTGATGCAGTTGATAGTCAGCATCCAGAGGGGGCAAAAGACGAATTCACACTTGATCTTGTGGAGCAATGTTCTTTCCAAAAGCAAAAAGTTATGCATCTTGTAATGACTTCTCGGGATGAGAAGGTAGTTTCTCAAGCTATCGAATTAAATGAGAAGCTCCAGAAGGTTCTTGCAAGACATGATGCCCTGCTTTCTTGCAATTCTACATCGACTGTGAACCGTCTTATTGAAGAACAGGGAGAGGAGGAAGAAGAAGAGCCAGAACAGCTTGTTCGTAGGCTGCGGAAAGGAAAAGCTTGTGTGAGGCCTGAGGATGAAGAGCAGTCAGCTGAGCATTCCCACTTGGGTTTGCTTGGATCATCCAGGCCTGGGGAAAGGCTCAACCGTCCACTTATACGACCACTTTGCTTGGAGCCATCGCCTGAATCAAATGGACATCCTCCACCTGTTGCTATTCCACCCCCACCTGCAAAGCACATTGAGAGGGAAAGATACTTCCAGGAAACCAAAGTGGATAGCTCTACTTTGGCTGGCCACGTCAGAGGTCTCTCATTACATAGTCGCAATGCAAGTAGCTCTCTCAGTGGAAGTATGGATTTTAGTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHP

Protein Analysis

932

Amino Acids

102.64

Weight (kDa)

9.09

Isoelectric Point (pI)

49.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHP	PF02811	161 - 231	9.3e-13	PHP domain
VHS	PF00790	538 - 645	1e-20	VHS domain
GAT	PF03127	722 - 793	4.5e-10	GAT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008292)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13840
fragaria_vesca	FvH4_1g25470 FvH4_1g25470 FvH4_1g25470 FvH4_1g25470 FvH4_1g25470 FvH4_1g25470 FvH4_1g25470
malus_domestica	MD10G1052200.v1.1
prunus_persica	Prupe.8G062500_v2.0.a1 Prupe.8G062500_v2.0.a1
pyrus_communis	pycom10g03690 pycom15g12500
rosa_chinensis	RchiOBHm_Chr2g0123601
rosa_laevigata	RLG00000018759
rosa_multiflora	Rmu_ssc0000091.1_g000015
rosa_roxburghii	Rroxscaffold_2G00120560
rosa_rugosa	Rorug02G0246400
rosa_samantha	Rh2AG305600 Rh2BG313500 Rh2CG291700 Rh2DG329400
rosa_wichuraiana	Rw2G024480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2662
AasI	GACNNNNNNGTC	1 cut(s)	245
Acc36I	ACCTGC	2 cut(s)	994, 2662
AccB1I	GGYRCC	1 cut(s)	1325
AccB7I	CCANNNNNTGG	1 cut(s)	1606
AciI	CCGC	7 cut(s)	82, 91, 738, 1010, 1425, 1947, 2470
AclWI	GGATC	2 cut(s)	390, 2551
AcoI	YGGCCR	1 cut(s)	2719
AcsI	RAATTY	2 cut(s)	1762, 2228
AcuI	CTGAAG	3 cut(s)	1223, 1350, 1529
AfaI	GTAC	2 cut(s)	667, 2055
AfiI	CCNNNNNNNGG	4 cut(s)	30, 919, 1606, 2556
AflII	CTTAAG	1 cut(s)	836
AflIII	ACRYGT	1 cut(s)	2119
AhdI	GACNNNNNGTC	1 cut(s)	592
AjiI	CACGTC	1 cut(s)	2725
AjnI	CCWGG	6 cut(s)	649, 892, 1545, 2549, 2554, 2685
AloI	GAACNNNNNNTCC	2 cut(s)	1393, 1425
Alw21I	GWGCWC	1 cut(s)	714
Alw26I	GTCTC	3 cut(s)	823, 1553, 2738
Alw44I	GTGCAC	1 cut(s)	710
AlwI	GGATC	2 cut(s)	390, 2551
AlwNI	CAGNNNCTG	2 cut(s)	346, 735
Ama87I	CYCGRG	2 cut(s)	912, 2298
AoxI	GGCC	8 cut(s)	609, 739, 909, 1497, 2024, 2492, 2552, 2719
ApaLI	GTGCAC	1 cut(s)	710
ApeKI	GCWGC	8 cut(s)	410, 620, 732, 735, 1422, 1565, 1610, 2467
ApoI	RAATTY	2 cut(s)	1762, 2228
AseI	ATTAAT	1 cut(s)	1530
Asp700I	GAANNNNTTC	1 cut(s)	1821
AspLEI	GCGC	2 cut(s)	146, 1908
AspS9I	GGNCC	8 cut(s)	21, 33, 610, 740, 910, 983, 1662, 2035
AsuHPI	GGTGA	4 cut(s)	387, 571, 1256, 2008
AsuNHI	GCTAGC	1 cut(s)	1063
AvaI	CYCGRG	2 cut(s)	912, 2298
AvaII	GGWCC	5 cut(s)	21, 33, 983, 1662, 2035
AxyI	CCTNAGG	2 cut(s)	606, 2496
BaeGI	GKGCMC	1 cut(s)	714
BalI	TGGCCA	1 cut(s)	2721
BanI	GGYRCC	1 cut(s)	1325
BanII	GRGCYC	2 cut(s)	284, 547
BauI	CACGAG	1 cut(s)	2106
BbsI	GAAGAC	4 cut(s)	172, 452, 1118, 1190
Bbv12I	GWGCWC	1 cut(s)	714
BbvI	GCAGC	8 cut(s)	422, 632, 722, 744, 1409, 1552, 1597, 2454
BccI	CCATC	8 cut(s)	226, 503, 782, 971, 1129, 1148, 1600, 2611
BcgI	CGANNNNNNTGC	4 cut(s)	868, 902, 2574, 2608
BciT130I	CCWGG	6 cut(s)	651, 894, 1547, 2551, 2556, 2687
BcoDI	GTCTC	3 cut(s)	823, 1553, 2738
BfmI	CTRYAG	2 cut(s)	408, 1554
BfrI	CTTAAG	1 cut(s)	836
BfuAI	ACCTGC	2 cut(s)	994, 2662
BlpI	GCTNAGC	2 cut(s)	1614, 2517
Bme1390I	CCNGG	6 cut(s)	651, 894, 1547, 2551, 2556, 2687
Bme18I	GGWCC	5 cut(s)	21, 33, 983, 1662, 2035
BmeRI	GACNNNNNGTC	1 cut(s)	592
BmeT110I	CYCGRG	2 cut(s)	912, 2298
BmgBI	CACGTC	1 cut(s)	2725
BmgT120I	GGNCC	8 cut(s)	21, 33, 610, 740, 910, 983, 1662, 2035
BmiI	GGNNCC	8 cut(s)	22, 34, 35, 705, 1327, 2037, 2115, 2601
BmrFI	CCNGG	6 cut(s)	651, 894, 1547, 2551, 2556, 2687
BmsI	GCATC	7 cut(s)	609, 1012, 1915, 2179, 2215, 2290, 2359
BmtI	GCTAGC	1 cut(s)	1067
BpiI	GAAGAC	4 cut(s)	172, 452, 1118, 1190
BpmI	CTGGAG	4 cut(s)	74, 1811, 2186, 2330
Bpu1102I	GCTNAGC	2 cut(s)	1614, 2517
BpuEI	CTTGAG	1 cut(s)	2304
BsaBI	GATNNNNATC	1 cut(s)	1374
BsaI	GGTCTC	2 cut(s)	823, 2738
BsaJI	CCNNGG	6 cut(s)	893, 918, 1073, 1225, 1942, 2555
BsaWI	WCCGGW	1 cut(s)	2032
Bsc4I	CCNNNNNNNGG	4 cut(s)	30, 919, 1606, 2556
Bse118I	RCCGGY	1 cut(s)	929
Bse1I	ACTGG	5 cut(s)	71, 707, 1274, 1895, 2169
Bse21I	CCTNAGG	2 cut(s)	606, 2496
Bse3DI	GCAATG	2 cut(s)	2258, 2758
Bse8I	GATNNNNATC	1 cut(s)	1374
BseBI	CCWGG	6 cut(s)	651, 894, 1547, 2551, 2556, 2687
BseDI	CCNNGG	6 cut(s)	893, 918, 1073, 1225, 1942, 2555
BseJI	GATNNNNATC	1 cut(s)	1374
BseLI	CCNNNNNNNGG	4 cut(s)	30, 919, 1606, 2556
BseMI	GCAATG	2 cut(s)	2258, 2758
BseNI	ACTGG	5 cut(s)	71, 707, 1274, 1895, 2169
BseRI	GAGGAG	2 cut(s)	2019, 2444
BseSI	GKGCMC	1 cut(s)	714
BseXI	GCAGC	8 cut(s)	422, 632, 722, 744, 1409, 1552, 1597, 2454
BseYI	CCCAGC	1 cut(s)	1255
Bsh1285I	CGRYCG	1 cut(s)	91
BshFI	GGCC	8 cut(s)	611, 741, 911, 1499, 2026, 2494, 2554, 2721
BshNI	GGYRCC	1 cut(s)	1325
BsiEI	CGRYCG	1 cut(s)	91
BsiHKAI	GWGCWC	1 cut(s)	714
BsiHKCI	CYCGRG	2 cut(s)	912, 2298
BsiSI	CCGG	2 cut(s)	930, 2033
BslFI	GGGAC	4 cut(s)	34, 46, 98, 2021
BslI	CCNNNNNNNGG	4 cut(s)	30, 919, 1606, 2556
BsmAI	GTCTC	3 cut(s)	823, 1553, 2738
BsmFI	GGGAC	4 cut(s)	34, 46, 98, 2021
BsmI	GAATGC	2 cut(s)	487, 2521
BsnI	GGCC	8 cut(s)	611, 741, 911, 1499, 2026, 2494, 2554, 2721
Bso31I	GGTCTC	2 cut(s)	823, 2738
BsoBI	CYCGRG	2 cut(s)	912, 2298
Bsp1286I	GDGCHC	3 cut(s)	284, 547, 714
Bsp143I	GATC	7 cut(s)	382, 580, 1177, 1441, 1836, 2239, 2543
Bsp1720I	GCTNAGC	2 cut(s)	1614, 2517
Bsp19I	CCATGG	3 cut(s)	918, 1073, 1225
BspACI	CCGC	7 cut(s)	82, 91, 738, 1010, 1425, 1947, 2470
BspANI	GGCC	8 cut(s)	611, 741, 911, 1499, 2026, 2494, 2554, 2721
BspHI	TCATGA	2 cut(s)	583, 1696
BspLI	GGNNCC	8 cut(s)	22, 34, 35, 705, 1327, 2037, 2115, 2601
BspMAI	CTGCAG	1 cut(s)	412
BspMI	ACCTGC	2 cut(s)	994, 2662
BspOI	GCTAGC	1 cut(s)	1067
BspPI	GGATC	2 cut(s)	390, 2551
BspQI	GCTCTTC	3 cut(s)	750, 2436, 2499
BspT107I	GGYRCC	1 cut(s)	1325
BspTI	CTTAAG	1 cut(s)	836
BspTNI	GGTCTC	2 cut(s)	823, 2738
BsrDI	GCAATG	2 cut(s)	2258, 2758
BsrFI	RCCGGY	1 cut(s)	929
BsrI	ACTGG	5 cut(s)	71, 707, 1274, 1895, 2169
BssAI	RCCGGY	1 cut(s)	929
BssECI	CCNNGG	6 cut(s)	893, 918, 1073, 1225, 1942, 2555
BssMI	GATC	7 cut(s)	382, 580, 1177, 1441, 1836, 2239, 2543
BssSI	CACGAG	1 cut(s)	2106
BssT1I	CCWWGG	4 cut(s)	918, 1073, 1225, 1942
Bst2BI	CACGAG	1 cut(s)	2106
Bst2UI	CCWGG	6 cut(s)	651, 894, 1547, 2551, 2556, 2687
Bst4CI	ACNGT	7 cut(s)	242, 1093, 1175, 2013, 2401, 2408, 2573
Bst6I	CTCTTC	5 cut(s)	451, 750, 1467, 2436, 2499
BstAFI	CTTAAG	1 cut(s)	836
BstAPI	GCANNNNNTGC	1 cut(s)	872
BstC8I	GCNNGC	4 cut(s)	877, 964, 1065, 2719
BstDSI	CCRYGG	3 cut(s)	918, 1073, 1225
BstHHI	GCGC	2 cut(s)	146, 1908
BstKTI	GATC	7 cut(s)	385, 583, 1180, 1444, 1839, 2242, 2546
BstMAI	GTCTC	3 cut(s)	823, 1553, 2738
BstMBI	GATC	7 cut(s)	382, 580, 1177, 1441, 1836, 2239, 2543
BstMCI	CGRYCG	1 cut(s)	91
BstMWI	GCNNNNNNNGC	8 cut(s)	407, 510, 617, 738, 872, 1064, 2159, 2452
BstNI	CCWGG	6 cut(s)	651, 894, 1547, 2551, 2556, 2687
BstNSI	RCATGY	3 cut(s)	863, 908, 2123
BstSCI	CCNGG	6 cut(s)	649, 892, 1545, 2549, 2554, 2685
BstSFI	CTRYAG	2 cut(s)	408, 1554
BstSLI	GKGCMC	1 cut(s)	714
BstV1I	GCAGC	8 cut(s)	422, 632, 722, 744, 1409, 1552, 1597, 2454
BstV2I	GAAGAC	4 cut(s)	172, 452, 1118, 1190
BstXI	CCANNNNNNTGG	2 cut(s)	535, 683
Bsu36I	CCTNAGG	2 cut(s)	606, 2496
BsuRI	GGCC	8 cut(s)	611, 741, 911, 1499, 2026, 2494, 2554, 2721
BtgI	CCRYGG	3 cut(s)	918, 1073, 1225
BtgZI	GCGATG	1 cut(s)	2589
BtrI	CACGTC	1 cut(s)	2725
BtsI	GCAGTG	2 cut(s)	405, 511
BtsIMutI	CAGTG	8 cut(s)	333, 405, 511, 714, 1180, 1902, 2162, 2776
BveI	ACCTGC	2 cut(s)	994, 2662
Cac8I	GCNNGC	4 cut(s)	877, 964, 1065, 2719
CaiI	CAGNNNCTG	2 cut(s)	346, 735
CciI	TCATGA	2 cut(s)	583, 1696
CfoI	GCGC	2 cut(s)	146, 1908
Cfr10I	RCCGGY	1 cut(s)	929
Cfr13I	GGNCC	8 cut(s)	21, 33, 610, 740, 910, 983, 1662, 2035
CsiI	ACCWGGT	1 cut(s)	1545
Csp6I	GTAC	2 cut(s)	666, 2054
CspCI	CAANNNNNGTGG	2 cut(s)	2577, 2612
CviQI	GTAC	2 cut(s)	666, 2054
DpnI	GATC	7 cut(s)	384, 582, 1179, 1443, 1838, 2241, 2545
DpnII	GATC	7 cut(s)	382, 580, 1177, 1441, 1836, 2239, 2543
DrdI	GACNNNNNNGTC	1 cut(s)	245
DriI	GACNNNNNGTC	1 cut(s)	592
DseDI	GACNNNNNNGTC	1 cut(s)	245
EaeI	YGGCCR	1 cut(s)	2719
Eam1104I	CTCTTC	5 cut(s)	451, 750, 1467, 2436, 2499
Eam1105I	GACNNNNNGTC	1 cut(s)	592
EarI	CTCTTC	5 cut(s)	451, 750, 1467, 2436, 2499
Eco130I	CCWWGG	4 cut(s)	918, 1073, 1225, 1942
Eco147I	AGGCCT	3 cut(s)	2026, 2494, 2554
Eco24I	GRGCYC	2 cut(s)	284, 547
Eco31I	GGTCTC	2 cut(s)	823, 2738
Eco47I	GGWCC	5 cut(s)	21, 33, 983, 1662, 2035
Eco57I	CTGAAG	3 cut(s)	1223, 1350, 1529
Eco81I	CCTNAGG	2 cut(s)	606, 2496
Eco88I	CYCGRG	2 cut(s)	912, 2298
EcoO109I	RGGNCCY	2 cut(s)	33, 610
EcoRI	GAATTC	1 cut(s)	2228
EcoRII	CCWGG	6 cut(s)	649, 892, 1545, 2549, 2554, 2685
EcoT14I	CCWWGG	4 cut(s)	918, 1073, 1225, 1942
EcoT22I	ATGCAT	1 cut(s)	2283
EcoT38I	GRGCYC	2 cut(s)	284, 547
ErhI	CCWWGG	4 cut(s)	918, 1073, 1225, 1942
FalI	AAGNNNNNCTT	6 cut(s)	1110, 1142, 1874, 1906, 2169, 2201
FaqI	GGGAC	4 cut(s)	34, 46, 98, 2021
FauI	CCCGC	1 cut(s)	75
FauNDI	CATATG	1 cut(s)	991
FriOI	GRGCYC	2 cut(s)	284, 547
GlaI	GCGC	2 cut(s)	145, 1907
GsaI	CCCAGC	1 cut(s)	1259
GsuI	CTGGAG	4 cut(s)	74, 1811, 2186, 2330
HaeIII	GGCC	8 cut(s)	611, 741, 911, 1499, 2026, 2494, 2554, 2721
HapII	CCGG	2 cut(s)	930, 2033
HhaI	GCGC	2 cut(s)	146, 1908
Hin6I	GCGC	2 cut(s)	144, 1906
HinP1I	GCGC	2 cut(s)	144, 1906
HincII	GTYRAC	2 cut(s)	1464, 1597
HindII	GTYRAC	2 cut(s)	1464, 1597
HindIII	AAGCTT	5 cut(s)	387, 833, 954, 1511, 2481
HpaI	GTTAAC	1 cut(s)	1597
HpaII	CCGG	2 cut(s)	930, 2033
HphI	GGTGA	4 cut(s)	387, 571, 1256, 2008
HpyCH4III	ACNGT	7 cut(s)	242, 1093, 1175, 2013, 2401, 2408, 2573
HpyCH4IV	ACGT	3 cut(s)	307, 1741, 2724
HpyF10VI	GCNNNNNNNGC	8 cut(s)	407, 510, 617, 738, 872, 1064, 2159, 2452
HpySE526I	ACGT	3 cut(s)	307, 1741, 2724
HspAI	GCGC	2 cut(s)	144, 1906
KflI	GGGWCCC	1 cut(s)	33
KspAI	GTTAAC	1 cut(s)	1597
Kzo9I	GATC	7 cut(s)	382, 580, 1177, 1441, 1836, 2239, 2543
LguI	GCTCTTC	3 cut(s)	750, 2436, 2499
LmnI	GCTCC	9 cut(s)	55, 856, 895, 1903, 2107, 2113, 2248, 2349, 2599
Lsp1109I	GCAGC	8 cut(s)	422, 632, 722, 744, 1409, 1552, 1597, 2454
LweI	GCATC	7 cut(s)	609, 1012, 1915, 2179, 2215, 2290, 2359
MabI	ACCWGGT	1 cut(s)	1545
MaeII	ACGT	3 cut(s)	307, 1741, 2724
MaeIII	GTNAC	3 cut(s)	1289, 1334, 2789
MalI	GATC	7 cut(s)	384, 582, 1179, 1443, 1838, 2241, 2545
MboI	GATC	7 cut(s)	382, 580, 1177, 1441, 1836, 2239, 2543
MhlI	GDGCHC	3 cut(s)	284, 547, 714
MlsI	TGGCCA	1 cut(s)	2721
MluNI	TGGCCA	1 cut(s)	2721
MlyI	GAGTC	5 cut(s)	337, 442, 698, 894, 1256
MmeI	TCCRAC	2 cut(s)	294, 700
Mox20I	TGGCCA	1 cut(s)	2721
Mph1103I	ATGCAT	1 cut(s)	2283
MroXI	GAANNNNTTC	1 cut(s)	1821
MscI	TGGCCA	1 cut(s)	2721
MseI	TTAA	9 cut(s)	195, 837, 1299, 1418, 1503, 1530, 1596, 1725, 2333
MslI	CAYNNNNRTG	1 cut(s)	552
Msp20I	TGGCCA	1 cut(s)	2721
MspA1I	CMGCKG	2 cut(s)	735, 2516
MspCI	CTTAAG	1 cut(s)	836
MspI	CCGG	2 cut(s)	930, 2033
MspR9I	CCNGG	6 cut(s)	651, 894, 1547, 2551, 2556, 2687
Mva1269I	GAATGC	2 cut(s)	487, 2521
MvaI	CCWGG	6 cut(s)	651, 894, 1547, 2551, 2556, 2687
MwoI	GCNNNNNNNGC	8 cut(s)	407, 510, 617, 738, 872, 1064, 2159, 2452
NcoI	CCATGG	3 cut(s)	918, 1073, 1225
NdeI	CATATG	1 cut(s)	991
NdeII	GATC	7 cut(s)	382, 580, 1177, 1441, 1836, 2239, 2543
NheI	GCTAGC	1 cut(s)	1063
NlaIV	GGNNCC	8 cut(s)	22, 34, 35, 705, 1327, 2037, 2115, 2601
NmuCI	GTSAC	3 cut(s)	1289, 1334, 2789
NsiI	ATGCAT	1 cut(s)	2283
NspI	RCATGY	3 cut(s)	863, 908, 2123
PagI	TCATGA	2 cut(s)	583, 1696
PaqCI	CACCTGC	1 cut(s)	2662
PceI	AGGCCT	3 cut(s)	2026, 2494, 2554
PciI	ACATGT	1 cut(s)	2119
PciSI	GCTCTTC	3 cut(s)	750, 2436, 2499
PcsI	WCGNNNNNNNCGW	1 cut(s)	799
PctI	GAATGC	2 cut(s)	487, 2521
PdmI	GAANNNNTTC	1 cut(s)	1821
PfeI	GAWTC	5 cut(s)	210, 1370, 1849, 2132, 2612
PflMI	CCANNNNNTGG	1 cut(s)	1606
PfoI	TCCNGGA	1 cut(s)	2685
PleI	GAGTC	5 cut(s)	337, 442, 697, 893, 1255
PpsI	GAGTC	5 cut(s)	337, 442, 697, 893, 1255
PpuMI	RGGWCCY	1 cut(s)	33
PscI	ACATGT	1 cut(s)	2119
PshBI	ATTAAT	1 cut(s)	1530
Psp5II	RGGWCCY	1 cut(s)	33
Psp6I	CCWGG	6 cut(s)	649, 892, 1545, 2549, 2554, 2685
PspFI	CCCAGC	1 cut(s)	1255
PspGI	CCWGG	6 cut(s)	649, 892, 1545, 2549, 2554, 2685
PspN4I	GGNNCC	8 cut(s)	22, 34, 35, 705, 1327, 2037, 2115, 2601
PspPI	GGNCC	8 cut(s)	21, 33, 610, 740, 910, 983, 1662, 2035
PspPPI	RGGWCCY	1 cut(s)	33
PstI	CTGCAG	1 cut(s)	412
PstNI	CAGNNNCTG	2 cut(s)	346, 735
PvuII	CAGCTG	2 cut(s)	735, 2516
RsaI	GTAC	2 cut(s)	667, 2055
RsaNI	GTAC	2 cut(s)	666, 2054
RseI	CAYNNNNRTG	1 cut(s)	552
SapI	GCTCTTC	3 cut(s)	750, 2436, 2499
SaqAI	TTAA	9 cut(s)	195, 837, 1299, 1418, 1503, 1530, 1596, 1725, 2333
Sau3AI	GATC	7 cut(s)	382, 580, 1177, 1441, 1836, 2239, 2543
Sau96I	GGNCC	8 cut(s)	21, 33, 610, 740, 910, 983, 1662, 2035
SchI	GAGTC	5 cut(s)	337, 442, 698, 894, 1256
ScrFI	CCNGG	6 cut(s)	651, 894, 1547, 2551, 2556, 2687
SduI	GDGCHC	3 cut(s)	284, 547, 714
SexAI	ACCWGGT	1 cut(s)	1545
SfaNI	GCATC	7 cut(s)	609, 1012, 1915, 2179, 2215, 2290, 2359
SfcI	CTRYAG	2 cut(s)	408, 1554
SinI	GGWCC	5 cut(s)	21, 33, 983, 1662, 2035
SmiMI	CAYNNNNRTG	1 cut(s)	552
SmlI	CTYRAG	2 cut(s)	836, 2319
SmoI	CTYRAG	2 cut(s)	836, 2319
SseBI	AGGCCT	3 cut(s)	2026, 2494, 2554
SsiI	CCGC	7 cut(s)	82, 91, 738, 1010, 1425, 1947, 2470
SspI	AATATT	1 cut(s)	1672
StuI	AGGCCT	3 cut(s)	2026, 2494, 2554
StyD4I	CCNGG	6 cut(s)	649, 892, 1545, 2549, 2554, 2685
StyI	CCWWGG	4 cut(s)	918, 1073, 1225, 1942
TaaI	ACNGT	7 cut(s)	242, 1093, 1175, 2013, 2401, 2408, 2573
TaiI	ACGT	3 cut(s)	310, 1744, 2727
TaqI	TCGA	5 cut(s)	208, 1309, 1839, 2328, 2396
TatI	WGTACW	1 cut(s)	665
TauI	GCSGC	2 cut(s)	741, 1428
TfiI	GAWTC	5 cut(s)	210, 1370, 1849, 2132, 2612
Tru1I	TTAA	9 cut(s)	195, 837, 1299, 1418, 1503, 1530, 1596, 1725, 2333
Tru9I	TTAA	9 cut(s)	195, 837, 1299, 1418, 1503, 1530, 1596, 1725, 2333
TscAI	CASTG	8 cut(s)	340, 412, 511, 714, 1180, 1902, 2169, 2776
TseFI	GTSAC	3 cut(s)	1289, 1334, 2789
TseI	GCWGC	8 cut(s)	410, 620, 732, 735, 1422, 1565, 1610, 2467
Tsp45I	GTSAC	3 cut(s)	1289, 1334, 2789
TspDTI	ATGAA	7 cut(s)	17, 653, 1118, 1485, 1814, 1817, 2517
TspGWI	ACGGA	1 cut(s)	1551
TspRI	CASTG	8 cut(s)	340, 412, 511, 714, 1180, 1902, 2169, 2776
Van91I	CCANNNNNTGG	1 cut(s)	1606
Vha464I	CTTAAG	1 cut(s)	836
VneI	GTGCAC	1 cut(s)	710
VpaK11BI	GGWCC	5 cut(s)	21, 33, 983, 1662, 2035
VspI	ATTAAT	1 cut(s)	1530
XapI	RAATTY	2 cut(s)	1762, 2228
XceI	RCATGY	3 cut(s)	863, 908, 2123
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1232
XmnI	GAANNNNTTC	1 cut(s)	1821
Zsp2I	ATGCAT	1 cut(s)	2283

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.